Clone Name | basd3a10 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein Length = 1318 Score = 1003 bits (506), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 562 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 563 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatttacaaccgagaaaccgac 622 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgta 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgta 682 Query: 189 gagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcct 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 gagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcct 742 Query: 249 agaggcgcccgggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 agaggcgcccgggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtg 802 Query: 309 ggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgagcatggc 368 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 803 ggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagcgagcatggc 862 Query: 369 aaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggcttcggt 428 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 863 aaagtggtcgatgccaaggtcgtctacgacagagacactgggcgctcacgaggcttcggt 922 Query: 429 ttcgtgacaatggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 923 ttcgtgacaatggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacag 982 Query: 489 agcttggaggggcgtgccctaagggtcaacgtcgcgga 526 |||||||||||||||||||||||||||||||||||||| Sbjct: 983 agcttggaggggcgtgccctaagggtcaacgtcgcgga 1020
>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds Length = 1161 Score = 773 bits (390), Expect = 0.0 Identities = 486/518 (93%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 378 gaggccaaggtgtacgtcggcaacctgccctacgacgtggacagcgagcgcctcgcgcag 437 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 ||||||||||||||||||||||||||||||||||||||||| || ||| | ||||| ||| Sbjct: 438 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatttataacagggaaacagac 497 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgta 188 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 498 cagagccgtggatttgggtttgtcaccatgagtaccattgaggaggctgagaaggccgtg 557 Query: 189 gagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcct 248 ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct: 558 gagatgttccatcgctatgacgtgaacgggaggctgttgactgtaaacaaggcagctcct 617 Query: 249 agaggcgcccgggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 618 agaggcgcccgggtggaaaggcctccccgtgattccgggtcttcattcaggatctacgtg 677 Query: 309 ggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgagcatggc 368 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| Sbjct: 678 ggcaacctgccatggcaagtggacgactctaggttggtagagctgttcagcgagcacggc 737 Query: 369 aaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggcttcggt 428 ||||| |||||||||||||| ||||||||||||||||||||||||||||| || || ||| Sbjct: 738 aaagttgtcgatgccagggttgtctacgacagagacactgggcgctcacggggatttggt 797 Query: 429 ttcgtgacaatggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacag 488 |||||||||||||| || ||| |||||| ||||| |||||||||||||||||||||||| Sbjct: 798 ttcgtgacaatggcatcacagccggaacttgatgatgccatcgctgccctcgatggacag 857 Query: 489 agcttggaggggcgtgccctaagggtcaacgtcgcgga 526 ||||||||||||||||| || |||| ||||| ||||| Sbjct: 858 agcttggaggggcgtgctctgcgggtgaacgttgcgga 895
>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full insert sequence Length = 1196 Score = 509 bits (257), Expect = e-141 Identities = 437/497 (87%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||| Sbjct: 450 gaggccaaggtctacgtcgggaacctaccctacgacatcgacagcgagcgcctcgcccag 509 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 510 ctcttcgaacaggccggcatcgtcgaggtctccgaggtcatctacaacagagaaacagat 569 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgta 188 | ||| |||||||| || |||||||||||||| ||| |||||||||||||||||||||| Sbjct: 570 cggagtcgtggatttggatttgtcaccatgagcaccgttgaggaggctgagaaggctgtg 629 Query: 189 gagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcct 248 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 630 gagatgttccatcgctacgatgttgatgggaggcttctgactgtaaacaaggcagctcct 689 Query: 249 agaggcgcccgggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtg 308 |||||||| ||||||||||| ||||||||| | | ||| |||| |||||||| |||||| Sbjct: 690 agaggcgctcgggtggaaagacctccccgtcagtttgggccttctttcaggatttatgtg 749 Query: 309 ggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgagcatggc 368 ||||| || || ||||||||||| |||||||||||||| |||||||||| ||||||||| Sbjct: 750 ggcaatctcccttggcaagtggatgactctaggttggtacagctgttcagcgagcatggc 809 Query: 369 aaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggcttcggt 428 ||||| ||||| ||||| || || || |||||||| |||||||| |||||||| || ||| Sbjct: 810 aaagtagtcgacgccagagttgtgtatgacagagaaactgggcgttcacgaggatttggt 869 Query: 429 ttcgtgacaatggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacag 488 || || ||||||||| | ||||| ||| |||| ||||| || || ||||||||||||||| Sbjct: 870 tttgtaacaatggcgacacaggaagaattggacgacgctattgcagccctcgatggacag 929 Query: 489 agcttggaggggcgtgc 505 || ||||| || ||||| Sbjct: 930 agtttggatggccgtgc 946
>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full insert sequence Length = 1289 Score = 509 bits (257), Expect = e-141 Identities = 437/497 (87%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||| Sbjct: 451 gaggccaaggtctacgtcgggaacctaccctacgacatcgacagcgagcgcctcgcccag 510 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 511 ctcttcgaacaggccggcatcgtcgaggtctccgaggtcatctacaacagagaaacagat 570 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgta 188 | ||| |||||||| || |||||||||||||| ||| |||||||||||||||||||||| Sbjct: 571 cggagtcgtggatttggatttgtcaccatgagcaccgttgaggaggctgagaaggctgtg 630 Query: 189 gagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcct 248 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 631 gagatgttccatcgctacgatgttgatgggaggcttctgactgtaaacaaggcagctcct 690 Query: 249 agaggcgcccgggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtg 308 |||||||| ||||||||||| ||||||||| | | ||| |||| |||||||| |||||| Sbjct: 691 agaggcgctcgggtggaaagacctccccgtcagtttgggccttctttcaggatttatgtg 750 Query: 309 ggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgagcatggc 368 ||||| || || ||||||||||| |||||||||||||| |||||||||| ||||||||| Sbjct: 751 ggcaatctcccttggcaagtggatgactctaggttggtacagctgttcagcgagcatggc 810 Query: 369 aaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggcttcggt 428 ||||| ||||| ||||| || || || |||||||| |||||||| |||||||| || ||| Sbjct: 811 aaagtagtcgacgccagagttgtgtatgacagagaaactgggcgttcacgaggatttggt 870 Query: 429 ttcgtgacaatggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacag 488 || || ||||||||| | ||||| ||| |||| ||||| || || ||||||||||||||| Sbjct: 871 tttgtaacaatggcgacacaggaagaattggacgacgctattgcagccctcgatggacag 930 Query: 489 agcttggaggggcgtgc 505 || ||||| || ||||| Sbjct: 931 agtttggatggccgtgc 947
>emb|AJ234452.1|HVU234452 Hordeum vulgare partial mRNA; clone cMWG0781 Length = 350 Score = 500 bits (252), Expect = e-138 Identities = 265/268 (98%), Gaps = 1/268 (0%) Strand = Plus / Minus Query: 259 gggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtgggcaacctgc 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 gggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtgggcaacctgc 289 Query: 319 catggcaagtggacgactctaggttggtggagctgttcagtgagcatggcaaagtggtcg 378 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 288 catggcaagtggacgactctaggttggtggagctgttcagcgagcatggcaaagtggtcg 229 Query: 379 atgccagggtcgtctacgacagagacactgggcgctcacgaggcttcggtttcgtgacaa 438 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 228 atgccagggtcgtctacgacagagacactgggcgcccacgaggcttcggtttcgtgacaa 169 Query: 439 tggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacagagcttggagg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 168 tggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacagagcttgga-g 110 Query: 499 ggcgtgccctaagggtcaacgtcgcgga 526 |||||||||||||||||||||||||||| Sbjct: 109 ggcgtgccctaagggtcaacgtcgcgga 82
