ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2k22 |
|---|---|
| Clone Library Name | barley_pub |
>ICI2_HORVU (P01053) Subtilisin-chymotrypsin inhibitor-2A (CI-2A)| Length = 83 Score = 76.6 bits (187), Expect = 3e-14 Identities = 37/73 (50%), Positives = 53/73 (72%), Gaps = 3/73 (4%) Frame = +1 Query: 49 SSSDDSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV 228 + + D K WPELVG S+EEAKK+I++D+P+ +II V PVGT VT + R DRVR+FV Sbjct: 12 TGAGDRHNLKTEWPELVGKSVEEAKKVILQDKPEAQII-VLPVGTIVTMEYRIDRVRLFV 70 Query: 229 ---NTVAEIPRIG 258 + +A++PR+G Sbjct: 71 DKLDNIAQVPRVG 83
>ICIW_WHEAT (P82977) Subtilisin-chymotrypsin inhibitor WSCI| Length = 72 Score = 74.7 bits (182), Expect = 1e-13 Identities = 35/73 (47%), Positives = 54/73 (73%), Gaps = 3/73 (4%) Frame = +1 Query: 49 SSSDDSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV 228 + + D +K WPELVG S+EEAKK+I++D+ + +I+ V PVGT VT + R DRVR+FV Sbjct: 1 TDTGDHHNQKTEWPELVGKSVEEAKKVILQDKSEAQIV-VLPVGTIVTMEYRIDRVRLFV 59 Query: 229 NT---VAEIPRIG 258 ++ +A++PR+G Sbjct: 60 DSLDKIAQVPRVG 72
>ICI3_HORVU (P08626) Subtilisin-chymotrypsin inhibitor-2B (CI-2B) (Fragment)| Length = 72 Score = 74.3 bits (181), Expect = 1e-13 Identities = 36/69 (52%), Positives = 51/69 (73%), Gaps = 3/69 (4%) Frame = +1 Query: 61 DSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV---N 231 D +K WPELV S+EEAKK+I++D+P+ +II V PVGT VT + R DRVR+FV + Sbjct: 5 DCQNQKTEWPELVEKSVEEAKKVILQDKPEAQII-VLPVGTIVTMEYRIDRVRLFVDRLD 63 Query: 232 TVAEIPRIG 258 +A++PR+G Sbjct: 64 NIAQVPRVG 72
>ICI1_LYCPE (P16231) Wound-induced proteinase inhibitor 1 precursor| (Wound-induced proteinase inhibitor I) Length = 111 Score = 60.5 bits (145), Expect = 2e-09 Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 3/70 (4%) Frame = +1 Query: 55 SDDSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN- 231 SD C K WPEL+G+ AK II K+ P + I + G+ VT+D R DRVR+FVN Sbjct: 41 SDSRCKGKQFWPELIGVPALYAKGIIEKENPSITNIPILLNGSPVTKDFRCDRVRLFVNI 100 Query: 232 --TVAEIPRI 255 V +IPR+ Sbjct: 101 LGDVVQIPRV 110
>ICI_LUMTE (P83472) Chymotrypsin inhibitor precursor (LTCI)| Length = 86 Score = 59.3 bits (142), Expect = 5e-09 Identities = 36/69 (52%), Positives = 43/69 (62%), Gaps = 3/69 (4%) Frame = +1 Query: 61 DSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN--- 231 D K SWPELVG ++EEAK I++DRPD +I+V P + VT D R RV IFVN Sbjct: 19 DISAVKTSWPELVGETLEEAKAQILEDRPDA-VIKVQPEHSPVTYDYRPSRVIIFVNKDG 77 Query: 232 TVAEIPRIG 258 VAE P G Sbjct: 78 NVAETPAAG 86
>ICIC_HORVU (P01054) Subtilisin-chymotrypsin inhibitor CI-1C| Length = 77 Score = 59.3 bits (142), Expect = 5e-09 Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 5/68 (7%) Frame = +1 Query: 70 GKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV-----NT 234 G K SWPE+VGMS E+AK+II++D+P+ + IEV PV V L F+ R+FV T Sbjct: 13 GAKTSWPEVVGMSAEKAKEIILRDKPNAQ-IEVIPVDAMV--PLNFNPNRVFVLVHKATT 69 Query: 235 VAEIPRIG 258 VA++ R+G Sbjct: 70 VAZVSRVG 77
