Clone Name | basd3a04 |
---|---|
Clone Library Name | barley_pub |
>emb|Z22874.1|TABETGLUB T.aestivum (1,3;1,4) beta glucanase mRNA, complete CDS Length = 1426 Score = 375 bits (189), Expect = e-101 Identities = 221/232 (95%) Strand = Plus / Plus Query: 57 caacgcagctagagagagaaagagaatggcaggccaaggcgttgcctccatgttggctct 116 ||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||| Sbjct: 26 caacgcagctagagagacaaagagaatggcgagccaaggtgttgcctccatgttcgctct 85 Query: 117 ggcattgctcctcggagccttcgcctccatcccacaaagcgtggagtccatcggggtgtg 176 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 86 ggcattgctcctcggagccttcgcctccatcccacaaagcgtcgagtccatcggggtgtg 145 Query: 177 ctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaacatgttcaagtc 236 ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 146 ctacggcatgagcgccaacaacctgccggcggcgagcaccgtcgtcagcatgttcaagtc 205 Query: 237 caacgggatcaactccatgcggntgtacgctcccgaccaggcggcgctgcag 288 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 206 caacggcatcaactccatgcggctgtacgctcccgaccaggcggcgctgcag 257
>gb|BC032056.1| Homo sapiens, clone IMAGE:5193698, mRNA Length = 363 Score = 375 bits (189), Expect = e-101 Identities = 221/232 (95%) Strand = Plus / Plus Query: 57 caacgcagctagagagagaaagagaatggcaggccaaggcgttgcctccatgttggctct 116 ||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||| Sbjct: 54 caacgcagctagagagacaaagagaatggcgagccaaggtgttgcctccatgttcgctct 113 Query: 117 ggcattgctcctcggagccttcgcctccatcccacaaagcgtggagtccatcggggtgtg 176 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114 ggcattgctcctcggagccttcgcctccatcccacaaagcgtcgagtccatcggggtgtg 173 Query: 177 ctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaacatgttcaagtc 236 ||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| Sbjct: 174 ctacggcatgagcgccaacaacctgccggcggcgagcaccgtcgtcagcatgttcaagtc 233 Query: 237 caacgggatcaactccatgcggntgtacgctcccgaccaggcggcgctgcag 288 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 234 caacggcatcaactccatgcggctgtacgctcccgaccaggcggcgctgcag 285
>gb|BC028338.1| Homo sapiens, clone IMAGE:5195357, mRNA Length = 363 Score = 335 bits (169), Expect = 5e-89 Identities = 207/220 (94%) Strand = Plus / Plus Query: 69 agagagaaagagaatggcaggccaaggcgttgcctccatgttggctctggcattgctcct 128 |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| Sbjct: 58 agagagaaagagaatggcgagccaaggcgttgcctccatgttcgctctcgcattgctcct 117 Query: 129 cggagccttcgcctccatcccacaaagcgtggagtccatcggggtgtgctacggcatgag 188 ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 118 cggggccttcgcctccatcccacaaagcgtcgagtccatcggagtgtgctacggcatgag 177 Query: 189 cgccaacaatctgccggcggcgagcaccgtggtcaacatgttcaagtccaacgggatcaa 248 ||||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||| Sbjct: 178 cgccaacaacctgccggcggcgagcaccgtcgtcagcatgttcaagtccaacggcatcaa 237 Query: 249 ctccatgcggntgtacgctcccgaccaggcggcgctgcag 288 |||||||||| ||||||| ||||||||||||||||||||| Sbjct: 238 ctccatgcggctgtacgcccccgaccaggcggcgctgcag 277
>gb|DQ294235.1| Triticum aestivum (1,3;1,4) beta-glucanase mRNA, partial cds Length = 913 Score = 305 bits (154), Expect = 4e-80 Identities = 171/177 (96%) Strand = Plus / Plus Query: 112 gctctggcattgctcctcggagccttcgcctccatcccacaaagcgtggagtccatcggg 171 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5 gctctggcattgctcctcggagccttcgcctccatcccacaaagcgtcgagtccatcggg 64 Query: 172 gtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaacatgttc 231 |||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| Sbjct: 65 gtgtgctacggcatgagcgccaacaacctgccggcggcgagcaccgtcgtcagcatgttc 124 Query: 232 aagtccaacgggatcaactccatgcggntgtacgctcccgaccaggcggcgctgcag 288 ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 125 aagtccaacggcatcaactccatgcggctgtacgctcccgaccaggcggcgctgcag 181