>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) Length = 1251 Score = 408 bits (206), Expect = e-111 Identities = 425/498 (85%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 493 gaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcag 552 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||| ||||||||||||||||||||| | |||||||| |||||| ||||||| || Sbjct: 553 ctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaacagagaaacagat 612 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgta 188 || || ||||| || ||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 613 caaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggctgagaaggctgtg 672 Query: 189 gagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcct 248 ||||||||||||||||| ||||| ||||| ||||| |||||||||| || ||||||||| Sbjct: 673 gagatgttccatcgctatgatgtcaatggaaggcttctgactgtaaataaagcagctcct 732 Query: 249 agaggcgcccgggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtg 308 |||||| | || ||||| || |||||| | | || ||| |||| |||| || ||||| Sbjct: 733 agaggctctcgtgtggacagacctcccagacaatctgggccttctctcagaatttatgtt 792 Query: 309 ggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgagcatggc 368 ||||||||||| ||||||||||| || ||||| ||||||||| ||||||| |||||||| Sbjct: 793 ggcaacctgccttggcaagtggatgattctagattggtggagttgttcagcgagcatggt 852 Query: 369 aaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggcttcggt 428 ||||| || |||||||| || ||||| ||| |||| |||||||| ||||| || || ||| Sbjct: 853 aaagtagttgatgccagagttgtctatgaccgagaaactgggcgttcacggggatttggt 912 Query: 429 ttcgtgacaatggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacag 488 || || || ||||| |||||||| ||| ||||||| || || |||||||| ||||||||| Sbjct: 913 tttgttactatggcatcgcaggacgaattggatgatgctattgctgcccttgatggacag 972 Query: 489 agcttggaggggcgtgcc 506 || ||||| || |||||| Sbjct: 973 agtttggatggccgtgcc 990
>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence Length = 1273 Score = 400 bits (202), Expect = e-108 Identities = 424/498 (85%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 493 gaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcag 552 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||| ||||||||||||||||||||| | |||||||| |||||| ||||||| || Sbjct: 553 ctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaacagagaaacagat 612 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgta 188 || || ||||| || ||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 613 caaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggctgagaaggctgtg 672 Query: 189 gagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcct 248 ||||||||||||||||| ||||| ||||| ||||| |||||||||| || ||||||||| Sbjct: 673 gagatgttccatcgctatgatgtcaatggaaggcttctgactgtaaataaagcagctcct 732 Query: 249 agaggcgcccgggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtg 308 |||||| | || ||||| || |||||| | | || ||| |||| |||| || ||||| Sbjct: 733 agaggctctcgtgtggacagacctcccagacaatctgggccttctctcagaatttatgtt 792 Query: 309 ggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgagcatggc 368 ||||||||||| ||||||||||| || ||||| ||||||||| ||||||| |||||||| Sbjct: 793 ggcaacctgccttggcaagtggatgattctagattggtggagttgttcagcgagcatggt 852 Query: 369 aaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggcttcggt 428 ||||| || |||||||| || ||||| ||| |||| |||||||| || || || || ||| Sbjct: 853 aaagtagttgatgccagagttgtctatgaccgagaaactgggcgttcgcggggatttggt 912 Query: 429 ttcgtgacaatggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacag 488 || || || ||||| |||||||| ||| ||||||| || || |||||||| ||||||||| Sbjct: 913 tttgttactatggcatcgcaggacgaattggatgatgctattgctgcccttgatggacag 972 Query: 489 agcttggaggggcgtgcc 506 || ||||| || |||||| Sbjct: 973 agtttggatggccgtgcc 990
>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence Length = 1108 Score = 385 bits (194), Expect = e-103 Identities = 410/482 (85%) Strand = Plus / Minus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 725 gaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcag 666 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||| ||||||||||||||||||||| | |||||||| |||||| ||||||| || Sbjct: 665 ctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaacagagaaacagat 606 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgta 188 || || ||||| || ||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 605 caaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggctgagaaggctgtg 546 Query: 189 gagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcct 248 ||||||||||||||||| ||||| ||||| ||||| |||||||||| || ||||||||| Sbjct: 545 gagatgttccatcgctatgatgtcaatggaaggcttctgactgtaaataaagcagctcct 486 Query: 249 agaggcgcccgggtggaaaggcctccccgtgattccgggtcttcattcaggatctatgtg 308 |||||| | || ||||| || |||||| | | || ||| |||| |||| || ||||| Sbjct: 485 agaggctctcgtgtggacagacctcccagacaatctgggccttctctcagaatttatgtt 426 Query: 309 ggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgagcatggc 368 ||||||||||| ||||||||||| || ||||| ||||||| | ||||||| |||||||| Sbjct: 425 ggcaacctgccttggcaagtggatgattctagattggtggggttgttcagcgagcatggt 366 Query: 369 aaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggcttcggt 428 ||||| || |||||||| || ||||| ||| |||| |||||| | ||||| || || ||| Sbjct: 365 aaagtagttgatgccagagttgtctatgacggagaaactgggggttcacggggatttggt 306 Query: 429 ttcgtgacaatggcgtcgcaggaggaactggatgacgccatcgctgccctcgatggacag 488 || || || ||||| |||||||| ||| ||||||| || || |||||||| ||||||||| Sbjct: 305 tttgttactatggcatcgcaggacgaattggatgatgctattgctgcccttgatggacag 246 Query: 489 ag 490 || Sbjct: 245 ag 244
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 244 bits (123), Expect = 2e-61 Identities = 237/275 (86%) Strand = Plus / Minus Query: 214 atgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctc 273 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 22204479 atgggaggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctc 22204420 Query: 274 cccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacg 333 ||||| | | ||| |||| |||||||| ||||||||||| || || ||||||||||| | Sbjct: 22204419 cccgtcagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatg 22204360 Query: 334 actctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtct 393 ||||||||||||| |||||||||| |||||||||||||| ||||| ||||| || || | Sbjct: 22204359 actctaggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgt 22204300 Query: 394 acgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggagg 453 | |||||||| |||||||| |||||||| || ||||| || ||||||||| | ||||| | Sbjct: 22204299 atgacagagaaactgggcgttcacgaggatttggttttgtaacaatggcgacacaggaag 22204240 Query: 454 aactggatgacgccatcgctgccctcgatggacag 488 || |||| ||||| || || ||||||||||||||| Sbjct: 22204239 aattggacgacgctattgcagccctcgatggacag 22204205 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Minus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||| Sbjct: 22205682 gaggccaaggtctacgtcgggaacctaccctacgacatcgacagcgagcgcctcgcccag 22205623 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggt 106 |||||||| ||||||||| ||||||||||||||||||| Sbjct: 22205622 ctcttcgaacaggccggcatcgtcgaggtctccgaggt 22205585 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 103 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 162 |||||||||||||| ||||||| || | ||| |||||||| || |||||||||||||| | Sbjct: 22205108 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 22205049 Query: 163 ccattgaggaggctgagaaggctgtagagatgttccatcgctacg 207 || |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 22205048 ccgttgaggaggctgagaaggctgtggagatgttccatcgctacg 22205004 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||| |||||| || ||||||||||||||||||| || Sbjct: 570753 gaggccaaggtatacgtcgggaacctaccctacaacatcgacagcgagcgcctcgcccaa 570694 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggt 106 |||||||| |||| ||||||||||||||||||||||| Sbjct: 570693 ctcttcgaacaggaaggcgtcgtcgaggtctccgaggt 570656