>ICIB_HORVU (P16063) Subtilisin-chymotrypsin inhibitor CI-1B| Length = 83 Score = 58.9 bits (141), Expect = 6e-09 Identities = 32/63 (50%), Positives = 42/63 (66%) Frame = +1 Query: 70 GKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNTVAEIP 249 G K SWPE+VGMS E+AK+II++D+PD + IEV PV V D +R+ I V VA P Sbjct: 23 GAKRSWPEVVGMSAEKAKEIILRDKPDAQ-IEVIPVDAMVPLDFNPNRIFILV-AVARTP 80 Query: 250 RIG 258 +G Sbjct: 81 TVG 83
>IER1_LYCES (P20076) Ethylene-responsive proteinase inhibitor 1 precursor| (Ethylene-responsive proteinase inhibitor I) Length = 119 Score = 58.9 bits (141), Expect = 6e-09 Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 3/64 (4%) Frame = +1 Query: 76 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN---TVAEI 246 K SWPEL+G + AK+II K+ P + +E G+A TEDLR +RVR+FVN V + Sbjct: 56 KESWPELLGTPAKFAKQIIQKENPKLTNVETLLNGSAFTEDLRCNRVRLFVNLLDIVVQT 115 Query: 247 PRIG 258 P++G Sbjct: 116 PKVG 119
>ITH5_CUCMA (P19873) Inhibitor of trypsin and hageman factor (CMTI-V)| Length = 68 Score = 57.0 bits (136), Expect = 2e-08 Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 3/68 (4%) Frame = +1 Query: 64 SCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN---T 234 SC K+SWP LVG+ AK II + P+VK + + GT VT+D R +RVRI+VN Sbjct: 2 SCPGKSSWPHLVGVGGSVAKAIIERQNPNVKAV-ILEEGTPVTKDFRCNRVRIWVNKRGL 60 Query: 235 VAEIPRIG 258 V PRIG Sbjct: 61 VVSPPRIG 68
>ITR1_NICSY (Q02214) Trypsin inhibitor 1 precursor (Trypsin inhibitor I)| (NSTI-I) Length = 94 Score = 55.1 bits (131), Expect = 9e-08 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 5/74 (6%) Frame = +1 Query: 52 SSDDSC--GKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIF 225 ++ SC KK +WPEL+G+ + A++II K+ + + G+ VT+D R +RVR+F Sbjct: 21 TAQSSCPGNKKETWPELIGVPAKFAREIIQKENSKLTNVPSVLNGSPVTKDFRCERVRLF 80 Query: 226 VNT---VAEIPRIG 258 VN V +IPR+G Sbjct: 81 VNVLDFVVQIPRVG 94
>ICIA_HORVU (P16062) Subtilisin-chymotrypsin inhibitor CI-1A| Length = 83 Score = 55.1 bits (131), Expect = 9e-08 Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%) Frame = +1 Query: 76 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV-NTVAEIPR 252 K SWPE+VGMS E+AK+II++D+P+ + +EV PV V L FD R+FV VA P Sbjct: 25 KTSWPEVVGMSAEKAKEIILRDKPNAQ-VEVIPVDAMV--HLNFDPNRVFVLVAVARTPT 81 Query: 253 IG 258 +G Sbjct: 82 VG 83
>IPIB_TOBAC (Q03199) Proteinase inhibitor I-B precursor (PI-IB) (Inhibitor of| microbial serine proteinases major isoform) Length = 107 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%) Frame = +1 Query: 76 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNT---VAEI 246 K WPEL+G + A +II K+ P + ++ GT VTEDLR +RVR+FVN V + Sbjct: 44 KERWPELLGTPAKFAMQIIQKENPKLTNVQTVLNGTPVTEDLRCNRVRLFVNVLDFVVQT 103 Query: 247 PRIG 258 P++G Sbjct: 104 PQVG 107
