ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd3a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469419.1| Oryza sativa (japonica cultivar-group), mRNA 266 6e-68
2dbj|AK099563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 6e-68
3dbj|AK061982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 6e-68
4dbj|AK061528.1| Oryza sativa (japonica cultivar-group) cDNA clon... 266 6e-68
5gb|AY108507.1| Zea mays PCO092437 mRNA sequence 228 1e-56
6emb|X82617.1|ZMSSIP Z.mays mRNA for sugar-starvation induced pro... 176 4e-41
7gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete seq... 125 1e-25
8gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 121 2e-24
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 2e-24
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
11gb|AF421538.2| Crypthecodinium cohnii BiP (BiP) mRNA, partial cds 46 0.11
12gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 44 0.42
13ref|XM_450329.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.42
14gb|CP000088.1| Thermobifida fusca YX, complete genome 44 0.42
15dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
17gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 44 0.42
18dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
19dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
20dbj|AK106263.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
21dbj|AK101561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
22ref|XM_469388.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
23ref|XM_959815.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.7
24ref|XM_331482.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.7
25ref|XM_847960.1| PREDICTED: Canis familiaris hypothetical protei... 42 1.7
26gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.7
27dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.7
28gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 42 1.7
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.7
30dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.7
31dbj|AB055927.1| Procambarus clarkii mRNA for projectin, complete... 42 1.7
32gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.7
33emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 1.7
34gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.7
35gb|L32859.1|ONHHMG1X Rainbow trout HMG-1 gene exons 2-5, complet... 42 1.7
36ref|XM_549810.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
37gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, compl... 40 6.6
38ref|XM_479452.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
39gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.6
40gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.6
41gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.6
42ref|XM_001002302.1| PREDICTED: Mus musculus similar to Orphan so... 40 6.6
43ref|XM_355900.4| PREDICTED: Mus musculus solute carrier family 6... 40 6.6
44ref|XM_914689.2| PREDICTED: Mus musculus solute carrier family 6... 40 6.6
45ref|XM_800646.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.6
46gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.6
47emb|X02666.1|SGHMGT3 Trout mRNA for high mobility group protein ... 40 6.6
48emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.6
49emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 6.6
50emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 6.6
51emb|AJ002531.1|BJAJ2531 Bradyrhizobium japonicum nosRZDFYLX gene... 40 6.6
52emb|AJ585192.1| Streptomyces resistomycificus remA-R gene cluster 40 6.6
53gb|AC010664.7| Drosophila melanogaster 3L BAC RP98-2G4 (Roswell ... 40 6.6
54gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.6
55gb|AC112727.4| Drosophila melanogaster 3L BAC RP98-15L14 (Roswel... 40 6.6
56ref|NM_137261.1| Drosophila melanogaster CG15709-RA (CG15709), mRNA 40 6.6
57gb|AF255693.1|AF255693 Cassidinidea sp. 18S ribosomal RNA gene, ... 40 6.6
58gb|AC104612.1| Drosophila melanogaster, chromosome 2R, region 52... 40 6.6
59gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 6.6
60gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.6
61gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.6
62gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.6
63gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 40 6.6
64dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
65dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
66gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, r... 40 6.6
67gb|AC007572.5|AC007572 Drosophila melanogaster, chromosome 2R, r... 40 6.6
68gb|AF497482.1| Micromonospora echinospora calicheamicin biosynth... 40 6.6
69dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
70dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
71dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
72dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
73gb|AE005000.1| Halobacterium sp. NRC-1 section 31 of 170 of the ... 40 6.6
74dbj|AK122118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
75dbj|AK111180.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
76dbj|AK099952.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
77emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right termin... 40 6.6
78ref|NM_208688.1| Eremothecium gossypii ACL069Cp (ACL069C), mRNA 40 6.6
79emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left termina... 40 6.6
80gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43... 40 6.6
81gb|AE003483.4| Drosophila melanogaster chromosome 3L, section 17... 40 6.6
82gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, comp... 40 6.6
83gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.6
84gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.6
85emb|BX295541.1|HS172N19 Homo sapiens chromosome X PAC RP1-172N19... 40 6.6
86gb|AC004318.1|AC004318 Drosophila melanogaster DNA sequence (P1 ... 40 6.6
87gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complet... 40 6.6
88dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynt... 40 6.6
89gb|U75434.1|SAU75434 Streptomyces actuosus 23S rRNA methyltransf... 40 6.6
90emb|AL353999.3|HS73J07 Homo sapiens chromosome X sequence from B... 40 6.6
91dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
92dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6

>ref|XM_469419.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1219

 Score =  266 bits (134), Expect = 6e-68
 Identities = 230/262 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgtg 62
           ||||||||||||||||| |||||| | ||||||||||| || ||||||||||||||||||
Sbjct: 286 ctcgccggcctcatcgctctcggctatgacgtgcacccggatgagtaccacagctacgtg 345

                                                                       
Query: 63  cacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgcgctccag 122
           |||||||||||||||||||||  |||||||||||||||||||||||||| |   || | |
Sbjct: 346 cacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcgg 405

                                                                       
Query: 123 agcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggtcg 182
           ||||| || |||||||| || ||||||||||||||||| |||||||||||||||| | ||
Sbjct: 406 agcatcccgcagcgcaaaattctgttcaccaactctgatcgcgcgcacatgaggaaggcg 465

                                                                       
Query: 183 ctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagaccatg 242
           ||| |||||||| || ||||||||| |  |||||||| |||||| |||||||||||||||
Sbjct: 466 ctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatg 525

                                 
Query: 243 aacccgaatctcttcggcgagg 264
           |||||  | |||||||| ||||
Sbjct: 526 aaccctcacctcttcggtgagg 547