>emb|Z15131.1|ASBGLUCAN A.sativa mRNA for beta glucanase Length = 1448 Score = 295 bits (149), Expect = 4e-77 Identities = 184/196 (93%) Strand = Plus / Plus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 35 gccaaggtgttgcctccatgttcgctctcgcattgctcctcggagccttcgcctccatcc 94 Query: 149 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 208 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 95 cacaaagcgtggagtccatcggcgtttgctacggcatgagcgccaacaacctgccggcgg 154 Query: 209 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctc 268 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 155 cgagcaccgtggtgggcatgttcaagtccaacgggatcaactccatgcggctgtacgcgc 214 Query: 269 ccgaccaggcggcgct 284 | |||||||||||||| Sbjct: 215 cggaccaggcggcgct 230
>emb|X52572.1|HVBDG Barley DNA for (1-3,1-4)-beta-D-glucanase (EC 3.2.1.73) Length = 6260 Score = 260 bits (131), Expect = 2e-66 Identities = 133/134 (99%) Strand = Plus / Plus Query: 155 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4540 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 4599 Query: 215 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctcccgacc 274 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4600 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgacc 4659 Query: 275 aggcggcgctgcag 288 |||||||||||||| Sbjct: 4660 aggcggcgctgcag 4673 Score = 250 bits (126), Expect = 2e-63 Identities = 133/134 (99%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 22 agccttggcatcacccacccacaccctgcaccctccaacgcagctagagagagaaagaga 81 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1918 agccttggcatcacccacccacaccct-caccctccaacgcagctagagagagaaagaga 1976 Query: 82 atggcaggccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcc 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1977 atggcaggccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcc 2036 Query: 142 tccatcccacaaag 155 |||||||||||||| Sbjct: 2037 tccatcccacaaag 2050
>emb|X56775.1|HVGLB1 H.vulgare Glb 1 gene for 1-3,1-4-beta-D-glucanase Length = 4849 Score = 260 bits (131), Expect = 2e-66 Identities = 133/134 (99%) Strand = Plus / Plus Query: 155 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3533 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 3592 Query: 215 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctcccgacc 274 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3593 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgacc 3652 Query: 275 aggcggcgctgcag 288 |||||||||||||| Sbjct: 3653 aggcggcgctgcag 3666 Score = 250 bits (126), Expect = 2e-63 Identities = 133/134 (99%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 22 agccttggcatcacccacccacaccctgcaccctccaacgcagctagagagagaaagaga 81 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 896 agccttggcatcacccacccacaccct-caccctccaacgcagctagagagagaaagaga 954 Query: 82 atggcaggccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcc 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 atggcaggccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcc 1014 Query: 142 tccatcccacaaag 155 |||||||||||||| Sbjct: 1015 tccatcccacaaag 1028
>emb|X56260.1|HVGLUEND Barley DNA for (1,3;1,4)-beta-glucanase.(EC number 3.2.1.73) Length = 4643 Score = 260 bits (131), Expect = 2e-66 Identities = 133/134 (99%) Strand = Plus / Plus Query: 155 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3133 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 3192 Query: 215 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctcccgacc 274 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3193 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggctgtacgctcccgacc 3252 Query: 275 aggcggcgctgcag 288 |||||||||||||| Sbjct: 3253 aggcggcgctgcag 3266 Score = 250 bits (126), Expect = 2e-63 Identities = 133/134 (99%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 22 agccttggcatcacccacccacaccctgcaccctccaacgcagctagagagagaaagaga 81 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 487 agccttggcatcacccacccacaccct-caccctccaacgcagctagagagagaaagaga 545 Query: 82 atggcaggccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcc 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 atggcaggccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcc 605 Query: 142 tccatcccacaaag 155 |||||||||||||| Sbjct: 606 tccatcccacaaag 619
