ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3a22 |
|---|---|
| Clone Library Name | barley_pub |
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 259 bits (662), Expect(2) = 1e-75 Identities = 122/127 (96%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 52 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 171 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 172 EGYRIAG 178 Score = 43.9 bits (102), Expect(2) = 1e-75 Identities = 26/51 (50%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYG 183 MAA TMALSSP A+KL+ AS + G GRITMR PWYG Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYG 51
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 254 bits (650), Expect(2) = 1e-74 Identities = 120/126 (95%), Positives = 123/126 (97%) Frame = +3 Query: 189 DRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 368 DRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGC Sbjct: 53 DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGC 112 Query: 369 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 548 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVE Sbjct: 113 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVE 172 Query: 549 GYRVAG 566 GYRVAG Sbjct: 173 GYRVAG 178 Score = 45.1 bits (105), Expect(2) = 1e-74 Identities = 27/51 (52%), Positives = 31/51 (60%), Gaps = 6/51 (11%) Frame = +1 Query: 49 MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYG 183 MAA+TMALSSPA +KL+ GAS V G GR+TMR PWYG Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYG 51
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 259 bits (662), Expect(2) = 2e-74 Identities = 122/127 (96%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 52 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAV Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAV 171 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 172 EGYRVAG 178 Score = 40.0 bits (92), Expect(2) = 2e-74 Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 6/51 (11%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYG 183 MAA TMALSSP A+KL+ A + G GR++MR PWYG Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYG 51
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 255 bits (652), Expect(2) = 3e-74 Identities = 121/126 (96%), Positives = 124/126 (98%) Frame = +3 Query: 189 DRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 368 DRVLYLGPLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC Sbjct: 49 DRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 108 Query: 369 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 548 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVE Sbjct: 109 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVE 168 Query: 549 GYRVAG 566 GYR+AG Sbjct: 169 GYRIAG 174 Score = 43.1 bits (100), Expect(2) = 3e-74 Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 2/47 (4%) Frame = +1 Query: 49 MAATTMALSSPAMKLAGASYVLGGGRITMRXXXX--XXXXXXXPWYG 183 MAA TMALSSPA+ A+ V G GRITMR PWYG Sbjct: 1 MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYG 47
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 259 bits (663), Expect(2) = 8e-74 Identities = 123/127 (96%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 54 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 173 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 174 EGYRVAG 180 Score = 37.4 bits (85), Expect(2) = 8e-74 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 8/53 (15%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLA-GASYVLGGGRITMR--XXXXXXXXXXXPWYG 183 MAA+TMALSSP A+KL+ +S + G G++TMR PWYG Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYG 53
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 259 bits (661), Expect(2) = 1e-73 Identities = 121/127 (95%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 54 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAV Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAV 173 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 174 EGYRIAG 180 Score = 37.7 bits (86), Expect(2) = 1e-73 Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 8/53 (15%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXX--XXXXXXXPWYG 183 MA++TMALSSP A+KL AS ++G GRITMR PWYG Sbjct: 1 MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYG 53
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 259 bits (663), Expect(2) = 2e-73 Identities = 123/127 (96%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 53 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 112 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 113 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 172 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 173 EGYRVAG 179 Score = 35.8 bits (81), Expect(2) = 2e-73 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 7/52 (13%) Frame = +1 Query: 49 MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXX--XXXXXPWYG 183 MAA+T ALSSP A+KL+ +S V G G++TMR PWYG Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYG 52
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 259 bits (663), Expect(2) = 3e-73 Identities = 123/127 (96%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 53 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 112 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 113 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 172 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 173 EGYRVAG 179 Score = 35.4 bits (80), Expect(2) = 3e-73 Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 7/52 (13%) Frame = +1 Query: 49 MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXX--XXXXXPWYG 183 MAA+T ALSSP A+KL+ +S V G G++TMR PWYG Sbjct: 1 MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYG 52
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 255 bits (652), Expect(2) = 2e-72 Identities = 121/126 (96%), Positives = 124/126 (98%) Frame = +3 Query: 189 DRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 368 DRVLYLGPLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC Sbjct: 53 DRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 112 Query: 369 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 548 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVE Sbjct: 113 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVE 172 Query: 549 GYRVAG 566 GYR+AG Sbjct: 173 GYRIAG 178 Score = 37.0 bits (84), Expect(2) = 2e-72 Identities = 23/51 (45%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Frame = +1 Query: 49 MAATTMALSSPAMKLAG---ASYVLGGGRITMRXXXXX---XXXXXXPWYG 183 MAA TMALSSP M A +S + G RITMR PWYG Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYG 51
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 259 bits (661), Expect(2) = 4e-72 Identities = 121/126 (96%), Positives = 125/126 (99%) Frame = +3 Query: 189 DRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 368 DRVLYLGPLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC Sbjct: 54 DRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 113 Query: 369 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 548 VFPELLARNGVKFGEA WFKAGSQIFS+GGLDYLGNPSLVHAQS+LAIWACQVVLMGAVE Sbjct: 114 VFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVE 173 Query: 549 GYRVAG 566 GYR+AG Sbjct: 174 GYRIAG 179 Score = 32.3 bits (72), Expect(2) = 4e-72 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%) Frame = +1 Query: 49 MAATTMALSS-----PAMKLAGASYVLGGGRITMRXXXXXX--XXXXXPWYG 183 MAATTM+LSS A+K +S ++G R+ MR PWYG Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYG 52