 Score =  145 bits (73), Expect = 2e-31
 Identities = 121/137 (88%)
 Strand = Plus / Plus

                                                                       
Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398
           |||||| |||||||||| || ||||  || ||||||||||||||||||| ||||||||||
Sbjct: 619 ctgcgcatcgccggcaccaatccacaccggacgctcttcctcgacgacagcgagaggaac 678

                                                                       
Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458
           |||||  | |||||||||||  |||||||||| | ||||||||||||||||| |||||||
Sbjct: 679 atcgccgcaggaaaagctcttagcctccgcaccgtcctggttggcaagagggtgaggagc 738

                            
Query: 459 aaggaggcggactacgc 475
           |||||||| ||||||||
Sbjct: 739 aaggaggccgactacgc 755



to top

>dbj|AK099563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034L20, full
           insert sequence
          Length = 1147

 Score =  266 bits (134), Expect = 6e-68
 Identities = 230/262 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgtg 62
           ||||||||||||||||| |||||| | ||||||||||| || ||||||||||||||||||
Sbjct: 285 ctcgccggcctcatcgctctcggctatgacgtgcacccggatgagtaccacagctacgtg 344

                                                                       
Query: 63  cacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgcgctccag 122
           |||||||||||||||||||||  |||||||||||||||||||||||||| |   || | |
Sbjct: 345 cacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcgg 404

                                                                       
Query: 123 agcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggtcg 182
           ||||| || |||||||| || ||||||||||||||||| |||||||||||||||| | ||
Sbjct: 405 agcatcccgcagcgcaaaattctgttcaccaactctgatcgcgcgcacatgaggaaggcg 464

                                                                       
Query: 183 ctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagaccatg 242
           ||| |||||||| || ||||||||| |  |||||||| |||||| |||||||||||||||
Sbjct: 465 ctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatg 524

                                 
Query: 243 aacccgaatctcttcggcgagg 264
           |||||  | |||||||| ||||
Sbjct: 525 aaccctcacctcttcggtgagg 546



 Score =  145 bits (73), Expect = 2e-31
 Identities = 121/137 (88%)
 Strand = Plus / Plus

                                                                       
Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398
           |||||| |||||||||| || ||||  || ||||||||||||||||||| ||||||||||
Sbjct: 618 ctgcgcatcgccggcaccaatccacaccggacgctcttcctcgacgacagcgagaggaac 677

                                                                       
Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458
           |||||  | |||||||||||  |||||||||| | ||||||||||||||||| |||||||
Sbjct: 678 atcgccgcaggaaaagctcttagcctccgcaccgtcctggttggcaagagggtgaggagc 737

                            
Query: 459 aaggaggcggactacgc 475
           |||||||| ||||||||
Sbjct: 738 aaggaggccgactacgc 754



to top

>dbj|AK061982.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A11, full
           insert sequence
          Length = 1144

 Score =  266 bits (134), Expect = 6e-68
 Identities = 230/262 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgtg 62
           ||||||||||||||||| |||||| | ||||||||||| || ||||||||||||||||||
Sbjct: 286 ctcgccggcctcatcgctctcggctatgacgtgcacccggatgagtaccacagctacgtg 345

                                                                       
Query: 63  cacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgcgctccag 122
           |||||||||||||||||||||  |||||||||||||||||||||||||| |   || | |
Sbjct: 346 cacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcgg 405

                                                                       
Query: 123 agcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggtcg 182
           ||||| || |||||||| || ||||||||||||||||| |||||||||||||||| | ||
Sbjct: 406 agcatcccgcagcgcaaaattctgttcaccaactctgatcgcgcgcacatgaggaaggcg 465

                                                                       
Query: 183 ctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagaccatg 242
           ||| |||||||| || ||||||||| |  |||||||| |||||| |||||||||||||||
Sbjct: 466 ctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatg 525

                                 
Query: 243 aacccgaatctcttcggcgagg 264
           |||||  | |||||||| ||||
Sbjct: 526 aaccctcacctcttcggtgagg 547



 Score =  137 bits (69), Expect = 4e-29
 Identities = 120/137 (87%)
 Strand = Plus / Plus

                                                                       
Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398
           |||||| |||||||||| || ||||  || ||||||||||||||||||  ||||||||||
Sbjct: 619 ctgcgcatcgccggcaccaatccacaccggacgctcttcctcgacgacggcgagaggaac 678

                                                                       
Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458
           |||||  | |||||||||||  |||||||||| | ||||||||||||||||| |||||||
Sbjct: 679 atcgccgcaggaaaagctcttagcctccgcaccgtcctggttggcaagagggtgaggagc 738

                            
Query: 459 aaggaggcggactacgc 475
           |||||||| ||||||||
Sbjct: 739 aaggaggccgactacgc 755



to top

>dbj|AK061528.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D11, full
           insert sequence
          Length = 1112

 Score =  266 bits (134), Expect = 6e-68
 Identities = 230/262 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgtg 62
           ||||||||||||||||| |||||| | ||||||||||| || ||||||||||||||||||
Sbjct: 269 ctcgccggcctcatcgctctcggctatgacgtgcacccggatgagtaccacagctacgtg 328

                                                                       
Query: 63  cacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgcgctccag 122
           |||||||||||||||||||||  |||||||||||||||||||||||||| |   || | |
Sbjct: 329 cacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcgg 388

                                                                       
Query: 123 agcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggtcg 182
           ||||| || |||||||| || ||||||||||||||||| |||||||||||||||| | ||
Sbjct: 389 agcatcccgcagcgcaaaattctgttcaccaactctgatcgcgcgcacatgaggaaggcg 448