>gb|M62740.1|BLYGLB2 Hordeum vulgare 1,3-1,4-beta-D glucan 4-glucanohydrolase (Glb 2) gene, intron 1 Length = 5159 Score = 196 bits (99), Expect = 3e-47 Identities = 125/134 (93%) Strand = Plus / Plus Query: 155 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 214 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4061 gcgtggagtcgatcggggtgtgctacggcatgagcgccaacaacctgccggcggcgagca 4120 Query: 215 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctcccgacc 274 |||| || | |||||||||||||||||||||||| || |||||| ||||||||||| ||| Sbjct: 4121 ccgtcgtgagcatgttcaagtccaacgggatcaaatcgatgcggctgtacgctcccaacc 4180 Query: 275 aggcggcgctgcag 288 |||||||||||||| Sbjct: 4181 aggcggcgctgcag 4194 Score = 77.8 bits (39), Expect = 2e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 |||||||||||||||||||||| |||| |||||||| |||||||||||||| || |||| Sbjct: 1043 gccaaggcgttgcctccatgttcactctcgcattgcttctcggagccttcgcgtctatcc 1102 Query: 149 cac 151 ||| Sbjct: 1103 cac 1105
>gb|M13237.1|BLYGLUCB Barley beta glucanase mRNA Length = 874 Score = 194 bits (98), Expect = 1e-46 Identities = 130/141 (92%) Strand = Plus / Plus Query: 148 ccacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcg 207 |||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 ccaccaagcgtggagtcgatcggggtgtgctacggcatgagcgccaacaacctgccggcg 60 Query: 208 gcgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgct 267 ||||||||||| || | ||||||||||| |||||||||||| || |||||| |||||||| Sbjct: 61 gcgagcaccgtcgtgagcatgttcaagttcaacgggatcaaatcgatgcggctgtacgct 120 Query: 268 cccgaccaggcggcgctgcag 288 ||| ||||||||||||||||| Sbjct: 121 cccaaccaggcggcgctgcag 141
>emb|Z22873.1|TABETGLUA T.aestivum beta glucanase mRNA, complete CDS Length = 1434 Score = 188 bits (95), Expect = 7e-45 Identities = 124/134 (92%) Strand = Plus / Plus Query: 155 gcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagca 214 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110 gcgtcgagtccatcggggtgtgctacggcatgagcgccaacaacctgccggcggcgagca 169 Query: 215 ccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctcccgacc 274 |||| || | |||||||||||||||||| ||||||||||||||| | || || ||||||| Sbjct: 170 ccgtcgtgagcatgttcaagtccaacggtatcaactccatgcggctatatgcccccgacc 229 Query: 275 aggcggcgctgcag 288 |||||||||||||| Sbjct: 230 aggcggcgctgcag 243
>ref|XM_475161.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 137 bits (69), Expect = 2e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 8 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 67 Query: 149 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 208 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 68 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 127 Query: 209 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctc 268 ||||| | ||||| |||| | |||||||| |||| || |||||| ||||||| | Sbjct: 128 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 187 Query: 269 ccgaccaggcggcgctgcag 288 | |||||||||||||||||| Sbjct: 188 cggaccaggcggcgctgcag 207
>gb|AY768944.1| Oryza sativa (japonica cultivar-group) endo-1,3;1,4-beta-glucanase mRNA, complete cds Length = 1579 Score = 137 bits (69), Expect = 2e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 119 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 178 Query: 149 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 208 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 179 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 238 Query: 209 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctc 268 ||||| | ||||| |||| | |||||||| |||| || |||||| ||||||| | Sbjct: 239 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 298 Query: 269 ccgaccaggcggcgctgcag 288 | |||||||||||||||||| Sbjct: 299 cggaccaggcggcgctgcag 318