>IPIA_TOBAC (Q03198) Proteinase inhibitor I-A precursor (PI-IA) (Inhibitor of| microbial serine proteinases minor isoform) Length = 107 Score = 52.4 bits (124), Expect = 6e-07 Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%) Frame = +1 Query: 76 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNT---VAEI 246 K WPEL+G + A +II K+ P + ++ G VTEDLR +RVR+FVN + + Sbjct: 44 KERWPELLGTPAKFAMQIIQKENPKLTNVQTILNGGPVTEDLRCNRVRLFVNVLDFIVQT 103 Query: 247 PRIG 258 P+IG Sbjct: 104 PQIG 107
>BGIA_MOMCH (P24076) Glu S.griseus protease inhibitor (BGIA)| Length = 68 Score = 50.8 bits (120), Expect = 2e-06 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Frame = +1 Query: 67 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV---NTV 237 C K SWP+LVG + AK +I ++ P V+ + + VG+ VT D R DRVR++V V Sbjct: 3 CQGKRSWPQLVGSTGAAAKAVIERENPRVRAV-IVRVGSPVTADFRCDRVRVWVTERGIV 61 Query: 238 AEIPRIG 258 A P IG Sbjct: 62 ARPPAIG 68
>ICI1_CANLI (P81712) Subtilisin inhibitor CLSI-I| Length = 65 Score = 50.4 bits (119), Expect = 2e-06 Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 3/65 (4%) Frame = +1 Query: 73 KKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV---NTVAE 243 +K SWPELVG++ EEA+KI K+ I+V P G+ VT D + RVR++V N V Sbjct: 3 RKTSWPELVGVTAEEAEKI--KEEMSGVEIQVVPPGSFVTADYKPQRVRLYVDESNKVTR 60 Query: 244 IPRIG 258 P IG Sbjct: 61 TPGIG 65
>ICI1_SOLTU (Q00783) Proteinase inhibitor 1 precursor (Proteinase inhibitor I)| Length = 107 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Frame = +1 Query: 67 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNT---V 237 C K WPEL+G+ + AK II K+ + + + G+ VT D+R DRVR+F N V Sbjct: 41 CKGKLRWPELIGVPTKLAKGIIEKENSLISNVHILLNGSPVTLDIRCDRVRLFDNILGYV 100 Query: 238 AEIPRIG 258 +IP +G Sbjct: 101 VDIPVVG 107
>ICIS_VICFA (P08820) Subtilisin inhibitor (Fragment)| Length = 62 Score = 50.1 bits (118), Expect = 3e-06 Identities = 26/59 (44%), Positives = 41/59 (69%) Frame = +1 Query: 76 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNTVAEIPR 252 + SWPELVG+S EEA+K I ++ P+ + I+V P + VT D +F RVR++V+ ++ R Sbjct: 1 RTSWPELVGVSAEEARK-IKEEMPEAE-IQVVPQDSFVTADYKFQRVRLYVDESNKVVR 57
>ICIA_SOLTU (P01052) Chymotrypsin inhibitor I, A, B and C subunits| Length = 71 Score = 49.7 bits (117), Expect = 4e-06 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Frame = +1 Query: 67 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIF---VNTV 237 C K WPEL+G+ + AK+II K + + + G+ VT D R +RVR+F + +V Sbjct: 5 CDGKLQWPELIGVPTKLAKEIIEKQNSLISNVHILLNGSPVTMDFRCNRVRLFDDILGSV 64 Query: 238 AEIPRI 255 +IPR+ Sbjct: 65 VQIPRV 70
>ICID_SOLTU (P08454) Wound-induced proteinase inhibitor 1 precursor| (Wound-induced proteinase inhibitor I) (Chymotrypsin inhibitor I, D subunit) Length = 107 Score = 49.3 bits (116), Expect = 5e-06 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Frame = +1 Query: 67 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN---TV 237 C K WPEL+G+ + AK II K+ + +++ G+ VT D R +RVR+F N V Sbjct: 41 CNGKQRWPELIGVPTKLAKGIIEKENSLITNVQILLNGSPVTMDYRCNRVRLFDNILGDV 100 Query: 238 AEIPRI 255 +IPR+ Sbjct: 101 VQIPRV 106
