ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3a14 |
|---|---|
| Clone Library Name | barley_pub |
>ADA12_HUMAN (O43184) ADAM 12 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 12) (Meltrin alpha) Length = 909 Score = 37.0 bits (84), Expect = 0.059 Identities = 20/48 (41%), Positives = 24/48 (50%) Frame = -2 Query: 619 PQTPSVPEARAPALALSHQSQG*CRPVCPSHWGPCSPSATT*RWLHSL 476 P+ PSVP PA Q+QG C+P P P P A T R H+L Sbjct: 826 PRAPSVPARPLPAKPALRQAQGTCKPNPPQKPLPADPLARTTRLTHAL 873
>AIPL1_MACMU (Q95MP0) Aryl-hydrocarbon-interacting protein-like 1| Length = 392 Score = 33.9 bits (76), Expect = 0.50 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = +1 Query: 91 EPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIETRPRSVPPAQP 255 E + +++E L R + + QP E +P + PP E+ T P + PPA+P Sbjct: 309 ENRMAEKQEEERLRCRNM-LSQGATQPPAEPPAQPPTAPPAELSTGPPADPPAEP 362 Score = 29.6 bits (65), Expect = 9.4 Identities = 18/69 (26%), Positives = 26/69 (37%) Frame = +1 Query: 46 MFKASSAVPEIQPVYEPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIET 225 M + P +P +PP T A S P + P + PP E+ T Sbjct: 326 MLSQGATQPPAEPPAQPP-------------TAPPAELSTGPPADPPAEPPTAPPAELST 372 Query: 226 RPRSVPPAQ 252 P + PPA+ Sbjct: 373 GPPAEPPAE 381
>TONB_NEIMB (P57004) Protein tonB| Length = 280 Score = 33.5 bits (75), Expect = 0.65 Identities = 22/64 (34%), Positives = 28/64 (43%) Frame = +1 Query: 64 AVPEIQPVYEPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIETRPRSVP 243 A PE QPV EPP L A A +Q +E E +P P E + +P P Sbjct: 63 AAPEPQPVPEPPKPVEPPKPVLKPVVTKKADADIQQPKE-EPKPEEKPKPEEKPKPEPKP 121 Query: 244 PAQP 255 A+P Sbjct: 122 EAKP 125
>TONB_NEIMA (P57003) Protein tonB| Length = 280 Score = 33.5 bits (75), Expect = 0.65 Identities = 22/64 (34%), Positives = 28/64 (43%) Frame = +1 Query: 64 AVPEIQPVYEPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIETRPRSVP 243 A PE QPV EPP L A A +Q +E E +P P E + +P P Sbjct: 63 AAPEPQPVPEPPKPVEPPKPVLKPVVTKKADADIQQPKE-EPKPEEKPKPEEKPKPEPKP 121 Query: 244 PAQP 255 A+P Sbjct: 122 EAKP 125
>HA22H_ARATH (Q8LEM6) HVA22-like protein h (AtHVA22h)| Length = 315 Score = 33.1 bits (74), Expect = 0.85 Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 21/135 (15%) Frame = +1 Query: 10 EEKPSSEGDLLQMFKASSAVPEI------------QPVYEPPLLRSRDDETLNKRTYDYA 153 EE+ + DL +A+S+ P++ +P+ PL R + L T + Sbjct: 162 EEEEQKQPDLKATSQAASSNPQVRLQSKKPQLVTKEPISPKPLSSPRKQQQLQTETKEAK 221 Query: 154 AASVQPKREMETRPRSVPP------REIETRPRSVPPAQPNQTDDSSWSLETLKQLVDFT 315 A+ Q K T P PP R+ PAQP+ T+ E Q V Sbjct: 222 ASVSQTKLTTLTPPGPPPPPPPPPPSPTTAAKRNADPAQPSPTE-----AEEASQTVAAL 276 Query: 316 PQ---EITQAISATE 351 P+ EI +A S+ E Sbjct: 277 PEPASEIQRASSSKE 291
