ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3a07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z26322.1|HVALAAT H.vulgare mRNA for alanine aminotransferase Length = 1701 Score = 967 bits (488), Expect = 0.0 Identities = 488/488 (100%) Strand = Plus / Plus Query: 95 cagtgctgattctatttctcgagcaaagcagattcttgccatgatacctggaagagcaac 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cagtgctgattctatttctcgagcaaagcagattcttgccatgatacctggaagagcaac 420 Query: 155 aggagcatacagccatagccagggtattaaaggacttcgtgatgcaattgcttctgggat 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggagcatacagccatagccagggtattaaaggacttcgtgatgcaattgcttctgggat 480 Query: 215 cgcttcacgagatggattccctgctaatgctgatgacatttttctcacagatggagcaag 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 cgcttcacgagatggattccctgctaatgctgatgacatttttctcacagatggagcaag 540 Query: 275 tcctggggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttgt 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 tcctggggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttgt 600 Query: 335 cccgattcctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttgt 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 cccgattcctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttgt 660 Query: 395 cccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagca 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 cccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagca 720 Query: 455 acttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatccagg 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 acttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatccagg 780 Query: 515 aaatccaactggacaggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaa 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 aaatccaactggacaggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaa 840 Query: 575 aaatgagg 582 |||||||| Sbjct: 841 aaatgagg 848
>gb|AY103725.1| Zea mays PCO103969 mRNA sequence Length = 1867 Score = 476 bits (240), Expect = e-131 Identities = 426/488 (87%) Strand = Plus / Plus Query: 95 cagtgctgattctatttctcgagcaaagcagattcttgccatgatacctggaagagcaac 154 |||||||||| | |||||||||||||||||||||||||| | || |||||| | ||||| Sbjct: 494 cagtgctgatgcaatttctcgagcaaagcagattcttgcaactattcctggacgggcaac 553 Query: 155 aggagcatacagccatagccagggtattaaaggacttcgtgatgcaattgcttctgggat 214 ||| ||||| || || || |||||||| |||||||| ||||||||||||||| ||||||| Sbjct: 554 aggtgcatatagtcacagtcagggtatcaaaggactgcgtgatgcaattgctgctgggat 613 Query: 215 cgcttcacgagatggattccctgctaatgctgatgacatttttctcacagatggagcaag 274 | | ||||| || ||||||||||| ||||| ||||||||||| | ||||| |||||||| Sbjct: 614 cacctcacgtgacggattccctgcaaatgcagatgacattttcattacagacggagcaag 673 Query: 275 tcctggggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttgt 334 ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 674 tcctggggtccacatgatgatgcaattactgattaggaatgagaaagatggcattctgtg 733 Query: 335 cccgattcctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttgt 394 ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 734 cccaattcctcagtaccccttgtactcggcctccatagctcttcatggtggagctcttgt 793 Query: 395 cccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagca 454 ||| || || || ||||| || || ||||||||||| | ||||||| ||||||| || Sbjct: 794 cccctattaccttgatgaaaaaactgggtggggtttggagatctctgatcttaagaaaca 853 Query: 455 acttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatccagg 514 ||| |||||||||||||||| |||||| | |||||||| |||||||||||||||||||| Sbjct: 854 actcgaagatgctcggtcaaaaggcattgatgttagggccttggtggttatcaatccagg 913 Query: 515 aaatccaactggacaggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaa 574 |||||| ||||| ||||| ||||||||||| ||||||||||| |||||||| ||||| || Sbjct: 914 aaatccgactgggcaggttcttgctgaagacaaccaatatgatatagtgaaattctgtaa 973 Query: 575 aaatgagg 582 |||||||| Sbjct: 974 aaatgagg 981
>emb|X69421.1|PMPALAAT2 P. miliaceum mRNA for alanine aminotransferase Length = 1869 Score = 460 bits (232), Expect = e-126 Identities = 424/488 (86%) Strand = Plus / Plus Query: 95 cagtgctgattctatttctcgagcaaagcagattcttgccatgatacctggaagagcaac 154 |||||||||| |||||||||||||||||||||||||| | | || || ||||||||||| Sbjct: 361 cagtgctgatgctatttctcgagcaaagcagattctttctactattccaggaagagcaac 420 Query: 155 aggagcatacagccatagccagggtattaaaggacttcgtgatgcaattgcttctgggat 214 || |||||||| || ||||||||||| |||||||| ||||||||||||||| ||||||| Sbjct: 421 cggtgcatacagtcacagccagggtatcaaaggactccgtgatgcaattgctgctgggat 480 Query: 215 cgcttcacgagatggattccctgctaatgctgatgacatttttctcacagatggagcaag 274 || ||||| |||||||||||||| ||||| ||||||||||| | || || || ||||| Sbjct: 481 tgcgtcacgtgatggattccctgcaaatgcagatgacattttcgtaactgacggcgcaag 540 Query: 275 tcctggggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttgt 334 ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 541 tcctggggtgcacatgatgatgcaattactgataaggaatgagaaagacggcattctgtg 600 Query: 335 cccgattcctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttgt 394 ||| |||||||||||||| |||||||| || ||||||||||||||||| ||| ||||||| Sbjct: 601 cccaattcctcagtaccctttgtactcagcctccatagctcttcatggtggaactcttgt 660 Query: 395 cccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagca 454 ||| || || || ||||| || || ||||||||||| | ||||||| |||||||||| Sbjct: 661 cccctattaccttgatgaaaaaaccgggtggggtttggagatctctgatcttaagaagca 720 Query: 455 acttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatccagg 514 ||| |||||||||||||| | |||||| | |||||||| ||||||||||||||||| || Sbjct: 721 actcgaagatgctcggtctaaaggcattgatgttagggccttggtggttatcaatcctgg 780 Query: 515 aaatccaactggacaggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaa 574 |||||||||||| ||||| |||||||| || ||||||| ||||||||||| |||||||| Sbjct: 781 aaatccaactgggcaggttcttgctgaggacaaccaatgtgacatagtgagattctgcaa 840 Query: 575 aaatgagg 582 |||||||| Sbjct: 841 aaatgagg 848
>ref|NM_196284.1| Oryza sativa (japonica cultivar-group) putative alanine aminotransferase (OSJNBb0061I18.10), mRNA Length = 1455 Score = 406 bits (205), Expect = e-110 Identities = 420/489 (85%), Gaps = 2/489 (0%) Strand = Plus / Plus Query: 95 cagtgctgattctatttctcgagcaa-agcagattcttgccatgatacctggaagagcaa 153 |||||||||| | ||||||||||||| | || ||||||||| ||| ||||||||||||| Sbjct: 273 cagtgctgatgccatttctcgagcaacaaca-attcttgcctcgattcctggaagagcaa 331 Query: 154 caggagcatacagccatagccagggtattaaaggacttcgtgatgcaattgcttctggga 213 | |||||||||||||| |||||||| || ||||| || ||||||||||||||| |||| | Sbjct: 332 ctggagcatacagccacagccagggcatcaaagggctgcgtgatgcaattgctgctggaa 391 Query: 214 tcgcttcacgagatggattccctgctaatgctgatgacatttttctcacagatggagcaa 273 | || ||||| || |||| |||||| ||||| || |||||||| || || || ||||||| Sbjct: 392 ttgcatcacgtgacggataccctgcaaatgcagacgacattttccttactgacggagcaa 451 Query: 274 gtcctggggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttg 333 | ||||| || ||| |||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 452 gccctggagttcacatgatgatgcagttactgataaggaacgagaaagatggcattctct 511 Query: 334 tcccgattcctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttg 393 ||| |||||||| || || |||||||| || ||||| ||||||||||| |||||||||| Sbjct: 512 gcccaattcctcaatatcctttgtactcagcctccattgctcttcatggtggagctcttg 571 Query: 394 tcccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagc 453 |||| || ||||| |||||||| || |||||||||||||| | |||||| ||||||||| Sbjct: 572 tcccgtattatcttaatgaatcaacaggctggggtttggagatctctgaccttaagaagc 631 Query: 454 aacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatccag 513 |||| |||||| |||||| | |||||| | |||||||||||||| ||||||||||||| Sbjct: 632 aactcgaagattctcggttgaaaggcattgatgttagggctttggtagttatcaatccag 691 Query: 514 gaaatccaactggacaggtacttgctgaagaaaaccaatatgacatagtgaagttctgca 573 ||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||| Sbjct: 692 gaaatccaactgggcaggttcttgctgaggaaaaccaacgggacatagtgaagttctgca 751 Query: 574 aaaatgagg 582 ||||||||| Sbjct: 752 aaaatgagg 760