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 259 bits (662), Expect(2) = 5e-72 Identities = 122/127 (96%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 54 PDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA+ Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAI 173 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 174 EGYRVAG 180 Score = 31.6 bits (70), Expect(2) = 5e-72 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 8/53 (15%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXX--XXXXXPWYG 183 M A+TMALSSP A+KL+ +S + G G+ MR PWYG Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYG 53
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 254 bits (649), Expect(2) = 7e-72 Identities = 119/127 (93%), Positives = 122/127 (96%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 54 PDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPEL ARNG+KFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 114 CVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 173 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 174 EGYRVAG 180 Score = 36.2 bits (82), Expect(2) = 7e-72 Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 8/53 (15%) Frame = +1 Query: 49 MAATTMALSS-----PAMKL-AGASYVLGGGRITMRXXXXXX--XXXXXPWYG 183 MAATTMALSS A+KL + +S + G G++TMR PWYG Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYG 53
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 258 bits (659), Expect(2) = 7e-72 Identities = 122/127 (96%), Positives = 123/127 (96%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 53 PDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 112 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPEL ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 113 CVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 172 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 173 EGYRVAG 179 Score = 32.3 bits (72), Expect(2) = 7e-72 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 7/52 (13%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXX--XXXXXPWYG 183 MAA TMA+SS A+ + +S + G G+ TMR PWYG Sbjct: 1 MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYG 52
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 256 bits (655), Expect(2) = 9e-72 Identities = 122/127 (96%), Positives = 123/127 (96%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 54 PDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALG 113 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 173 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 174 EGYRVAG 180 Score = 33.5 bits (75), Expect(2) = 9e-72 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 8/53 (15%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXX--XXXXXPWYG 183 MAA TMALSSP A+K + +S + G G+ TMR PWYG Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYG 53
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 257 bits (656), Expect(2) = 9e-72 Identities = 120/127 (94%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 49 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 108 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAV Sbjct: 109 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 168 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 169 EGYRIAG 175 Score = 33.1 bits (74), Expect(2) = 9e-72 Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 5/50 (10%) Frame = +1 Query: 49 MAATTMALSSPAMKLAGASYVLGG---GRITMRXXXX--XXXXXXXPWYG 183 MAA+TMA+SS AM AG +G GRITMR PWYG Sbjct: 1 MAASTMAISSTAM--AGTPIKVGSFGEGRITMRKTVGKPKVAASGSPWYG 48
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 266 bits (679), Expect = 4e-71 Identities = 124/127 (97%), Positives = 127/127 (100%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRVLYLGPLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAV Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV 171 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 172 EGYRIAG 178
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 253 bits (645), Expect(2) = 4e-71 Identities = 118/127 (92%), Positives = 123/127 (96%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 50 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 109 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV Sbjct: 110 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAV 169 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 170 EGYRIAG 176 Score = 35.0 bits (79), Expect(2) = 4e-71 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 5/49 (10%) Frame = +1 Query: 52 AATTMALSSPAMKLAGASYVLGG-----GRITMRXXXXXXXXXXXPWYG 183 AA++MALSSP+ LAG + LG GR++MR PWYG Sbjct: 3 AASSMALSSPS--LAGKAVKLGPSAPEVGRVSMRKTVTKQVSSGSPWYG 49
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 246 bits (629), Expect(2) = 6e-71 Identities = 117/126 (92%), Positives = 121/126 (96%) Frame = +3 Query: 189 DRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 368 DRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC Sbjct: 54 DRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGC 113 Query: 369 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 548 VFPELLARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVE Sbjct: 114 VFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVE 173 Query: 549 GYRVAG 566 GYRVAG Sbjct: 174 GYRVAG 179 Score = 40.8 bits (94), Expect(2) = 6e-71 Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 7/52 (13%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXX-XXXXXXPWYG 183 MAA+TMALSSP A+KL+ AS VLG GR+TMR PWYG Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYG 52
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 250 bits (639), Expect(2) = 1e-70 Identities = 119/127 (93%), Positives = 122/127 (96%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 51 PDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 110 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSIL+IWA QV+LMGAV Sbjct: 111 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAV 170 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 171 EGYRVAG 177 Score = 36.2 bits (82), Expect(2) = 1e-70 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 6/51 (11%) Frame = +1 Query: 49 MAATTMALSSPAM-----KLA-GASYVLGGGRITMRXXXXXXXXXXXPWYG 183 MAA+TMALSSPA+ K+A +S + G GR++MR PWYG Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMR-KTVKAPVSDSPWYG 50
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 246 bits (629), Expect(2) = 2e-70 Identities = 117/126 (92%), Positives = 121/126 (96%) Frame = +3 Query: 189 DRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 368 DRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC Sbjct: 54 DRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGC 113 Query: 369 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 548 VFPELLARNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVE Sbjct: 114 VFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVE 173 Query: 549 GYRVAG 566 GYRVAG Sbjct: 174 GYRVAG 179 Score = 39.3 bits (90), Expect(2) = 2e-70 Identities = 25/52 (48%), Positives = 27/52 (51%), Gaps = 7/52 (13%) Frame = +1 Query: 49 MAATTMALSSPAMK------LAGASYVLGGGRITMRXXXXX-XXXXXXPWYG 183 MAA+TMALSSPA AS VLG GR+TMR PWYG Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYG 52
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 257 bits (657), Expect(2) = 4e-70 Identities = 121/127 (95%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 42 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 101 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 102 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 161 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 162 EGYRIAG 168 Score = 27.3 bits (59), Expect(2) = 4e-70 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Frame = +1 Query: 70 LSSPAMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYG 183 L+ A+KL+ A + G + TMR PWYG Sbjct: 3 LAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYG 41