>GOGA4_MOUSE (Q91VW5) Golgin subfamily A member 4 (tGolgin-1)| Length = 2238 Score = 32.7 bits (73), Expect = 1.1 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 14/82 (17%) Frame = +1 Query: 4 RHEEKPSSEGDLLQMF--KASSAVPEIQPVY------------EPPLLRSRDDETLNKRT 141 + E PS GD Q F K VP ++ ++ + PL+R+ E+LN+ Sbjct: 69 KDESSPSQSGDT-QTFAQKLQLRVPSMESLFRSPIKESLFRSSKEPLVRTSSRESLNQLD 127 Query: 142 YDYAAASVQPKREMETRPRSVP 207 D +AA+ P +ME+ P Sbjct: 128 LDCSAAAFDPPSDMESEAEDAP 149
>CSN12_GIBZE (Q4IMN9) COP9 signalosome complex subunit 12| Length = 502 Score = 32.3 bits (72), Expect = 1.5 Identities = 20/70 (28%), Positives = 32/70 (45%) Frame = -1 Query: 464 RSGLVQTSTLEMVPPTSSPQFERTTMKAMRMDAMQRLNSVAEIAWVISCGVKSTSCFRVS 285 R+G TL VPP PQ R+ A+ R + + I +KS++ + Sbjct: 15 RNGYKLAQTLSPVPPADDPQ---------RLMAVWRSTNSHSVKGDIKHFIKSSTAHKRK 65 Query: 284 RDHDESSVWL 255 DHDE++ W+ Sbjct: 66 LDHDETTGWV 75
>TIM54_NEUCR (Q9C0Q7) Mitochondrial import inner membrane translocase subunit| tim-54 Length = 425 Score = 32.3 bits (72), Expect = 1.5 Identities = 22/67 (32%), Positives = 31/67 (46%) Frame = +1 Query: 151 AAASVQPKREMETRPRSVPPREIETRPRSVPPAQPNQTDDSSWSLETLKQLVDFTPQEIT 330 A A+ + E +P E +P+ P +P T S +S ETL L TPQE+T Sbjct: 201 APAAAEGSTSTEDKPAEEKKEEEAPKPKRPPQPKPYNTT-SDYSSETLHPL---TPQELT 256 Query: 331 QAISATE 351 A+ E Sbjct: 257 PAVPIRE 263
>YMU1_YEAST (Q12231) Transposon Ty1 protein A| Length = 440 Score = 32.3 bits (72), Expect = 1.5 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 15/77 (19%) Frame = +1 Query: 145 DYAAASVQPKREMETRPRS--VP--PREIETRPRSVPPAQ-----------PNQTDDSSW 279 +Y AS + + T P S VP P +P SVPP Q NQ + S W Sbjct: 42 EYDKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGW 101 Query: 280 SLETLKQLVDFTPQEIT 330 S ++ +TP +++ Sbjct: 102 SFYGHPSMIPYTPYQMS 118
>AIPL1_PAPCY (Q95MN8) Aryl-hydrocarbon-interacting protein-like 1| Length = 372 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = +1 Query: 91 EPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIETRPRSVPPAQ 252 E + +++E L R + + QP E P + PP E+ T P + PPA+ Sbjct: 309 ENRMAEKQEEERLRCRNM-LSQGATQPPTEPPAEPHTAPPAELSTGPPAEPPAE 361
>SRO9_YEAST (P25567) RNA-binding protein SRO9 (Suppressor of RHO3 protein 9)| Length = 434 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = -3 Query: 507 QQRHDDGY-IRYDEEQERPRTNQYSGDGATNIQPPVRKNHHEG---NENG 370 QQ DG+ EE + T+Q +G QPP +NHH N NG Sbjct: 139 QQMKKDGFESAVGEEDSKDATSQENGQSTQQQQPPHHRNHHHSHHHNSNG 188
>ISW1_CAEEL (P41877) Chromatin remodelling complex ATPase chain isw-1 (EC| 3.6.1.-) Length = 1009 Score = 31.6 bits (70), Expect = 2.5 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 5/99 (5%) Frame = +1 Query: 70 PEIQPVYEPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIETR----PRS 237 P++ V++ R E L+K Y Y + RP+ VPP+E E R + Sbjct: 721 PKLPQVFDFQFYPRRLFELLDKEIYHYRKTIGY----VAERPKDVPPKEAEKRQAEEQKL 776 Query: 238 VPPAQPNQTDDSSWSLETLKQLV-DFTPQEITQAISATE 351 + A+P + E L Q V D+T +E Q + E Sbjct: 777 INNARPLTDKEQEEKAELLTQSVTDWTKREFQQFVRGNE 815