>dbj|AK102488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094M23, full insert sequence Length = 1190 Score = 406 bits (205), Expect = e-110 Identities = 420/489 (85%), Gaps = 2/489 (0%) Strand = Plus / Plus Query: 95 cagtgctgattctatttctcgagcaa-agcagattcttgccatgatacctggaagagcaa 153 |||||||||| | ||||||||||||| | || ||||||||| ||| ||||||||||||| Sbjct: 520 cagtgctgatgccatttctcgagcaacaaca-attcttgcctcgattcctggaagagcaa 578 Query: 154 caggagcatacagccatagccagggtattaaaggacttcgtgatgcaattgcttctggga 213 | |||||||||||||| |||||||| || ||||| || ||||||||||||||| |||| | Sbjct: 579 ctggagcatacagccacagccagggcatcaaagggctgcgtgatgcaattgctgctggaa 638 Query: 214 tcgcttcacgagatggattccctgctaatgctgatgacatttttctcacagatggagcaa 273 | || ||||| || |||| |||||| ||||| || |||||||| || || || ||||||| Sbjct: 639 ttgcatcacgtgacggataccctgcaaatgcagacgacattttccttactgacggagcaa 698 Query: 274 gtcctggggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttg 333 | ||||| || ||| |||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 699 gccctggagttcacatgatgatgcagttactgataaggaacgagaaagatggcattctct 758 Query: 334 tcccgattcctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttg 393 ||| |||||||| || || |||||||| || ||||| ||||||||||| |||||||||| Sbjct: 759 gcccaattcctcaatatcctttgtactcagcctccattgctcttcatggtggagctcttg 818 Query: 394 tcccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagc 453 |||| || ||||| |||||||| || |||||||||||||| | |||||| ||||||||| Sbjct: 819 tcccgtattatcttaatgaatcaacaggctggggtttggagatctctgaccttaagaagc 878 Query: 454 aacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatccag 513 |||| |||||| |||||| | |||||| | |||||||||||||| ||||||||||||| Sbjct: 879 aactcgaagattctcggttgaaaggcattgatgttagggctttggtagttatcaatccag 938 Query: 514 gaaatccaactggacaggtacttgctgaagaaaaccaatatgacatagtgaagttctgca 573 ||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||| Sbjct: 939 gaaatccaactgggcaggttcttgctgaggaaaaccaacgggacatagtgaagttctgca 998 Query: 574 aaaatgagg 582 ||||||||| Sbjct: 999 aaaatgagg 1007
>dbj|AB007405.1| Oryza sativa mRNA for alanine aminotransferase, complete cds Length = 1821 Score = 406 bits (205), Expect = e-110 Identities = 420/489 (85%), Gaps = 2/489 (0%) Strand = Plus / Plus Query: 95 cagtgctgattctatttctcgagcaa-agcagattcttgccatgatacctggaagagcaa 153 |||||||||| | ||||||||||||| | || ||||||||| ||| ||||||||||||| Sbjct: 338 cagtgctgatgccatttctcgagcaacaaca-attcttgcctcgattcctggaagagcaa 396 Query: 154 caggagcatacagccatagccagggtattaaaggacttcgtgatgcaattgcttctggga 213 | |||||||||||||| |||||||| || ||||| || ||||||||||||||| |||| | Sbjct: 397 ctggagcatacagccacagccagggcatcaaagggctgcgtgatgcaattgctgctggaa 456 Query: 214 tcgcttcacgagatggattccctgctaatgctgatgacatttttctcacagatggagcaa 273 | || ||||| || |||| |||||| ||||| || |||||||| || || || ||||||| Sbjct: 457 ttgcatcacgtgacggataccctgcaaatgcagacgacattttccttactgacggagcaa 516 Query: 274 gtcctggggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttg 333 | ||||| || ||| |||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 517 gccctggagttcacatgatgatgcagttactgataaggaacgagaaagatggcattctct 576 Query: 334 tcccgattcctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttg 393 ||| |||||||| || || |||||||| || ||||| ||||||||||| |||||||||| Sbjct: 577 gcccaattcctcaatatcctttgtactcagcctccattgctcttcatggtggagctcttg 636 Query: 394 tcccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagc 453 |||| || ||||| |||||||| || |||||||||||||| | |||||| ||||||||| Sbjct: 637 tcccgtattatcttaatgaatcaacaggctggggtttggagatctctgaccttaagaagc 696 Query: 454 aacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatccag 513 |||| |||||| |||||| | |||||| | |||||||||||||| ||||||||||||| Sbjct: 697 aactcgaagattctcggttgaaaggcattgatgttagggctttggtagttatcaatccag 756 Query: 514 gaaatccaactggacaggtacttgctgaagaaaaccaatatgacatagtgaagttctgca 573 ||||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||||| Sbjct: 757 gaaatccaactgggcaggttcttgctgaggaaaaccaacgggacatagtgaagttctgca 816 Query: 574 aaaatgagg 582 ||||||||| Sbjct: 817 aaaatgagg 825
>ref|XM_470564.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 238 bits (120), Expect = 2e-59 Identities = 389/476 (81%), Gaps = 2/476 (0%) Strand = Plus / Plus Query: 100 ctgattctatttctcgagcaaagcagattcttgccatgatacctggaagagcaacaggag 159 ||||| ||||| |||| |||||| | |||||| ||||||| ||||||||||| || || | Sbjct: 308 ctgatgctattgctcgggcaaagaaaattctttccatgattcctggaagagccaccgggg 367 Query: 160 catacagccatagccagggtattaaaggacttcgtgatgcaattgcttctgggatcgctt 219 |||| || |||||||||||||| || ||||| ||||||| |||||| ||||||| || | Sbjct: 368 catatagtcatagccagggtatcaagggactgcgtgatgagattgctgctgggattgcct 427 Query: 220 cacgagatggattccctgctaatgctgatgacatttttctcacagatggagcaagtcctg 279 | || ||||| |||||||| ||||| ||||| || || || || ||||||||||||||| Sbjct: 428 cccgtgatggtttccctgcaaatgcagatgatatattcctaactaatggagcaagtcctg 487 Query: 280 gggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattct-tgtcccg 338 | || ||| |||||||||| || ||||||||||| | | |||||||||| | ||| || Sbjct: 488 gtgtacacatgatgatgcagttgctgataaggaacaacagagatggcattatgtgt-cca 546 Query: 339 attcctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttgtccca 398 |||||||| ||| | |||||||| || ||| |||| |||||||||||||||||||| ||| Sbjct: 547 attcctcaatactcattgtactcagcatccctagcacttcatggcggagctcttgtgcca 606 Query: 399 tactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagcaactt 458 || ||||| ||||||| | || ||||||||||| ||| | ||||||| |||||| Sbjct: 607 tattatcttgatgaatcctcaggatggggtttggaggtttctaagcttaagaatcaactt 666 Query: 459 gaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatccaggaaat 518 |||||||| |||||| |||||| | |||||||| |||||||| |||||||| |||||| Sbjct: 667 gaagatgccaggtcaaaaggcataactgttagggcgttggtggtgatcaatcctggaaat 726 Query: 519 ccaactggacaggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaa 574 || ||||||||| | |||| ||| || | |||||||| |||| ||||||||||| Sbjct: 727 cctactggacagattcttgatgagcaacagcaatatgagctagtaaagttctgcaa 782
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Minus Query: 393 gtcccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaag 452 ||||| || ||||| |||||||| || |||||||||||||| | |||||| |||||||| Sbjct: 49158 gtcccgtattatcttaatgaatcaacaggctggggtttggagatctctgaccttaagaag 49099 Query: 453 caacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatcca 512 ||||| |||||| |||||| | |||||| | |||||||||||||| |||||||||||| Sbjct: 49098 caactcgaagattctcggttgaaaggcattgatgttagggctttggtagttatcaatcca 49039 Query: 513 ggaaatccaactggacaggt 532 |||||||||||||| ||||| Sbjct: 49038 ggaaatccaactgggcaggt 49019 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 289 tgatgatgcaattactgataaggaatgagaaagatggcattcttgtcccgattcctcagt 348 |||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||| | Sbjct: 49344 tgatgatgcagttactgataaggaacgagaaagatggcattctctgcccaattcctcaat 49285 Query: 349 accccttgtactcggcttccatagctcttcatggcggagctcttgt 394 | || |||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 49284 atcctttgtactcagcctccattgctcttcatggtggagctcttgt 49239 Score = 75.8 bits (38), Expect = 1e-10 Identities = 76/86 (88%), Gaps = 2/86 (2%) Strand = Plus / Minus Query: 93 tgcagtgctgattctatttctcgagcaa-agcagattcttgccatgatacctggaagagc 151 |||||||||||| | ||||||||||||| | || ||||||||| ||| ||||||||||| Sbjct: 49721 tgcagtgctgatgccatttctcgagcaacaaca-attcttgcctcgattcctggaagagc 49663 Query: 152 aacaggagcatacagccatagccagg 177 ||| |||||||||||||| ||||||| Sbjct: 49662 aactggagcatacagccacagccagg 49637 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 528 caggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaaaaatgagg 582 ||||| |||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 48778 caggttcttgctgaggaaaaccaacgggacatagtgaagttctgcaaaaatgagg 48724 Score = 60.0 bits (30), Expect = 9e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 183 aaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatggattccctgctaat 242 ||||| || ||||||||||||||| |||| || || ||||| || |||| |||||| ||| Sbjct: 49551 aaagggctgcgtgatgcaattgctgctggaattgcatcacgtgacggataccctgcaaat 49492 Query: 243 gctgatgacatttttctcacagatggagcaagtcctgg 280 || || |||||||| || || || |||||||| ||||| Sbjct: 49491 gcagacgacattttccttactgacggagcaagccctgg 49454 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 174 cagggtattaaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatgg 229 ||||||||| |||| | ||||||||||||||| |||| || ||||| || ||||| Sbjct: 41860 cagggtattgaagggttgcgtgatgcaattgctgctggaatagcttctcgcgatgg 41805