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 262 bits (669), Expect = 6e-70 Identities = 123/127 (96%), Positives = 126/127 (99%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRVLYLGPLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 52 PDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 111 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+ Sbjct: 112 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAI 171 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 172 EGYRVAG 178
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 261 bits (667), Expect = 1e-69 Identities = 121/127 (95%), Positives = 125/127 (98%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRVLYLGP SGEPPSYL+GEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALG Sbjct: 61 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALG 120 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAV Sbjct: 121 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAV 180 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 181 EGYRIAG 187
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 249 bits (635), Expect(2) = 2e-69 Identities = 117/127 (92%), Positives = 122/127 (96%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALG Sbjct: 55 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALG 114 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAV Sbjct: 115 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 174 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 175 EGYRIAG 181 Score = 33.5 bits (75), Expect(2) = 2e-69 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 9/54 (16%) Frame = +1 Query: 49 MAATTMALSSPAM-------KLAGASYVLGGGRITMRXXXXX--XXXXXXPWYG 183 MAA++MALSSP + +S LGG R TMR PWYG Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYG 54
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 259 bits (663), Expect = 3e-69 Identities = 123/127 (96%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 54 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 173 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 174 EGYRVAG 180
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 259 bits (662), Expect = 4e-69 Identities = 122/127 (96%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 54 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 114 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 173 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 174 EGYRIAG 180
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 255 bits (652), Expect = 5e-68 Identities = 118/127 (92%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRVLYLGP SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 65 PDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLG+P L+HAQSILAIWACQV+LMGA+ Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAI 184 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 185 EGYRVAG 191
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 255 bits (651), Expect = 7e-68 Identities = 120/127 (94%), Positives = 123/127 (96%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 P+RV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 54 PNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFK GSQIFS+GGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 114 CVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 173 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 174 EGYRVAG 180
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 254 bits (650), Expect = 9e-68 Identities = 117/127 (92%), Positives = 124/127 (97%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV+YLGP SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 65 PDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 124 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLG+P L+HAQSILAIWACQV+LMGA+ Sbjct: 125 CVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAI 184 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 185 EGYRVAG 191
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 254 bits (650), Expect = 9e-68 Identities = 120/127 (94%), Positives = 122/127 (96%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 54 PDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 113 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPEL ARNGVKFGEAVW KAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAV Sbjct: 114 CVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAV 173 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 174 EGYRVAG 180
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 241 bits (615), Expect(2) = 2e-67 Identities = 114/126 (90%), Positives = 117/126 (92%) Frame = +3 Query: 189 DRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 368 DRVLYLGPLSG PPSYL+GEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGC Sbjct: 52 DRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGC 111 Query: 369 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 548 VFPELLARNGVKFGE VWFKAGSQIFSEGGL + GNPSLVHAQSILAIWACQVVLMGAVE Sbjct: 112 VFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVE 171 Query: 549 GYRVAG 566 GY VAG Sbjct: 172 GYHVAG 177 Score = 34.7 bits (78), Expect(2) = 2e-67 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = +1 Query: 49 MAATTMALSSPAM---KLAGASYVLGGGRITMRXXXX--XXXXXXXPWYG 183 MAA TMA++S A+ AG V G GRITMR PWYG Sbjct: 1 MAAATMAITSRALVGKPAAGTRDVFGEGRITMRKTAAKPKPARSGSPWYG 50
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 248 bits (634), Expect(2) = 2e-67 Identities = 117/127 (92%), Positives = 121/127 (95%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 32 PDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 91 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEA WFKAGSQIFSEGGLDYLGN SL+HAQSILAIWA QV+LMGAV Sbjct: 92 CVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAV 151 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 152 EGYRIAG 158 Score = 27.3 bits (59), Expect(2) = 2e-67 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +1 Query: 112 LGGGRITMRXXXXXXXXXXXPWYG 183 LG GR++MR PWYG Sbjct: 8 LGVGRVSMRKTASKTVSSGSPWYG 31
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 251 bits (641), Expect = 1e-66 Identities = 118/127 (92%), Positives = 120/127 (94%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALG Sbjct: 53 PDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALG 112 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPEL ARNGVKFGEAVWFKAGSQIF EGGLDYLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 113 CVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 172 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 173 EGYRVAG 179
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 251 bits (640), Expect = 1e-66 Identities = 120/127 (94%), Positives = 121/127 (95%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 51 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALG 110 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFK GSQIFSEGGL YLGNPSLVHAQSILAIWACQVVLMGAV Sbjct: 111 CVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAV 170 Query: 546 EGYRVAG 566 EGYRVAG Sbjct: 171 EGYRVAG 177
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 249 bits (637), Expect = 3e-66 Identities = 118/126 (93%), Positives = 121/126 (96%) Frame = +3 Query: 189 DRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 368 DR LYLGP SG PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC Sbjct: 53 DRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 112 Query: 369 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 548 V PELLA+NGVKFGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQV+LMGAVE Sbjct: 113 VTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVE 172 Query: 549 GYRVAG 566 GYRVAG Sbjct: 173 GYRVAG 178