>G6PI_COREF (Q8FR39) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 542 Score = 31.6 bits (70), Expect = 2.5 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = -1 Query: 269 SSVWLGWAGGTDLGLVSISLGGTDLG 192 S WLG+ G T +V+I +GG+DLG Sbjct: 133 SGAWLGYTGRTIKKVVNIGIGGSDLG 158
>YJZ7_YEAST (P47098) Transposon Ty1 protein B| Length = 1755 Score = 31.2 bits (69), Expect = 3.2 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 15/80 (18%) Frame = +1 Query: 136 RTYDYAAASVQPKREMETRPRS--VP--PREIETRPRSVPPAQ-----------PNQTDD 270 +T + AS + + T P S VP P +P SVPP Q NQ + Sbjct: 39 KTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANP 98 Query: 271 SSWSLETLKQLVDFTPQEIT 330 S WS ++ +TP +++ Sbjct: 99 SGWSFYGHPSMIPYTPYQMS 118
>KKQ8_YEAST (P36004) Probable serine/threonine-protein kinase YKL168C (EC| 2.7.11.1) Length = 734 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 85 VYEPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIETRPRSVPPAQPNQT 264 ++ PP RSRD +N Y ++S PKR E RS +I P++ P Q + T Sbjct: 37 LFRPP--RSRDSSPINVTRIPYRSSSTSPKRSSEPPRRSTVSAQI-LDPKNSPIRQRSYT 93
>FMT_GEOKA (Q5L0S3) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 319 Score = 31.2 bits (69), Expect = 3.2 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Frame = +1 Query: 82 PVYEPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPR-EIETRPRSVPPAQPN 258 P + P+LR D+ Y AA QP + + VPP ++E R +P QP Sbjct: 10 PDFAVPILRQLLDDG-----YHVAAVVTQPDKPKGRKREPVPPPVKVEAERRGIPVLQPT 64 Query: 259 QTDDSSWSLETLKQLVDFTPQEITQA 336 + + E +Q++ F P I A Sbjct: 65 KIREP----EQYEQVLAFAPDLIVTA 86
>YJZ6_YEAST (P47097) Transposon Ty1 protein A| Length = 440 Score = 31.2 bits (69), Expect = 3.2 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 15/80 (18%) Frame = +1 Query: 136 RTYDYAAASVQPKREMETRPRS--VP--PREIETRPRSVPPAQ-----------PNQTDD 270 +T + AS + + T P S VP P +P SVPP Q NQ + Sbjct: 39 KTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANP 98 Query: 271 SSWSLETLKQLVDFTPQEIT 330 S WS ++ +TP +++ Sbjct: 99 SGWSFYGHPSMIPYTPYQMS 118
>FMT_BACHD (Q9K9Y6) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 317 Score = 31.2 bits (69), Expect = 3.2 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Frame = +1 Query: 82 PVYEPPLLRSRDDETLNKRTYDYAAASVQPKREM-ETRPRSVPPREIETRPRSVPPAQPN 258 P + P+LR L + Y AA QP R + R + PP ++E +P QP Sbjct: 9 PDFSVPVLRR-----LIEDGYTIAAVVTQPDRPVGRKRVLTPPPVKVEAEKHQIPVLQPE 63 Query: 259 QTDDSSWSLETLKQLVDFTPQEITQA 336 + D + L++L F P I A Sbjct: 64 KIRDEA----ELERLFSFEPDLIVTA 85
