ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd3a05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1219 Score = 266 bits (134), Expect = 6e-68 Identities = 230/262 (87%) Strand = Plus / Plus Query: 3 ctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgtg 62 ||||||||||||||||| |||||| | ||||||||||| || |||||||||||||||||| Sbjct: 286 ctcgccggcctcatcgctctcggctatgacgtgcacccggatgagtaccacagctacgtg 345 Query: 63 cacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgcgctccag 122 ||||||||||||||||||||| |||||||||||||||||||||||||| | || | | Sbjct: 346 cacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcgg 405 Query: 123 agcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggtcg 182 ||||| || |||||||| || ||||||||||||||||| |||||||||||||||| | || Sbjct: 406 agcatcccgcagcgcaaaattctgttcaccaactctgatcgcgcgcacatgaggaaggcg 465 Query: 183 ctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagaccatg 242 ||| |||||||| || ||||||||| | |||||||| |||||| ||||||||||||||| Sbjct: 466 ctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatg 525 Query: 243 aacccgaatctcttcggcgagg 264 ||||| | |||||||| |||| Sbjct: 526 aaccctcacctcttcggtgagg 547 Score = 145 bits (73), Expect = 2e-31 Identities = 121/137 (88%) Strand = Plus / Plus Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398 |||||| |||||||||| || |||| || ||||||||||||||||||| |||||||||| Sbjct: 619 ctgcgcatcgccggcaccaatccacaccggacgctcttcctcgacgacagcgagaggaac 678 Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458 ||||| | ||||||||||| |||||||||| | ||||||||||||||||| ||||||| Sbjct: 679 atcgccgcaggaaaagctcttagcctccgcaccgtcctggttggcaagagggtgaggagc 738 Query: 459 aaggaggcggactacgc 475 |||||||| |||||||| Sbjct: 739 aaggaggccgactacgc 755
>dbj|AK099563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034L20, full insert sequence Length = 1147 Score = 266 bits (134), Expect = 6e-68 Identities = 230/262 (87%) Strand = Plus / Plus Query: 3 ctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgtg 62 ||||||||||||||||| |||||| | ||||||||||| || |||||||||||||||||| Sbjct: 285 ctcgccggcctcatcgctctcggctatgacgtgcacccggatgagtaccacagctacgtg 344 Query: 63 cacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgcgctccag 122 ||||||||||||||||||||| |||||||||||||||||||||||||| | || | | Sbjct: 345 cacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcgg 404 Query: 123 agcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggtcg 182 ||||| || |||||||| || ||||||||||||||||| |||||||||||||||| | || Sbjct: 405 agcatcccgcagcgcaaaattctgttcaccaactctgatcgcgcgcacatgaggaaggcg 464 Query: 183 ctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagaccatg 242 ||| |||||||| || ||||||||| | |||||||| |||||| ||||||||||||||| Sbjct: 465 ctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatg 524 Query: 243 aacccgaatctcttcggcgagg 264 ||||| | |||||||| |||| Sbjct: 525 aaccctcacctcttcggtgagg 546 Score = 145 bits (73), Expect = 2e-31 Identities = 121/137 (88%) Strand = Plus / Plus Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398 |||||| |||||||||| || |||| || ||||||||||||||||||| |||||||||| Sbjct: 618 ctgcgcatcgccggcaccaatccacaccggacgctcttcctcgacgacagcgagaggaac 677 Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458 ||||| | ||||||||||| |||||||||| | ||||||||||||||||| ||||||| Sbjct: 678 atcgccgcaggaaaagctcttagcctccgcaccgtcctggttggcaagagggtgaggagc 737 Query: 459 aaggaggcggactacgc 475 |||||||| |||||||| Sbjct: 738 aaggaggccgactacgc 754
>dbj|AK061982.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A11, full insert sequence Length = 1144 Score = 266 bits (134), Expect = 6e-68 Identities = 230/262 (87%) Strand = Plus / Plus Query: 3 ctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgtg 62 ||||||||||||||||| |||||| | ||||||||||| || |||||||||||||||||| Sbjct: 286 ctcgccggcctcatcgctctcggctatgacgtgcacccggatgagtaccacagctacgtg 345 Query: 63 cacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgcgctccag 122 ||||||||||||||||||||| |||||||||||||||||||||||||| | || | | Sbjct: 346 cacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcgg 405 Query: 123 agcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggtcg 182 ||||| || |||||||| || ||||||||||||||||| |||||||||||||||| | || Sbjct: 406 agcatcccgcagcgcaaaattctgttcaccaactctgatcgcgcgcacatgaggaaggcg 465 Query: 183 ctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagaccatg 242 ||| |||||||| || ||||||||| | |||||||| |||||| ||||||||||||||| Sbjct: 466 ctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatg 525 Query: 243 aacccgaatctcttcggcgagg 264 ||||| | |||||||| |||| Sbjct: 526 aaccctcacctcttcggtgagg 547 Score = 137 bits (69), Expect = 4e-29 Identities = 120/137 (87%) Strand = Plus / Plus Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398 |||||| |||||||||| || |||| || |||||||||||||||||| |||||||||| Sbjct: 619 ctgcgcatcgccggcaccaatccacaccggacgctcttcctcgacgacggcgagaggaac 678 Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458 ||||| | ||||||||||| |||||||||| | ||||||||||||||||| ||||||| Sbjct: 679 atcgccgcaggaaaagctcttagcctccgcaccgtcctggttggcaagagggtgaggagc 738 Query: 459 aaggaggcggactacgc 475 |||||||| |||||||| Sbjct: 739 aaggaggccgactacgc 755
>dbj|AK061528.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D11, full insert sequence Length = 1112 Score = 266 bits (134), Expect = 6e-68 Identities = 230/262 (87%) Strand = Plus / Plus Query: 3 ctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgtg 62 ||||||||||||||||| |||||| | ||||||||||| || |||||||||||||||||| Sbjct: 269 ctcgccggcctcatcgctctcggctatgacgtgcacccggatgagtaccacagctacgtg 328 Query: 63 cacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgcgctccag 122 ||||||||||||||||||||| |||||||||||||||||||||||||| | || | | Sbjct: 329 cacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccggccttctgcgg 388 Query: 123 agcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggtcg 182 ||||| || |||||||| || ||||||||||||||||| |||||||||||||||| | || Sbjct: 389 agcatcccgcagcgcaaaattctgttcaccaactctgatcgcgcgcacatgaggaaggcg 448 Query: 183 ctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagaccatg 242 ||| |||||||| || ||||||||| | |||||||| |||||| ||||||||||||||| Sbjct: 449 ctgcagcggctgagcgtcgacgagggctgcttcgacgccgtcgtgtgcttcgagaccatg 508 Query: 243 aacccgaatctcttcggcgagg 264 ||||| | |||||||| |||| Sbjct: 509 aaccctcacctcttcggtgagg 530 Score = 145 bits (73), Expect = 2e-31 Identities = 121/137 (88%) Strand = Plus / Plus Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398 |||||| |||||||||| || |||| || ||||||||||||||||||| |||||||||| Sbjct: 602 ctgcgcatcgccggcaccaatccacaccggacgctcttcctcgacgacagcgagaggaac 661 Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458 ||||| | ||||||||||| |||||||||| | ||||||||||||||||| ||||||| Sbjct: 662 atcgccgcaggaaaagctcttagcctccgcaccgtcctggttggcaagagggtgaggagc 721 Query: 459 aaggaggcggactacgc 475 |||||||| |||||||| Sbjct: 722 aaggaggccgactacgc 738
>gb|AY108507.1| Zea mays PCO092437 mRNA sequence Length = 1277 Score = 228 bits (115), Expect = 1e-56 Identities = 231/267 (86%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 2 cctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgt 61 ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 305 cctcgccgggctcatcgcgctcggctacgacgtgcacccggacgagtaccacagctacgt 364 Query: 62 gcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgccgc-gctcc 120 |||||| ||||| || |||||| |||||| |||||||||||| || || || ||| | Sbjct: 365 gcacggcaggctaccgtacgacaggatcgcgcgcgacccgcagctggc-gcggctgctgc 423 Query: 121 agagcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggt 180 ||||||| || |||||||| | |||||||||||||| ||||||||||||||| | || Sbjct: 424 agagcatcccgcagcgcaaagtgctgttcaccaactcggaccgcgcgcacatggagcggg 483 Query: 181 cgctggagcggctgggcctcgacgaggccctcttcgacggcgtcgtatgcttcgagacca 240 ||||||||||||||||| | ||||||||| |||||||| |||||| ||||||||||||| Sbjct: 484 cgctggagcggctgggcgtggacgaggccgccttcgacgccgtcgtgtgcttcgagacca 543 Query: 241 tgaacccgaatctcttcggcgaggacg 267 |||||||| | || |||||||| |||| Sbjct: 544 tgaacccgcacctgttcggcgacgacg 570 Score = 161 bits (81), Expect = 3e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398 ||||||| ||| ||| | |||||||| || ||||| ||||| ||||||| |||||||||| Sbjct: 630 ctgcgcgccgctggctccaacccacgccggacgctgttcctggacgacagcgagaggaac 689 Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458 ||||| |||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 690 atcgccgcggggaaagcgctcggcctccgcaccgccctggttggcaagagggcgaggagc 749 Query: 459 aaggaggcggactacgcgctggaga 483 ||||| |||||||||||| |||||| Sbjct: 750 aaggaagcggactacgcggtggaga 774