>gb|AF323610.1|AF323610 Oryza sativa glucanase (GLU) mRNA, complete cds Length = 1573 Score = 137 bits (69), Expect = 2e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 105 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 164 Query: 149 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 208 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 165 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 224 Query: 209 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctc 268 ||||| | ||||| |||| | |||||||| |||| || |||||| ||||||| | Sbjct: 225 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 284 Query: 269 ccgaccaggcggcgctgcag 288 | |||||||||||||||||| Sbjct: 285 cggaccaggcggcgctgcag 304
>dbj|AK121825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099G01, full insert sequence Length = 1606 Score = 137 bits (69), Expect = 2e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 139 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 198 Query: 149 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 208 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 199 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 258 Query: 209 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctc 268 ||||| | ||||| |||| | |||||||| |||| || |||||| ||||||| | Sbjct: 259 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 318 Query: 269 ccgaccaggcggcgctgcag 288 | |||||||||||||||||| Sbjct: 319 cggaccaggcggcgctgcag 338
>dbj|AK060867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H03, full insert sequence Length = 1565 Score = 137 bits (69), Expect = 2e-29 Identities = 167/200 (83%) Strand = Plus / Plus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 135 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 194 Query: 149 cacaaagcgtggagtccatcggggtgtgctacggcatgagcgccaacaatctgccggcgg 208 | |||| | |||| | |||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 195 ctcaaaaggcggaggcgatcggggtgtgctacggcatgagcgcgaacaacctgccgccgg 254 Query: 209 cgagcaccgtggtcaacatgttcaagtccaacgggatcaactccatgcggntgtacgctc 268 ||||| | ||||| |||| | |||||||| |||| || |||||| ||||||| | Sbjct: 255 cgagctcggtggtggggatgtaccgctccaacggcatcacgtcgatgcggctgtacgcgc 314 Query: 269 ccgaccaggcggcgctgcag 288 | |||||||||||||||||| Sbjct: 315 cggaccaggcggcgctgcag 334
>dbj|AB108313.1| Phleum pratense DNA, SSR, microsatellite B02-C07 Length = 564 Score = 89.7 bits (45), Expect = 5e-15 Identities = 71/77 (92%), Gaps = 2/77 (2%) Strand = Plus / Plus Query: 81 aatggcaggccaaggc-gttgcctccatgttggctctggcattgctcctc-ggagccttc 138 ||||||| ||||||| |||||||||||||| ||||| |||||||||||| ||||||||| Sbjct: 174 aatggcaagccaagggtgttgcctccatgttcgctctcgcattgctcctcgggagccttc 233 Query: 139 gcctccatcccacaaag 155 ||||||||||||||||| Sbjct: 234 gcctccatcccacaaag 250
>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12, complete sequence Length = 121293 Score = 87.7 bits (44), Expect = 2e-14 Identities = 103/123 (83%) Strand = Plus / Minus Query: 166 atcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaac 225 |||||||||||||||||||||||||| ||||| |||||| |||||||| | ||||| Sbjct: 94115 atcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagctcggtggtgggg 94056 Query: 226 atgttcaagtccaacgggatcaactccatgcggntgtacgctcccgaccaggcggcgctg 285 |||| | |||||||| |||| || |||||| ||||||| || ||||||||||||||| Sbjct: 94055 atgtaccgctccaacggcatcacgtcgatgcggctgtacgcgccggaccaggcggcgctg 93996 Query: 286 cag 288 ||| Sbjct: 93995 cag 93993 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 97344 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 97285 Query: 149 cacaaag 155 | ||||| Sbjct: 97284 ctcaaag 97278
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 2e-14 Identities = 103/123 (83%) Strand = Plus / Minus Query: 166 atcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtggtcaac 225 |||||||||||||||||||||||||| ||||| |||||| |||||||| | ||||| Sbjct: 17963366 atcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagctcggtggtgggg 17963307 Query: 226 atgttcaagtccaacgggatcaactccatgcggntgtacgctcccgaccaggcggcgctg 285 |||| | |||||||| |||| || |||||| ||||||| || ||||||||||||||| Sbjct: 17963306 atgtaccgctccaacggcatcacgtcgatgcggctgtacgcgccggaccaggcggcgctg 17963247 Query: 286 cag 288 ||| Sbjct: 17963246 cag 17963244 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 17966595 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 17966536 Query: 149 cacaaag 155 | ||||| Sbjct: 17966535 ctcaaag 17966529