                                                                       
Query: 183 ctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagaccatg 242
           ||| |||||||| || ||||||||| |  |||||||| |||||| |||||||||||||||
Sbjct: 449 ctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatg 508

                                 
Query: 243 aacccgaatctcttcggcgagg 264
           |||||  | |||||||| ||||
Sbjct: 509 aaccctcacctcttcggtgagg 530



 Score =  145 bits (73), Expect = 2e-31
 Identities = 121/137 (88%)
 Strand = Plus / Plus

                                                                       
Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398
           |||||| |||||||||| || ||||  || ||||||||||||||||||| ||||||||||
Sbjct: 602 ctgcgcatcgccggcaccaatccacaccggacgctcttcctcgacgacagcgagaggaac 661

                                                                       
Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458
           |||||  | |||||||||||  |||||||||| | ||||||||||||||||| |||||||
Sbjct: 662 atcgccgcaggaaaagctcttagcctccgcaccgtcctggttggcaagagggtgaggagc 721

                            
Query: 459 aaggaggcggactacgc 475
           |||||||| ||||||||
Sbjct: 722 aaggaggccgactacgc 738



to top

>gb|AY108507.1| Zea mays PCO092437 mRNA sequence
          Length = 1277

 Score =  228 bits (115), Expect = 1e-56
 Identities = 231/267 (86%), Gaps = 2/267 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   cctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgt 61
           ||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 305 cctcgccgggctcatcgcgctcggctacgacgtgcacccggacgagtaccacagctacgt 364

                                                                       
Query: 62  gcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgc-gctcc 120
           |||||| ||||| || ||||||  ||||||   |||||||||||| || || || ||| |
Sbjct: 365 gcacggcaggctaccgtacgacaggatcgcgcgcgacccgcagctggc-gcggctgctgc 423

                                                                       
Query: 121 agagcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggt 180
           ||||||| || ||||||||  | |||||||||||||| |||||||||||||||  | || 
Sbjct: 424 agagcatcccgcagcgcaaagtgctgttcaccaactcggaccgcgcgcacatggagcggg 483

                                                                       
Query: 181 cgctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagacca 240
           ||||||||||||||||| | |||||||||  |||||||| |||||| |||||||||||||
Sbjct: 484 cgctggagcggctgggcgtggacgaggccgccttcgacgccgtcgtgtgcttcgagacca 543

                                      
Query: 241 tgaacccgaatctcttcggcgaggacg 267
           |||||||| | || |||||||| ||||
Sbjct: 544 tgaacccgcacctgttcggcgacgacg 570



 Score =  161 bits (81), Expect = 3e-36
 Identities = 129/145 (88%)
 Strand = Plus / Plus

                                                                       
Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398
           ||||||| ||| ||| | |||||||| || ||||| ||||| ||||||| ||||||||||
Sbjct: 630 ctgcgcgccgctggctccaacccacgccggacgctgttcctggacgacagcgagaggaac 689

                                                                       
Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458
           |||||  |||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 690 atcgccgcggggaaagcgctcggcctccgcaccgccctggttggcaagagggcgaggagc 749

                                    
Query: 459 aaggaggcggactacgcgctggaga 483
           ||||| |||||||||||| ||||||
Sbjct: 750 aaggaagcggactacgcggtggaga 774



to top

>emb|X82617.1|ZMSSIP Z.mays mRNA for sugar-starvation induced protein
          Length = 1022

 Score =  176 bits (89), Expect = 4e-41
 Identities = 180/209 (86%), Gaps = 1/209 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   cctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgt 61
           ||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 64  cctcgccgggctcatcgcgctcggctacgacgtgcacccggacgagtaccacagctacgt 123

                                                                       
Query: 62  gcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgc-cgcgctcc 120
           |||||| ||||| || ||||||  ||||||   |||||||||||| | ||| |  ||| |
Sbjct: 124 gcacggcaggctaccgtacgacaggatcgcgcgcgacccgcagctgggcgcgcctgctgc 183

                                                                       
Query: 121 agagcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggt 180
           ||||||| || ||||||||  | |||||||||||||| |||||||||||||||  | || 
Sbjct: 184 agagcatcccgcagcgcaaagtgctgttcaccaactcggaccgcgcgcacatggagcggg 243

                                        
Query: 181 cgctggagcggctgggcctcgacgaggcc 209
           ||||||||||||||||| | |||||||||
Sbjct: 244 cgctggagcggctgggcgtggacgaggcc 272



 Score =  157 bits (79), Expect = 4e-35
 Identities = 121/135 (89%)
 Strand = Plus / Plus

                                                                       
Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398
           ||||||| ||||||| | |||||||| || ||||| ||||| ||||||| ||||||||||
Sbjct: 391 ctgcgcgccgccggctccaacccacgccggacgctgttcctggacgacagcgagaggaac 450

                                                                       
Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458
           |||||  |||| ||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 451 atcgccgcggggaaagcgctcggcctccgcaccgccctggttggcaagagggcgaggagc 510

                          
Query: 459 aaggaggcggactac 473
           ||||| |||||||||
Sbjct: 511 aaggaagcggactac 525



to top

>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence
          Length = 127914

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                         
Query: 147   ttcaccaactctgaccgcgcgcacatgaggaggtcgctggagcggctgggcctcgacgag 206
             ||||||||||| ||||| |||||||||| | || || |||||||||||||| | ||||||
Sbjct: 10172 ttcaccaactcggaccgggcgcacatgaagcgggcgttggagcggctgggcgtggacgag 10231

                                                                    
Query: 207   gccctcttcgacggcgtcgtatgcttcgagaccatgaacccgaatctcttcggcg 261
             ||| ||||||||| |||||| ||||||||||||||||||||| | ||||||||||
Sbjct: 10232 gccgtcttcgacgccgtcgtgtgcttcgagaccatgaacccgcacctcttcggcg 10286