>emb|X82617.1|ZMSSIP Z.mays mRNA for sugar-starvation induced protein Length = 1022 Score = 176 bits (89), Expect = 4e-41 Identities = 180/209 (86%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 2 cctcgccggcctcatcgcgctcggccacgacgtgcaccccgacgagtaccacagctacgt 61 ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 64 cctcgccgggctcatcgcgctcggctacgacgtgcacccggacgagtaccacagctacgt 123 Query: 62 gcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccgc-cgcgctcc 120 |||||| ||||| || |||||| |||||| |||||||||||| | ||| | ||| | Sbjct: 124 gcacggcaggctaccgtacgacaggatcgcgcgcgacccgcagctgggcgcgcctgctgc 183 Query: 121 agagcatgccccagcgcaagatcctgttcaccaactctgaccgcgcgcacatgaggaggt 180 ||||||| || |||||||| | |||||||||||||| ||||||||||||||| | || Sbjct: 184 agagcatcccgcagcgcaaagtgctgttcaccaactcggaccgcgcgcacatggagcggg 243 Query: 181 cgctggagcggctgggcctcgacgaggcc 209 ||||||||||||||||| | ||||||||| Sbjct: 244 cgctggagcggctgggcgtggacgaggcc 272 Score = 157 bits (79), Expect = 4e-35 Identities = 121/135 (89%) Strand = Plus / Plus Query: 339 ctgcgcgtcgccggcacaaacccacgtcgaacgctcttcctcgacgacaacgagaggaac 398 ||||||| ||||||| | |||||||| || ||||| ||||| ||||||| |||||||||| Sbjct: 391 ctgcgcgccgccggctccaacccacgccggacgctgttcctggacgacagcgagaggaac 450 Query: 399 atcgcgtcgggaaaagctctcggcctccgcacagccctggttggcaagagggcgaggagc 458 ||||| |||| ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 451 atcgccgcggggaaagcgctcggcctccgcaccgccctggttggcaagagggcgaggagc 510 Query: 459 aaggaggcggactac 473 ||||| ||||||||| Sbjct: 511 aaggaagcggactac 525
>gb|AC169376.2| Sorghum bicolor clone SB_BBc0046M17, complete sequence Length = 127914 Score = 125 bits (63), Expect = 1e-25 Identities = 102/115 (88%) Strand = Plus / Plus Query: 147 ttcaccaactctgaccgcgcgcacatgaggaggtcgctggagcggctgggcctcgacgag 206 ||||||||||| ||||| |||||||||| | || || |||||||||||||| | |||||| Sbjct: 10172 ttcaccaactcggaccgggcgcacatgaagcgggcgttggagcggctgggcgtggacgag 10231 Query: 207 gccctcttcgacggcgtcgtatgcttcgagaccatgaacccgaatctcttcggcg 261 ||| ||||||||| |||||| ||||||||||||||||||||| | |||||||||| Sbjct: 10232 gccgtcttcgacgccgtcgtgtgcttcgagaccatgaacccgcacctcttcggcg 10286 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 437 ggttggcaagagggcgaggagcaaggaggcggactacgcgctggaga 483 |||||||||||||| |||||||||||| || |||||||||||||||| Sbjct: 12191 ggttggcaagagggtgaggagcaaggacgcagactacgcgctggaga 12237 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 53 cagctacgtgcacgggaggctgccctacgacgtgatcgccgccgacccgcagct 106 ||||||||||||||| ||||| || |||||| ||||| |||||||||||||||| Sbjct: 9960 cagctacgtgcacggcaggctaccgtacgacatgatccccgccgacccgcagct 10013 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 371 gctcttcctcgacgacaacgagaggaacatcgcgtcgggaaaagctctcggcctccgcac 430 ||||||||| ||||||| ||||||||||||| | | || ||||| |||||||||||||| Sbjct: 10972 gctcttcctggacgacagcgagaggaacatcaccgctgggaaagcgctcggcctccgcac 11031 Query: 431 agccctggt 439 |||||||| Sbjct: 11032 cgccctggt 11040 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 18 gcgctcggccacgacgtgcaccccgacgagtaccacag 55 ||||||||| | ||||||||||| |||||||||||||| Sbjct: 9809 gcgctcggctatgacgtgcacccggacgagtaccacag 9846
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 144 ctgttcaccaactctgaccgcgcgcacatgaggaggtcgctggagcggctgggcctcgac 203 ||||||||||||||||| |||||||||||||||| | ||||| |||||||| || ||||| Sbjct: 96769 ctgttcaccaactctgatcgcgcgcacatgaggaaggcgctgcagcggctgagcgtcgac 96828 Query: 204 gaggccctcttcgacggcgtcgtatgcttcgagaccatgaacccgaatctcttcggcgag 263 |||| | |||||||| |||||| |||||||||||||||||||| | |||||||| ||| Sbjct: 96829 gagggctgcttcgacgccgtcgtgtgcttcgagaccatgaaccctcacctcttcggtgag 96888 Query: 264 g 264 | Sbjct: 96889 g 96889 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 53 cagctacgtgcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccg 111 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 96589 cagctacgtgcacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccg 96647 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 371 gctcttcctcgacgacaacgagaggaacatcgcgtcgggaaaagctctcggcctccgcac 430 ||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 97515 gctcttcctcgacgacagcgagaggaacatcgccgcaggaaaagctcttagcctccgcac 97574 Query: 431 agccctggt 439 | |||||| Sbjct: 97575 cgtcctggt 97583 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 437 ggttggcaagagggcgaggagcaaggaggcggactacgc 475 |||||||||||||| ||||||||||||||| |||||||| Sbjct: 98594 ggttggcaagagggtgaggagcaaggaggccgactacgc 98632