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 393 gtcccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaag 452 ||||| || ||||| |||||||| || |||||||||||||| | |||||| |||||||| Sbjct: 12455017 gtcccgtattatcttaatgaatcaacaggctggggtttggagatctctgaccttaagaag 12455076 Query: 453 caacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatcca 512 ||||| |||||| |||||| | |||||| | |||||||||||||| |||||||||||| Sbjct: 12455077 caactcgaagattctcggttgaaaggcattgatgttagggctttggtagttatcaatcca 12455136 Query: 513 ggaaatccaactggacaggt 532 |||||||||||||| ||||| Sbjct: 12455137 ggaaatccaactgggcaggt 12455156 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 289 tgatgatgcaattactgataaggaatgagaaagatggcattcttgtcccgattcctcagt 348 |||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||| | Sbjct: 12454831 tgatgatgcagttactgataaggaacgagaaagatggcattctctgcccaattcctcaat 12454890 Query: 349 accccttgtactcggcttccatagctcttcatggcggagctcttgt 394 | || |||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 12454891 atcctttgtactcagcctccattgctcttcatggtggagctcttgt 12454936 Score = 75.8 bits (38), Expect = 1e-10 Identities = 76/86 (88%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 93 tgcagtgctgattctatttctcgagcaa-agcagattcttgccatgatacctggaagagc 151 |||||||||||| | ||||||||||||| | || ||||||||| ||| ||||||||||| Sbjct: 12454454 tgcagtgctgatgccatttctcgagcaacaaca-attcttgcctcgattcctggaagagc 12454512 Query: 152 aacaggagcatacagccatagccagg 177 ||| |||||||||||||| ||||||| Sbjct: 12454513 aactggagcatacagccacagccagg 12454538 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 528 caggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaaaaatgagg 582 ||||| |||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 12455397 caggttcttgctgaggaaaaccaacgggacatagtgaagttctgcaaaaatgagg 12455451 Score = 60.0 bits (30), Expect = 9e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 183 aaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatggattccctgctaat 242 ||||| || ||||||||||||||| |||| || || ||||| || |||| |||||| ||| Sbjct: 12454624 aaagggctgcgtgatgcaattgctgctggaattgcatcacgtgacggataccctgcaaat 12454683 Query: 243 gctgatgacatttttctcacagatggagcaagtcctgg 280 || || |||||||| || || || |||||||| ||||| Sbjct: 12454684 gcagacgacattttccttactgacggagcaagccctgg 12454721 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 174 cagggtattaaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatgg 229 ||||||||| |||| | ||||||||||||||| |||| || ||||| || ||||| Sbjct: 12462315 cagggtattgaagggttgcgtgatgcaattgctgctggaatagcttctcgcgatgg 12462370
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 393 gtcccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaag 452 ||||| || ||||| |||||||| || |||||||||||||| | |||||| |||||||| Sbjct: 12462357 gtcccgtattatcttaatgaatcaacaggctggggtttggagatctctgaccttaagaag 12462416 Query: 453 caacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatcca 512 ||||| |||||| |||||| | |||||| | |||||||||||||| |||||||||||| Sbjct: 12462417 caactcgaagattctcggttgaaaggcattgatgttagggctttggtagttatcaatcca 12462476 Query: 513 ggaaatccaactggacaggt 532 |||||||||||||| ||||| Sbjct: 12462477 ggaaatccaactgggcaggt 12462496 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 289 tgatgatgcaattactgataaggaatgagaaagatggcattcttgtcccgattcctcagt 348 |||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||| | Sbjct: 12462171 tgatgatgcagttactgataaggaacgagaaagatggcattctctgcccaattcctcaat 12462230 Query: 349 accccttgtactcggcttccatagctcttcatggcggagctcttgt 394 | || |||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 12462231 atcctttgtactcagcctccattgctcttcatggtggagctcttgt 12462276 Score = 75.8 bits (38), Expect = 1e-10 Identities = 76/86 (88%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 93 tgcagtgctgattctatttctcgagcaa-agcagattcttgccatgatacctggaagagc 151 |||||||||||| | ||||||||||||| | || ||||||||| ||| ||||||||||| Sbjct: 12461794 tgcagtgctgatgccatttctcgagcaacaaca-attcttgcctcgattcctggaagagc 12461852 Query: 152 aacaggagcatacagccatagccagg 177 ||| |||||||||||||| ||||||| Sbjct: 12461853 aactggagcatacagccacagccagg 12461878 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 528 caggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaaaaatgagg 582 ||||| |||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 12462737 caggttcttgctgaggaaaaccaacgggacatagtgaagttctgcaaaaatgagg 12462791 Score = 60.0 bits (30), Expect = 9e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 183 aaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatggattccctgctaat 242 ||||| || ||||||||||||||| |||| || || ||||| || |||| |||||| ||| Sbjct: 12461964 aaagggctgcgtgatgcaattgctgctggaattgcatcacgtgacggataccctgcaaat 12462023 Query: 243 gctgatgacatttttctcacagatggagcaagtcctgg 280 || || |||||||| || || || |||||||| ||||| Sbjct: 12462024 gcagacgacattttccttactgacggagcaagccctgg 12462061 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 174 cagggtattaaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatgg 229 ||||||||| |||| | ||||||||||||||| |||| || ||||| || ||||| Sbjct: 12469655 cagggtattgaagggttgcgtgatgcaattgctgctggaatagcttctcgcgatgg 12469710
>dbj|AB007404.1| Oryza sativa gene for alanine aminotransferase, complete cds Length = 9289 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 393 gtcccatactatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaag 452 ||||| || ||||| |||||||| || |||||||||||||| | |||||| |||||||| Sbjct: 5298 gtcccgtattatcttaatgaatcaacaggctggggtttggagatctctgaccttaagaag 5357 Query: 453 caacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggttatcaatcca 512 ||||| |||||| |||||| | |||||| | |||||||||||||| |||||||||||| Sbjct: 5358 caactcgaagattctcggttgaaaggcattgatgttagggctttggtagttatcaatcca 5417 Query: 513 ggaaatccaactggacaggt 532 |||||||||||||| ||||| Sbjct: 5418 ggaaatccaactgggcaggt 5437 Score = 107 bits (54), Expect = 4e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 289 tgatgatgcaattactgataaggaatgagaaagatggcattcttgtcccgattcctcagt 348 |||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||| | Sbjct: 5112 tgatgatgcagttactgataaggaacgagaaagatggcattctctgcccaattcctcaat 5171 Query: 349 accccttgtactcggcttccatagctcttcatggcggagctcttgt 394 | || |||||||| || ||||| ||||||||||| ||||||||||| Sbjct: 5172 atcctttgtactcagcctccattgctcttcatggtggagctcttgt 5217 Score = 75.8 bits (38), Expect = 1e-10 Identities = 76/86 (88%), Gaps = 2/86 (2%) Strand = Plus / Plus Query: 93 tgcagtgctgattctatttctcgagcaa-agcagattcttgccatgatacctggaagagc 151 |||||||||||| | ||||||||||||| | || ||||||||| ||| ||||||||||| Sbjct: 4735 tgcagtgctgatgccatttctcgagcaacaaca-attcttgcctcgattcctggaagagc 4793 Query: 152 aacaggagcatacagccatagccagg 177 ||| |||||||||||||| ||||||| Sbjct: 4794 aactggagcatacagccacagccagg 4819 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 528 caggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaaaaatgagg 582 ||||| |||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 5678 caggttcttgctgaggaaaaccaacgggacatagtgaagttctgcaaaaatgagg 5732 Score = 60.0 bits (30), Expect = 9e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 183 aaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatggattccctgctaat 242 ||||| || ||||||||||||||| |||| || || ||||| || |||| |||||| ||| Sbjct: 4905 aaagggctgcgtgatgcaattgctgctggaattgcatcacgtgacggataccctgcaaat 4964 Query: 243 gctgatgacatttttctcacagatggagcaagtcctgg 280 || || |||||||| || || || |||||||| ||||| Sbjct: 4965 gcagacgacattttccttactgacggagcaagccctgg 5002