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 249 bits (635), Expect = 5e-66 Identities = 117/127 (92%), Positives = 122/127 (96%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALG Sbjct: 56 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALG 115 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAV Sbjct: 116 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 175 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 176 EGYRIAG 182
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 248 bits (632), Expect = 1e-65 Identities = 116/127 (91%), Positives = 120/127 (94%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDR YLGP S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 51 PDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 110 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLA+NGVKFGEAVWFKAGSQIF EGGLDYLGNP+LVHAQSILAIWACQVVLMGAV Sbjct: 111 CVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAV 170 Query: 546 EGYRVAG 566 EGYRV G Sbjct: 171 EGYRVGG 177
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 247 bits (631), Expect = 1e-65 Identities = 117/127 (92%), Positives = 121/127 (95%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PD V YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALG Sbjct: 15 PDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 74 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAV Sbjct: 75 CVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV 134 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 135 EGYRIAG 141
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 244 bits (623), Expect = 1e-64 Identities = 113/127 (88%), Positives = 120/127 (94%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDR YLGP S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG Sbjct: 52 PDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 111 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG V Sbjct: 112 CVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFV 171 Query: 546 EGYRVAG 566 EGYRV G Sbjct: 172 EGYRVGG 178
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 241 bits (616), Expect = 8e-64 Identities = 113/133 (84%), Positives = 121/133 (90%) Frame = +3 Query: 168 QPVVRAPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 347 Q + DR YLGP S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWA Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105 Query: 348 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 527 MLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+LVHAQSILAIWACQV Sbjct: 106 MLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQV 165 Query: 528 VLMGAVEGYRVAG 566 VLMG VEGYRV G Sbjct: 166 VLMGFVEGYRVGG 178
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 241 bits (614), Expect = 1e-63 Identities = 113/119 (94%), Positives = 116/119 (97%) Frame = +3 Query: 210 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 389 P SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 390 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 566 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AG Sbjct: 61 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 119
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 220 bits (561), Expect(2) = 2e-63 Identities = 109/127 (85%), Positives = 113/127 (88%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP SGE PSYL+GEF G LSADPETFAKNRELEVIH RWAMLGALG Sbjct: 51 PDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALG 102 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV Sbjct: 103 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAV 162 Query: 546 EGYRVAG 566 EGYR+AG Sbjct: 163 EGYRIAG 169 Score = 42.0 bits (97), Expect(2) = 2e-63 Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 5/50 (10%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYG 183 MAA+TMALSS AMKLA ++ LG GR++MR PWYG Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKTVSSGSPWYG 50
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 237 bits (605), Expect = 2e-62 Identities = 109/127 (85%), Positives = 117/127 (92%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDR YLGP S PSYL+GEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAMLGALG Sbjct: 53 PDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALG 112 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 CVFPELLA+NG+KFGEAVWFKAG+QIFSEGGLDY GNP+L+HAQSILAIWACQVVLMG + Sbjct: 113 CVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLI 172 Query: 546 EGYRVAG 566 EGYRV G Sbjct: 173 EGYRVGG 179
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 237 bits (604), Expect = 2e-62 Identities = 109/133 (81%), Positives = 120/133 (90%) Frame = +3 Query: 168 QPVVRAPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 347 Q + DR YLGP S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWA Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105 Query: 348 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 527 MLGALGCVFPE+L++NGVKFGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILA+WA QV Sbjct: 106 MLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQV 165 Query: 528 VLMGAVEGYRVAG 566 VLMG +EGYRV G Sbjct: 166 VLMGLIEGYRVGG 178
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 236 bits (601), Expect = 4e-62 Identities = 111/133 (83%), Positives = 120/133 (90%) Frame = +3 Query: 168 QPVVRAPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 347 Q + PDR YLGP S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWA Sbjct: 44 QSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103 Query: 348 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 527 MLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QV Sbjct: 104 MLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQV 163 Query: 528 VLMGAVEGYRVAG 566 VLMG VEGYRV G Sbjct: 164 VLMGFVEGYRVGG 176
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 236 bits (601), Expect = 4e-62 Identities = 111/126 (88%), Positives = 119/126 (94%) Frame = +3 Query: 189 DRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 368 DR +LGP SGE PSYL+GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC Sbjct: 56 DRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGC 115 Query: 369 VFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 548 + PELLA++GVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE Sbjct: 116 LTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVE 175 Query: 549 GYRVAG 566 GYRVAG Sbjct: 176 GYRVAG 181 Score = 30.0 bits (66), Expect = 4.8 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%) Frame = +3 Query: 207 GPLSGE--PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 380 GPL GE P Y G F D GL+ DP+TFA+ + E+ + R AM G Sbjct: 182 GPL-GEVTDPIYPGGSF------DPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQA 234 Query: 381 LLARNG 398 ++ G Sbjct: 235 IVTGKG 240
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 235 bits (600), Expect = 6e-62 Identities = 110/133 (82%), Positives = 119/133 (89%) Frame = +3 Query: 168 QPVVRAPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 347 Q + DR YLGP S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWA Sbjct: 46 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105 Query: 348 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 527 MLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QV Sbjct: 106 MLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQV 165 Query: 528 VLMGAVEGYRVAG 566 VLMG VEGYRV G Sbjct: 166 VLMGFVEGYRVGG 178
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 235 bits (599), Expect = 7e-62 Identities = 110/133 (82%), Positives = 119/133 (89%) Frame = +3 Query: 168 QPVVRAPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 347 Q + DR YLGP S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWA Sbjct: 18 QSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 77 Query: 348 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 527 MLGALGCVFPE+L++NGV FGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWA QV Sbjct: 78 MLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQV 137 Query: 528 VLMGAVEGYRVAG 566 VLMG VEGYRV G Sbjct: 138 VLMGFVEGYRVGG 150