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 144 ctgttcaccaactctgaccgcgcgcacatgaggaggtcgctggagcggctgggcctcgac 203 ||||||||||||||||| |||||||||||||||| | ||||| |||||||| || ||||| Sbjct: 27852639 ctgttcaccaactctgatcgcgcgcacatgaggaaggcgctgcagcggctgagcgtcgac 27852698 Query: 204 gaggccctcttcgacggcgtcgtatgcttcgagaccatgaacccgaatctcttcggcgag 263 |||| | |||||||| |||||| |||||||||||||||||||| | |||||||| ||| Sbjct: 27852699 gagggctgcttcgacgccgtcgtgtgcttcgagaccatgaaccctcacctcttcggtgag 27852758 Query: 264 g 264 | Sbjct: 27852759 g 27852759 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 53 cagctacgtgcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccg 111 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 27852459 cagctacgtgcacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccg 27852517 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 371 gctcttcctcgacgacaacgagaggaacatcgcgtcgggaaaagctctcggcctccgcac 430 ||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 27853385 gctcttcctcgacgacagcgagaggaacatcgccgcaggaaaagctcttagcctccgcac 27853444 Query: 431 agccctggt 439 | |||||| Sbjct: 27853445 cgtcctggt 27853453 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 437 ggttggcaagagggcgaggagcaaggaggcggactacgc 475 |||||||||||||| ||||||||||||||| |||||||| Sbjct: 27854464 ggttggcaagagggtgaggagcaaggaggccgactacgc 27854502 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgc 293 ||||||||||||||||||||| Sbjct: 27696195 gacgacgacgacgtcgaccgc 27696215
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 144 ctgttcaccaactctgaccgcgcgcacatgaggaggtcgctggagcggctgggcctcgac 203 ||||||||||||||||| |||||||||||||||| | ||||| |||||||| || ||||| Sbjct: 27943963 ctgttcaccaactctgatcgcgcgcacatgaggaaggcgctgcagcggctgagcgtcgac 27944022 Query: 204 gaggccctcttcgacggcgtcgtatgcttcgagaccatgaacccgaatctcttcggcgag 263 |||| | |||||||| |||||| |||||||||||||||||||| | |||||||| ||| Sbjct: 27944023 gagggctgcttcgacgccgtcgtgtgcttcgagaccatgaaccctcacctcttcggtgag 27944082 Query: 264 g 264 | Sbjct: 27944083 g 27944083 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 53 cagctacgtgcacgggaggctgccctacgacgtgatcgccgccgacccgcagctcgccg 111 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 27943783 cagctacgtgcacgggaggctgccctacgaccggatcgccgccgacccgcagctcgccg 27943841 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 371 gctcttcctcgacgacaacgagaggaacatcgcgtcgggaaaagctctcggcctccgcac 430 ||||||||||||||||| ||||||||||||||| | ||||||||||| |||||||||| Sbjct: 27944709 gctcttcctcgacgacagcgagaggaacatcgccgcaggaaaagctcttagcctccgcac 27944768 Query: 431 agccctggt 439 | |||||| Sbjct: 27944769 cgtcctggt 27944777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 437 ggttggcaagagggcgaggagcaaggaggcggactacgc 475 |||||||||||||| ||||||||||||||| |||||||| Sbjct: 27945788 ggttggcaagagggtgaggagcaaggaggccgactacgc 27945826 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgc 293 ||||||||||||||||||||| Sbjct: 27787518 gacgacgacgacgtcgaccgc 27787538
>gb|AF421538.2| Crypthecodinium cohnii BiP (BiP) mRNA, partial cds Length = 2238 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 203 cgaggccctcttcgacggcgtcg 225 ||||||||||||||||||||||| Sbjct: 987 cgaggccctcttcgacggcgtcg 1009
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 44.1 bits (22), Expect = 0.42 Identities = 31/34 (91%) Strand = Plus / Plus Query: 80 cgacgtgatcgccgccgacccgcagctcgccgcc 113 ||||||||||||| ||||||||||| || ||||| Sbjct: 1049004 cgacgtgatcgcccccgacccgcaggtcaccgcc 1049037
>ref|XM_450329.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1835 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 ccgcagctcgccgccgcgctcc 120 |||||||||||||||||||||| Sbjct: 1175 ccgcagctcgccgccgcgctcc 1154
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 tcgccgccgacccgcagctcgc 109 |||||||||||||||||||||| Sbjct: 1712464 tcgccgccgacccgcagctcgc 1712485
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 ccgcagctcgccgccgcgctcc 120 |||||||||||||||||||||| Sbjct: 4174909 ccgcagctcgccgccgcgctcc 4174888
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 caaggacgacgacgacgtcgaccgcc 294 ||||||||||||||||| |||||||| Sbjct: 8881547 caaggacgacgacgacgacgaccgcc 8881522 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 aggacgacgacgacgtcgaccgcc 294 ||||||||||||||| |||||||| Sbjct: 9565672 aggacgacgacgacgacgaccgcc 9565695