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 244 bits (123), Expect = 2e-61 Identities = 237/275 (86%) Strand = Plus / Minus Query: 214 atgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctc 273 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 24377 atgggaggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctc 24318 Query: 274 cccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacg 333 ||||| | | ||| |||| |||||||| ||||||||||| || || ||||||||||| | Sbjct: 24317 cccgtcagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatg 24258 Query: 334 actctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtct 393 ||||||||||||| |||||||||| |||||||||||||| ||||| ||||| || || | Sbjct: 24257 actctaggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgt 24198 Query: 394 acgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggagg 453 | |||||||| |||||||| |||||||| || ||||| || ||||||||| | ||||| | Sbjct: 24197 atgacagagaaactgggcgttcacgaggatttggttttgtaacaatggcgacacaggaag 24138 Query: 454 aactggatgacgccatcgctgccctcgatggacag 488 || |||| ||||| || || ||||||||||||||| Sbjct: 24137 aattggacgacgctattgcagccctcgatggacag 24103 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Minus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||| Sbjct: 25580 gaggccaaggtctacgtcgggaacctaccctacgacatcgacagcgagcgcctcgcccag 25521 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggt 106 |||||||| ||||||||| ||||||||||||||||||| Sbjct: 25520 ctcttcgaacaggccggcatcgtcgaggtctccgaggt 25483 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 103 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 162 |||||||||||||| ||||||| || | ||| |||||||| || |||||||||||||| | Sbjct: 25006 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 24947 Query: 163 ccattgaggaggctgagaaggctgtagagatgttccatcgctacg 207 || |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 24946 ccgttgaggaggctgagaaggctgtggagatgttccatcgctacg 24902
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 244 bits (123), Expect = 2e-61 Identities = 237/275 (86%) Strand = Plus / Minus Query: 214 atgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaaaggcctc 273 |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 125972 atgggaggcttctgactgtaaacaaggcagctcctagaggcgctcgggtggaaagacctc 125913 Query: 274 cccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaagtggacg 333 ||||| | | ||| |||| |||||||| ||||||||||| || || ||||||||||| | Sbjct: 125912 cccgtcagtttgggccttctttcaggatttatgtgggcaatctcccttggcaagtggatg 125853 Query: 334 actctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagggtcgtct 393 ||||||||||||| |||||||||| |||||||||||||| ||||| ||||| || || | Sbjct: 125852 actctaggttggtacagctgttcagcgagcatggcaaagtagtcgacgccagagttgtgt 125793 Query: 394 acgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcgcaggagg 453 | |||||||| |||||||| |||||||| || ||||| || ||||||||| | ||||| | Sbjct: 125792 atgacagagaaactgggcgttcacgaggatttggttttgtaacaatggcgacacaggaag 125733 Query: 454 aactggatgacgccatcgctgccctcgatggacag 488 || |||| ||||| || || ||||||||||||||| Sbjct: 125732 aattggacgacgctattgcagccctcgatggacag 125698 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Minus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||| ||||||||| ||||||||||||||||||| ||| Sbjct: 127175 gaggccaaggtctacgtcgggaacctaccctacgacatcgacagcgagcgcctcgcccag 127116 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggt 106 |||||||| ||||||||| ||||||||||||||||||| Sbjct: 127115 ctcttcgaacaggccggcatcgtcgaggtctccgaggt 127078 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Minus Query: 103 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 162 |||||||||||||| ||||||| || | ||| |||||||| || |||||||||||||| | Sbjct: 126601 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 126542 Query: 163 ccattgaggaggctgagaaggctgtagagatgttccatcgctacg 207 || |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 126541 ccgttgaggaggctgagaaggctgtggagatgttccatcgctacg 126497
>ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1233 Score = 206 bits (104), Expect = 5e-50 Identities = 149/164 (90%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||| Sbjct: 446 gaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccag 505 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||||||||||||||||||||||||| |||||||||| |||||| |||| || | Sbjct: 506 ctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacaggg 565 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgagga 172 |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 566 cagagccgtggatttgggttcgttaccatgagtacgattgagga 609 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 740 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 799 Query: 363 catgg 367 ||||| Sbjct: 800 catgg 804
>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2 mRNA Length = 1302 Score = 206 bits (104), Expect = 5e-50 Identities = 149/164 (90%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||| Sbjct: 440 gaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccag 499 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||||||||||||||||||||||||| |||||||||| |||||| |||| || | Sbjct: 500 ctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacaggg 559 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgagga 172 |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 560 cagagccgtggatttgggttcgttaccatgagtacgattgagga 603 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 734 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 793 Query: 363 catgg 367 ||||| Sbjct: 794 catgg 798
>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full insert sequence Length = 1230 Score = 206 bits (104), Expect = 5e-50 Identities = 149/164 (90%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||| Sbjct: 443 gaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccag 502 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||||||||||||||||||||||||| |||||||||| |||||| |||| || | Sbjct: 503 ctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacaggg 562 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgagga 172 |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 563 cagagccgtggatttgggttcgttaccatgagtacgattgagga 606 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 737 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 796 Query: 363 catgg 367 ||||| Sbjct: 797 catgg 801
>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full insert sequence Length = 1302 Score = 206 bits (104), Expect = 5e-50 Identities = 149/164 (90%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||| Sbjct: 440 gaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccag 499 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||||||||||||||||||||||||| |||||||||| |||||| |||| || | Sbjct: 500 ctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacaggg 559 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgagga 172 |||||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 560 cagagccgtggatttgggttcgttaccatgagtacgattgagga 603 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 734 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 793 Query: 363 catgg 367 ||||| Sbjct: 794 catgg 798
>ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 200 bits (101), Expect = 3e-48 Identities = 146/161 (90%) Strand = Plus / Plus Query: 12 gccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctc 71 ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 68 gccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccagctc 127 Query: 72 ttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgaccag 131 ||||||||||||||||||||||||||| |||||||||| |||||| |||| || | ||| Sbjct: 128 ttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggcag 187 Query: 132 agccgtggattcgggtttgtcaccatgagtaccattgagga 172 ||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 188 agccgtggatttgggttcgttaccatgagtacgattgagga 228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 359 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 418 Query: 363 catgg 367 ||||| Sbjct: 419 catgg 423