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 437   ggttggcaagagggcgaggagcaaggaggcggactacgcgctggaga 483
             |||||||||||||| |||||||||||| || ||||||||||||||||
Sbjct: 12191 ggttggcaagagggtgaggagcaaggacgcagactacgcgctggaga 12237



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Plus

                                                                   
Query: 53    cagctacgtgcacgggaggctgccctacgacgtgatcgccgccgacccgcagct 106
             ||||||||||||||| ||||| || |||||| ||||| ||||||||||||||||
Sbjct: 9960  cagctacgtgcacggcaggctaccgtacgacatgatccccgccgacccgcagct 10013



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                         
Query: 371   gctcttcctcgacgacaacgagaggaacatcgcgtcgggaaaagctctcggcctccgcac 430
             ||||||||| ||||||| ||||||||||||| |  | || ||||| ||||||||||||||
Sbjct: 10972 gctcttcctggacgacagcgagaggaacatcaccgctgggaaagcgctcggcctccgcac 11031

                      
Query: 431   agccctggt 439
              ||||||||
Sbjct: 11032 cgccctggt 11040



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 18   gcgctcggccacgacgtgcaccccgacgagtaccacag 55
            ||||||||| | ||||||||||| ||||||||||||||
Sbjct: 9809 gcgctcggctatgacgtgcacccggacgagtaccacag 9846



to top

>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                         
Query: 144   ctgttcaccaactctgaccgcgcgcacatgaggaggtcgctggagcggctgggcctcgac 203
             ||||||||||||||||| |||||||||||||||| | ||||| |||||||| || |||||
Sbjct: 96769 ctgttcaccaactctgatcgcgcgcacatgaggaaggcgctgcagcggctgagcgtcgac 96828

                                                                         
Query: 204   gaggccctcttcgacggcgtcgtatgcttcgagaccatgaacccgaatctcttcggcgag 263
             |||| |  |||||||| |||||| ||||||||||||||||||||  | |||||||| |||
Sbjct: 96829 gagggctgcttcgacgccgtcgtgtgcttcgagaccatgaaccctcacctcttcggtgag 96888

              
Query: 264   g 264
             |
Sbjct: 96889 g 96889



 Score =  101 bits (51), Expect = 2e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                        
Query: 53    cagctacgtgcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccg 111
             |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 96589 cagctacgtgcacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccg 96647



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 371   gctcttcctcgacgacaacgagaggaacatcgcgtcgggaaaagctctcggcctccgcac 430
             ||||||||||||||||| |||||||||||||||  | |||||||||||  ||||||||||
Sbjct: 97515 gctcttcctcgacgacagcgagaggaacatcgccgcaggaaaagctcttagcctccgcac 97574

                      
Query: 431   agccctggt 439
              | ||||||
Sbjct: 97575 cgtcctggt 97583



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 437   ggttggcaagagggcgaggagcaaggaggcggactacgc 475
             |||||||||||||| ||||||||||||||| ||||||||
Sbjct: 98594 ggttggcaagagggtgaggagcaaggaggccgactacgc 98632



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                            
Query: 144      ctgttcaccaactctgaccgcgcgcacatgaggaggtcgctggagcggctgggcctcgac 203
                ||||||||||||||||| |||||||||||||||| | ||||| |||||||| || |||||
Sbjct: 27852639 ctgttcaccaactctgatcgcgcgcacatgaggaaggcgctgcagcggctgagcgtcgac 27852698

                                                                            
Query: 204      gaggccctcttcgacggcgtcgtatgcttcgagaccatgaacccgaatctcttcggcgag 263
                |||| |  |||||||| |||||| ||||||||||||||||||||  | |||||||| |||
Sbjct: 27852699 gagggctgcttcgacgccgtcgtgtgcttcgagaccatgaaccctcacctcttcggtgag 27852758

                 
Query: 264      g 264
                |
Sbjct: 27852759 g 27852759



 Score =  101 bits (51), Expect = 2e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                           
Query: 53       cagctacgtgcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccg 111
                |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 27852459 cagctacgtgcacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccg 27852517



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                            
Query: 371      gctcttcctcgacgacaacgagaggaacatcgcgtcgggaaaagctctcggcctccgcac 430
                ||||||||||||||||| |||||||||||||||  | |||||||||||  ||||||||||
Sbjct: 27853385 gctcttcctcgacgacagcgagaggaacatcgccgcaggaaaagctcttagcctccgcac 27853444

                         
Query: 431      agccctggt 439
                 | ||||||
Sbjct: 27853445 cgtcctggt 27853453



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 437      ggttggcaagagggcgaggagcaaggaggcggactacgc 475
                |||||||||||||| ||||||||||||||| ||||||||
Sbjct: 27854464 ggttggcaagagggtgaggagcaaggaggccgactacgc 27854502



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 273      gacgacgacgacgtcgaccgc 293
                |||||||||||||||||||||
Sbjct: 27696195 gacgacgacgacgtcgaccgc 27696215



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                            
Query: 144      ctgttcaccaactctgaccgcgcgcacatgaggaggtcgctggagcggctgggcctcgac 203
                ||||||||||||||||| |||||||||||||||| | ||||| |||||||| || |||||
Sbjct: 27943963 ctgttcaccaactctgatcgcgcgcacatgaggaaggcgctgcagcggctgagcgtcgac 27944022

                                                                            
Query: 204      gaggccctcttcgacggcgtcgtatgcttcgagaccatgaacccgaatctcttcggcgag 263
                |||| |  |||||||| |||||| ||||||||||||||||||||  | |||||||| |||
Sbjct: 27944023 gagggctgcttcgacgccgtcgtgtgcttcgagaccatgaaccctcacctcttcggtgag 27944082