>G6PI_DEIRA (Q9RTL8) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 541 Score = 30.4 bits (67), Expect = 5.5 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 281 DHDESSVWLGWAGGTDLGLVSISLGGTDLGLV 186 D S WLG+ G +V+I +GG+DLG V Sbjct: 129 DAVRSGEWLGYTGKPIKNIVNIGIGGSDLGPV 160
>WA22_MYCTU (P0A686) WAG22 antigen precursor| Length = 914 Score = 30.4 bits (67), Expect = 5.5 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = +3 Query: 423 WHHLQSTGL-YEAAPVPHHNECNHRHVVADGEQGPQCEGQTGRHQPWL*WLRANAGARAS 599 WH+LQ L + P R ++ +G+ G G G WL N GA A+ Sbjct: 508 WHNLQQDILSFINEPT---EALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNGGNGGAGAA 564 Query: 600 GTEGV*GYADG 632 GT G G A G Sbjct: 565 GTNGSAGGAGG 575
>WA22_MYCBO (P0A687) WAG22 antigen precursor| Length = 914 Score = 30.4 bits (67), Expect = 5.5 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Frame = +3 Query: 423 WHHLQSTGL-YEAAPVPHHNECNHRHVVADGEQGPQCEGQTGRHQPWL*WLRANAGARAS 599 WH+LQ L + P R ++ +G+ G G G WL N GA A+ Sbjct: 508 WHNLQQDILSFINEPT---EALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNGGNGGAGAA 564 Query: 600 GTEGV*GYADG 632 GT G G A G Sbjct: 565 GTNGSAGGAGG 575
>YAIC_ECOLI (P0AAP1) Hypothetical protein yaiC| Length = 371 Score = 30.4 bits (67), Expect = 5.5 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 6/68 (8%) Frame = +2 Query: 245 QPSLTKQTTHHGLWKL*SNSWISRRRRLPK------LSQPQSSAAAWHPFSLPSWWFFRT 406 +P LT Q H S +RR RLP+ + P +S HP P WW+ Sbjct: 21 EPPLTPQNEHQR-----SGLRFARRVRLPRAVGLAGMFLPIASTLVSHP--PPGWWWLVL 73 Query: 407 GGWMLVAP 430 GW V P Sbjct: 74 VGWAFVWP 81
>YAIC_ECOL6 (P0AAP2) Hypothetical protein yaiC| Length = 371 Score = 30.4 bits (67), Expect = 5.5 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 6/68 (8%) Frame = +2 Query: 245 QPSLTKQTTHHGLWKL*SNSWISRRRRLPK------LSQPQSSAAAWHPFSLPSWWFFRT 406 +P LT Q H S +RR RLP+ + P +S HP P WW+ Sbjct: 21 EPPLTPQNEHQR-----SGLRFARRVRLPRAVGLAGMFLPIASTLVSHP--PPGWWWLVL 73 Query: 407 GGWMLVAP 430 GW V P Sbjct: 74 VGWAFVWP 81
>AXN1_BRARE (P57094) Axin-1 (Axis inhibition protein 1)| Length = 835 Score = 30.4 bits (67), Expect = 5.5 Identities = 24/90 (26%), Positives = 34/90 (37%) Frame = +3 Query: 366 GIHSHCLHGGSFELGAGCWWHHLQSTGLYEAAPVPHHNECNHRHVVADGEQGPQCEGQTG 545 G+ + + G L G H + EAA + HH +H H A G+ Q E + Sbjct: 506 GLPAGKIPGLMMPLSGGQGKHQARQGPKGEAAHLHHHKHIHHTHYAAAGKPKEQAEAEAA 565 Query: 546 RHQPWL*WLRANAGARASGTEGV*GYADGL 635 R W N G + YADG+ Sbjct: 566 RMHGGFAW---NTEQHHYGPKSR-NYADGM 591
>LYRIC_MOUSE (Q80WJ7) Protein LYRIC (Lysine-rich CEACAM1 co-isolated protein)| (3D3/LYRIC) (Metastasis adhesion protein) (Metadherin) Length = 579 Score = 30.0 bits (66), Expect = 7.2 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Frame = +1 Query: 10 EEKPSSEGDLLQMFKASSAVPEIQPVYE-PPLLRSRDDETLNKRTYDYAAASVQPKREME 186 +EK S + A + QPV PP + + TL+K D +++ V P + Sbjct: 481 QEKACSLKTMSTSDPAEVLIKNSQPVKTLPPAISAEPSITLSKGDSDNSSSQVPPMLQDT 540 Query: 187 TRPRSVPPREIETRPRSVPPAQPNQTDDSSWSLETLKQL 303 +P+S + SVPP+Q +++W E+ KQ+ Sbjct: 541 DKPKS------NAKQNSVPPSQTK--SETNW--ESPKQI 569