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 232 bits (592), Expect = 5e-61 Identities = 109/127 (85%), Positives = 116/127 (91%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDR YLGP S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALG Sbjct: 52 PDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALG 111 Query: 366 CVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 545 C FPELL +NGVKFGEAVWFKAGSQIF+EGGLDYLGNP+L+HAQSILAIWA QVVLMG V Sbjct: 112 CTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFV 171 Query: 546 EGYRVAG 566 EGYRV G Sbjct: 172 EGYRVGG 178
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 231 bits (589), Expect = 1e-60 Identities = 108/133 (81%), Positives = 119/133 (89%) Frame = +3 Query: 168 QPVVRAPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 347 Q + DR +LGP S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWA Sbjct: 45 QSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 104 Query: 348 MLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV 527 MLGALGC+FPELL++NGV+FGEAVWFKAG+QIFSEGGLDYLGNP+LVHAQSILAIWA QV Sbjct: 105 MLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQV 164 Query: 528 VLMGAVEGYRVAG 566 VLMG +EGYRV G Sbjct: 165 VLMGLIEGYRVGG 177
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 213 bits (541), Expect = 4e-55 Identities = 103/124 (83%), Positives = 110/124 (88%) Frame = +3 Query: 192 RVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 371 RV YLGP SGE PSYL+GEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+ Sbjct: 58 RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117 Query: 372 FPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG 551 FPELL+ G FGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIW +V+LMGAVEG Sbjct: 118 FPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEG 177 Query: 552 YRVA 563 YR+A Sbjct: 178 YRIA 181
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 207 bits (528), Expect = 1e-53 Identities = 100/128 (78%), Positives = 111/128 (86%), Gaps = 1/128 (0%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALG Sbjct: 53 PDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALG 112 Query: 366 CVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 542 CVFPE+L + GV+F E VWFKAGSQIFSEGGLDYLGNP+LVHAQSILA+ QV+LMG Sbjct: 113 CVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGL 172 Query: 543 VEGYRVAG 566 VEG+R+ G Sbjct: 173 VEGFRING 180 Score = 31.6 bits (70), Expect = 1.6 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%) Frame = +3 Query: 159 HLQQPVVRAPDRVLYLGPLSGEPPSYLSGE------FPGDYGWDTAGLSADPETFAKNRE 320 H Q + +VL +G + G + L G +PG +D GL+ DP TFA+ + Sbjct: 155 HAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV 214 Query: 321 LEVIHCRWAMLGALGCVFPELLARNG 398 E+ + R AM G ++ G Sbjct: 215 KEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 204 bits (520), Expect = 1e-52 Identities = 99/128 (77%), Positives = 109/128 (85%), Gaps = 1/128 (0%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALG Sbjct: 50 PDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALG 109 Query: 366 CVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 542 C+FPE+L + V F E VWFKAGSQIFS+GGLDYLGNP+LVHAQSILA+ QVVLMG Sbjct: 110 CIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGL 169 Query: 543 VEGYRVAG 566 VEG+R+ G Sbjct: 170 VEGFRING 177 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +3 Query: 249 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 398 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 203 bits (516), Expect = 3e-52 Identities = 97/128 (75%), Positives = 110/128 (85%), Gaps = 1/128 (0%) Frame = +3 Query: 186 PDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 362 P+R +LGP S P+YL+GEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGAL Sbjct: 39 PNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGAL 98 Query: 363 GCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 542 GC PELLA++G KFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQ+I+A A QV+LMG Sbjct: 99 GCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGL 158 Query: 543 VEGYRVAG 566 +EGYRV G Sbjct: 159 IEGYRVNG 166 Score = 29.3 bits (64), Expect = 8.1 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 6/86 (6%) Frame = +3 Query: 159 HLQQPVVRAPDRVLYLGPLSG------EPPSYLSGEFPGDYGWDTAGLSADPETFAKNRE 320 H Q V + +V+ +G + G L +PG+ +D GL+ DP+TFA+ + Sbjct: 141 HAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGE-SFDPLGLADDPDTFAELKV 199 Query: 321 LEVIHCRWAMLGALGCVFPELLARNG 398 E+ + R A G ++ G Sbjct: 200 KEIKNGRLASFSMFGFFVQAIVTGKG 225
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 197 bits (500), Expect = 2e-50 Identities = 95/128 (74%), Positives = 108/128 (84%), Gaps = 1/128 (0%) Frame = +3 Query: 186 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 PDR +LGP S P+YL+GEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG Sbjct: 42 PDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALG 101 Query: 366 CVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 542 + PELL+ GVKFGE VWFKAG+QIFSEGGLDYLG+P+L+HAQ+I+A A QVVLMG Sbjct: 102 ILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGL 161 Query: 543 VEGYRVAG 566 +EGYRV G Sbjct: 162 IEGYRVNG 169 Score = 30.8 bits (68), Expect = 2.8 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 249 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 398 +PG+ +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 183 bits (464), Expect = 3e-46 Identities = 88/129 (68%), Positives = 106/129 (82%), Gaps = 2/129 (1%) Frame = +3 Query: 186 PDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 362 PDR +LGP S + P YL+GEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGAL Sbjct: 36 PDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGAL 95 Query: 363 GCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMG 539 G + PELL++ GV+FGE VWFKAG+QIF++GGL+YLGN SL+HAQSI+A A QVVLMG Sbjct: 96 GILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMG 155 Query: 540 AVEGYRVAG 566 E YR G Sbjct: 156 LAEAYRANG 164 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +3 Query: 249 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 398 +PG +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 164 bits (415), Expect = 2e-40 Identities = 82/120 (68%), Positives = 97/120 (80%), Gaps = 2/120 (1%) Frame = +3 Query: 213 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA- 389 L + P +GEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA Sbjct: 68 LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLAD 127 Query: 390 RNGVKFGE-AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 566 +G+KFG+ A+WFKAG+ IF +GGL+YLGNPSL+HAQ+I+A A QVVLMG VEGYRV G Sbjct: 128 EDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNG 187 Score = 32.3 bits (72), Expect = 0.96 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +3 Query: 249 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 398 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 120 bits (302), Expect = 2e-27 Identities = 55/63 (87%), Positives = 60/63 (95%) Frame = +3 Query: 378 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 557 ELL +NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYR 60 Query: 558 VAG 566 V G Sbjct: 61 VGG 63
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 102 bits (254), Expect = 8e-22 Identities = 60/129 (46%), Positives = 77/129 (59%), Gaps = 4/129 (3%) Frame = +3 Query: 186 PDRVLYL--GPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 356 PDR ++L G L E P YL+GE GDYG+D GL PE FAK + E+IH RWAMLG Sbjct: 65 PDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLG 124 Query: 357 ALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL 533 A G + PE L + G G EAVWFK G+ + L+Y G + +LA+ A +VVL Sbjct: 125 AAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVL 181 Query: 534 MGAVEGYRV 560 +G E YR+ Sbjct: 182 LGGAEYYRI 190