>ICI1_LYCES (P05118) Wound-induced proteinase inhibitor 1 precursor| (Wound-induced proteinase inhibitor I) Length = 111 Score = 48.5 bits (114), Expect = 8e-06 Identities = 23/55 (41%), Positives = 33/55 (60%) Frame = +1 Query: 67 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN 231 C K WPEL+G+ + AK+II K+ P + I + G+ +T D DRVR+F N Sbjct: 45 CEGKQMWPELIGVPTKLAKEIIEKENPSITNIPILLSGSPITLDYLCDRVRLFDN 99
>ICI1_PHAAN (P16064) Subtilisin inhibitor 1 (Subtilisin inhibitor I) (ASI-I)| [Contains: Subtilisin inhibitor 2 (Subtilisin inhibitor II) (ASI-II)] Length = 92 Score = 46.2 bits (108), Expect = 4e-05 Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 3/64 (4%) Frame = +1 Query: 76 KASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFV---NTVAEI 246 K SWPELVG++ E+A+ I ++ DV+ I+V P + VT D RVR++V N V Sbjct: 30 KTSWPELVGVTAEQAETKIKEEMVDVQ-IQVSPHDSFVTADYNPKRVRLYVDESNKVTRT 88 Query: 247 PRIG 258 P IG Sbjct: 89 PSIG 92
>ICIC_HIRME (P01051) Eglin C| Length = 70 Score = 43.1 bits (100), Expect = 3e-04 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 4/63 (6%) Frame = +1 Query: 82 SWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIF----VNTVAEIP 249 S+PE+VG ++++A++ P + P G+ VT DLR++RVR+F N V +P Sbjct: 9 SFPEVVGKTVDQAREYFTLHYPQYDVY-FLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVP 67 Query: 250 RIG 258 +G Sbjct: 68 HVG 70
>ICI_LINUS (P82381) Proteinase inhibitor (LUTI)| Length = 69 Score = 42.7 bits (99), Expect = 5e-04 Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +1 Query: 67 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVN---TV 237 C K +WPELVG S A + ++ +V I V G+A+T+D R DRV + VN V Sbjct: 4 CPGKNAWPELVGKSGNMAAATVERENRNVHAI-VLKEGSAMTKDFRCDRVWVIVNDHGVV 62 Query: 238 AEIPRI 255 +P I Sbjct: 63 TSVPHI 68
>ATSI_AMACA (P80211) Trypsin/subtilisin inhibitor (ATSI)| Length = 69 Score = 38.1 bits (87), Expect = 0.011 Identities = 23/62 (37%), Positives = 34/62 (54%) Frame = +1 Query: 67 CGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVRIFVNTVAEI 246 C K WPELVG +A II ++ P+V+ I V + T+D R DRV + V++ + Sbjct: 4 CPGKQEWPELVGEYGYKAAAIIERENPNVRSI-VKHERSGFTKDFRCDRVWVVVDSTGVV 62 Query: 247 PR 252 R Sbjct: 63 VR 64
>ICI_EISHO (P83830) Chymotrypsin inhibitor (EHCI) (Fragment)| Length = 41 Score = 36.6 bits (83), Expect = 0.033 Identities = 14/30 (46%), Positives = 23/30 (76%) Frame = +1 Query: 73 KKASWPELVGMSIEEAKKIIMKDRPDVKII 162 +KA+WPELVG + EEA+ I+ D+P+ ++ Sbjct: 6 EKAAWPELVGKTPEEARAQILLDKPNANVV 35
>YPEC_SHIFL (P64544) Hypothetical protein ypeC precursor| Length = 108 Score = 32.7 bits (73), Expect = 0.47 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 96 GWDVHRGGEEDHHEGQARREDHRGLPSRHRGHR 194 GWD + E + EG R+DHRG R GHR Sbjct: 76 GWDKRKAYERGYREGWRDRDDHRG-KGRGHGHR 107