>gb|AF055898.1|AF055898 Zea mays alanine aminotransferase (alt) gene, complete cds Length = 6176 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 289 tgatgatgcaattactgataaggaatgagaaagatggcattcttgtcccgattcctcagt 348 ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| |||| Sbjct: 3792 tgatgatgcaattactgattaggaatgagaaagatggcattctgtgcccaattccccagt 3851 Query: 349 accccttgtactcggcttccatagctcttcatgg 382 |||| |||||||| || ||||||||||||||||| Sbjct: 3852 accctttgtactcagcctccatagctcttcatgg 3885 Score = 107 bits (54), Expect = 4e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 175 agggtattaaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatggattcc 234 ||||||| |||||||| ||||||||||||||| |||| ||| ||||| |||||||||| Sbjct: 3580 agggtatcaaaggactgcgtgatgcaattgctgctggaatcatgtcacgtgatggattcc 3639 Query: 235 ctgctaatgctgatgacatttttctcacagatggagcaagtcctggggtg 284 |||| ||||| ||||||||||| | ||||| |||||||||||||||||| Sbjct: 3640 ctgcaaatgcagatgacattttcattacagacggagcaagtcctggggtg 3689 Score = 91.7 bits (46), Expect = 2e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 423 tggggtttggaaacctctgatgttaagaagcaacttgaagatgctcggtcaagaggcatc 482 ||||||||||| | |||||| |||||| || ||| ||||||| |||||||| |||||| Sbjct: 4019 tggggtttggagatttctgattttaagacgcgactggaagatgttcggtcaaaaggcatt 4078 Query: 483 aacgttagggctttggtggttatcaatccaggaaatccaactggacaggt 532 | |||||||| ||||||||||||||||||||||||| ||||| ||||| Sbjct: 4079 gatgttagggccctggtggttatcaatccaggaaatccgactgggcaggt 4128 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 93 tgcagtgctgattctatttctcgagcaaagcagattcttgccatgatacctggaagagca 152 |||||||||||| |||||||||||||||||||||||||||| | || |||||||| ||| Sbjct: 3416 tgcagtgctgatgctatttctcgagcaaagcagattcttgcaactattcctggaagggca 3475 Query: 153 acaggagcata 163 ||||| ||||| Sbjct: 3476 acaggtgcata 3486 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 529 aggtacttgctgaagaaaaccaatatgacatagtgaagttctgcaaaaatgagg 582 |||| ||||||||||| ||||||||||| |||||||| |||||||||||||||| Sbjct: 4422 aggttcttgctgaagacaaccaatatgatatagtgaaattctgcaaaaatgagg 4475
>ref|NM_105892.3| Arabidopsis thaliana ALAAT2 (ALANINE AMINOTRANSFERASE 2); 1-aminocyclopropane-1-carboxylate synthase/ alanine transaminase/ transferase, transferrin> AT1G72330 (ALAAT2) mRNA, complete cds Length = 1961 Score = 101 bits (51), Expect = 3e-18 Identities = 318/407 (78%) Strand = Plus / Plus Query: 144 ggaagagcaacaggagcatacagccatagccagggtattaaaggacttcgtgatgcaatt 203 ||||||||||| || || ||||| |||||||||||||| || || | ||||||| |||| Sbjct: 629 ggaagagcaactggggcttacagtcatagccagggtatcaagggtttacgtgatgtaatt 688 Query: 204 gcttctgggatcgcttcacgagatggattccctgctaatgctgatgacatttttctcaca 263 || |||| |||| |||| ||||| ||||||||| || | |||| ||||| | || Sbjct: 689 gcagctggaatcgaagcacgtgatggtttccctgctgatccaaatgatattttcttgact 748 Query: 264 gatggagcaagtcctggggtgcacctgatgatgcaattactgataaggaatgagaaagat 323 ||||| |||||||| | ||| ||| ||||||||||| | || | || ||||||||| Sbjct: 749 gatggtgcaagtccagcggttcacatgatgatgcaacttctcttgagctcagagaaagat 808 Query: 324 ggcattcttgtcccgattcctcagtaccccttgtactcggcttccatagctcttcatggc 383 || |||||| ||||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 809 ggtattctttccccgattcctcagtatccattgtactcggcttcaattgcccttcatggt 868 Query: 384 ggagctcttgtcccatactatctcaatgaatcgacgggctggggtttggaaacctctgat 443 ||| || | || || |||||||| ||||| | || || ||||| |||||| ||||| Sbjct: 869 ggatctttggttccgtactatcttgatgaagcaacaggatggggactggaaatatctgac 928 Query: 444 gttaagaagcaacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggtt 503 ||||||||||||| || || ||| |||| | |||||| || ||||| ||||| || Sbjct: 929 cttaagaagcaactagaggaagctaggtccaagggcatctctgtaagggccttggttgtc 988 Query: 504 atcaatccaggaaatccaactggacaggtacttgctgaagaaaacca 550 || || || || || |||||||| ||||| ||||| ||||||||||| Sbjct: 989 ataaaccccggtaacccaactgggcaggttcttgcggaagaaaacca 1035
>emb|BX814009.1|CNS0AC6A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1913 Score = 101 bits (51), Expect = 3e-18 Identities = 318/407 (78%) Strand = Plus / Plus Query: 144 ggaagagcaacaggagcatacagccatagccagggtattaaaggacttcgtgatgcaatt 203 ||||||||||| || || ||||| |||||||||||||| || || | ||||||| |||| Sbjct: 623 ggaagagcaactggggcttacagtcatagccagggtatcaagggtttacgtgatgtaatt 682 Query: 204 gcttctgggatcgcttcacgagatggattccctgctaatgctgatgacatttttctcaca 263 || |||| |||| |||| ||||| ||||||||| || | |||| ||||| | || Sbjct: 683 gcagctggaatcgaagcacgtgatggtttccctgctgatccaaatgatattttcttgact 742 Query: 264 gatggagcaagtcctggggtgcacctgatgatgcaattactgataaggaatgagaaagat 323 ||||| |||||||| | ||| ||| ||||||||||| | || | || ||||||||| Sbjct: 743 gatggtgcaagtccagcggttcacatgatgatgcaacttctcttgagctcagagaaagat 802 Query: 324 ggcattcttgtcccgattcctcagtaccccttgtactcggcttccatagctcttcatggc 383 || |||||| ||||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 803 ggtattctttccccgattcctcagtatccattgtactcggcttcaattgcccttcatggt 862 Query: 384 ggagctcttgtcccatactatctcaatgaatcgacgggctggggtttggaaacctctgat 443 ||| || | || || |||||||| ||||| | || || ||||| |||||| ||||| Sbjct: 863 ggatctttggttccgtactatcttgatgaagcaacaggatggggactggaaatatctgac 922 Query: 444 gttaagaagcaacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggtt 503 ||||||||||||| || || ||| |||| | |||||| || ||||| ||||| || Sbjct: 923 cttaagaagcaactagaggaagctaggtccaagggcatctctgtaagggccttggttgtc 982 Query: 504 atcaatccaggaaatccaactggacaggtacttgctgaagaaaacca 550 || || || || || |||||||| ||||| ||||| ||||||||||| Sbjct: 983 ataaaccccggtaacccaactgggcaggttcttgcggaagaaaacca 1029
>emb|BX817586.1|CNS0AALJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1862 Score = 101 bits (51), Expect = 3e-18 Identities = 318/407 (78%) Strand = Plus / Plus Query: 144 ggaagagcaacaggagcatacagccatagccagggtattaaaggacttcgtgatgcaatt 203 ||||||||||| || || ||||| |||||||||||||| || || | ||||||| |||| Sbjct: 630 ggaagagcaactggggcttacagtcatagccagggtatcaagggtttacgtgatgtaatt 689 Query: 204 gcttctgggatcgcttcacgagatggattccctgctaatgctgatgacatttttctcaca 263 || |||| |||| |||| ||||| ||||||||| || | |||| ||||| | || Sbjct: 690 gcagctggaatcgaagcacgtgatggtttccctgctgatccaaatgatattttcttgact 749 Query: 264 gatggagcaagtcctggggtgcacctgatgatgcaattactgataaggaatgagaaagat 323 ||||| |||||||| | ||| ||| ||||||||||| | || | || ||||||||| Sbjct: 750 gatggtgcaagtccagcggttcacatgatgatgcaacttctcttgagctcagagaaagat 809 Query: 324 ggcattcttgtcccgattcctcagtaccccttgtactcggcttccatagctcttcatggc 383 || |||||| ||||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 810 ggtattctttccccgattcctcagtatccattgtactcggcttcaattgcccttcatggt 869 Query: 384 ggagctcttgtcccatactatctcaatgaatcgacgggctggggtttggaaacctctgat 443 ||| || | || || |||||||| ||||| | || || ||||| |||||| ||||| Sbjct: 870 ggatctttggttccgtactatcttgatgaagcaacaggatggggactggaaatatctgac 929 Query: 444 gttaagaagcaacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggtt 503 ||||||||||||| || || ||| |||| | |||||| || ||||| ||||| || Sbjct: 930 cttaagaagcaactagaggaagctaggtccaagggcatctctgtaagggccttggttgtc 989 Query: 504 atcaatccaggaaatccaactggacaggtacttgctgaagaaaacca 550 || || || || || |||||||| ||||| ||||| ||||||||||| Sbjct: 990 ataaaccccggtaacccaactgggcaggttcttgcggaagaaaacca 1036