>emb|X58877.1|OSGNS1 Oryza sativa gns1 gene for beta-glucanase Length = 6614 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 166 atcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 213 |||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 4518 atcggggtgtgctacggcatgagcgcgaacaacctgccgccggcgagc 4565 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 1295 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 1354 Query: 149 cacaaag 155 | ||||| Sbjct: 1355 ctcaaag 1361
>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06, complete sequence Length = 148029 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Minus Query: 89 gccaaggcgttgcctccatgttggctctggcattgctcctcggagccttcgcctccatcc 148 ||||||| || ||||||||||| ||||| |||||||||||||| ||||| |||||||| | Sbjct: 1922 gccaaggtgtagcctccatgttcgctctcgcattgctcctcggtgcctttgcctccattc 1863 Query: 149 cacaaag 155 | ||||| Sbjct: 1862 ctcaaag 1856
>ref|NM_189709.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 999 Score = 65.9 bits (33), Expect = 7e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 220 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 71 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 130 Query: 221 tcaacatgttcaagtccaacgggatcaactccatgcg 257 | || | | ||||||||| |||||| |||||||||| Sbjct: 131 tgaagctctacaagtccaaggggatcgactccatgcg 167
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 7e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 220 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 41342332 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 41342391 Query: 221 tcaacatgttcaagtccaacgggatcaactccatgcg 257 | || | | ||||||||| |||||| |||||||||| Sbjct: 41342392 tgaagctctacaagtccaaggggatcgactccatgcg 41342428 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 tccatcggggtgtgctacggcatga 187 |||||||| |||||||||||||||| Sbjct: 41533245 tccatcggcgtgtgctacggcatga 41533221 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccatcggggtgtgctacggcatg 186 |||||||| ||||||||||||||| Sbjct: 41622966 tccatcggcgtgtgctacggcatg 41622989
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 65.9 bits (33), Expect = 7e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 220 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 33825 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 33884 Query: 221 tcaacatgttcaagtccaacgggatcaactccatgcg 257 | || | | ||||||||| |||||| |||||||||| Sbjct: 33885 tgaagctctacaagtccaaggggatcgactccatgcg 33921
>gb|U72252.1|OSU72252 Oryza sativa beta-1,3-glucanase precursor (Gns6) gene, complete cds Length = 2169 Score = 65.9 bits (33), Expect = 7e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 220 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 1241 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 1300 Query: 221 tcaacatgttcaagtccaacgggatcaactccatgcg 257 | || | | ||||||||| |||||| |||||||||| Sbjct: 1301 tgaagctctacaagtccaaggggatcgactccatgcg 1337
>dbj|AK105972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F03, full insert sequence Length = 1240 Score = 65.9 bits (33), Expect = 7e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 220 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 95 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 154 Query: 221 tcaacatgttcaagtccaacgggatcaactccatgcg 257 | || | | ||||||||| |||||| |||||||||| Sbjct: 155 tgaagctctacaagtccaaggggatcgactccatgcg 191
>dbj|AK068247.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136H16, full insert sequence Length = 1245 Score = 65.9 bits (33), Expect = 7e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagcaccgtgg 220 ||||||| || |||||||||||| ||| || |||||| ||||||||||||||| ||| | Sbjct: 100 agtccattggcgtgtgctacggcgtgatcggcaacaacctgccggcggcgagcgacgtcg 159 Query: 221 tcaacatgttcaagtccaacgggatcaactccatgcg 257 | || | | ||||||||| |||||| |||||||||| Sbjct: 160 tgaagctctacaagtccaaggggatcgactccatgcg 196