                 
Query: 264      g 264
                |
Sbjct: 27944083 g 27944083



 Score =  101 bits (51), Expect = 2e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                           
Query: 53       cagctacgtgcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccg 111
                |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 27943783 cagctacgtgcacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccg 27943841



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                            
Query: 371      gctcttcctcgacgacaacgagaggaacatcgcgtcgggaaaagctctcggcctccgcac 430
                ||||||||||||||||| |||||||||||||||  | |||||||||||  ||||||||||
Sbjct: 27944709 gctcttcctcgacgacagcgagaggaacatcgccgcaggaaaagctcttagcctccgcac 27944768

                         
Query: 431      agccctggt 439
                 | ||||||
Sbjct: 27944769 cgtcctggt 27944777



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 437      ggttggcaagagggcgaggagcaaggaggcggactacgc 475
                |||||||||||||| ||||||||||||||| ||||||||
Sbjct: 27945788 ggttggcaagagggtgaggagcaaggaggccgactacgc 27945826



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 273      gacgacgacgacgtcgaccgc 293
                |||||||||||||||||||||
Sbjct: 27787518 gacgacgacgacgtcgaccgc 27787538



to top

>gb|AF421538.2| Crypthecodinium cohnii BiP (BiP) mRNA, partial cds
          Length = 2238

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 203  cgaggccctcttcgacggcgtcg 225
            |||||||||||||||||||||||
Sbjct: 987  cgaggccctcttcgacggcgtcg 1009



to top

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 80      cgacgtgatcgccgccgacccgcagctcgccgcc 113
               ||||||||||||| ||||||||||| || |||||
Sbjct: 1049004 cgacgtgatcgcccccgacccgcaggtcaccgcc 1049037



to top

>ref|XM_450329.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1835

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 99   ccgcagctcgccgccgcgctcc 120
            ||||||||||||||||||||||
Sbjct: 1175 ccgcagctcgccgccgcgctcc 1154



to top

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 88      tcgccgccgacccgcagctcgc 109
               ||||||||||||||||||||||
Sbjct: 1712464 tcgccgccgacccgcagctcgc 1712485



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 99      ccgcagctcgccgccgcgctcc 120
               ||||||||||||||||||||||
Sbjct: 4174909 ccgcagctcgccgccgcgctcc 4174888



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 269     caaggacgacgacgacgtcgaccgcc 294
               ||||||||||||||||| ||||||||
Sbjct: 8881547 caaggacgacgacgacgacgaccgcc 8881522



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 271     aggacgacgacgacgtcgaccgcc 294
               ||||||||||||||| ||||||||
Sbjct: 9565672 aggacgacgacgacgacgaccgcc 9565695



to top

>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 96     gacccgcagctcgccgccgcgctccagagc 125
              |||||||||||| ||| |||||||||||||
Sbjct: 453633 gacccgcagctcaccgtcgcgctccagagc 453604



to top

>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0066C12
          Length = 168874

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 99     ccgcagctcgccgccgcgctcc 120
              ||||||||||||||||||||||
Sbjct: 158390 ccgcagctcgccgccgcgctcc 158369



to top

>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0613F08
          Length = 142937

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 269   caaggacgacgacgacgtcgaccgcc 294
             ||||||||||||||||| ||||||||
Sbjct: 86565 caaggacgacgacgacgacgaccgcc 86540



to top

>dbj|AK106263.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F09, full
           insert sequence
          Length = 2025

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 99  ccgcagctcgccgccgcgctcc 120
           ||||||||||||||||||||||
Sbjct: 357 ccgcagctcgccgccgcgctcc 378



to top

>dbj|AK101561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050D17, full
            insert sequence
          Length = 1833

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 99   ccgcagctcgccgccgcgctcc 120
            ||||||||||||||||||||||
Sbjct: 1173 ccgcagctcgccgccgcgctcc 1152



to top

>ref|XM_469388.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1431

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 273 gacgacgacgacgtcgaccgc 293
           |||||||||||||||||||||
Sbjct: 118 gacgacgacgacgtcgaccgc 138



to top

>ref|XM_959815.1| Neurospora crassa OR74A hypothetical protein (NCU09091.1) partial
           mRNA
          Length = 1644

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 373 tcttcctcgacgacaacgaga 393
           |||||||||||||||||||||
Sbjct: 178 tcttcctcgacgacaacgaga 198



to top

>ref|XM_331482.1| Neurospora crassa OR74A hypothetical protein (NCU09091.1) partial
           mRNA
          Length = 1644

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 373 tcttcctcgacgacaacgaga 393
           |||||||||||||||||||||
Sbjct: 178 tcttcctcgacgacaacgaga 198



to top

>ref|XM_847960.1| PREDICTED: Canis familiaris hypothetical protein LOC610450
           (LOC610450), mRNA
          Length = 792

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 172 tgaggaggtcgctggagcggctggg 196
           |||||||||||||||||||| ||||
Sbjct: 620 tgaggaggtcgctggagcggatggg 644



to top

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 323     cgccttcgccaccgccctgcgcgtcgccg 351
               |||| |||||||||||||||||| |||||
Sbjct: 2649801 cgccgtcgccaccgccctgcgcgccgccg 2649773



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 86      gatcgccgccgacccgcagct 106
               |||||||||||||||||||||
Sbjct: 4464931 gatcgccgccgacccgcagct 4464911



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 200     cgacgaggccctcttcgacg 219
               ||||||||||||||||||||
Sbjct: 5355618 cgacgaggccctcttcgacg 5355599