>gb|AF275371.1|AF275371 Arabidopsis thaliana alanine aminotransferase (ALAAT2) mRNA, complete cds Length = 1829 Score = 101 bits (51), Expect = 3e-18 Identities = 318/407 (78%) Strand = Plus / Plus Query: 144 ggaagagcaacaggagcatacagccatagccagggtattaaaggacttcgtgatgcaatt 203 ||||||||||| || || ||||| |||||||||||||| || || | ||||||| |||| Sbjct: 623 ggaagagcaactggggcttacagtcatagccagggtatcaagggtttacgtgatgtaatt 682 Query: 204 gcttctgggatcgcttcacgagatggattccctgctaatgctgatgacatttttctcaca 263 || |||| |||| |||| ||||| ||||||||| || | |||| ||||| | || Sbjct: 683 gcagctggaatcgaagcacgtgatggtttccctgctgatccaaatgatattttcttgact 742 Query: 264 gatggagcaagtcctggggtgcacctgatgatgcaattactgataaggaatgagaaagat 323 ||||| |||||||| | ||| ||| ||||||||||| | || | || ||||||||| Sbjct: 743 gatggtgcaagtccagcggttcacatgatgatgcaacttctcttgagctcagagaaagat 802 Query: 324 ggcattcttgtcccgattcctcagtaccccttgtactcggcttccatagctcttcatggc 383 || |||||| ||||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 803 ggtattctttccccgattcctcagtatccattgtactcggcttcaattgcccttcatggt 862 Query: 384 ggagctcttgtcccatactatctcaatgaatcgacgggctggggtttggaaacctctgat 443 ||| || | || || |||||||| ||||| | || || ||||| |||||| ||||| Sbjct: 863 ggatctttggttccgtactatcttgatgaagcaacaggatggggactggaaatatctgac 922 Query: 444 gttaagaagcaacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggtt 503 ||||||||||||| || || ||| |||| | |||||| || ||||| ||||| || Sbjct: 923 cttaagaagcaactagaggaagctaggtccaagggcatctctgtaagggccttggttgtc 982 Query: 504 atcaatccaggaaatccaactggacaggtacttgctgaagaaaacca 550 || || || || || |||||||| ||||| ||||| ||||||||||| Sbjct: 983 ataaaccccggtaacccaactgggcaggttcttgcggaagaaaacca 1029
>ref|XM_479171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 95.6 bits (48), Expect = 2e-16 Identities = 153/188 (81%) Strand = Plus / Plus Query: 144 ggaagagcaacaggagcatacagccatagccagggtattaaaggacttcgtgatgcaatt 203 ||||||||||||||||| || |||||||| |||||||| || || | ||||||| |||| Sbjct: 328 ggaagagcaacaggagcctatagccatagtcagggtataaagggtttgcgtgatgaaatt 387 Query: 204 gcttctgggatcgcttcacgagatggattccctgctaatgctgatgacatttttctcaca 263 ||| |||| || ||| | || ||||| || | ||||| || ||| |||| || || ||| Sbjct: 388 gctgctggaattgctgcccgtgatggttttcatgctagtggagataacatattcctaaca 447 Query: 264 gatggagcaagtcctggggtgcacctgatgatgcaattactgataaggaatgagaaagat 323 ||||||||||| || | |||||| |||||||||||||| ||||||| |||||| ||| Sbjct: 448 gatggagcaagcccagcagtgcacatgatgatgcaattattgataagatctgagaatgat 507 Query: 324 ggcattct 331 |||||||| Sbjct: 508 ggcattct 515
>gb|AY035086.1| Arabidopsis thaliana putative alanine aminotransferase (At1g72330) mRNA, partial cds Length = 1806 Score = 93.7 bits (47), Expect = 6e-16 Identities = 317/407 (77%) Strand = Plus / Plus Query: 144 ggaagagcaacaggagcatacagccatagccagggtattaaaggacttcgtgatgcaatt 203 ||||||||||| || || ||||| |||||||||||||| || || | ||||||| |||| Sbjct: 468 ggaagagcaactggggcttacagtcatagccagggtatcaagggtttacgtgatgtaatt 527 Query: 204 gcttctgggatcgcttcacgagatggattccctgctaatgctgatgacatttttctcaca 263 || |||| |||| |||| ||||| ||||||||| || | |||| ||||| | || Sbjct: 528 gcagctggaatcgaagcacgtgatggtttccctgctgatccaaatgatattttcttgact 587 Query: 264 gatggagcaagtcctggggtgcacctgatgatgcaattactgataaggaatgagaaagat 323 ||||| |||||||| | ||| ||| ||||||||||| | || | || ||||||||| Sbjct: 588 gatggtgcaagtccagcggttcacatgatgatgcaacttctcttgagctcagagaaagat 647 Query: 324 ggcattcttgtcccgattcctcagtaccccttgtactcggcttccatagctcttcatggc 383 || |||||| ||||||||||||||| || |||||||||||||| || || |||||||| Sbjct: 648 ggtattctttccccgattcctcagtatccattgtactcggcttcaattgcccttcatggt 707 Query: 384 ggagctcttgtcccatactatctcaatgaatcgacgggctggggtttggaaacctctgat 443 ||| || | || || |||||||| ||||| | || || ||||| |||||| ||||| Sbjct: 708 ggatctttggttccgtactatcttgatgaagcaacaggatggggactggaaatatctgac 767 Query: 444 gttaagaagcaacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggtt 503 || |||||||||| || || ||| |||| | |||||| || ||||| ||||| || Sbjct: 768 cttgagaagcaactagaggaagctaggtccaagggcatctctgtaagggccttggttgtc 827 Query: 504 atcaatccaggaaatccaactggacaggtacttgctgaagaaaacca 550 || || || || || |||||||| ||||| ||||| ||||||||||| Sbjct: 828 ataaaccccggtaacccaactgggcaggttcttgcggaagaaaacca 874
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 445 ttaagaagcaacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggtta 504 ||||||| |||||||||||||| |||||| |||||| | |||||||| |||||||| | Sbjct: 4369405 ttaagaatcaacttgaagatgccaggtcaaaaggcataactgttagggcgttggtggtga 4369346 Query: 505 tcaatccaggaaatccaactggacaggt 532 ||||||| |||||||| ||||||||||| Sbjct: 4369345 tcaatcctggaaatcctactggacaggt 4369318 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/107 (84%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 289 tgatgatgcaattactgataaggaatgagaaagatggcattct-tgtcccgattcctcag 347 |||||||||| || ||||||||||| | | |||||||||| | ||||| |||||||| Sbjct: 4369643 tgatgatgcagttgctgataaggaacaacagagatggcattatgtgtcca-attcctcaa 4369585 Query: 348 taccccttgtactcggcttccatagctcttcatggcggagctcttgt 394 ||| | |||||||| || ||| |||| |||||||||||||||||||| Sbjct: 4369584 tactcattgtactcagcatccctagcacttcatggcggagctcttgt 4369538 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 100 ctgattctatttctcgagcaaagcagattcttgccatgatacctggaagagcaacaggag 159 ||||| ||||| |||| |||||| | |||||| ||||||| ||||||||||| || || | Sbjct: 4370288 ctgatgctattgctcgggcaaagaaaattctttccatgattcctggaagagccaccgggg 4370229 Query: 160 catacagccatagccagg 177 |||| || |||||||||| Sbjct: 4370228 catatagtcatagccagg 4370211 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 175 agggtattaaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatggattcc 234 ||||||| || ||||| ||||||| |||||| ||||||| || || || ||||| |||| Sbjct: 4369835 agggtatcaagggactgcgtgatgagattgctgctgggattgcctcccgtgatggtttcc 4369776 Query: 235 ctgctaatgctgatgacatttttctcacagatggagcaagtcctgg 280 |||| ||||| ||||| || || || || |||||||||||||||| Sbjct: 4369775 ctgcaaatgcagatgatatattcctaactaatggagcaagtcctgg 4369730
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 445 ttaagaagcaacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggtta 504 ||||||| |||||||||||||| |||||| |||||| | |||||||| |||||||| | Sbjct: 57092 ttaagaatcaacttgaagatgccaggtcaaaaggcataactgttagggcgttggtggtga 57151 Query: 505 tcaatccaggaaatccaactggacaggt 532 ||||||| |||||||| ||||||||||| Sbjct: 57152 tcaatcctggaaatcctactggacaggt 57179 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/107 (84%), Gaps = 2/107 (1%) Strand = Plus / Plus Query: 289 tgatgatgcaattactgataaggaatgagaaagatggcattct-tgtcccgattcctcag 347 |||||||||| || ||||||||||| | | |||||||||| | ||||| |||||||| Sbjct: 56854 tgatgatgcagttgctgataaggaacaacagagatggcattatgtgtcca-attcctcaa 56912 Query: 348 taccccttgtactcggcttccatagctcttcatggcggagctcttgt 394 ||| | |||||||| || ||| |||| |||||||||||||||||||| Sbjct: 56913 tactcattgtactcagcatccctagcacttcatggcggagctcttgt 56959 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 175 agggtattaaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatggattcc 234 ||||||| || ||||| ||||||| |||||| ||||||| || || || ||||| |||| Sbjct: 56662 agggtatcaagggactgcgtgatgagattgctgctgggattgcctcccgtgatggtttcc 56721 Query: 235 ctgctaatgctgatgacatttttctcacagatggagcaagtcctgg 280 |||| ||||| ||||| || || || || |||||||||||||||| Sbjct: 56722 ctgcaaatgcagatgatatattcctaactaatggagcaagtcctgg 56767 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 100 ctgattctatttctcgagcaaagcagattcttgccatgatacctggaagagcaacaggag 159 ||||| ||||| |||| |||||| | |||||| ||||||| ||||||||||| || || | Sbjct: 56209 ctgatgctattgctcgggcaaagaaaattctttccatgattcctggaagagccaccgggg 56268 Query: 160 catacagccatagccagg 177 |||| || |||||||||| Sbjct: 56269 catatagtcatagccagg 56286