>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full insert sequence Length = 927 Score = 200 bits (101), Expect = 3e-48 Identities = 146/161 (90%) Strand = Plus / Plus Query: 12 gccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctc 71 ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 68 gccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccagctc 127 Query: 72 ttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgaccag 131 ||||||||||||||||||||||||||| |||||||||| |||||| |||| || | ||| Sbjct: 128 ttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggcag 187 Query: 132 agccgtggattcgggtttgtcaccatgagtaccattgagga 172 ||||||||||| ||||| || ||||||||||| |||||||| Sbjct: 188 agccgtggatttgggttcgttaccatgagtacgattgagga 228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 359 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 418 Query: 363 catgg 367 ||||| Sbjct: 419 catgg 423
>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein Length = 1139 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 |||||||||||||||||||| |||||||| || || |||||||||||||| ||||| ||| Sbjct: 373 gaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgagcggctcgcccag 432 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 |||||||| |||||||| |||||||||||| |||||||||| |||||| ||| | | | Sbjct: 433 ctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacaaagagtcaggc 492 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctga 178 |||||||||||||| || ||||| ||||||||||| |||||||| ||||| Sbjct: 493 cagagccgtggatttggatttgttaccatgagtactattgaggaagctga 542 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| || |||||||||||||||| ||| ||||||||||||||| | ||||||| ||| Sbjct: 667 tatgttggtaacctgccatggcaagcggaagactctaggttggtgcaaatgttcagcgag 726 Query: 363 catggcaaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggc 422 ||||| |||| || |||| | | |||| || |||||||| |||||||| || ||||| Sbjct: 727 catggggaagtagttaatgctacgatcgtgtatgacagagaaactgggcgttcgcgagga 786 Query: 423 ttcggttt 430 || ||||| Sbjct: 787 tttggttt 794
>gb|AY108263.1| Zea mays PCO100700 mRNA sequence Length = 891 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| ||||| || ||||| ||||||||||||||||||||| | ||||||||| Sbjct: 69 gaggccaaggtctacgttgggaaccttccctacgacgtcgacagcgagggactcgcgcag 128 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatctacaaccgagaaaccgac 128 ||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||| | | Sbjct: 129 atcttcgaccaggccggcgtcgtcgaggtcgccgaggttatctacaacagagaaactggc 188 Query: 129 cagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctga 178 ||||||||||| || || ||||| |||||||| || ||||||| ||||| Sbjct: 189 cagagccgtgggtttggttttgttaccatgagcactgttgaggaagctga 238 Score = 125 bits (63), Expect = 2e-25 Identities = 132/155 (85%) Strand = Plus / Plus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| |||||| ||||||||||||| || ||||||||| ||||| || ||||||| ||| Sbjct: 363 tatgttggcaacttgccatggcaagttgatgactctaggctggtgcagttgttcagcgag 422 Query: 363 catggcaaagtggtcgatgccagggtcgtctacgacagagacactgggcgctcacgaggc 422 ||||| |||| || ||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct: 423 catggagaagttgttgatgctaaggttgtctacgacagagaaactgggcgctcacgagga 482 Query: 423 ttcggtttcgtgacaatggcgtcgcaggaggaact 457 |||||||| || |||||| ||| |||||||||| Sbjct: 483 ttcggttttgtatcaatggtgtcaaaggaggaact 517
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Minus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||| Sbjct: 27874497 gaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccag 27874438 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggt 106 |||||||||||||||||||||||||||||| ||||||| Sbjct: 27874437 ctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 27874400 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 27873734 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 27873675 Query: 363 catgg 367 ||||| Sbjct: 27873674 catgg 27873670 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 103 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 162 ||||||| |||||| |||| || | |||||||||||||| ||||| || |||||||||| Sbjct: 27874265 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 27874206 Query: 163 ccattgagga 172 | |||||||| Sbjct: 27874205 cgattgagga 27874196
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Minus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||| Sbjct: 82575 gaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccag 82516 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggt 106 |||||||||||||||||||||||||||||| ||||||| Sbjct: 82515 ctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 82478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 303 tatgtgggcaacctgccatggcaagtggacgactctaggttggtggagctgttcagtgag 362 ||||| ||||||||||||||||||||||| ||||||||| || || | ||||||| ||| Sbjct: 81812 tatgttggcaacctgccatggcaagtggatgactctaggctgctgcaattgttcagcgag 81753 Query: 363 catgg 367 ||||| Sbjct: 81752 catgg 81748 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 103 aggtcatctacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagta 162 ||||||| |||||| |||| || | |||||||||||||| ||||| || |||||||||| Sbjct: 82343 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 82284 Query: 163 ccattgagga 172 | |||||||| Sbjct: 82283 cgattgagga 82274
>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein Length = 3176 Score = 155 bits (78), Expect = 2e-34 Identities = 231/282 (81%) Strand = Plus / Plus Query: 207 gatgtgaatgggaggctgttgactgtaaacaaggcagctcctagaggcgcccgggtggaa 266 ||||| ||||| ||||| |||||||||| || ||||||||||||||| | || ||||| Sbjct: 2180 gatgtcaatggaaggcttctgactgtaaataaagcagctcctagaggctctcgtgtggac 2239 Query: 267 aggcctccccgtgattccgggtcttcattcaggatctatgtgggcaacctgccatggcaa 326 || |||||| | | || ||| |||| |||| || ||||| ||||||||||| |||||| Sbjct: 2240 agacctcccagacaatctgggccttctctcagaatttatgttggcaacctgccttggcaa 2299 Query: 327 gtggacgactctaggttggtggagctgttcagtgagcatggcaaagtggtcgatgccagg 386 ||||| || ||||| ||||||||| ||||||| |||||||| ||||| || |||||||| Sbjct: 2300 gtggatgattctagattggtggagttgttcagcgagcatggtaaagtagttgatgccaga 2359 Query: 387 gtcgtctacgacagagacactgggcgctcacgaggcttcggtttcgtgacaatggcgtcg 446 || ||||| ||| |||| |||||||| || || || || ||||| || || ||||| ||| Sbjct: 2360 gttgtctatgaccgagaaactgggcgttcgcggggatttggttttgttactatggcatcg 2419 Query: 447 caggaggaactggatgacgccatcgctgccctcgatggacag 488 ||||| ||| ||||||| || || |||||||| ||||||||| Sbjct: 2420 caggacgaattggatgatgctattgctgcccttgatggacag 2461 Score = 147 bits (74), Expect = 4e-32 Identities = 86/90 (95%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 706 gaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgagcgcctcgctcag 765 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtc 98 |||||||| ||||||||||||||||||||| Sbjct: 766 ctcttcgaccaggccggcgtcgtcgaggtc 795 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 111 tacaaccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgag 170 |||||| ||||||| || || || ||||| || ||||||||||| ||||| || ||||| Sbjct: 1202 tacaacagagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgttgag 1261 Query: 171 gaggctgagaaggctgtagagatgttccatcgc 203 ||||||||||||||||| ||||||||||||||| Sbjct: 1262 gaggctgagaaggctgtggagatgttccatcgc 1294
>dbj|AK070749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064A16, full insert sequence Length = 742 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||| |||||| || ||||||||||||||||||| || Sbjct: 419 gaggccaaggtatacgtcgggaacctaccctacaacatcgacagcgagcgcctcgcccaa 478 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggtca 108 |||||||| |||| ||||||||||||||||||||||||| Sbjct: 479 ctcttcgaacaggaaggcgtcgtcgaggtctccgaggtca 518
>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0094B20 Length = 146270 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 9 gaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcag 68 ||||||||||| |||||||| ||||| |||||| || ||||||||||||||||||| || Sbjct: 23763 gaggccaaggtatacgtcgggaacctaccctacaacatcgacagcgagcgcctcgcccaa 23704 Query: 69 ctcttcgagcaggccggcgtcgtcgaggtctccgaggt 106 |||||||| |||| ||||||||||||||||||||||| Sbjct: 23703 ctcttcgaacaggaaggcgtcgtcgaggtctccgaggt 23666
>ref|NM_124404.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT5G50250 mRNA, complete cds Length = 1071 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtagagatg 194 |||||||| |||||||| || |||||||| |||| || || ||||| ||||| |||| | Sbjct: 471 cgtggatttgggtttgtaacaatgagtacagttgaagaagcagagaaagctgttgagaag 530 Query: 195 ttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcctagagg 253 ||| || | | || ||||||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 531 ttcaatagttttgaagtgaatgggaggcgtttgacagtaaacagagcagctccaagagg 589