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 85.5 bits (210), Expect = 1e-16 Identities = 48/130 (36%), Positives = 70/130 (53%) Frame = +3 Query: 174 VVRAPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 353 V PDR L+ PP +L G PGD+G+D GL++DPE+ N++ E++HCRWAML Sbjct: 59 VAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAML 116 Query: 354 GALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL 533 GA G PELL + G+ W+ AG Q +Y + + ++ ++VL Sbjct: 117 GAAGIFIPELLTKIGI-LNTPSWYTAGEQ-------EYFTDTT--------TLFIVELVL 160 Query: 534 MGAVEGYRVA 563 +G EG R A Sbjct: 161 IGWAEGRRWA 170
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 80.1 bits (196), Expect = 4e-15 Identities = 47/130 (36%), Positives = 66/130 (50%) Frame = +3 Query: 174 VVRAPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 353 V PDR L+ PP +L G PGD+G+D GL +DPE+ N + E++H RWAML Sbjct: 59 VAADPDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAML 116 Query: 354 GALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVL 533 GA G PE L + GV W+ AG Q +Y + + ++ ++VL Sbjct: 117 GAAGIFIPEFLTKIGV-LNTPSWYTAGEQ-------EYFTDTT--------TLFVIELVL 160 Query: 534 MGAVEGYRVA 563 +G EG R A Sbjct: 161 IGWAEGRRWA 170
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 77.0 bits (188), Expect = 3e-14 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 16/111 (14%) Frame = +3 Query: 159 HLQQPVVR-APDRVLYLGPLS---------------GEPPSYLSGEFPGDYGWDTAGLSA 290 HLQQP+ R D +++ P++ EPP+ L+GE+P D G+D L+A Sbjct: 158 HLQQPLQRNIADSIMHQWPVAMFASSGHKDGLWFPNAEPPALLTGEYPADRGFDPLNLAA 217 Query: 291 DPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 443 DP+ +A+ R EV H R AML +GC+ PELL G+ WF+AG + Sbjct: 218 DPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-------GKGAWFEAGDSV 261 Score = 70.9 bits (172), Expect = 2e-12 Identities = 34/73 (46%), Positives = 45/73 (61%) Frame = +3 Query: 225 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 404 PP YL+GE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 433 Query: 405 FGEAVWFKAGSQI 443 G WF+ ++ Sbjct: 434 -GNGAWFQIWDKV 445 Score = 64.3 bits (155), Expect = 2e-10 Identities = 31/68 (45%), Positives = 45/68 (66%) Frame = +3 Query: 228 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 407 PS+L+GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64 Query: 408 GEAVWFKA 431 G+ +W++A Sbjct: 65 GKGIWYEA 72
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 72.0 bits (175), Expect = 1e-12 Identities = 34/36 (94%), Positives = 35/36 (97%) Frame = +3 Query: 459 LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 566 LDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAG Sbjct: 1 LDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 36
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 69.7 bits (169), Expect = 5e-12 Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 2/91 (2%) Frame = +3 Query: 213 LSGEP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 389 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL- 108 Query: 390 RNGVKFGEAVWFKAGSQIFSEGG-LDYLGNP 479 G W KA GG YLG P Sbjct: 109 ------GLGNWVKAQEWAAIPGGQATYLGQP 133
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 66.2 bits (160), Expect = 6e-11 Identities = 29/74 (39%), Positives = 46/74 (62%) Frame = +3 Query: 222 EPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 401 +PP++L+GE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 221 Query: 402 KFGEAVWFKAGSQI 443 G+ WF+ G+ + Sbjct: 222 --GKGAWFEVGNSV 233 Score = 38.5 bits (88), Expect = 0.013 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +3 Query: 294 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 443 P + + R EV + R AML +GCV+PELL G VWF+ +++ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFEVWNKV 43
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 61.2 bits (147), Expect = 2e-09 Identities = 38/110 (34%), Positives = 49/110 (44%) Frame = +3 Query: 228 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 407 P +L G PGDYG+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 408 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 557 WF+AG+ +P + S + Q++LMG VE R Sbjct: 121 SGIPWFEAGA------------DPGAIAPFSFGTLLGTQLILMGWVESKR 158
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 60.8 bits (146), Expect = 3e-09 Identities = 40/110 (36%), Positives = 52/110 (47%) Frame = +3 Query: 228 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 407 P +L G PGD+G+D GL DP RE E+IH RWAML LG + A G+ Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQ--AWTGIP- 129 Query: 408 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 557 WF+AG+ +P V S + Q++LMG VE R Sbjct: 130 ----WFEAGA------------DPGAVAPFSFGTLLGTQLLLMGWVESKR 163
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 60.5 bits (145), Expect = 3e-09 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = +3 Query: 480 SLVHAQSILAIWACQVVLMGAVEGYRVAG 566 SLVHAQSILAIWACQVVLMGAVEGYR+AG Sbjct: 1 SLVHAQSILAIWACQVVLMGAVEGYRIAG 29
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 60.5 bits (145), Expect = 3e-09 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = +3 Query: 480 SLVHAQSILAIWACQVVLMGAVEGYRVAG 566 SLVHAQSILAIWACQVVLMGAVEGYR+AG Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAG 178 Score = 38.9 bits (89), Expect = 0.010 Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 177 MAA TMALSSP A+KL+ AS + G GRITMR PW Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPW 49
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 60.5 bits (145), Expect = 3e-09 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = +3 Query: 480 SLVHAQSILAIWACQVVLMGAVEGYRVAG 566 SLVHAQSILAIWACQVVLMGAVEGYR+AG Sbjct: 150 SLVHAQSILAIWACQVVLMGAVEGYRIAG 178 Score = 34.7 bits (78), Expect = 0.19 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +1 Query: 49 MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 177 MAA MALSSP A+KL+ AS G GRITMR PW Sbjct: 1 MAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRKAVAKSAPSSSPW 49
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 60.5 bits (145), Expect = 3e-09 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = +3 Query: 480 SLVHAQSILAIWACQVVLMGAVEGYRVAG 566 SLVHAQSILAIWACQVVLMGAVEGYR+AG Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAG 180
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 60.5 bits (145), Expect = 3e-09 Identities = 28/29 (96%), Positives = 29/29 (100%) Frame = +3 Query: 480 SLVHAQSILAIWACQVVLMGAVEGYRVAG 566 SLVHAQSILAIWACQVVLMGAVEGYR+AG Sbjct: 152 SLVHAQSILAIWACQVVLMGAVEGYRIAG 180 Score = 30.0 bits (66), Expect = 4.8 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 6/36 (16%) Frame = +1 Query: 49 MAATTMALSSPA-----MKLA-GASYVLGGGRITMR 138 MAA+TMALSS +KLA +S + G GRITMR Sbjct: 1 MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMR 36
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 59.3 bits (142), Expect = 7e-09 Identities = 37/110 (33%), Positives = 50/110 (45%) Frame = +3 Query: 228 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 407 P +L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 408 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 557 WF+AG+ +P + S ++ Q++LMG VE R Sbjct: 121 SGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKR 158
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 58.5 bits (140), Expect = 1e-08 Identities = 27/71 (38%), Positives = 40/71 (56%) Frame = +3 Query: 228 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 407 P YL+G GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-I 122 Query: 408 GEAVWFKAGSQ 440 W+ AG + Sbjct: 123 NVPEWYDAGKE 133