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 445 ttaagaagcaacttgaagatgctcggtcaagaggcatcaacgttagggctttggtggtta 504 ||||||| |||||||||||||| |||||| |||||| | |||||||| |||||||| | Sbjct: 4369520 ttaagaatcaacttgaagatgccaggtcaaaaggcataactgttagggcgttggtggtga 4369461 Query: 505 tcaatccaggaaatccaactggacaggt 532 ||||||| |||||||| ||||||||||| Sbjct: 4369460 tcaatcctggaaatcctactggacaggt 4369433 Score = 61.9 bits (31), Expect = 2e-06 Identities = 90/107 (84%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 289 tgatgatgcaattactgataaggaatgagaaagatggcattct-tgtcccgattcctcag 347 |||||||||| || ||||||||||| | | |||||||||| | ||||| |||||||| Sbjct: 4369758 tgatgatgcagttgctgataaggaacaacagagatggcattatgtgtcca-attcctcaa 4369700 Query: 348 taccccttgtactcggcttccatagctcttcatggcggagctcttgt 394 ||| | |||||||| || ||| |||| |||||||||||||||||||| Sbjct: 4369699 tactcattgtactcagcatccctagcacttcatggcggagctcttgt 4369653 Score = 60.0 bits (30), Expect = 9e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 100 ctgattctatttctcgagcaaagcagattcttgccatgatacctggaagagcaacaggag 159 ||||| ||||| |||| |||||| | |||||| ||||||| ||||||||||| || || | Sbjct: 4370403 ctgatgctattgctcgggcaaagaaaattctttccatgattcctggaagagccaccgggg 4370344 Query: 160 catacagccatagccagg 177 |||| || |||||||||| Sbjct: 4370343 catatagtcatagccagg 4370326 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/106 (82%) Strand = Plus / Minus Query: 175 agggtattaaaggacttcgtgatgcaattgcttctgggatcgcttcacgagatggattcc 234 ||||||| || ||||| ||||||| |||||| ||||||| || || || ||||| |||| Sbjct: 4369950 agggtatcaagggactgcgtgatgagattgctgctgggattgcctcccgtgatggtttcc 4369891 Query: 235 ctgctaatgctgatgacatttttctcacagatggagcaagtcctgg 280 |||| ||||| ||||| || || || || |||||||||||||||| Sbjct: 4369890 ctgcaaatgcagatgatatattcctaactaatggagcaagtcctgg 4369845
>gb|BT013062.1| Lycopersicon esculentum clone 114318F, mRNA sequence Length = 2081 Score = 79.8 bits (40), Expect = 9e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 141 cctggaagagcaacaggagcatacagccatagccagggtattaaaggacttcgtgatgca 200 ||||| ||||||||||| ||||||||||| || |||||||| |||||| | |||||| || Sbjct: 616 cctggtagagcaacaggtgcatacagccacagtcagggtatcaaaggattacgtgataca 675 Query: 201 attgcttctgggatcg 216 ||||||||||| |||| Sbjct: 676 attgcttctggtatcg 691 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 483 aacgttagggctttggtggttatcaatccaggaaatccaactggacaggtacttgctga 541 |||||||||||||||| || ||||||||||| || |||||||| ||||| || ||||| Sbjct: 958 aacgttagggctttggctgtgatcaatccaggcaacccaactgggcaggttctcgctga 1016
>gb|AC016529.7|AC016529 Arabidopsis thaliana chromosome 1 BAC T10D10 genomic sequence, complete sequence Length = 87039 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 315 gagaaagatggcattcttgtcccgattcctcagtaccccttgtactcggcttccatagct 374 ||||||||||| |||||| ||||||||||||||| || |||||||||||||| || || Sbjct: 78098 gagaaagatggtattctttccccgattcctcagtatccattgtactcggcttcaattgcc 78039 Query: 375 cttcatgg 382 |||||||| Sbjct: 78038 cttcatgg 78031
>ref|NM_101591.4| Arabidopsis thaliana ALAAT1 (ALANINE AMINOTRANSFERAS); 1-aminocyclopropane-1-carboxylate synthase/ alanine transaminase/ transferase, transferring n> AT1G17290 (ALAAT1) mRNA, complete cds Length = 2055 Score = 60.0 bits (30), Expect = 9e-06 Identities = 249/322 (77%) Strand = Plus / Plus Query: 162 tacagccatagccagggtattaaaggacttcgtgatgcaattgcttctgggatcgcttca 221 |||||||| ||||||||||| || || | ||||||||||||||| ||| |||| | Sbjct: 633 tacagccacagccagggtatcaaggggttacgtgatgcaattgctgatggaatcgaagcc 692 Query: 222 cgagatggattccctgctaatgctgatgacatttttctcacagatggagcaagtcctggg 281 || ||||| ||||||||| || || |||| || || | |||||||| |||||||| ||| Sbjct: 693 cgtgatggtttccctgctgatcctaatgatatattcatgacagatggtgcaagtccaggg 752 Query: 282 gtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttgtcccgatt 341 || || ||||||||||| | || |||| ||||||||||| || ||| || ||| Sbjct: 753 gttcatatgatgatgcaacttctcataacttcagagaaagatggaatcctttgtcctatt 812 Query: 342 cctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttgtcccatac 401 |||||||| || |||||||| ||||| || || ||||| || ||| || | || |||||| Sbjct: 813 cctcagtatccattgtactcagcttcaattgcccttcacggtggaactttggttccatac 872 Query: 402 tatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagcaacttgaa 461 || || ||||| | | || |||||| | |||| ||||| | ||||| ||||||||| Sbjct: 873 taccttgatgaagcatcaggatggggtcttgaaatatctgagctgaagaaacaacttgaa 932 Query: 462 gatgctcggtcaagaggcatca 483 |||||| |||||| ||||||| Sbjct: 933 gatgctaggtcaaagggcatca 954
>gb|AY039970.1| Arabidopsis thaliana putative alanine aminotransferase (At1g17290) mRNA, partial cds Length = 1929 Score = 60.0 bits (30), Expect = 9e-06 Identities = 249/322 (77%) Strand = Plus / Plus Query: 162 tacagccatagccagggtattaaaggacttcgtgatgcaattgcttctgggatcgcttca 221 |||||||| ||||||||||| || || | ||||||||||||||| ||| |||| | Sbjct: 513 tacagccacagccagggtatcaaggggttacgtgatgcaattgctgatggaatcgaagcc 572 Query: 222 cgagatggattccctgctaatgctgatgacatttttctcacagatggagcaagtcctggg 281 || ||||| ||||||||| || || |||| || || | |||||||| |||||||| ||| Sbjct: 573 cgtgatggtttccctgctgatcctaatgatatattcatgacagatggtgcaagtccaggg 632 Query: 282 gtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttgtcccgatt 341 || || ||||||||||| | || |||| ||||||||||| || ||| || ||| Sbjct: 633 gttcatatgatgatgcaacttctcataacttcagagaaagatggaatcctttgtcctatt 692 Query: 342 cctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttgtcccatac 401 |||||||| || |||||||| ||||| || || ||||| || ||| || | || |||||| Sbjct: 693 cctcagtatccattgtactcagcttcaattgcccttcacggtggaactttggttccatac 752 Query: 402 tatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagcaacttgaa 461 || || ||||| | | || |||||| | |||| ||||| | ||||| ||||||||| Sbjct: 753 taccttgatgaagcatcaggatggggtcttgaaatatctgagctgaagaaacaacttgaa 812 Query: 462 gatgctcggtcaagaggcatca 483 |||||| |||||| ||||||| Sbjct: 813 gatgctaggtcaaagggcatca 834
>gb|AF275372.1|AF275372 Arabidopsis thaliana alanine aminotransferase (ALAAT1) mRNA, complete cds Length = 2024 Score = 60.0 bits (30), Expect = 9e-06 Identities = 249/322 (77%) Strand = Plus / Plus Query: 162 tacagccatagccagggtattaaaggacttcgtgatgcaattgcttctgggatcgcttca 221 |||||||| ||||||||||| || || | ||||||||||||||| ||| |||| | Sbjct: 633 tacagccacagccagggtatcaaggggttacgtgatgcaattgctgatggaatcgaagcc 692 Query: 222 cgagatggattccctgctaatgctgatgacatttttctcacagatggagcaagtcctggg 281 || ||||| ||||||||| || || |||| || || | |||||||| |||||||| ||| Sbjct: 693 cgtgatggtttccctgctgatcctaatgatatattcatgacagatggtgcaagtccaggg 752 Query: 282 gtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttgtcccgatt 341 || || ||||||||||| | || |||| ||||||||||| || ||| || ||| Sbjct: 753 gttcatatgatgatgcaacttctcataacttcagagaaagatggaatcctttgtcctatt 812 Query: 342 cctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttgtcccatac 401 |||||||| || |||||||| ||||| || || ||||| || ||| || | || |||||| Sbjct: 813 cctcagtatccattgtactcagcttcaattgcccttcacggtggaactttggttccatac 872 Query: 402 tatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagcaacttgaa 461 || || ||||| | | || |||||| | |||| ||||| | ||||| ||||||||| Sbjct: 873 taccttgatgaagcatcaggatggggtcttgaaatatctgagctgaagaaacaacttgaa 932 Query: 462 gatgctcggtcaagaggcatca 483 |||||| |||||| ||||||| Sbjct: 933 gatgctaggtcaaagggcatca 954