>ref|NM_118610.2| Arabidopsis thaliana RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding AT4G24770 (RBP31) mRNA, complete cds Length = 1254 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacagagcttggaggg 499 |||||| |||||||||||||||||| ||||||||| Sbjct: 972 gccatctctgccctcgatggacagaacttggaggg 1006 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 735 actgtaaacaaggcagctccaagagg 760 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 924 cgtggattcgggtttgtcac 943
>gb|BT012700.1| Lycopersicon esculentum clone 113574R, mRNA sequence Length = 1329 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtag 189 ||||||||||||||||| || ||||||||| | || || |||||||| ||||||| Sbjct: 560 cgtggattcgggtttgtgacaatgagtaccgtggaagaagctgagaaagctgtag 614
>emb|X65255.1|ATRNPT A.thaliana mRNA for RNA-binding protein (RNP-T) Length = 1148 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacagagcttggaggg 499 |||||| |||||||||||||||||| ||||||||| Sbjct: 952 gccatctctgccctcgatggacagaacttggaggg 986 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 715 actgtaaacaaggcagctccaagagg 740 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 904 cgtggattcgggtttgtcac 923
>gb|AY143865.1| Arabidopsis thaliana At4g24770/F22K18_30 mRNA, complete cds Length = 990 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacagagcttggaggg 499 |||||| |||||||||||||||||| ||||||||| Sbjct: 901 gccatctctgccctcgatggacagaacttggaggg 935 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 664 actgtaaacaaggcagctccaagagg 689 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 853 cgtggattcgggtttgtcac 872
>emb|X61108.1|ATRNPDG A.thaliana rnpD gene for RNA binding protein Length = 1090 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacagagcttggaggg 499 |||||| |||||||||||||||||| ||||||||| Sbjct: 844 gccatctctgccctcgatggacagaacttggaggg 878 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 607 actgtaaacaaggcagctccaagagg 632 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 796 cgtggattcgggtttgtcac 815
>gb|AY077660.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA, complete cds Length = 870 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtagagatg 194 |||||||| |||||||| || |||||||| |||| || || ||||| ||||| |||| | Sbjct: 460 cgtggatttgggtttgtaacaatgagtacagttgaagaagcagagaaagctgttgagaag 519 Query: 195 ttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcctagagg 253 ||| || | | || ||||||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 520 ttcaatagttttgaagtgaatgggaggcgtttgacagtaaacagagcagctccaagagg 578
>gb|AF410318.1|AF410318 Arabidopsis thaliana AT4g24770/F22K18_30 mRNA, complete cds Length = 1171 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacagagcttggaggg 499 |||||| |||||||||||||||||| ||||||||| Sbjct: 957 gccatctctgccctcgatggacagaacttggaggg 991 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 720 actgtaaacaaggcagctccaagagg 745 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 909 cgtggattcgggtttgtcac 928
>gb|AY039868.1| Arabidopsis thaliana AT5g50250/K6A12_11 mRNA, complete cds Length = 1067 Score = 54.0 bits (27), Expect = 5e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtagagatg 194 |||||||| |||||||| || |||||||| |||| || || ||||| ||||| |||| | Sbjct: 466 cgtggatttgggtttgtaacaatgagtacagttgaagaagcagagaaagctgttgagaag 525 Query: 195 ttccatcgctacgatgtgaatgggaggctgttgactgtaaacaaggcagctcctagagg 253 ||| || | | || ||||||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 526 ttcaatagttttgaagtgaatgggaggcgtttgacagtaaacagagcagctccaagagg 584
>dbj|D31713.1|ATHCP31D Arabidopsis thaliana mRNA for chloroplast RNA-binding protein cp31, partial cds Length = 1035 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacagagcttggaggg 499 |||||| |||||||||||||||||| ||||||||| Sbjct: 826 gccatctctgccctcgatggacagaacttggaggg 860 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 589 actgtaaacaaggcagctccaagagg 614 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 778 cgtggattcgggtttgtcac 797
>emb|X63157.1|AT5DBINDN A.thaliana mRNA (5'region) for DNA binding protein homologous to nucleolin Length = 872 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacagagcttggaggg 499 |||||| |||||||||||||||||| ||||||||| Sbjct: 661 gccatctctgccctcgatggacagaacttggaggg 695 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 424 actgtaaacaaggcagctccaagagg 449 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 613 cgtggattcgggtttgtcac 632
>gb|M94554.1|ATHRNABPA Arabidopsis thaliana 31-kDa RNA binding protein (rbp31) mRNA, complete cds Length = 1179 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacagagcttggaggg 499 |||||| |||||||||||||||||| ||||||||| Sbjct: 940 gccatctctgccctcgatggacagaacttggaggg 974 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 703 actgtaaacaaggcagctccaagagg 728 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 892 cgtggattcgggtttgtcac 911
>gb|AC120985.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1532_D06, complete sequence Length = 127150 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgccctacgacgtcgac 50 |||||||||||||||||||||||| ||||||| Sbjct: 70962 gtgtacgtcggcaacctgccctactccgtcgac 70994 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgcc 37 |||||||||||||||||||| Sbjct: 75398 gtgtacgtcggcaacctgcc 75417 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgcc 37 |||||||||||||||||||| Sbjct: 65375 gtgtacgtcggcaacctgcc 65394
>ref|XM_476203.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 309 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgccctacgacgtcgac 50 |||||||||||||||||||||||| ||||||| Sbjct: 58 gtgtacgtcggcaacctgccctactccgtcgac 90
>emb|X57955.1|SORBP28 S.oleracea mRNA for a 28kD RNA binding protein, involved in plastid mRNA 3' processing Length = 1009 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 460 atgacgccatcgctgccctcgatggacagagcttgga 496 |||||||||| ||||| ||||||||||||| |||||| Sbjct: 590 atgacgccattgctgctctcgatggacagaccttgga 626 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 144 gggtttgtcaccatgagtaccattgaggaggctgagaaggctgtagagatgtt 196 |||||||| ||||||||||| |||| || |||||||||||||| ||| |||| Sbjct: 274 gggtttgtgaccatgagtacagttgaagaagctgagaaggctgtggagttgtt 326
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgccctacgacgtcgac 50 |||||||||||||||||||||||| ||||||| Sbjct: 7457893 gtgtacgtcggcaacctgccctactccgtcgac 7457925 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgcc 37 |||||||||||||||||||| Sbjct: 7462329 gtgtacgtcggcaacctgcc 7462348 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgcc 37 |||||||||||||||||||| Sbjct: 7452306 gtgtacgtcggcaacctgcc 7452325
>dbj|AK069616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021C02, full insert sequence Length = 799 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgccctacgacgtcgac 50 |||||||||||||||||||||||| ||||||| Sbjct: 186 gtgtacgtcggcaacctgccctactccgtcgac 218
>emb|AJ421780.1|PAM421780 Persea americana chloroplast mRNA for RNA-binding protein precursor (rbp33 gene) Length = 1253 Score = 48.1 bits (24), Expect = 0.029 Identities = 117/148 (79%) Strand = Plus / Plus Query: 118 gagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgaggaggctg 177 ||||||| || ||||| || || || || ||||| || |||||||| |||| || || | Sbjct: 534 gagaaacagatcagagtcgcgggtttggttttgtgacgatgagtactgttgaagaagccg 593 Query: 178 agaaggctgtagagatgttccatcgctacgatgtgaatgggaggctgttgactgtaaaca 237 |||| || || ||||||||| | || || ||| | ||||| ||||| ||||||||||| | Sbjct: 594 agaaagcagtggagatgttcaaccgatatgatatcaatggaaggcttttgactgtaaata 653 Query: 238 aggcagctcctagaggcgcccgggtgga 265 | ||||| || ||||| ||||| ||||| Sbjct: 654 aagcagccccaagaggggcccgagtgga 681