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 96 gacccgcagctcgccgccgcgctccagagc 125 |||||||||||| ||| ||||||||||||| Sbjct: 453633 gacccgcagctcaccgtcgcgctccagagc 453604
>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066C12 Length = 168874 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 ccgcagctcgccgccgcgctcc 120 |||||||||||||||||||||| Sbjct: 158390 ccgcagctcgccgccgcgctcc 158369
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 caaggacgacgacgacgtcgaccgcc 294 ||||||||||||||||| |||||||| Sbjct: 86565 caaggacgacgacgacgacgaccgcc 86540
>dbj|AK106263.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F09, full insert sequence Length = 2025 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 ccgcagctcgccgccgcgctcc 120 |||||||||||||||||||||| Sbjct: 357 ccgcagctcgccgccgcgctcc 378
>dbj|AK101561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050D17, full insert sequence Length = 1833 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 99 ccgcagctcgccgccgcgctcc 120 |||||||||||||||||||||| Sbjct: 1173 ccgcagctcgccgccgcgctcc 1152
>ref|XM_469388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1431 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgc 293 ||||||||||||||||||||| Sbjct: 118 gacgacgacgacgtcgaccgc 138
>ref|XM_959815.1| Neurospora crassa OR74A hypothetical protein (NCU09091.1) partial mRNA Length = 1644 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 tcttcctcgacgacaacgaga 393 ||||||||||||||||||||| Sbjct: 178 tcttcctcgacgacaacgaga 198
>ref|XM_331482.1| Neurospora crassa OR74A hypothetical protein (NCU09091.1) partial mRNA Length = 1644 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 373 tcttcctcgacgacaacgaga 393 ||||||||||||||||||||| Sbjct: 178 tcttcctcgacgacaacgaga 198
>ref|XM_847960.1| PREDICTED: Canis familiaris hypothetical protein LOC610450 (LOC610450), mRNA Length = 792 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 tgaggaggtcgctggagcggctggg 196 |||||||||||||||||||| |||| Sbjct: 620 tgaggaggtcgctggagcggatggg 644
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 323 cgccttcgccaccgccctgcgcgtcgccg 351 |||| |||||||||||||||||| ||||| Sbjct: 2649801 cgccgtcgccaccgccctgcgcgccgccg 2649773
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 gatcgccgccgacccgcagct 106 ||||||||||||||||||||| Sbjct: 4464931 gatcgccgccgacccgcagct 4464911 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 cgacgaggccctcttcgacg 219 |||||||||||||||||||| Sbjct: 5355618 cgacgaggccctcttcgacg 5355599 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 agctcgccgccgcgctccag 122 |||||||||||||||||||| Sbjct: 3300726 agctcgccgccgcgctccag 3300745
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 gacgacgacgacgtcgaccgc 293 ||||||||||||||||||||| Sbjct: 117699 gacgacgacgacgtcgaccgc 117679
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 cgccgacccgcagctcgccgc 112 ||||||||||||||||||||| Sbjct: 2642932 cgccgacccgcagctcgccgc 2642912 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 cggcctcatcgcgctcggccacgac 32 |||||||||||||||||||| |||| Sbjct: 1488396 cggcctcatcgcgctcggcctcgac 1488420
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 323 cgccttcgccaccgccctgcgcgtcgccggcac 355 ||||||||||| | || |||||||||||||||| Sbjct: 6796143 cgccttcgccagcaccttgcgcgtcgccggcac 6796175 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 gacgacgacgacgtcgaccgcccc 296 ||||||||||||||||| |||||| Sbjct: 331280 gacgacgacgacgtcgagcgcccc 331257
>dbj|AB055927.1| Procambarus clarkii mRNA for projectin, complete cds Length = 27060 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 412 aagctctcggcctccgcacagccct 436 ||||||||||||||| ||||||||| Sbjct: 252 aagctctcggcctccccacagccct 276
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 90 gccgccgacccgcagctcgcc 110 ||||||||||||||||||||| Sbjct: 2744379 gccgccgacccgcagctcgcc 2744399 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ggacgccaaggacgacgacg 282 |||||||||||||||||||| Sbjct: 1518308 ggacgccaaggacgacgacg 1518327
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 cctcgccggcctcatcgcgctcggc 26 |||||||| |||||||||||||||| Sbjct: 348669 cctcgccgtcctcatcgcgctcggc 348645
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 111 gccgcgctccagagcatgccccagc 135 ||||||||||||| ||||||||||| Sbjct: 3138366 gccgcgctccagaccatgccccagc 3138390