>gb|AY342007.1| Capsicum annuum alanine aminotransferase (AlaAT) mRNA, complete cds Length = 1858 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 141 cctggaagagcaacaggagcatacagccatagccagggtattaaaggacttcgtgatgca 200 ||||| |||||||| || ||||||||||| || |||||||| |||||| | ||||| || Sbjct: 428 cctgggagagcaactggtgcatacagccacagtcagggtataaaaggattacgtgacaca 487 Query: 201 attgcttctgg 211 || |||||||| Sbjct: 488 atcgcttctgg 498 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 484 acgttagggctttggtggttatcaatccaggaaatccaactggacaggtacttg 537 |||||||||||||||| || |||||||| || || |||||||| ||||| |||| Sbjct: 771 acgttagggctttggttgtgatcaatccgggcaacccaactgggcaggttcttg 824
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 281 ggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattct 331 ||||||| |||||||||||||| ||||||| |||||| ||||||||||| Sbjct: 25441728 ggtgcacatgatgatgcaattattgataagatctgagaatgatggcattct 25441678 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 144 ggaagagcaacaggagcatacagccatagccagg 177 ||||||||||||||||| || |||||||| |||| Sbjct: 25442093 ggaagagcaacaggagcctatagccatagtcagg 25442060
>dbj|AP004988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1056G08 Length = 168173 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 281 ggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattct 331 ||||||| |||||||||||||| ||||||| |||||| ||||||||||| Sbjct: 134818 ggtgcacatgatgatgcaattattgataagatctgagaatgatggcattct 134768 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 144 ggaagagcaacaggagcatacagccatagccagg 177 ||||||||||||||||| || |||||||| |||| Sbjct: 135183 ggaagagcaacaggagcctatagccatagtcagg 135150
>dbj|AP004308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0552F09 Length = 134659 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 281 ggtgcacctgatgatgcaattactgataaggaatgagaaagatggcattct 331 ||||||| |||||||||||||| ||||||| |||||| ||||||||||| Sbjct: 65445 ggtgcacatgatgatgcaattattgataagatctgagaatgatggcattct 65395 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 144 ggaagagcaacaggagcatacagccatagccagg 177 ||||||||||||||||| || |||||||| |||| Sbjct: 65810 ggaagagcaacaggagcctatagccatagtcagg 65777
>gb|BT014732.1| Arabidopsis thaliana At1g17290.1 mRNA sequence Length = 1629 Score = 52.0 bits (26), Expect = 0.002 Identities = 248/322 (77%) Strand = Plus / Plus Query: 162 tacagccatagccagggtattaaaggacttcgtgatgcaattgcttctgggatcgcttca 221 |||||||| ||||||||||| || || | ||||||||||||||| ||| |||| | Sbjct: 514 tacagccacagccagggtatcaaggggttacgtgatgcaattgctgatggaatcgaagcc 573 Query: 222 cgagatggattccctgctaatgctgatgacatttttctcacagatggagcaagtcctggg 281 | ||||| ||||||||| || || |||| || || | |||||||| |||||||| ||| Sbjct: 574 tgtgatggtttccctgctgatcctaatgatatattcatgacagatggtgcaagtccaggg 633 Query: 282 gtgcacctgatgatgcaattactgataaggaatgagaaagatggcattcttgtcccgatt 341 || || ||||||||||| | || |||| ||||||||||| || ||| || ||| Sbjct: 634 gttcatatgatgatgcaacttctcataacttcagagaaagatggaatcctttgtcctatt 693 Query: 342 cctcagtaccccttgtactcggcttccatagctcttcatggcggagctcttgtcccatac 401 |||||||| || |||||||| ||||| || || ||||| || ||| || | || |||||| Sbjct: 694 cctcagtatccattgtactcagcttcaattgcccttcacggtggaactttggttccatac 753 Query: 402 tatctcaatgaatcgacgggctggggtttggaaacctctgatgttaagaagcaacttgaa 461 || || ||||| | | || |||||| | |||| ||||| | ||||| ||||||||| Sbjct: 754 taccttgatgaagcatcaggatggggtcttgaaatatctgagctgaagaaacaacttgaa 813 Query: 462 gatgctcggtcaagaggcatca 483 |||||| |||||| ||||||| Sbjct: 814 gatgctaggtcaaagggcatca 835
>dbj|D25239.1|RICSS626D Oryza sativa SS626 mRNA for alanine aminotransferase, partial cds Length = 77 Score = 48.1 bits (24), Expect = 0.032 Identities = 26/27 (96%) Strand = Plus / Plus Query: 556 acatagtgaagttctgcaaaaatgagg 582 ||||||||||||||||||||||| ||| Sbjct: 4 acatagtgaagttctgcaaaaatnagg 30
>emb|AJ538933.1|NTA538933 Nicotiana tabacum cDNA-AFLP-fragment BT21-M1-028 Length = 217 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Minus Query: 486 gttagggctttggtggttatcaatccaggaaatccaactggacaggtacttg 537 |||||||||||||| || ||||||||||| || || ||||| ||||| |||| Sbjct: 169 gttagggctttggttgtgatcaatccaggcaaccctactgggcaggttcttg 118
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 498 gtggttatcaatccaggaaatccaactggacaggta 533 ||||| || ||||||||||||||||| ||||||||| Sbjct: 100715 gtggtcataaatccaggaaatccaacaggacaggta 100680 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 137 gatacctggaagagcaacaggagcatacagccatagccagg 177 |||||| || ||||| ||||||||||| |||||||| |||| Sbjct: 101562 gataccaggtagagcgacaggagcatatagccatagtcagg 101522
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 498 gtggttatcaatccaggaaatccaactggacaggta 533 ||||| || ||||||||||||||||| ||||||||| Sbjct: 89750 gtggtcataaatccaggaaatccaacaggacaggta 89715 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 137 gatacctggaagagcaacaggagcatacagccatagccagg 177 |||||| || ||||| ||||||||||| |||||||| |||| Sbjct: 90600 gataccaggtagagcgacaggagcatatagccatagtcagg 90560
>dbj|AK060481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-G11, full insert sequence Length = 1217 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 289 tgatgatgcaattactgataaggaatgagaaagatggcattct 331 |||||||||||||| ||||||| |||||| ||||||||||| Sbjct: 4 tgatgatgcaattattgataagatctgagaatgatggcattct 46
>emb|AJ609634.1| Bacteriophage EJ-1 proviral DNA, complete genome Length = 42935 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 443 tgttaagaagcaacttgaagat 464 |||||||||||||||||||||| Sbjct: 19306 tgttaagaagcaacttgaagat 19327
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 acatttttctcacagatggagcaagt 275 |||||||||| ||||||||||||||| Sbjct: 15878912 acatttttctgacagatggagcaagt 15878937
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 acatttttctcacagatggagcaagt 275 |||||||||| ||||||||||||||| Sbjct: 42038 acatttttctgacagatggagcaagt 42063
>dbj|AK107237.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-F01, full insert sequence Length = 1922 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 acatttttctcacagatggagcaagt 275 |||||||||| ||||||||||||||| Sbjct: 530 acatttttctgacagatggagcaagt 555
>gb|AC151333.2| Xenopus tropicalis clone ISB-321J8, complete sequence Length = 87151 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 aagaaaaccaatatgacatag 561 ||||||||||||||||||||| Sbjct: 54830 aagaaaaccaatatgacatag 54850
>gb|AC026479.2|T13M22 Sequence of BAC T13M22 from Arabidopsis thaliana chromosome 1, complete sequence Length = 7604 Score = 42.1 bits (21), Expect = 2.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 447 aagaagcaacttgaagatgctcggtcaagaggcatca 483 ||||| ||||||||||||||| |||||| ||||||| Sbjct: 6048 aagaaacaacttgaagatgctaggtcaaagggcatca 6012
>dbj|AK107029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A10, full insert sequence Length = 1696 Score = 42.1 bits (21), Expect = 2.0 Identities = 72/89 (80%) Strand = Plus / Plus Query: 141 cctggaagagcaacaggagcatacagccatagccagggtattaaaggacttcgtgatgca 200 ||||||| | |||| |||| |||||| || | ||||||||| |||| | ||||||||| Sbjct: 468 cctggaaaaacaactggaggatacagtcactgtcagggtattgaagggttgcgtgatgca 527 Query: 201 attgcttctgggatcgcttcacgagatgg 229 |||||| |||| || ||||| || ||||| Sbjct: 528 attgctgctggaatagcttctcgcgatgg 556
>emb|BX571971.4| Zebrafish DNA sequence from clone DKEY-227K11 in linkage group 18, complete sequence Length = 153139 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 31 agaactaattcatttgtctta 51 ||||||||||||||||||||| Sbjct: 127366 agaactaattcatttgtctta 127346
>ref|NM_204276.1| Gallus gallus breast cancer 2, early onset (BRCA2), mRNA Length = 10310 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tgattctatttctcgagcaaagca 124 ||||||||||||| |||||||||| Sbjct: 636 tgattctatttctggagcaaagca 659
>gb|AC092268.4| Homo sapiens chromosome X clone RP11-185O17 map p11.4, complete sequence Length = 183539 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 aaggaatgagaaagatggca 327 |||||||||||||||||||| Sbjct: 165968 aaggaatgagaaagatggca 165987