>G6PI_KLULA (P12341) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 555 Score = 30.0 bits (66), Expect = 7.2 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -1 Query: 269 SSVWLGWAGGTDLGLVSISLGGTDLGLVSIS 177 S W G+ G + +V+I +GG+DLG V ++ Sbjct: 148 SGAWKGYTGKSITDVVNIGIGGSDLGPVMVT 178
>G6PI_AGABI (Q711G1) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 551 Score = 30.0 bits (66), Expect = 7.2 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -1 Query: 269 SSVWLGWAGGTDLGLVSISLGGTDLGLVSIS 177 S W G+ G T +V+I +GG+DLG V ++ Sbjct: 140 SGQWKGYTGKTINTIVNIGIGGSDLGPVMVT 170
>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1054 Score = 30.0 bits (66), Expect = 7.2 Identities = 23/87 (26%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Frame = +1 Query: 70 PEIQPVYEPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIETR--PRSVP 243 PE EPP + + T K +P E P + E TR P Sbjct: 398 PEPTTPKEPPPTTKKPEPTTPKEPGPTTPKEPEPTTTKEPEPTTTKEPESTTRKEPEPTT 457 Query: 244 PAQPNQTDDSSWSLETLKQLVDFTPQE 324 P +P T TLK+ TP+E Sbjct: 458 PKEPEPTTPKEPEPTTLKEPEPTTPKE 484
>NHK1_DROME (Q7KRY6) Nucleosomal histone kinase 1 (EC 2.7.11.1) (Protein| baellchen) Length = 599 Score = 30.0 bits (66), Expect = 7.2 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Frame = +1 Query: 151 AAASVQPKREMETRPRSVPPREIET-----RPRSVPPAQPNQTDDSSWSLETLKQLVDFT 315 A +S ++ ++T P+S P RE T +PRS P A P ++ L T ++F+ Sbjct: 425 ADSSPPSQKRVKTEPKSTP-RERATPKASPKPRSTPKASPKPQTPTAARLRTPNAKINFS 483 Query: 316 P 318 P Sbjct: 484 P 484
>UBS1_YEAST (P38290) Ubiquitin-conjugating enzyme suppressor 1| Length = 277 Score = 30.0 bits (66), Expect = 7.2 Identities = 18/61 (29%), Positives = 32/61 (52%) Frame = +1 Query: 100 LLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIETRPRSVPPAQPNQTDDSSW 279 +L + ++ +NKRT+DY A K + S+ P R R++ A P++T+D+ Sbjct: 210 MLSTLNNNNVNKRTHDYNAIDFMTKNLLACDDDSIHPVVSSKRSRTL--ACPDETNDNRG 267 Query: 280 S 282 S Sbjct: 268 S 268
>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)| Length = 1285 Score = 30.0 bits (66), Expect = 7.2 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +1 Query: 160 SVQPKREMETRPRSVPPREI-ETRPRSVPPAQPNQ 261 S +P ++ P S+PPR TRP S PP++P++ Sbjct: 529 SSRPPSRYQSGPNSLPPRAATHTRPPSRPPSRPSR 563
>G6PI_ASHGO (Q758L0) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 555 Score = 29.6 bits (65), Expect = 9.4 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -1 Query: 269 SSVWLGWAGGTDLGLVSISLGGTDLGLVSIS 177 S W G+ G + +V+I +GG+DLG V ++ Sbjct: 148 SGAWKGYTGKSIKDVVNIGIGGSDLGPVMVT 178