>gb|L32859.1|ONHHMG1X Rainbow trout HMG-1 gene exons 2-5, complete cds Length = 3882 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 266 cgccaaggacgacgacgacgtcgac 290 |||||||||||||||||||| |||| Sbjct: 3042 cgccaaggacgacgacgacgacgac 3066
>ref|XM_549810.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3709 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgcccc 296 ||||||||||||| |||||||||| Sbjct: 289 gacgacgacgacgacgaccgcccc 312
>gb|AC152105.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A3, complete sequence Length = 40909 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 cgccaaggacgacgacgacgtcga 289 ||||| |||||||||||||||||| Sbjct: 21686 cgccatggacgacgacgacgtcga 21663
>ref|XM_479452.1| Oryza sativa (japonica cultivar-group), mRNA Length = 699 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgccgacccgcagctcgccgccgc 115 |||||||| ||||||||||||||| Sbjct: 282 cgccgacctgcagctcgccgccgc 305
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 ccggcctcatcgcgctcggc 26 |||||||||||||||||||| Sbjct: 3179358 ccggcctcatcgcgctcggc 3179339
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ccggcctcatcgcgctcggc 26 |||||||||||||||||||| Sbjct: 1621493 ccggcctcatcgcgctcggc 1621512
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 tgatcgccgccgacccgcagctcg 108 ||||| |||||||||||||||||| Sbjct: 927171 tgatcaccgccgacccgcagctcg 927194
>ref|XM_001002302.1| PREDICTED: Mus musculus similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT5 (Solute carrier family 6 member 16) (LOC672880), mRNA Length = 2347 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 atcctgttcaccaactctga 160 |||||||||||||||||||| Sbjct: 185 atcctgttcaccaactctga 166
>ref|XM_355900.4| PREDICTED: Mus musculus solute carrier family 6, member 16 (LOC381884), mRNA Length = 2392 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 atcctgttcaccaactctga 160 |||||||||||||||||||| Sbjct: 185 atcctgttcaccaactctga 166
>ref|XM_914689.2| PREDICTED: Mus musculus solute carrier family 6, member 16 (LOC381884), mRNA Length = 2392 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 atcctgttcaccaactctga 160 |||||||||||||||||||| Sbjct: 185 atcctgttcaccaactctga 166
>ref|XM_800646.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503477.10) partial mRNA Length = 1065 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 cggcgaggacgccaaggacgacgacgacgtcg 288 ||||||||||| | | |||||||||||||||| Sbjct: 50 cggcgaggacgacgacgacgacgacgacgtcg 81
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 acgacgtgatcgccgccgac 98 |||||||||||||||||||| Sbjct: 1749166 acgacgtgatcgccgccgac 1749185 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tcgccggcctcatcgcgctcggcc 27 |||||||||| ||||||||||||| Sbjct: 1135100 tcgccggcctgatcgcgctcggcc 1135077 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ctcgccggcctcatcgcgctcggc 26 ||||||||||| |||||||||||| Sbjct: 379922 ctcgccggcctgatcgcgctcggc 379945
>emb|X02666.1|SGHMGT3 Trout mRNA for high mobility group protein HMG-T Length = 716 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cgccaaggacgacgacgacg 285 |||||||||||||||||||| Sbjct: 534 cgccaaggacgacgacgacg 553
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ccggcctcatcgcgctcggc 26 |||||||||||||||||||| Sbjct: 1508641 ccggcctcatcgcgctcggc 1508660
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgacgacgacgtcgaccgcc 294 |||||||||||||||||||| Sbjct: 174875 cgacgacgacgtcgaccgcc 174894
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 cgacgaggccctcttcgacg 219 |||||||||||||||||||| Sbjct: 279842 cgacgaggccctcttcgacg 279861
>emb|AJ002531.1|BJAJ2531 Bradyrhizobium japonicum nosRZDFYLX gene cluster for nitrous-oxide reduction Length = 10022 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 gacgacgacgacgtcgaccgcccc 296 ||||||||||||||||| |||||| Sbjct: 7310 gacgacgacgacgtcgagcgcccc 7287
>emb|AJ585192.1| Streptomyces resistomycificus remA-R gene cluster Length = 16662 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 328 tcgccaccgccctgcgcgtcgccg 351 |||||||||| ||||||||||||| Sbjct: 14579 tcgccaccgcgctgcgcgtcgccg 14556
>gb|AC010664.7| Drosophila melanogaster 3L BAC RP98-2G4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 155615 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 aggacgacgacgacgtcgac 290 |||||||||||||||||||| Sbjct: 138364 aggacgacgacgacgtcgac 138383
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cgccaaggacgacgacgacg 285 |||||||||||||||||||| Sbjct: 4921098 cgccaaggacgacgacgacg 4921079