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.061 Identities = 23/23 (100%) Strand = Plus / Minus Query: 59 acgcagctagagagagaaagaga 81 ||||||||||||||||||||||| Sbjct: 21460864 acgcagctagagagagaaagaga 21460842
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 46.1 bits (23), Expect = 0.061 Identities = 23/23 (100%) Strand = Plus / Minus Query: 59 acgcagctagagagagaaagaga 81 ||||||||||||||||||||||| Sbjct: 18048 acgcagctagagagagaaagaga 18026
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 46.1 bits (23), Expect = 0.061 Identities = 23/23 (100%) Strand = Plus / Minus Query: 59 acgcagctagagagagaaagaga 81 ||||||||||||||||||||||| Sbjct: 95364 acgcagctagagagagaaagaga 95342
>gb|AC106028.11| Homo sapiens chromosome 15, clone CTD-2313J17, complete sequence Length = 115174 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 66 tagagagagaaagagaatggca 87 |||||||||||||||||||||| Sbjct: 95702 tagagagagaaagagaatggca 95681
>ref|NM_189749.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1032 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 163 tccatcggggtgtgctacggcatga 187 |||||||| |||||||||||||||| Sbjct: 7 tccatcggcgtgtgctacggcatga 31
>gb|AC107842.13| Mus musculus chromosome 1, clone RP23-304O9, complete sequence Length = 215781 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 33 cacccacccacaccctgcaccctcc 57 |||||||||||||||||||| |||| Sbjct: 166587 cacccacccacaccctgcacgctcc 166563
>emb|CR974412.1| M.murinus DNA sequence from clone CH257-37C10, complete sequence Length = 250701 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 agagagagaaagagaatggca 87 ||||||||||||||||||||| Sbjct: 122217 agagagagaaagagaatggca 122197
>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11, DP09G08, DP35C12 of chromosome 5 of Podospora anserina Length = 322194 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 cagctagagagagaaagagaa 82 ||||||||||||||||||||| Sbjct: 125860 cagctagagagagaaagagaa 125840
>gb|M23548.1|BLYGEH Hordeum vulgare 1,3-beta glucan endohydrolase precursor, mRNA, complete cds Length = 1250 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaa 197 |||||||||| |||||||||||| ||| || |||||| Sbjct: 127 agtccatcggcgtgtgctacggcgtgatcggcaacaa 163
>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0614D08 Length = 147548 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 tccatcggggtgtgctacggcatga 187 |||||||| |||||||||||||||| Sbjct: 89538 tccatcggcgtgtgctacggcatga 89514
>gb|AC133477.2| Homo sapiens 3 BAC RP11-364M20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 101061 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 cagctagagagagaaagagaa 82 ||||||||||||||||||||| Sbjct: 48600 cagctagagagagaaagagaa 48620
>gb|AF030771.1|AF030771 Hordeum vulgare beta-1,3-glucanase 2 (BGL32) gene, complete cds Length = 1242 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaa 197 |||||||||| |||||||||||| ||| || |||||| Sbjct: 261 agtccatcggcgtgtgctacggcgtgatcggcaacaa 297
>gb|U72248.1|OSU72248 Oryza sativa beta-1,3-glucanase precursor (Gns2) gene, complete cds Length = 2230 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 163 tccatcggggtgtgctacggcatga 187 |||||||| |||||||||||||||| Sbjct: 1301 tccatcggcgtgtgctacggcatga 1325
>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0660F12 Length = 147203 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 163 tccatcggggtgtgctacggcatga 187 |||||||| |||||||||||||||| Sbjct: 101444 tccatcggcgtgtgctacggcatga 101420
>emb|AJ271367.1|HVU271367 Hordeum vulgare mRNA for beta-1,3-glucanase Length = 1257 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaa 197 |||||||||| |||||||||||| ||| || |||||| Sbjct: 129 agtccatcggcgtgtgctacggcgtgatcggcaacaa 165
>gb|AY612193.1| Hordeum vulgare beta-1,3-glucanase 2a mRNA, complete cds Length = 1249 Score = 42.1 bits (21), Expect = 0.95 Identities = 45/53 (84%) Strand = Plus / Plus Query: 161 agtccatcggggtgtgctacggcatgagcgccaacaatctgccggcggcgagc 213 |||||||||| |||||||||||| ||| || |||| |||||| |||||||| Sbjct: 135 agtccatcggcgtgtgctacggcgtgaacggcaacggtctgccctcggcgagc 187
>gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, complete sequence Length = 225611 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 agagagagaaagagaatggca 87 ||||||||||||||||||||| Sbjct: 72123 agagagagaaagagaatggca 72103
>ref|XM_463703.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1899 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccatcggggtgtgctacggcatg 186 |||||||| ||||||||||||||| Sbjct: 967 tccatcggcgtgtgctacggcatg 990
>gb|AC114904.7| Mus musculus chromosome 1, clone RP24-121J22, complete sequence Length = 156574 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 agagagagaaagagaatggc 86 |||||||||||||||||||| Sbjct: 151687 agagagagaaagagaatggc 151668
>emb|AJ295946.1|FPR295946 Festuca pratensis mRNA for Glu1 protein Length = 1224 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 160 gagtccatcggggtgtgctacggc 183 ||||||||||| |||||||||||| Sbjct: 134 gagtccatcggcgtgtgctacggc 157
>emb|BX663531.3| Chicken DNA sequence from clone WAG-18M1, complete sequence Length = 111106 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tggctctggcattgctcctc 129 |||||||||||||||||||| Sbjct: 83619 tggctctggcattgctcctc 83600
>gb|AC122738.10| Mus musculus chromosome 1, clone RP23-68E17, complete sequence Length = 164639 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 agagagagaaagagaatggc 86 |||||||||||||||||||| Sbjct: 56918 agagagagaaagagaatggc 56899
>gb|AC144476.11| Medicago truncatula clone mth2-10a6, complete sequence Length = 119355 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agctagagagagaaagagaa 82 |||||||||||||||||||| Sbjct: 33317 agctagagagagaaagagaa 33336
>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence Length = 128352 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agctagagagagaaagagaa 82 |||||||||||||||||||| Sbjct: 120336 agctagagagagaaagagaa 120317
>gb|AC152406.8| Medicago truncatula clone mth2-71o20, complete sequence Length = 114919 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agctagagagagaaagagaa 82 |||||||||||||||||||| Sbjct: 98749 agctagagagagaaagagaa 98768
>gb|AC146789.30| Medicago truncatula clone mth2-71h24, complete sequence Length = 127922 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agctagagagagaaagagaa 82 |||||||||||||||||||| Sbjct: 126413 agctagagagagaaagagaa 126432 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agctagagagagaaagagaa 82 |||||||||||||||||||| Sbjct: 112655 agctagagagagaaagagaa 112674
>gb|AC147431.19| Medicago truncatula clone mth2-88g17, complete sequence Length = 145905 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agctagagagagaaagagaa 82 |||||||||||||||||||| Sbjct: 13198 agctagagagagaaagagaa 13217
>emb|AL138956.17| Human DNA sequence from clone RP11-16D22 on chromosome 13 Contains the 5' end of a novel gene, complete sequence Length = 165257 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agctagagagagaaagagaa 82 |||||||||||||||||||| Sbjct: 101021 agctagagagagaaagagaa 101040
>emb|Y00449.1|DDEMR Desulfovibrio desulfuricans genes DdeM and DdeR for DdeI methylase and DdeI endonuclease Length = 2256 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 aatggcaggccaaggcgttg 100 |||||||||||||||||||| Sbjct: 2214 aatggcaggccaaggcgttg 2195
>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+ transporting ATP synthase mitochondrial F0 complex subunit g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1) pseudogene, three novel genes, the gene for a novel ENTH domain containing protein, the 5' end of the Sox30 gene for SRY-box containing gene 30 and three Cpg islands, complete sequence Length = 207877 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tagagagagaaagagaatgg 85 |||||||||||||||||||| Sbjct: 117713 tagagagagaaagagaatgg 117732
>emb|AL954247.2| Pan troglodytes chromosome 22 clone CH251-479I13 map 22q22.3, complete sequence Length = 143192 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cccacccacaccctgcaccc 54 |||||||||||||||||||| Sbjct: 41649 cccacccacaccctgcaccc 41668 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cccacccacaccctgcaccc 54 |||||||||||||||||||| Sbjct: 41505 cccacccacaccctgcaccc 41524 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 cccacccacaccctgcaccc 54 |||||||||||||||||||| Sbjct: 41295 cccacccacaccctgcaccc 41314