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 56.6 bits (135), Expect = 5e-08 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 8/96 (8%) Frame = +3 Query: 171 PVVRAPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVI 332 PV + +R L+ S + SYL G PGD+G+D GLS DPE F + + L EVI Sbjct: 46 PVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVI 102 Query: 333 HCRWAMLGALGCVFPELLARNGVKFGEA--VWFKAG 434 + R+AMLGA G + PE+L + G+ E WF+ G Sbjct: 103 NGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTG 138
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 43.1 bits (100), Expect = 5e-04 Identities = 46/155 (29%), Positives = 57/155 (36%), Gaps = 43/155 (27%) Frame = +3 Query: 228 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 314 P YL G GDYG+D GL E AKN Sbjct: 62 PEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPF 121 Query: 315 ------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGG 458 RE E+IH RWAML LG + E L GV W AG +G Sbjct: 122 QPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL--TGV-----TWQDAGKVELVDGS 174 Query: 459 LDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 563 YLG P ++ IW +V+++G +E R A Sbjct: 175 -SYLGQPLPFSISTL--IW-IEVLVIGYIEFQRNA 205 Score = 33.9 bits (76), Expect = 0.33 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +3 Query: 195 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 42.7 bits (99), Expect = 7e-04 Identities = 45/154 (29%), Positives = 57/154 (37%), Gaps = 43/154 (27%) Frame = +3 Query: 225 PPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 314 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 315 -------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG 455 RE E+IH RWAMLG LG + E L G+ W AG EG Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL--TGI-----AWQDAGKVELVEG 177 Query: 456 GLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 557 YLG P ++ IW +V+++G +E R Sbjct: 178 S-SYLGQPLPFSLTTL--IW-IEVLVVGYIEFQR 207 Score = 31.2 bits (69), Expect = 2.1 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +3 Query: 195 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 362 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/26 (73%), Positives = 24/26 (92%) Frame = +3 Query: 480 SLVHAQSILAIWACQVVLMGAVEGYR 557 +L+HA+S+LAI A QV+LMGAVEGYR Sbjct: 4 ALIHAKSLLAILATQVLLMGAVEGYR 29
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 41.6 bits (96), Expect = 0.002 Identities = 46/155 (29%), Positives = 55/155 (35%), Gaps = 45/155 (29%) Frame = +3 Query: 228 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 314 P +L G PGD G+D GLS E AKN Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118 Query: 315 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 452 RE E+IH RWAML LG + E A GV W +AG Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVS-----WVEAGK--VEL 169 Query: 453 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR 557 G Y G L SI + +V+L+G E YR Sbjct: 170 DGASYAG---LSLPFSITQLIWIEVILVGGAEFYR 201
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 41.2 bits (95), Expect = 0.002 Identities = 51/169 (30%), Positives = 64/169 (37%), Gaps = 44/169 (26%) Frame = +3 Query: 189 DRVL-YLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------ 314 DR L Y G +S P +L G GDYG+D GL E AKN Sbjct: 54 DRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVI 110 Query: 315 --------------------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 416 RE E+IH RWAML LG + E L GV Sbjct: 111 GTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL--TGV----- 163 Query: 417 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 563 W AG +G YLG P ++ IW +V+++G +E R A Sbjct: 164 TWQDAGKVELVDGS-SYLGQPLPFSISTL--IW-IEVLVIGYIEFQRNA 208 Score = 35.8 bits (81), Expect = 0.087 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +3 Query: 195 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 365 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 40.0 bits (92), Expect = 0.005 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Frame = +3 Query: 204 LGPLSGEPPSYL-SGEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 377 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 378 ELLARN--GVKFGEAVW 422 E ++ + G +G+A + Sbjct: 192 EAVSGDTWGTYWGDATF 208
>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa| SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein) Length = 3160 Score = 34.7 bits (78), Expect = 0.19 Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 23/131 (17%) Frame = -3 Query: 565 PATRYPSTAPMSTTWQAQMARMLCAWTKLGLPR*SRPPSLKIWEPALNQTASPNLTP--- 395 P P+ A S AQ +++ A T+L +P ++ P++ I P +Q P P Sbjct: 598 PPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPIPAPPSSQLPIPPSQPAQL 657 Query: 394 -LRASSSGKTQPSAPSMAQ-------------------RQWITSSSRFLAKVSGSAESPA 275 L + GK Q A ++ R TSS+ LA VSGS P+ Sbjct: 658 ALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPS 717 Query: 274 VSQP*SPGNSP 242 ++ SP N P Sbjct: 718 PARS-SPVNRP 727
>ENPP_BPT7 (P03803) Probable endopeptidase (EC 3.4.-.-)| Length = 143 Score = 33.5 bits (75), Expect = 0.43 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 6/62 (9%) Frame = -2 Query: 566 TSNAVPLDSA-HEHDLASPDGK-----DALRVDQARIAEVVEATLAEDLGAGLEPDGLAE 405 T A+ SA ++ DLA+ +G LR D R+ V+ T D G EPDG AE Sbjct: 51 TQRAIDAVSAKYQEDLAALEGSTDRIISDLRSDNKRLRVRVKTTGTSDGQCGFEPDGRAE 110 Query: 404 LD 399 LD Sbjct: 111 LD 112
>SYC_XYLFA (Q9PEN3) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 467 Score = 33.1 bits (74), Expect = 0.56 Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = -2 Query: 464 VEATLAEDLGAGLEPDGLAELDTVASE---QLGEDAAERAEHGPAAMDHLQLTVLGEGL 297 +EA L +DL P LAEL T+A+E QL + A AA+ L+ +LG GL Sbjct: 340 IEAALDDDLNT---PQALAELATLANEARIQLADTTHHAAAEVTAALTRLKAELLGAGL 395
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 32.7 bits (73), Expect = 0.73 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 14/100 (14%) Frame = -3 Query: 478 GLPR*SRPPSLKIWEPALNQTASPNL-------------TPLRASSSGKTQPSAPSMAQR 338 G P PP+ K+ EP++ ++A +L TP+ SS +Q ++P A Sbjct: 311 GNPNAVLPPTAKLTEPSVEKSALGSLCKTVSQIGQAQSTTPVTTPSSRPSQLASPPPASN 370 Query: 337 -QWITSSSRFLAKVSGSAESPAVSQP*SPGNSPLR*LGGS 221 I+SSS A S S+ S S S +SP L G+ Sbjct: 371 ASTISSSSSTAASCSASSSSGCSSAASSLNSSPSSRLAGA 410
>HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 304 Score = 32.7 bits (73), Expect = 0.73 Identities = 22/55 (40%), Positives = 25/55 (45%) Frame = -2 Query: 431 GLEPDGLAELDTVASEQLGEDAAERAEHGPAAMDHLQLTVLGEGLRVSREPRGVP 267 GL DG+ +L V +L E AAER HG A H V G G R VP Sbjct: 66 GLIADGVCDLGIVGQNELEEQAAERRRHGLPAAYH---AVRGVGFGQCRLMLAVP 117
>RECA_STRVL (P48295) Protein recA (Recombinase A)| Length = 377 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = -2 Query: 488 DQARIAEVVEATLAEDLGAGLEPDGL---AELDTVASEQLGEDAAERAEHGPAA 336 D +A+ +E + E LG G+ PD A D A++ G D A ++ PA+ Sbjct: 311 DNPDLADEIERKIKEKLGVGVRPDAAKAEAATDAAAADTAGTDDAAKSVPAPAS 364
>H1T_MOUSE (Q07133) Histone H1t (Testicular H1 histone)| Length = 207 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -3 Query: 484 KLGLPR*SRPPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMAQRQ 335 K+GLPR SR P P TP +AS SG+ A + QR+ Sbjct: 131 KMGLPRASRSPK----SSKTKAVKKPKATPTKASGSGRKTKGAKGVQQRK 176
>SYC_XYLFT (Q87EL7) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 467 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Frame = -2 Query: 464 VEATLAEDLGAGLEPDGLAELDTVASE---QLGEDAAERAEHGPAAMDHLQLTVLGEGL 297 +EA L +DL P LAEL T+A+E QL + A A+ L+ +LG GL Sbjct: 340 IEAALDDDLNT---PQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGL 395