>ref|NM_193093.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1053 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 44 cgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggc 86 ||||||||||| || |||||| ||||||||||||||||||| Sbjct: 334 cgtcgacagcgcgcagctcgcggggctcttcgagcaggccggc 376 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 351 ctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacag 400 |||||||||||||| || | ||| ||||||||| |||| |||||||||| Sbjct: 659 ctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacag 708
>gb|BT019164.1| Zea mays clone Contig829.F mRNA sequence Length = 1109 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 132 agccgtggattcgggtttgtcaccatg 158 |||||||||||||||||||| |||||| Sbjct: 706 agccgtggattcgggtttgtgaccatg 680
>gb|BT013136.1| Lycopersicon esculentum clone 114438F, mRNA sequence Length = 1317 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcaccatgagtaccattgaggaggctgagaaggctgtag 189 ||||||||||||||||| || ||||| ||| | || || |||||||| ||||||| Sbjct: 575 cgtggattcgggtttgtgacaatgagcaccgtggaagaagctgagaaagctgtag 629
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 44 cgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggc 86 ||||||||||| || |||||| ||||||||||||||||||| Sbjct: 26158502 cgtcgacagcgcgcagctcgcggggctcttcgagcaggccggc 26158544 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 351 ctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacag 400 |||||||||||||| || | ||| ||||||||| |||| |||||||||| Sbjct: 26159713 ctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacag 26159762
>dbj|AK061072.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D01, full insert sequence Length = 1052 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 44 cgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggc 86 ||||||||||| || |||||| ||||||||||||||||||| Sbjct: 334 cgtcgacagcgcgcagctcgcggggctcttcgagcaggccggc 376 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 351 ctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacag 400 |||||||||||||| || | ||| ||||||||| |||| |||||||||| Sbjct: 659 ctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacag 708
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 44 cgtcgacagcgagcgcctcgcgcagctcttcgagcaggccggc 86 ||||||||||| || |||||| ||||||||||||||||||| Sbjct: 50360 cgtcgacagcgcgcagctcgcggggctcttcgagcaggccggc 50402 Score = 44.1 bits (22), Expect = 0.46 Identities = 43/50 (86%) Strand = Plus / Plus Query: 351 ctgttcagtgagcatggcaaagtggtcgatgccagggtcgtctacgacag 400 |||||||||||||| || | ||| ||||||||| |||| |||||||||| Sbjct: 51571 ctgttcagtgagcagggaaccgtgctcgatgccaaggtcatctacgacag 51620
>gb|AY105580.1| Zea mays PCO127552 mRNA sequence Length = 1133 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 132 agccgtggattcgggtttgtcaccatg 158 |||||||||||||||||||| |||||| Sbjct: 425 agccgtggattcgggtttgtgaccatg 451
>ref|XM_470714.1| Oryza sativa (japonica cultivar-group), mRNA Length = 798 Score = 44.1 bits (22), Expect = 0.46 Identities = 73/90 (81%) Strand = Plus / Plus Query: 23 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 82 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 267 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 326 Query: 83 cggcgtcgtcgaggtctccgaggtcatcta 112 |||| ||||||| | |||||||||||| Sbjct: 327 cggctccgtcgagatggtcgaggtcatcta 356
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 tcggcaacctgccctacgacgt 46 |||||||||||||||||||||| Sbjct: 3815253 tcggcaacctgccctacgacgt 3815274
>ref|XM_384017.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03841.1) partial mRNA Length = 3492 Score = 44.1 bits (22), Expect = 0.46 Identities = 31/34 (91%) Strand = Plus / Plus Query: 400 gagacactgggcgctcacgaggcttcggtttcgt 433 |||| ||||| |||||| |||||||||||||||| Sbjct: 113 gagatactggtcgctcaagaggcttcggtttcgt 146
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 40952 actgtaaacaaggcagctccaagagg 40927 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 40763 cgtggattcgggtttgtcac 40744 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gccatcgctgccctcgatggacag 488 |||||| ||||||||||||||||| Sbjct: 40715 gccatctctgccctcgatggacag 40692
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project) Length = 125803 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 14556 actgtaaacaaggcagctccaagagg 14581 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacag 488 |||||| ||||||||||||||||| Sbjct: 14793 gccatctctgccctcgatggacag 14816 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 14745 cgtggattcgggtttgtcac 14764
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 11528 actgtaaacaaggcagctccaagagg 11503 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 11339 cgtggattcgggtttgtcac 11320 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 465 gccatcgctgccctcgatggacag 488 |||||| ||||||||||||||||| Sbjct: 11291 gccatctctgccctcgatggacag 11268
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 tcggcaacctgccctacgacgt 46 |||||||||||||||||||||| Sbjct: 1630918 tcggcaacctgccctacgacgt 1630897
>gb|AE011966.1| Xanthomonas axonopodis pv. citri str. 306, section 344 of 469 of the complete genome Length = 14190 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 tcggcaacctgccctacgacgt 46 |||||||||||||||||||||| Sbjct: 9607 tcggcaacctgccctacgacgt 9628
>gb|AE012422.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 330 of 460 of the complete genome Length = 10431 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 tcggcaacctgccctacgacgt 46 |||||||||||||||||||||| Sbjct: 9972 tcggcaacctgccctacgacgt 9993
>gb|U38483.1|DCU38483 Dianthus caryophyllus (CEBP-1) mRNA, complete cds Length = 1217 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 474 gccctcgatggacagagcttggaggg 499 |||||||||||| ||||||||||||| Sbjct: 893 gccctcgatggagagagcttggaggg 918
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 tcggcaacctgccctacgacgt 46 |||||||||||||||||||||| Sbjct: 1301245 tcggcaacctgccctacgacgt 1301224
>emb|BX826929.1|CNS0A47C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZD03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1170 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 739 actgtaaacaaggcagctccaagagg 764 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 472 ctgccctcgatggacagagcttggaggg 499 ||||||||||||||||| ||||||||| Sbjct: 983 ctgccctcgatggacagtacttggaggg 1010 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 928 cgtggattcgggtttgtcac 947
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 cgaggtctccgaggtcatctacaacc 117 |||||||||||||||| ||||||||| Sbjct: 382775 cgaggtctccgaggtcctctacaacc 382800
>dbj|AK109412.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-G07, full insert sequence Length = 1112 Score = 44.1 bits (22), Expect = 0.46 Identities = 73/90 (81%) Strand = Plus / Plus Query: 23 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 82 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 350 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 409 Query: 83 cggcgtcgtcgaggtctccgaggtcatcta 112 |||| ||||||| | |||||||||||| Sbjct: 410 cggctccgtcgagatggtcgaggtcatcta 439
>dbj|D31712.1|ATHCP31C Arabidopsis thaliana gene for chloroplast RNA-binding protein cp31, complete cds (exon1, exon2, exon3, exon4) Length = 4135 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 2690 actgtaaacaaggcagctccaagagg 2715 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacag 488 |||||| ||||||||||||||||| Sbjct: 2927 gccatctctgccctcgatggacag 2950 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 2879 cgtggattcgggtttgtcac 2898
>dbj|AK068720.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169L09, full insert sequence Length = 1172 Score = 44.1 bits (22), Expect = 0.46 Identities = 73/90 (81%) Strand = Plus / Plus Query: 23 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 82 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 358 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 417 Query: 83 cggcgtcgtcgaggtctccgaggtcatcta 112 |||| ||||||| | |||||||||||| Sbjct: 418 cggctccgtcgagatggtcgaggtcatcta 447
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 tcggcaacctgccctacgacgt 46 |||||||||||||||||||||| Sbjct: 1648745 tcggcaacctgccctacgacgt 1648724