>gb|AC112727.4| Drosophila melanogaster 3L BAC RP98-15L14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 157739 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 aggacgacgacgacgtcgac 290 |||||||||||||||||||| Sbjct: 123894 aggacgacgacgacgtcgac 123913
>ref|NM_137261.1| Drosophila melanogaster CG15709-RA (CG15709), mRNA Length = 657 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 aggacgacgacgacgtcgac 290 |||||||||||||||||||| Sbjct: 428 aggacgacgacgacgtcgac 447
>gb|AF255693.1|AF255693 Cassidinidea sp. 18S ribosomal RNA gene, complete sequence Length = 2743 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 gacgacgacgacgtcgaccgcccc 296 |||||||||||||||| ||||||| Sbjct: 2033 gacgacgacgacgtcgtccgcccc 2010
>gb|AC104612.1| Drosophila melanogaster, chromosome 2R, region 52F-53A, BAC clone BACR29I14, complete sequence Length = 169877 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 aggacgacgacgacgtcgac 290 |||||||||||||||||||| Sbjct: 9416 aggacgacgacgacgtcgac 9435
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 tcttcgacggcgtcgtatgcttcg 234 |||||||| ||||||||||||||| Sbjct: 133798 tcttcgaccgcgtcgtatgcttcg 133821
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 254 cttcggcgaggacgccaaggacgacgac 281 ||||||||||| |||||||||| ||||| Sbjct: 232892 cttcggcgagggcgccaaggaccacgac 232865
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 cgccttcgccaccgccctgc 342 |||||||||||||||||||| Sbjct: 2529257 cgccttcgccaccgccctgc 2529238
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tcgccgccgacccgcagctc 107 |||||||||||||||||||| Sbjct: 5097835 tcgccgccgacccgcagctc 5097854 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 tcgccggcctcatcgcgctcggcc 27 |||||||||| ||||||||||||| Sbjct: 1022825 tcgccggcctgatcgcgctcggcc 1022802
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 92 cgccgacccgcagctcgccgccgcgctc 119 ||||||||||||| ||||||||| |||| Sbjct: 136368 cgccgacccgcagatcgccgccgggctc 136341
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgccgacccgcagctcgccgccgc 115 |||||||| ||||||||||||||| Sbjct: 28286414 cgccgacctgcagctcgccgccgc 28286437
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgcccc 296 ||||||||||||| |||||||||| Sbjct: 72110 gacgacgacgacgacgaccgcccc 72133
>gb|AC009356.3|AC009356 Drosophila melanogaster, chromosome 2R, region 52E-53A, BAC clone BACR25I17, complete sequence Length = 157835 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aggacgacgacgacgtcgac 290 |||||||||||||||||||| Sbjct: 15934 aggacgacgacgacgtcgac 15915
>gb|AC007572.5|AC007572 Drosophila melanogaster, chromosome 2R, region 53A-53B, BAC clone BACR21B04, complete sequence Length = 156823 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aggacgacgacgacgtcgac 290 |||||||||||||||||||| Sbjct: 109352 aggacgacgacgacgtcgac 109333
>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence Length = 90348 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 gacgacgtcgaccgccccgccgtc 302 |||||||||||||||| ||||||| Sbjct: 9678 gacgacgtcgaccgccgcgccgtc 9655
>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0693E08 Length = 157969 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 aggacgacgacgacgtcgaccgcc 294 ||||||||||||||| |||||||| Sbjct: 29890 aggacgacgacgacgacgaccgcc 29913
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgcccc 296 ||||||||||||| |||||||||| Sbjct: 69912 gacgacgacgacgacgaccgcccc 69935
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgccgacccgcagctcgccgccgc 115 |||||||| ||||||||||||||| Sbjct: 141959 cgccgacctgcagctcgccgccgc 141982
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0470D12 Length = 157248 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgccgacccgcagctcgccgccgc 115 |||||||| ||||||||||||||| Sbjct: 11977 cgccgacctgcagctcgccgccgc 12000
>gb|AE005000.1| Halobacterium sp. NRC-1 section 31 of 170 of the complete genome Length = 11487 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 cgacgacgacgtcgaccgcc 294 |||||||||||||||||||| Sbjct: 644 cgacgacgacgtcgaccgcc 663
>dbj|AK122118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128C08, full insert sequence Length = 3706 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgcccc 296 ||||||||||||| |||||||||| Sbjct: 289 gacgacgacgacgacgaccgcccc 312