>gb|AC091078.7| Homo sapiens, clone RP11-164C12, complete sequence Length = 182776 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 cccacccacaccctgcaccc 54 |||||||||||||||||||| Sbjct: 11854 cccacccacaccctgcaccc 11835
>gb|AF380164.1| Rubrivivax gelatinosus Rieske protein (petA) and cytochrome b (petB) genes, complete cds; and cytochrome c1 (petC) gene, partial cds Length = 2197 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 ccgaccaggcggcgctgcag 288 |||||||||||||||||||| Sbjct: 2079 ccgaccaggcggcgctgcag 2098
>gb|AC095035.2| Homo sapiens chromosome 1 clone RP11-159J16, complete sequence Length = 173084 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 tagagagagaaagagaatgg 85 |||||||||||||||||||| Sbjct: 57770 tagagagagaaagagaatgg 57789
>gb|AC007543.4| Homo sapiens 12p12 BAC RPCI11-1018J8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 212176 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tcaacatgttcaagtccaac 240 |||||||||||||||||||| Sbjct: 87581 tcaacatgttcaagtccaac 87600
>emb|BX296521.18| Zebrafish DNA sequence from clone CH211-194E11 in linkage group 7, complete sequence Length = 185817 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 agagagagaaagagaatggc 86 |||||||||||||||||||| Sbjct: 118149 agagagagaaagagaatggc 118130
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466H10 Length = 176530 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccatcggggtgtgctacggcatg 186 |||||||| ||||||||||||||| Sbjct: 38568 tccatcggcgtgtgctacggcatg 38591
>dbj|AP004717.1| Gallus gallus genomic DNA, chromosome 5, clone:161D9, complete sequence Length = 221022 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tggctctggcattgctcctc 129 |||||||||||||||||||| Sbjct: 65499 tggctctggcattgctcctc 65518
>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence Length = 226264 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 tcacccacccacaccctgca 51 |||||||||||||||||||| Sbjct: 76571 tcacccacccacaccctgca 76590
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 tgccggcggcgagcaccgtggtca 223 ||||||||||| |||||||||||| Sbjct: 5905060 tgccggcggcgggcaccgtggtca 5905083
>dbj|AK102628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099K11, full insert sequence Length = 2144 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccatcggggtgtgctacggcatg 186 |||||||| ||||||||||||||| Sbjct: 1062 tccatcggcgtgtgctacggcatg 1085
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 tgccggcggcgagcaccgtg 219 |||||||||||||||||||| Sbjct: 437224 tgccggcggcgagcaccgtg 437243
>dbj|AK063953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F10, full insert sequence Length = 2157 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tccatcggggtgtgctacggcatg 186 |||||||| ||||||||||||||| Sbjct: 1068 tccatcggcgtgtgctacggcatg 1091
>gb|AC159011.2| Gallus gallus BAC clone CH261-107A24 from chromosome unknown, complete sequence Length = 249034 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 tggctctggcattgctcctc 129 |||||||||||||||||||| Sbjct: 146727 tggctctggcattgctcctc 146746
>emb|AL833803.8| Mouse DNA sequence from clone RP23-244H7 on chromosome 2, complete sequence Length = 226251 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 aagagaatggcaggccaagg 95 |||||||||||||||||||| Sbjct: 159708 aagagaatggcaggccaagg 159727 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,527,039 Number of Sequences: 3902068 Number of extensions: 2527039 Number of successful extensions: 133859 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 133521 Number of HSP's gapped (non-prelim): 334 length of query: 288 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 266 effective length of database: 17,147,199,772 effective search space: 4561155139352 effective search space used: 4561155139352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)