>FA53C_HUMAN (Q9NYF3) Protein FAM53C| Length = 392 Score = 31.2 bits (69), Expect = 2.1 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 8/93 (8%) Frame = -3 Query: 463 SRPPSLKIWEPALNQTASPNLTPLR-ASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSA 287 S P L W+P S TP++ S G P P + + + SS RFL S S+ Sbjct: 122 SVPVDLSRWQPVWRPAPSKLWTPIKHRGSGGGGGPQVPHQSPPKRV-SSLRFLQAPSASS 180 Query: 286 ESPAVSQP*SP-------GNSPLR*LGGSPESG 209 + +P SP R SP+SG Sbjct: 181 QCAPAHRPYSPPFFSLALAQDSSRPCAASPQSG 213
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 31.2 bits (69), Expect = 2.1 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = -3 Query: 430 ALNQTASPNLTP----LRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP 263 A++ T +P +TP + +S PSAP+M+ + +S+S + S PAVSQ Sbjct: 399 AMSSTGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSSTSGSVMYPSLPTSLPAVSQ- 457 Query: 262 *SPGNSPLR*LGGSPESGPR 203 G S LG S ES R Sbjct: 458 -GFGQSTTTTLGPSFESNER 476
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 30.8 bits (68), Expect = 2.8 Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 11/138 (7%) Frame = -2 Query: 557 AVPLDSAHEHDLASPDGKDALRVDQARIAEVVEATLAEDLGAGL---EPDGLAEL---DT 396 AV DS S G+DA+RVDQAR + + +L + GA L E G ++ T Sbjct: 807 AVGADSLGSDGAISVSGRDAVRVDQAR--SLADISLGAEGGATLGAVEAAGSIDVRGGST 864 Query: 395 VASEQLGEDAAERAEHGPAAMDHLQLTVLGEGLRVSR-EPRGVPAVIAR-ELAAEVARGL 222 VA+ L + R A + G GL VS + AV AR LA + G+ Sbjct: 865 VAANSLHANRDVRVSGKDAV--RVTAATSGGGLHVSSGRQLDLGAVQARGALALDGGAGV 922 Query: 221 AGERAEVE---HAVGGPY 177 A + A+ H GG + Sbjct: 923 ALQSAKASGTLHVQGGEH 940
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 457 PPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMA 344 PP+ P T+SP+ T ++SS+ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 457 PPSLKIWEPALNQTASPNLTPLRASSSGKTQPSAPSMA 344 PP+ P T+SP+ T ++SS+ T SAPS A Sbjct: 57 PPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTA 94
>FA53C_PONPY (Q5R815) Protein FAM53C| Length = 392 Score = 30.4 bits (67), Expect = 3.6 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 1/71 (1%) Frame = -3 Query: 463 SRPPSLKIWEPALNQTASPNLTPLR-ASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSA 287 S P L W+P S TP++ S G P P + + + SS RFL S S+ Sbjct: 122 SVPVDLSRWQPVWRPAPSKLWTPIKHRGSGGGGGPQVPHQSPPKRV-SSLRFLQAPSASS 180 Query: 286 ESPAVSQP*SP 254 + +P SP Sbjct: 181 QCAPAHRPYSP 191
>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 454 Score = 30.4 bits (67), Expect = 3.6 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = -1 Query: 348 WPSGNGSPPAHGSWRRSPGQQR 283 WP+ +GSP A GSW SPG++R Sbjct: 312 WPAPSGSPDA-GSWLPSPGRRR 332
>BSH_MOUSE (Q810B3) Brain-specific homeobox protein homolog| Length = 232 Score = 30.4 bits (67), Expect = 3.6 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +2 Query: 431 RLPDLQRGWPRLPRQS*LGPRAEHPCHLG 517 R+P L G+P +P + L P A HP H G Sbjct: 48 RVPLLDYGYPLMPTPTLLTPHAHHPLHKG 76
>T240L_MOUSE (Q6JPI3) Thyroid hormone receptor-associated protein 2 (Thyroid| hormone receptor-associated protein complex 240 kDa component-like) Length = 2207 Score = 30.0 bits (66), Expect = 4.8 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Frame = -3 Query: 457 PPSLKIWEPALNQTASPNLTPLRASSS--GKTQPSAPSMAQRQWITSSSRFLAKVSGSAE 284 PP+ + P + +A+P + ASS G + SAP + Q TSSS F V G Sbjct: 1556 PPAGSAFNPTSSSSANPTTSSSSASSGPPGSSAASAPGITQMN-TTSSSGFGGGVGGQNP 1614 Query: 283 SP-AVSQP*SPGN 248 S S +PGN Sbjct: 1615 SAGGSSTDRTPGN 1627
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 30.0 bits (66), Expect = 4.8 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 1/78 (1%) Frame = -3 Query: 436 EPALNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*S 257 +P Q +P +S + + QP+ P A T++ R L + S E+ + S Sbjct: 232 KPLPQQPPAPANQDQNSSQNARLQPTPPIQAPAPKPTAAPRPLDRESPGVENKLIPPVGS 291 Query: 256 PGNS-PLR*LGGSPESGP 206 PG+S PL G P S P Sbjct: 292 PGSSTPLPPDGTGPNSTP 309
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.6 bits (65), Expect = 6.2 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +3 Query: 297 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEG-----GL 461 ET +K R+++ I C ++ +L +F E++ NG F + +G + F+ GL Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKEFARRFALTFGL 961 Query: 462 DYL 470 D L Sbjct: 962 DQL 964
>AREA_ASPNG (O13412) Nitrogen regulatory protein areA| Length = 882 Score = 29.6 bits (65), Expect = 6.2 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 1/90 (1%) Frame = -3 Query: 418 TASPNLTPL-RASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSP 242 T++PN L R S + T ++P+ ++S+ S+P SPG S Sbjct: 620 TSTPNTAQLLRQSMNANTSHTSPNTPPESGLSSA--------------VPSRPASPGGSK 665 Query: 241 LR*LGGSPESGPR*STRSGARTTGCWRWQP 152 G SGP T +TT WR P Sbjct: 666 ----NGEQSSGPTTCTNCFTQTTPLWRRNP 691
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 29.3 bits (64), Expect = 8.1 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +3 Query: 297 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 407 ET +K R+++ I C ++ +L +F E++ NG F Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938
>AREA_PENRO (O13508) Nitrogen regulatory protein areA (Nitrogen regulator nmc)| Length = 860 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -3 Query: 283 SPAVSQP*SPGNSPLR*LGGSPESGPR*STRSGARTTGCWRWQP 152 S S+P SPG S G P +GP T +TT WR P Sbjct: 636 SAVPSRPGSPGGSK----NGDPNAGPTTCTNCFTQTTPLWRRNP 675
>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)| (Lymphocyte antigen 64) Length = 573 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -3 Query: 385 SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNS 245 SSSG T P +Q +S + SG A P Q SPG+S Sbjct: 27 SSSGGTSPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSS 73
>HMEN_DROME (P02836) Segmentation polarity homeobox protein engrailed| Length = 552 Score = 29.3 bits (64), Expect = 8.1 Identities = 23/69 (33%), Positives = 33/69 (47%) Frame = -3 Query: 427 LNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGN 248 + Q A+P +T SSS + S P + I+S+S +A S S+ S S S + Sbjct: 306 IGQPAAPTMTQPPLSSSASSLASPPPASNASTISSTSS-VATSSSSSSSGCSSAASSLNS 364 Query: 247 SPLR*LGGS 221 SP LG S Sbjct: 365 SPSSRLGAS 373
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 29.3 bits (64), Expect = 8.1 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = -3 Query: 433 PALNQTASPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SP 254 P QT+SP P+R +S Q RQ + S+R + +VS + E + + SP Sbjct: 707 PRAPQTSSP--PPVRRGASASPQG-------RQSPSPSTRPIRRVSRTPEPKKIKKAASP 757 Query: 253 GNSPLR*LGGSPE 215 P+R + +PE Sbjct: 758 STRPIRRVSRTPE 770
>NHL1_CAEEL (Q03601) RING finger protein nhl-1| Length = 974 Score = 29.3 bits (64), Expect = 8.1 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -3 Query: 439 WEPALNQTASPNL--TPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQ 266 W N +A+P+L T + A SS +T P A R + SR + + + E+P Sbjct: 405 WNRLRNSSAAPSLLTTSVTADSSSRTSPWAADRVTRSVEPTKSRPTSLIVPNTETPRTVS 464 Query: 265 P 263 P Sbjct: 465 P 465
>GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF-6)| (Growth/differentiation factor 16) Length = 452 Score = 29.3 bits (64), Expect = 8.1 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -1 Query: 348 WPSGNGSPPAHGSWRRSPGQQR 283 WP+ +G+P A GSW SPG++R Sbjct: 310 WPAPSGAPDA-GSWLPSPGRRR 330
>NRFA_PENUR (Q92269) Nitrogen regulatory protein nrfA| Length = 865 Score = 29.3 bits (64), Expect = 8.1 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -3 Query: 283 SPAVSQP*SPGNSPLR*LGGSPESGPR*STRSGARTTGCWRWQP 152 S S+P SPG S G P +GP T +TT WR P Sbjct: 641 SAVPSRPGSPGGSK----NGDPNAGPTTCTNCFTQTTPLWRRNP 680 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,166,872 Number of Sequences: 219361 Number of extensions: 1364491 Number of successful extensions: 5844 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 5468 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5776 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