>dbj|AK111180.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-F12, full insert sequence Length = 3298 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 cggccacgacgtgcaccccgacga 46 ||||||||||||||| |||||||| Sbjct: 1407 cggccacgacgtgcagcccgacga 1430
>dbj|AK099952.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123J12, full insert sequence Length = 4240 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgcccc 296 ||||||||||||| |||||||||| Sbjct: 296 gacgacgacgacgacgaccgcccc 319
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cgccggcctcatcgcgctcggcca 28 |||||||||||| ||||||||||| Sbjct: 33587 cgccggcctcatggcgctcggcca 33564
>ref|NM_208688.1| Eremothecium gossypii ACL069Cp (ACL069C), mRNA Length = 1935 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 254 cttcggcgaggacgccaaggacgacgac 281 ||||||||||| |||||||||| ||||| Sbjct: 1482 cttcggcgagggcgccaaggaccacgac 1509
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cgccggcctcatcgcgctcggcca 28 |||||||||||| ||||||||||| Sbjct: 33587 cgccggcctcatggcgctcggcca 33564
>gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43 of 73 of the complete sequence Length = 258223 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aggacgacgacgacgtcgac 290 |||||||||||||||||||| Sbjct: 51549 aggacgacgacgacgtcgac 51530
>gb|AE003483.4| Drosophila melanogaster chromosome 3L, section 17 of 83 of the complete sequence Length = 175890 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 aggacgacgacgacgtcgac 290 |||||||||||||||||||| Sbjct: 124660 aggacgacgacgacgtcgac 124679
>gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, complete sequence Length = 255342 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 gctggagcggctgggcctcgacga 205 ||||||| |||||||||||||||| Sbjct: 150407 gctggagaggctgggcctcgacga 150430
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 gccgccgacccgcagctcgccgccgcgc 117 ||||||| || ||||||||||||||||| Sbjct: 750874 gccgccgcccagcagctcgccgccgcgc 750901
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 gcgctcggccacgacgtgca 37 |||||||||||||||||||| Sbjct: 1654206 gcgctcggccacgacgtgca 1654187
>emb|BX295541.1|HS172N19 Homo sapiens chromosome X PAC RP1-172N19 map Xq13 markers PHKA1-DXS227, complete sequence Length = 176589 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccg 292 |||||||||||||||||||| Sbjct: 154851 gacgacgacgacgtcgaccg 154870
>gb|AC004318.1|AC004318 Drosophila melanogaster DNA sequence (P1 DS06464 (D212)), complete sequence Length = 86188 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 aggacgacgacgacgtcgac 290 |||||||||||||||||||| Sbjct: 17293 aggacgacgacgacgtcgac 17274
>gb|AC150897.2| Mus musculus BAC clone RP23-289F7 from 7, complete sequence Length = 227073 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 atcctgttcaccaactctga 160 |||||||||||||||||||| Sbjct: 87112 atcctgttcaccaactctga 87131
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 tcgccgccgacccgcagctcgccg 111 ||||||||| |||||||||||||| Sbjct: 92502 tcgccgccggcccgcagctcgccg 92479
>gb|U75434.1|SAU75434 Streptomyces actuosus 23S rRNA methyltransferase (nshR) and NshA (nshA) genes, complete cds Length = 3444 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gatcgccgccgacccgcagc 105 |||||||||||||||||||| Sbjct: 2409 gatcgccgccgacccgcagc 2390
>emb|AL353999.3|HS73J07 Homo sapiens chromosome X sequence from BAC CEPHB73J07 region PHKA1-DXS227 map Xq13, complete sequence Length = 126374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 gacgacgacgacgtcgaccg 292 |||||||||||||||||||| Sbjct: 78199 gacgacgacgacgtcgaccg 78180
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgcccc 296 ||||||||||||| |||||||||| Sbjct: 20656 gacgacgacgacgacgaccgcccc 20679
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 gacgacgacgacgtcgaccgcccc 296 ||||||||||||| |||||||||| Sbjct: 57040 gacgacgacgacgacgaccgcccc 57063 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,767,784 Number of Sequences: 3902068 Number of extensions: 2767784 Number of successful extensions: 105876 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100272 Number of HSP's gapped (non-prelim): 5598 length of query: 485 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 463 effective length of database: 17,147,199,772 effective search space: 7939153494436 effective search space used: 7939153494436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