>gb|AC107764.11| Mus musculus chromosome 15, clone RP23-179A6, complete sequence Length = 196178 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gaaaaatacctagaactaat 39 |||||||||||||||||||| Sbjct: 80844 gaaaaatacctagaactaat 80825
>gb|AY206503.1| Sparus aurata mitochondrial alanine aminotransferase mRNA, complete cds Length = 2349 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 cctcagtaccccttgtactcggct 365 |||||||| ||||||||||||||| Sbjct: 831 cctcagtatcccttgtactcggct 854
>emb|CR847808.6| Zebrafish DNA sequence from clone CH211-151I8 in linkage group 22, complete sequence Length = 147994 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 30 tagaactaattcatttgtcttagcgtga 57 |||||||||| |||||||||||| |||| Sbjct: 130451 tagaactaatccatttgtcttagagtga 130478
>ref|XM_645230.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (227.t00005) partial mRNA Length = 801 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 tatcaatccaggaaatccaa 522 |||||||||||||||||||| Sbjct: 660 tatcaatccaggaaatccaa 679
>gb|AY438979.1| Homo sapiens transforming growth factor, beta 2 (TGFB2) gene, complete cds Length = 98039 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ctggggtttggaaacctctg 441 |||||||||||||||||||| Sbjct: 73301 ctggggtttggaaacctctg 73320
>gb|AC073048.7| Homo sapiens BAC clone RP11-54E21 from 7, complete sequence Length = 166183 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 tgcaattactgataaggaatgaga 318 ||||| |||||||||||||||||| Sbjct: 59093 tgcaagtactgataaggaatgaga 59116
>emb|AL590702.17| Human DNA sequence from clone RP13-371D18 on chromosome 6 Contains the 5' end of a novel gene (CD001, BM-021, FLJ11240), a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene, a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene and a CpG island, complete sequence Length = 113587 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ttcttgccatgatacctgga 146 |||||||||||||||||||| Sbjct: 84174 ttcttgccatgatacctgga 84155
>emb|AL450467.8| Human DNA sequence from clone RP11-320E16 on chromosome 9 Contains the 5' end of a novel gene (FLJ35024), the VLDLR gene for very low density lipoprotein receptor and a CpG island, complete sequence Length = 74961 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ctggggtttggaaacctctg 441 |||||||||||||||||||| Sbjct: 73289 ctggggtttggaaacctctg 73308
>emb|AL391259.15| Human DNA sequence from clone RP11-469E19 on chromosome Xp11.4-21.2 Contains a chloride intracellular channel 4 (CLIC4) pseudogene the 5' end of the USP9X gene for X chromosome ubiquitin specific protease 9 (Drosophila fat facets related) and a CpG island, complete sequence Length = 163520 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 aaggaatgagaaagatggca 327 |||||||||||||||||||| Sbjct: 11603 aaggaatgagaaagatggca 11622
>emb|AL359390.14| Human DNA sequence from clone RP11-139E24 on chromosome 1, complete sequence Length = 83750 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cagtgctgattctatttctc 114 |||||||||||||||||||| Sbjct: 68243 cagtgctgattctatttctc 68224
>emb|AL354723.17| Human DNA sequence from clone RP11-526D20 on chromosome 9 Contains the gene for voltage-gated potassium channel (Kv11.1), the 3' end of gene KIAA0020 and a CpG island, complete sequence Length = 159933 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ctggggtttggaaacctctg 441 |||||||||||||||||||| Sbjct: 328 ctggggtttggaaacctctg 347
>emb|AL034406.1|HS571B2 Human DNA sequence from clone RP4-571B2 on chromosome Xq21.1-21.33 Contains part of the DACH2 gene for dachsund homolog 2 (Drosophila), complete sequence Length = 146111 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ttctgattgattatgaaaaa 25 |||||||||||||||||||| Sbjct: 53887 ttctgattgattatgaaaaa 53868
>gb|AY083934.1| Gallus gallus breast cancer susceptibility protein (BRCA2) mRNA, complete cds Length = 10197 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tgattctatttctcgagcaaagca 124 ||||||||||||| |||||||||| Sbjct: 636 tgattctatttctggagcaaagca 659
>gb|AF373870.1| Wolbachia endosymbiont of Brugia malayi clone 03K15 sequence Length = 63116 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 tgcacctgatgatgcaattactga 306 ||||||||||| |||||||||||| Sbjct: 4642 tgcacctgatgttgcaattactga 4619
>gb|AC096638.2| Homo sapiens chromosome 1 clone RP11-224O19, complete sequence Length = 185784 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ctggggtttggaaacctctg 441 |||||||||||||||||||| Sbjct: 125259 ctggggtttggaaacctctg 125278
>gb|AC021019.5|AC021019 Homo sapiens BAC clone RP11-496J3 from 6, complete sequence Length = 220216 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ttcttgccatgatacctgga 146 |||||||||||||||||||| Sbjct: 206042 ttcttgccatgatacctgga 206023
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 533 acttgctgaagaaaaccaatatga 556 ||||||| |||||||||||||||| Sbjct: 26198582 acttgcttaagaaaaccaatatga 26198559
>gb|AC093912.2| Homo sapiens BAC clone RP11-766E1 from 2, complete sequence Length = 194167 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 ttaagaagcaacttgaagat 464 |||||||||||||||||||| Sbjct: 20124 ttaagaagcaacttgaagat 20105
>gb|AC073091.5| Homo sapiens BAC clone RP11-335E8 from 2, complete sequence Length = 185174 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 ctggggtttggaaacctctg 441 |||||||||||||||||||| Sbjct: 6120 ctggggtttggaaacctctg 6101
>gb|AC154220.1| Mus musculus BAC clone RP24-364C6 from chromosome 13, complete sequence Length = 175727 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 attatgaaaaatacctagaa 34 |||||||||||||||||||| Sbjct: 106427 attatgaaaaatacctagaa 106408
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 533 acttgctgaagaaaaccaatatga 556 ||||||| |||||||||||||||| Sbjct: 95409 acttgcttaagaaaaccaatatga 95386
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 533 acttgctgaagaaaaccaatatga 556 ||||||| |||||||||||||||| Sbjct: 21423 acttgcttaagaaaaccaatatga 21400
>gb|AC144690.3| Didelphis virginiana clone LB3-234D12, complete sequence Length = 164830 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctgattgattatgaaaaata 27 |||||||||||||||||||| Sbjct: 111110 ctgattgattatgaaaaata 111129
>emb|BX321898.29| Zebrafish DNA sequence from clone DKEYP-34C12 in linkage group 22, complete sequence Length = 195042 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 30 tagaactaattcatttgtcttagcgtga 57 |||||||||| |||||||||||| |||| Sbjct: 67022 tagaactaatccatttgtcttagagtga 66995
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome Length = 1080084 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 283 tgcacctgatgatgcaattactga 306 ||||||||||| |||||||||||| Sbjct: 497939 tgcacctgatgttgcaattactga 497962
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 283 tgcacctgatgatgcaattactga 306 ||||||||||| |||||||||||| Sbjct: 1243097 tgcacctgatgttgcaattactga 1243074
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ctgattgattatgaaaaata 27 |||||||||||||||||||| Sbjct: 523559 ctgattgattatgaaaaata 523578
>dbj|AB066374.1| Gallus gallus brca2 mRNA for tumor suppressor BRCA2, complete cds Length = 10310 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 tgattctatttctcgagcaaagca 124 ||||||||||||| |||||||||| Sbjct: 636 tgattctatttctggagcaaagca 659 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,329,750 Number of Sequences: 3902068 Number of extensions: 5329750 Number of successful extensions: 119822 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 119401 Number of HSP's gapped (non-prelim): 394 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