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 103     agctcgccgccgcgctccag 122
               ||||||||||||||||||||
Sbjct: 3300726 agctcgccgccgcgctccag 3300745



to top

>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
              sequence
          Length = 119329

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 273    gacgacgacgacgtcgaccgc 293
              |||||||||||||||||||||
Sbjct: 117699 gacgacgacgacgtcgaccgc 117679



to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 92      cgccgacccgcagctcgccgc 112
               |||||||||||||||||||||
Sbjct: 2642932 cgccgacccgcagctcgccgc 2642912



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 8       cggcctcatcgcgctcggccacgac 32
               |||||||||||||||||||| ||||
Sbjct: 1488396 cggcctcatcgcgctcggcctcgac 1488420



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 323     cgccttcgccaccgccctgcgcgtcgccggcac 355
               ||||||||||| | || ||||||||||||||||
Sbjct: 6796143 cgccttcgccagcaccttgcgcgtcgccggcac 6796175



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 273    gacgacgacgacgtcgaccgcccc 296
              ||||||||||||||||| ||||||
Sbjct: 331280 gacgacgacgacgtcgagcgcccc 331257



to top

>dbj|AB055927.1| Procambarus clarkii mRNA for projectin, complete cds
          Length = 27060

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 412 aagctctcggcctccgcacagccct 436
           ||||||||||||||| |||||||||
Sbjct: 252 aagctctcggcctccccacagccct 276



to top

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 90      gccgccgacccgcagctcgcc 110
               |||||||||||||||||||||
Sbjct: 2744379 gccgccgacccgcagctcgcc 2744399



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 263     ggacgccaaggacgacgacg 282
               ||||||||||||||||||||
Sbjct: 1518308 ggacgccaaggacgacgacg 1518327



to top

>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 2      cctcgccggcctcatcgcgctcggc 26
              |||||||| ||||||||||||||||
Sbjct: 348669 cctcgccgtcctcatcgcgctcggc 348645



to top

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 111     gccgcgctccagagcatgccccagc 135
               ||||||||||||| |||||||||||
Sbjct: 3138366 gccgcgctccagaccatgccccagc 3138390



to top

>gb|L32859.1|ONHHMG1X Rainbow trout HMG-1 gene exons 2-5, complete cds
          Length = 3882

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 266  cgccaaggacgacgacgacgtcgac 290
            |||||||||||||||||||| ||||
Sbjct: 3042 cgccaaggacgacgacgacgacgac 3066



to top

>ref|XM_549810.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3709

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 273 gacgacgacgacgtcgaccgcccc 296
           ||||||||||||| ||||||||||
Sbjct: 289 gacgacgacgacgacgaccgcccc 312



to top

>gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, complete sequence
          Length = 40909

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 266   cgccaaggacgacgacgacgtcga 289
             ||||| ||||||||||||||||||
Sbjct: 21686 cgccatggacgacgacgacgtcga 21663



to top

>ref|XM_479452.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 699

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 92  cgccgacccgcagctcgccgccgc 115
           |||||||| |||||||||||||||
Sbjct: 282 cgccgacctgcagctcgccgccgc 305



to top

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 7       ccggcctcatcgcgctcggc 26
               ||||||||||||||||||||
Sbjct: 3179358 ccggcctcatcgcgctcggc 3179339



to top

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 7       ccggcctcatcgcgctcggc 26
               ||||||||||||||||||||
Sbjct: 1621493 ccggcctcatcgcgctcggc 1621512



to top

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 85     tgatcgccgccgacccgcagctcg 108
              ||||| ||||||||||||||||||
Sbjct: 927171 tgatcaccgccgacccgcagctcg 927194



to top

>ref|XM_001002302.1| PREDICTED: Mus musculus similar to Orphan sodium- and
           chloride-dependent neurotransmitter transporter NTT5
           (Solute carrier family 6 member 16) (LOC672880), mRNA
          Length = 2347

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 141 atcctgttcaccaactctga 160
           ||||||||||||||||||||
Sbjct: 185 atcctgttcaccaactctga 166



to top

>ref|XM_355900.4| PREDICTED: Mus musculus solute carrier family 6, member 16
           (LOC381884), mRNA
          Length = 2392

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 141 atcctgttcaccaactctga 160
           ||||||||||||||||||||
Sbjct: 185 atcctgttcaccaactctga 166



to top

>ref|XM_914689.2| PREDICTED: Mus musculus solute carrier family 6, member 16
           (LOC381884), mRNA
          Length = 2392

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 141 atcctgttcaccaactctga 160
           ||||||||||||||||||||
Sbjct: 185 atcctgttcaccaactctga 166



to top

>ref|XM_800646.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503477.10) partial mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 257 cggcgaggacgccaaggacgacgacgacgtcg 288
           ||||||||||| | | ||||||||||||||||
Sbjct: 50  cggcgaggacgacgacgacgacgacgacgtcg 81



to top

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      acgacgtgatcgccgccgac 98
               ||||||||||||||||||||
Sbjct: 1749166 acgacgtgatcgccgccgac 1749185



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 4       tcgccggcctcatcgcgctcggcc 27
               |||||||||| |||||||||||||
Sbjct: 1135100 tcgccggcctgatcgcgctcggcc 1135077



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 3      ctcgccggcctcatcgcgctcggc 26
              ||||||||||| ||||||||||||
Sbjct: 379922 ctcgccggcctgatcgcgctcggc 379945



to top

>emb|X02666.1|SGHMGT3 Trout mRNA for high mobility group protein HMG-T
          Length = 716