>gb|U08467.1|ATU08467 Arabidopsis thaliana chloroplast RNA-binding proteins 1, 2, and 3 gene, complete cds Length = 2716 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 actgtaaacaaggcagctcctagagg 253 |||||||||||||||||||| ||||| Sbjct: 1870 actgtaaacaaggcagctccaagagg 1895 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 465 gccatcgctgccctcgatggacag 488 |||||| ||||||||||||||||| Sbjct: 2107 gccatctctgccctcgatggacag 2130 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cgtggattcgggtttgtcac 154 |||||||||||||||||||| Sbjct: 2059 cgtggattcgggtttgtcac 2078
>gb|BC109272.1| Homo sapiens jumonji domain containing 4, mRNA (cDNA clone MGC:129896 IMAGE:40027777), complete cds Length = 2335 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 807 cggcaacctgccctacgacgt 827
>ref|XM_514250.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ12517 (LOC457793), mRNA Length = 1248 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 807 cggcaacctgccctacgacgt 827
>ref|XM_368259.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00985.4) partial mRNA Length = 1365 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tacgtcggcaacctgccctacgacg 45 |||||||||||||| |||||||||| Sbjct: 730 tacgtcggcaacctcccctacgacg 754
>ref|NM_023007.1| Homo sapiens jumonji domain containing 4 (JMJD4), mRNA Length = 2550 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 807 cggcaacctgccctacgacgt 827
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 23 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 82 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 14706585 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 14706526 Query: 83 cggcgtcgtcgag 95 |||| ||||||| Sbjct: 14706525 cggctccgtcgag 14706513
>gb|BC067081.1| Homo sapiens cDNA clone IMAGE:3608201, partial cds Length = 2146 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 1335 cggcaacctgccctacgacgt 1315
>gb|AF370397.1| Homo sapiens PP10752 mRNA, complete cds Length = 1528 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 721 cggcaacctgccctacgacgt 701
>emb|AL136378.14| Human DNA sequence from clone RP5-870F10 on chromosome 1q42.11-42.3 Contains a novel zinc finger protein pseudogne, two novel genes (FLJ12517), the 5' end of the gene for SVAP1 protein and three CpG islands, complete sequence Length = 84657 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 39605 cggcaacctgccctacgacgt 39585
>emb|AJ720781.1| Gallus gallus mRNA for hypothetical protein, clone 25g18 Length = 1575 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 ggcaacctgccctacgacgtc 47 ||||||||||||||||||||| Sbjct: 321 ggcaacctgccctacgacgtc 341
>emb|AJ224325.1|HVH224325 Hordeum vulgare cv. Haisa mRNA for cp33Hv protein Length = 1311 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tacgtcggcaacctgccctac 41 ||||||||||||||||||||| Sbjct: 379 tacgtcggcaacctgccctac 399
>gb|AC117397.2| Homo sapiens 3 BAC RP11-92D20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 128398 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 tcattcaggatctatgtgggc 311 ||||||||||||||||||||| Sbjct: 19340 tcattcaggatctatgtgggc 19360
>dbj|AK093736.1| Homo sapiens cDNA FLJ36417 fis, clone THYMU2011063 Length = 2205 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 1420 cggcaacctgccctacgacgt 1400
>dbj|AK055266.1| Homo sapiens cDNA FLJ30704 fis, clone FCBBF2001105 Length = 2375 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 1590 cggcaacctgccctacgacgt 1570
>dbj|AK023030.1| Homo sapiens cDNA FLJ12968 fis, clone NT2RP2005815 Length = 2480 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 785 cggcaacctgccctacgacgt 805
>dbj|AK022579.1| Homo sapiens cDNA FLJ12517 fis, clone NT2RM2001784 Length = 2550 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 807 cggcaacctgccctacgacgt 827
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 23 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 82 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 45497 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 45438 Query: 83 cggcgtcgtcgag 95 |||| ||||||| Sbjct: 45437 cggctccgtcgag 45425
>gb|BC011928.2| Homo sapiens jumonji domain containing 4, mRNA (cDNA clone IMAGE:4544682), complete cds Length = 2450 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 679 cggcaacctgccctacgacgt 699
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 23 cgtcggcaacctgccctacgacgtcgacagcgagcgcctcgcgcagctcttcgagcaggc 82 ||||||||||||||||| | ||||||||||| | ||||| |||||||||||||| Sbjct: 14701119 cgtcggcaacctgcccttcagcgtcgacagcgcccagctcgccggcctcttcgagcaggc 14701060 Query: 83 cggcgtcgtcgag 95 |||| ||||||| Sbjct: 14701059 cggctccgtcgag 14701047
>dbj|AK026908.1| Homo sapiens cDNA: FLJ23255 fis, clone COL05420 Length = 3757 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 cggcaacctgccctacgacgt 46 ||||||||||||||||||||| Sbjct: 812 cggcaacctgccctacgacgt 832
>gb|M24634.1|RANATROA R.temporaria skeletal muscle alpha-tropomyosin mRNA, complete cds Length = 1037 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 ttgaggaggctgagaaggctg 186 ||||||||||||||||||||| Sbjct: 447 ttgaggaggctgagaaggctg 467
>gb|AC159917.3| Aotus nancymaae clone CH258-526A6, complete sequence Length = 165172 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cattgaggaggctgagaagg 183 |||||||||||||||||||| Sbjct: 162575 cattgaggaggctgagaagg 162594
>ref|XM_524308.1| PREDICTED: Pan troglodytes LOC468923 (LOC468923), mRNA Length = 2154 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttcgagcaggccggcgtcg 90 |||||||||||||||||||| Sbjct: 930 cttcgagcaggccggcgtcg 949
>ref|XM_476202.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 315 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgcc 37 |||||||||||||||||||| Sbjct: 73 gtgtacgtcggcaacctgcc 92
>ref|XM_476204.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 309 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgcc 37 |||||||||||||||||||| Sbjct: 58 gtgtacgtcggcaacctgcc 77
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 gcgagcgcctcgcgcagctcttcg 75 |||||||||||||||||| ||||| Sbjct: 532759 gcgagcgcctcgcgcagcccttcg 532736
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 tgacgccatcgctgccctcg 480 |||||||||||||||||||| Sbjct: 693548 tgacgccatcgctgccctcg 693529
>gb|AC159319.2| Mus musculus BAC clone RP23-37C8 from chromosome 9, complete sequence Length = 175636 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 352 tgttcagtgagcatggcaaagtgg 375 ||||||||||||||||| |||||| Sbjct: 43720 tgttcagtgagcatggccaagtgg 43697
>gb|AY625727.1| Vanmanenia pingchowensis cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tgagaaggctgtagagatgt 195 |||||||||||||||||||| Sbjct: 192 tgagaaggctgtagagatgt 173
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 61 tcgcgcagctcttcgagcaggccggcgt 88 ||||||||||||||||||| | |||||| Sbjct: 177834 tcgcgcagctcttcgagcatgtcggcgt 177861
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gcgagcgcctcgcgcagctc 71 |||||||||||||||||||| Sbjct: 2246638 gcgagcgcctcgcgcagctc 2246657
>gb|DQ105219.1| Vanmanenia pingchowensis haplotype 2 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 1140 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tgagaaggctgtagagatgt 195 |||||||||||||||||||| Sbjct: 192 tgagaaggctgtagagatgt 173
>ref|XM_539217.2| PREDICTED: Canis familiaris similar to solute carrier family 39 (zinc transporter), member 4 isoform 2 (LOC482096), mRNA Length = 2016 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 cgacgtcgacagcgagcgcc 60 |||||||||||||||||||| Sbjct: 1753 cgacgtcgacagcgagcgcc 1734
>gb|AC123069.4| Mus musculus BAC clone RP23-23B21 from 9, complete sequence Length = 162961 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 352 tgttcagtgagcatggcaaagtgg 375 ||||||||||||||||| |||||| Sbjct: 30227 tgttcagtgagcatggccaagtgg 30250
>gb|AC098878.3| Mus musculus BAC clone RP23-2G23 from 4, complete sequence Length = 209021 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gacagagacactgggcgctc 415 |||||||||||||||||||| Sbjct: 49028 gacagagacactgggcgctc 49009