>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1424 Score = 29.6 bits (65), Expect = 9.4 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +1 Query: 166 QPKREMETRPRSVPPREIETRPRSVPPAQPNQ 261 Q +REM+ + +++ E+ R RSVPP+ P + Sbjct: 637 QARREMQAQQQALLEMEVAPRGRSVPPSPPER 668
>LAMA5_MOUSE (Q61001) Laminin alpha-5 chain precursor| Length = 3718 Score = 29.6 bits (65), Expect = 9.4 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = -2 Query: 619 PQTPSVPEARAPALALSHQSQG*CRPVCPSHWG 521 P P++PE +AP + +H C P +WG Sbjct: 738 PANPALPETQAPCMCRAHVEGPSCDRCKPGYWG 770
>G6PI_SCHPO (P78917) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 550 Score = 29.6 bits (65), Expect = 9.4 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -1 Query: 281 DHDESSVWLGWAGGTDLGLVSISLGGTDLGLVSIS 177 D S W G+ G +V++ +GG+DLG V ++ Sbjct: 139 DAVRSGAWKGYTGKPIKSIVNVGIGGSDLGPVMVT 173
>SPT5_YEAST (P27692) Transcription elongation factor SPT5 (Chromatin elongation| factor SPT5) Length = 1063 Score = 29.6 bits (65), Expect = 9.4 Identities = 15/65 (23%), Positives = 27/65 (41%) Frame = +1 Query: 82 PVYEPPLLRSRDDETLNKRTYDYAAASVQPKREMETRPRSVPPREIETRPRSVPPAQPNQ 261 PV P ++D+ T +K T D + E ++PP + E + P QP Sbjct: 21 PVVVPQSTDTKDENTSDKDTVDSGNVTTTESTERAESTSNIPPLDGEEKEAKSEPQQPED 80 Query: 262 TDDSS 276 +++ Sbjct: 81 NAETA 85
>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor| Length = 3695 Score = 29.6 bits (65), Expect = 9.4 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = -2 Query: 619 PQTPSVPEARAPALALSHQSQG*CRPVCPSHWG--PCSPSATT 497 P P++PEA+ P + +H C P WG P +P T Sbjct: 732 PVDPALPEAQVPCMCRAHVEGPSCDRCKPGFWGLSPSNPEGCT 774
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 29.6 bits (65), Expect = 9.4 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +1 Query: 160 SVQPKREMETRPRSVPPREIE-TRPRSVPPAQPNQ 261 S +P ++ P S+PPR TRP S PP++P++ Sbjct: 559 SSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSR 593
>DBP8_SCHPO (Q9HGM5) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 453 Score = 29.6 bits (65), Expect = 9.4 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Frame = +1 Query: 271 SSWSLETLKQLVDFTPQEITQAISA--TEFSRCMASI------LIAF-MVVLSNWGLDVG 423 S W ++TLK L + P +I + + A E C+ AF + ++ W D Sbjct: 15 SPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPIIEKWSKDPS 74 Query: 424 GTISRVLVCTRPLLFLI 474 G + +L TR L I Sbjct: 75 GIFALILTPTRELAIQI 91 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 109,950,371 Number of Sequences: 219361 Number of extensions: 2524982 Number of successful extensions: 8362 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 7648 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8313 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