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 cgccaaggacgacgacgacg 285
           ||||||||||||||||||||
Sbjct: 534 cgccaaggacgacgacgacg 553



to top

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 7       ccggcctcatcgcgctcggc 26
               ||||||||||||||||||||
Sbjct: 1508641 ccggcctcatcgcgctcggc 1508660



to top

>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 275    cgacgacgacgtcgaccgcc 294
              ||||||||||||||||||||
Sbjct: 174875 cgacgacgacgtcgaccgcc 174894



to top

>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    cgacgaggccctcttcgacg 219
              ||||||||||||||||||||
Sbjct: 279842 cgacgaggccctcttcgacg 279861



to top

>emb|AJ002531.1|BJAJ2531 Bradyrhizobium japonicum nosRZDFYLX gene cluster for nitrous-oxide
            reduction
          Length = 10022

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 273  gacgacgacgacgtcgaccgcccc 296
            ||||||||||||||||| ||||||
Sbjct: 7310 gacgacgacgacgtcgagcgcccc 7287



to top

>emb|AJ585192.1| Streptomyces resistomycificus remA-R gene cluster
          Length = 16662

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 328   tcgccaccgccctgcgcgtcgccg 351
             |||||||||| |||||||||||||
Sbjct: 14579 tcgccaccgcgctgcgcgtcgccg 14556



to top

>gb|AC010664.7| Drosophila melanogaster 3L BAC RP98-2G4 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 155615

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    aggacgacgacgacgtcgac 290
              ||||||||||||||||||||
Sbjct: 138364 aggacgacgacgacgtcgac 138383



to top

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 266     cgccaaggacgacgacgacg 285
               ||||||||||||||||||||
Sbjct: 4921098 cgccaaggacgacgacgacg 4921079



to top

>gb|AC112727.4| Drosophila melanogaster 3L BAC RP98-15L14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 157739

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    aggacgacgacgacgtcgac 290
              ||||||||||||||||||||
Sbjct: 123894 aggacgacgacgacgtcgac 123913



to top

>ref|NM_137261.1| Drosophila melanogaster CG15709-RA (CG15709), mRNA
          Length = 657

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 aggacgacgacgacgtcgac 290
           ||||||||||||||||||||
Sbjct: 428 aggacgacgacgacgtcgac 447



to top

>gb|AF255693.1|AF255693 Cassidinidea sp. 18S ribosomal RNA gene, complete sequence
          Length = 2743

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 273  gacgacgacgacgtcgaccgcccc 296
            |||||||||||||||| |||||||
Sbjct: 2033 gacgacgacgacgtcgtccgcccc 2010



to top

>gb|AC104612.1| Drosophila melanogaster, chromosome 2R, region 52F-53A, BAC clone
            BACR29I14, complete sequence
          Length = 169877

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 271  aggacgacgacgacgtcgac 290
            ||||||||||||||||||||
Sbjct: 9416 aggacgacgacgacgtcgac 9435



to top

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 211    tcttcgacggcgtcgtatgcttcg 234
              |||||||| |||||||||||||||
Sbjct: 133798 tcttcgaccgcgtcgtatgcttcg 133821



to top

>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 254    cttcggcgaggacgccaaggacgacgac 281
              ||||||||||| |||||||||| |||||
Sbjct: 232892 cttcggcgagggcgccaaggaccacgac 232865



to top

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 323     cgccttcgccaccgccctgc 342
               ||||||||||||||||||||
Sbjct: 2529257 cgccttcgccaccgccctgc 2529238



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      tcgccgccgacccgcagctc 107
               ||||||||||||||||||||
Sbjct: 5097835 tcgccgccgacccgcagctc 5097854



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 4       tcgccggcctcatcgcgctcggcc 27
               |||||||||| |||||||||||||
Sbjct: 1022825 tcgccggcctgatcgcgctcggcc 1022802



to top

>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 92     cgccgacccgcagctcgccgccgcgctc 119
              ||||||||||||| ||||||||| ||||
Sbjct: 136368 cgccgacccgcagatcgccgccgggctc 136341



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 92       cgccgacccgcagctcgccgccgc 115
                |||||||| |||||||||||||||
Sbjct: 28286414 cgccgacctgcagctcgccgccgc 28286437



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 273   gacgacgacgacgtcgaccgcccc 296
             ||||||||||||| ||||||||||
Sbjct: 72110 gacgacgacgacgacgaccgcccc 72133



to top

>gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, region 52E-53A, BAC clone
             BACR25I17, complete sequence
          Length = 157835

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   aggacgacgacgacgtcgac 290
             ||||||||||||||||||||
Sbjct: 15934 aggacgacgacgacgtcgac 15915



to top

>gb|AC007572.5|AC007572 Drosophila melanogaster, chromosome 2R, region 53A-53B, BAC clone
              BACR21B04, complete sequence
          Length = 156823

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    aggacgacgacgacgtcgac 290
              ||||||||||||||||||||
Sbjct: 109352 aggacgacgacgacgtcgac 109333



to top

>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete
            sequence
          Length = 90348

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 279  gacgacgtcgaccgccccgccgtc 302
            |||||||||||||||| |||||||
Sbjct: 9678 gacgacgtcgaccgccgcgccgtc 9655



to top

>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0693E08
          Length = 157969

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 271   aggacgacgacgacgtcgaccgcc 294
             ||||||||||||||| ||||||||
Sbjct: 29890 aggacgacgacgacgacgaccgcc 29913



to top

>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0672D08
          Length = 173729

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 273   gacgacgacgacgtcgaccgcccc 296
             ||||||||||||| ||||||||||
Sbjct: 69912 gacgacgacgacgacgaccgcccc 69935



to top

>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0625E02
          Length = 153921