>gb|BC057785.1| Homo sapiens radial spokehead-like 1, mRNA (cDNA clone IMAGE:5270908), partial cds Length = 2327 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttcgagcaggccggcgtcg 90 |||||||||||||||||||| Sbjct: 929 cttcgagcaggccggcgtcg 948
>ref|NM_030785.2| Homo sapiens radial spokehead-like 1 (RSHL1), mRNA Length = 2477 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttcgagcaggccggcgtcg 90 |||||||||||||||||||| Sbjct: 1073 cttcgagcaggccggcgtcg 1092
>emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on chromosome 22, complete sequence Length = 124990 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 tgaggaggctgagaaggctg 186 |||||||||||||||||||| Sbjct: 80267 tgaggaggctgagaaggctg 80286
>emb|AL031257.1|HS796I11 Human DNA sequence from clone RP4-796I11 on chromosome 20q12 Contains the 5' end of the TIX1 gene for triple homeobox 1 and a CpG island, complete sequence Length = 77402 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 cctcgatggacagagcttgg 495 |||||||||||||||||||| Sbjct: 50340 cctcgatggacagagcttgg 50321
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gcgagcgcctcgcgcagctc 71 |||||||||||||||||||| Sbjct: 902055 gcgagcgcctcgcgcagctc 902036
>gb|AC148205.3| Callicebus moloch clone LB5-314H24, complete sequence Length = 153386 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cattgaggaggctgagaagg 183 |||||||||||||||||||| Sbjct: 40894 cattgaggaggctgagaagg 40913
>emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 10/10 Length = 140057 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gcaggccggcgtcgtcgagg 96 |||||||||||||||||||| Sbjct: 100716 gcaggccggcgtcgtcgagg 100697
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 gcgagcgcctcgcgcagctc 71 |||||||||||||||||||| Sbjct: 407980 gcgagcgcctcgcgcagctc 407999
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ctcttcgagcaggccggcgt 88 |||||||||||||||||||| Sbjct: 55827 ctcttcgagcaggccggcgt 55808
>emb|AL844848.12| Mouse DNA sequence from clone RP23-247N5 on chromosome 4 Contains part of the Ptprd gene for receptor type protein tyrosine phosphatase D and a CpG island, complete sequence Length = 199012 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gacagagacactgggcgctc 415 |||||||||||||||||||| Sbjct: 6418 gacagagacactgggcgctc 6399
>emb|AL136761.1|HSM801729 Homo sapiens mRNA; cDNA DKFZp434I0515 (from clone DKFZp434I0515) Length = 2478 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttcgagcaggccggcgtcg 90 |||||||||||||||||||| Sbjct: 1073 cttcgagcaggccggcgtcg 1092
>gb|AC011530.6| Homo sapiens chromosome 19 clone LLNLR-227G9, complete sequence Length = 45572 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttcgagcaggccggcgtcg 90 |||||||||||||||||||| Sbjct: 3934 cttcgagcaggccggcgtcg 3953
>dbj|AK093068.1| Homo sapiens cDNA FLJ35749 fis, clone TESTI2004490, moderately similar to Strongylocentrotus purpuratus radial spokehead mRNA Length = 1750 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttcgagcaggccggcgtcg 90 |||||||||||||||||||| Sbjct: 371 cttcgagcaggccggcgtcg 390
>gb|AC092301.2| Homo sapiens chromosome 19 clone LLNLF-198C12, complete sequence Length = 38888 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 cttcgagcaggccggcgtcg 90 |||||||||||||||||||| Sbjct: 11439 cttcgagcaggccggcgtcg 11420
>dbj|AB063332.1| Delftia acidovorans plasmid pUO1 DNA, complete sequence Length = 67066 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 ggcaaagtggtcgatgccag 385 |||||||||||||||||||| Sbjct: 13848 ggcaaagtggtcgatgccag 13867
>dbj|AB049198.1| Delftia acidovorans plasmid pUO1 transposon TnHad2 (carrying TnHad1) genes, complete cds Length = 15604 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 ggcaaagtggtcgatgccag 385 |||||||||||||||||||| Sbjct: 12947 ggcaaagtggtcgatgccag 12966
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gcgagcgcctcgcgcagctc 71 |||||||||||||||||||| Sbjct: 4378037 gcgagcgcctcgcgcagctc 4378018
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gcgagcgcctcgcgcagctc 71 |||||||||||||||||||| Sbjct: 1580112 gcgagcgcctcgcgcagctc 1580093
>ref|XM_624098.1| PREDICTED: Apis mellifera similar to ENSANGP00000022029 (LOC551709), mRNA Length = 3417 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 atgttccatcgctacgatgtgaat 215 |||||||||||||| ||||||||| Sbjct: 1528 atgttccatcgctaagatgtgaat 1505
>dbj|AK223347.1| Homo sapiens mRNA for radial spokehead-like 1 variant, clone: TST05604 Length = 2371 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttcgagcaggccggcgtcg 90 |||||||||||||||||||| Sbjct: 1046 cttcgagcaggccggcgtcg 1065
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 gcaggccggcgtcgtcgagg 96 |||||||||||||||||||| Sbjct: 3270060 gcaggccggcgtcgtcgagg 3270041
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 cgagcgcctcgcgcagctcttcga 76 |||||||||||||||| ||||||| Sbjct: 2942363 cgagcgcctcgcgcaggtcttcga 2942340
>gb|AY390427.1| Oryctolagus cuniculus ras GTPase-activating-like protein IQGAP2 mRNA, complete cds Length = 4861 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gcaacctgccctacgacgtc 47 |||||||||||||||||||| Sbjct: 3107 gcaacctgccctacgacgtc 3126
>dbj|AB024031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K6A12 Length = 64136 Score = 40.1 bits (20), Expect = 7.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 210 gtgaatgggaggctgttgactgtaaacaaggcagctcctagagg 253 ||||||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 47819 gtgaatgggaggcgtttgacagtaaacagagcagctccaagagg 47776
>dbj|AK098837.1| Homo sapiens cDNA FLJ25971 fis, clone TST05604 Length = 2425 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 cttcgagcaggccggcgtcg 90 |||||||||||||||||||| Sbjct: 1046 cttcgagcaggccggcgtcg 1065
>dbj|AK106308.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C12, full insert sequence Length = 785 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 gtgtacgtcggcaacctgcc 37 |||||||||||||||||||| Sbjct: 171 gtgtacgtcggcaacctgcc 190
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 tcgcgcagctcttcgagcag 80 |||||||||||||||||||| Sbjct: 808934 tcgcgcagctcttcgagcag 808915
>gb|AY105955.1| Zea mays PCO121693 mRNA sequence Length = 1004 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cattgaggaggctgagaagg 183 |||||||||||||||||||| Sbjct: 508 cattgaggaggctgagaagg 527
>emb|AL359238.4|CNS05TEP Human chromosome 14 DNA sequence BAC R-452D21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166870 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cattgaggaggctgagaagg 183 |||||||||||||||||||| Sbjct: 89861 cattgaggaggctgagaagg 89880
>gb|AC148186.3| Saimiri boliviensis boliviensis clone CH254-359M10, complete sequence Length = 189199 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cattgaggaggctgagaagg 183 |||||||||||||||||||| Sbjct: 38885 cattgaggaggctgagaagg 38904
>gb|U77121.1|FSU77121 Fundulus sciadicus cytochrome b (cytb) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 357 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tgagaaggctgtagagatgt 195 |||||||||||||||||||| Sbjct: 192 tgagaaggctgtagagatgt 173
>gb|AF012788.1|AF012788 Channa pleurophthalma PLE1 cytochrome b (cytb) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 306 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tgagaaggctgtagagatgt 195 |||||||||||||||||||| Sbjct: 96 tgagaaggctgtagagatgt 77
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cattgaggaggctgagaagg 183 |||||||||||||||||||| Sbjct: 955446 cattgaggaggctgagaagg 955465
>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete sequence Length = 172826 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 ctaggttggtggagctgttc 356 |||||||||||||||||||| Sbjct: 29755 ctaggttggtggagctgttc 29736 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,579,908 Number of Sequences: 3902068 Number of extensions: 3579908 Number of successful extensions: 73121 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71592 Number of HSP's gapped (non-prelim): 1523 length of query: 526 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 503 effective length of database: 17,143,297,704 effective search space: 8623078745112 effective search space used: 8623078745112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)