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     cgccgacccgcagctcgccgccgc 115
              |||||||| |||||||||||||||
Sbjct: 141959 cgccgacctgcagctcgccgccgc 141982



to top

>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0470D12
          Length = 157248

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 92    cgccgacccgcagctcgccgccgc 115
             |||||||| |||||||||||||||
Sbjct: 11977 cgccgacctgcagctcgccgccgc 12000



to top

>gb|AE005000.1| Halobacterium sp. NRC-1 section 31 of 170 of the complete genome
          Length = 11487

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 275 cgacgacgacgtcgaccgcc 294
           ||||||||||||||||||||
Sbjct: 644 cgacgacgacgtcgaccgcc 663



to top

>dbj|AK122118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128C08, full
           insert sequence
          Length = 3706

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 273 gacgacgacgacgtcgaccgcccc 296
           ||||||||||||| ||||||||||
Sbjct: 289 gacgacgacgacgacgaccgcccc 312



to top

>dbj|AK111180.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-F12, full
            insert sequence
          Length = 3298

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 23   cggccacgacgtgcaccccgacga 46
            ||||||||||||||| ||||||||
Sbjct: 1407 cggccacgacgtgcagcccgacga 1430



to top

>dbj|AK099952.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123J12, full
           insert sequence
          Length = 4240

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 273 gacgacgacgacgtcgaccgcccc 296
           ||||||||||||| ||||||||||
Sbjct: 296 gacgacgacgacgacgaccgcccc 319



to top

>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     cgccggcctcatcgcgctcggcca 28
             |||||||||||| |||||||||||
Sbjct: 33587 cgccggcctcatggcgctcggcca 33564



to top

>ref|NM_208688.1| Eremothecium gossypii ACL069Cp (ACL069C), mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 254  cttcggcgaggacgccaaggacgacgac 281
            ||||||||||| |||||||||| |||||
Sbjct: 1482 cttcggcgagggcgccaaggaccacgac 1509



to top

>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     cgccggcctcatcgcgctcggcca 28
             |||||||||||| |||||||||||
Sbjct: 33587 cgccggcctcatggcgctcggcca 33564



to top

>gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43 of 73 of the complete
             sequence
          Length = 258223

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   aggacgacgacgacgtcgac 290
             ||||||||||||||||||||
Sbjct: 51549 aggacgacgacgacgtcgac 51530



to top

>gb|AE003483.4| Drosophila melanogaster chromosome 3L, section 17 of 83 of the complete
              sequence
          Length = 175890

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    aggacgacgacgacgtcgac 290
              ||||||||||||||||||||
Sbjct: 124660 aggacgacgacgacgtcgac 124679



to top

>gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, complete sequence
          Length = 255342

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 182    gctggagcggctgggcctcgacga 205
              ||||||| ||||||||||||||||
Sbjct: 150407 gctggagaggctgggcctcgacga 150430



to top

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 90     gccgccgacccgcagctcgccgccgcgc 117
              ||||||| || |||||||||||||||||
Sbjct: 750874 gccgccgcccagcagctcgccgccgcgc 750901



to top

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 18      gcgctcggccacgacgtgca 37
               ||||||||||||||||||||
Sbjct: 1654206 gcgctcggccacgacgtgca 1654187



to top

>emb|BX295541.1|HS172N19 Homo sapiens chromosome X PAC RP1-172N19 map Xq13 markers PHKA1-DXS227,
              complete sequence
          Length = 176589

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    gacgacgacgacgtcgaccg 292
              ||||||||||||||||||||
Sbjct: 154851 gacgacgacgacgtcgaccg 154870



to top

>gb|AC004318.1|AC004318 Drosophila melanogaster DNA sequence (P1 DS06464 (D212)), complete
             sequence
          Length = 86188

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   aggacgacgacgacgtcgac 290
             ||||||||||||||||||||
Sbjct: 17293 aggacgacgacgacgtcgac 17274



to top

>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence
          Length = 227073

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   atcctgttcaccaactctga 160
             ||||||||||||||||||||
Sbjct: 87112 atcctgttcaccaactctga 87131



to top

>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster,
             partial and complete cds
          Length = 113234

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    tcgccgccgacccgcagctcgccg 111
             ||||||||| ||||||||||||||
Sbjct: 92502 tcgccgccggcccgcagctcgccg 92479



to top

>gb|U75434.1|SAU75434 Streptomyces actuosus 23S rRNA methyltransferase (nshR) and NshA
            (nshA) genes, complete cds
          Length = 3444

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   gatcgccgccgacccgcagc 105
            ||||||||||||||||||||
Sbjct: 2409 gatcgccgccgacccgcagc 2390



to top

>emb|AL353999.3|HS73J07 Homo sapiens chromosome X sequence from BAC CEPHB73J07 region
             PHKA1-DXS227 map Xq13, complete sequence
          Length = 126374

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   gacgacgacgacgtcgaccg 292
             ||||||||||||||||||||
Sbjct: 78199 gacgacgacgacgtcgaccg 78180



to top

>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0455C04
          Length = 147940

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 273   gacgacgacgacgtcgaccgcccc 296
             ||||||||||||| ||||||||||
Sbjct: 20656 gacgacgacgacgacgaccgcccc 20679



to top

>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0402A09
          Length = 141966

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 273   gacgacgacgacgtcgaccgcccc 296
             ||||||||||||| ||||||||||
Sbjct: 57040 gacgacgacgacgacgaccgcccc 57063


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,767,784
Number of Sequences: 3902068
Number of extensions: 2767784
Number of successful extensions: 105876
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100272
Number of HSP's gapped (non-prelim): 5598
length of query: 485
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 463
effective length of database: 17,147,199,772
effective search space: 7939153494436
effective search space used: 7939153494436
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top