>YPEC_ECOLI (P64542) Hypothetical protein ypeC precursor| Length = 108 Score = 32.7 bits (73), Expect = 0.47 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 96 GWDVHRGGEEDHHEGQARREDHRGLPSRHRGHR 194 GWD + E + EG R+DHRG R GHR Sbjct: 76 GWDKRKAYERGYREGWRDRDDHRG-KGRGHGHR 107
>YPEC_ECO57 (P64543) Hypothetical protein ypeC precursor| Length = 108 Score = 32.7 bits (73), Expect = 0.47 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 96 GWDVHRGGEEDHHEGQARREDHRGLPSRHRGHR 194 GWD + E + EG R+DHRG R GHR Sbjct: 76 GWDKRKAYERGYREGWRDRDDHRG-KGRGHGHR 107
>NEF_HV2SB (P12447) Nef protein (Negative factor) (F-protein) (3'ORF)| Length = 255 Score = 32.0 bits (71), Expect = 0.81 Identities = 16/41 (39%), Positives = 18/41 (43%) Frame = +3 Query: 33 NRYENELLGRLLRQEGVMAGAGWDVHRGGEEDHHEGQARRE 155 +R L RLLR G G WD GG HEG R + Sbjct: 9 SRPSRGLQERLLRARGGACGGLWDESEGGYSQFHEGSGREQ 49
>PAX8_RAT (P51974) Paired box protein Pax-8| Length = 458 Score = 31.6 bits (70), Expect = 1.1 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 11/75 (14%) Frame = +3 Query: 42 ENELLGRLLRQEGVM--AGAGWDVHRGGEEDHHEGQAR----REDHRGLPSRHR-----G 188 +++ LG G++ A AG D HRG +D +GQ R + P +H G Sbjct: 172 QSDSLGSTYSIHGLLGIAQAGSDTHRGRCDDSDQGQCRLSIDSQSSSSGPRKHLRTDTFG 231 Query: 189 HRGLEVRPCPHLRQH 233 LE CP RQH Sbjct: 232 QHHLEPLECPFERQH 246
>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)| Length = 1002 Score = 30.8 bits (68), Expect = 1.8 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = +3 Query: 96 GWDVHRGGEE-DHHEGQARREDHRGLPSR--HRGHRGLEVRPCPHLRQHSCG 242 G + HRG E+ +HH+G +E H+G + H+G + E P ++H G Sbjct: 352 GPEHHRGPEDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKGPKDKEHHKG 403
>PRM2_MACNE (P35298) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 103 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = +3 Query: 108 HRGGEEDHHEGQARREDHRGLPSRHRGHRGLEVRPCPHLRQHSCG 242 HRG +RR HR RHR R R C H R+H G Sbjct: 48 HRGHSHHRRRRCSRRRLHRIHRRRHRSCRRRRRRSCRHRRRHRRG 92
>PRM2_MACFU (P61253) Protamine-2 (Protamine-P2) (Sperm histone P2)| Length = 103 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = +3 Query: 108 HRGGEEDHHEGQARREDHRGLPSRHRGHRGLEVRPCPHLRQHSCG 242 HRG +RR HR RHR R R C H R+H G Sbjct: 48 HRGHSHHRRRRCSRRRLHRIHRRRHRSCRRRRRRSCRHRRRHRRG 92
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (MHC class I region proline-rich protein CAT53) Length = 940 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 8/48 (16%) Frame = +3 Query: 78 GVMAGAGWD-VHRG-------GEEDHHEGQARREDHRGLPSRHRGHRG 197 G M G+G H G G H R DHRG P HRGH G Sbjct: 838 GSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPHEHRGHDG 885
>PSB1_TRYBB (Q9U794) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome beta 6 subunit) Length = 258 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = +3 Query: 126 DHHEGQARREDHRGLPSRHRGHRGLEVRPCPHLRQHSCGDPPHW 257 +HH G+A H G P + G V P LRQ + G P HW Sbjct: 7 EHHVGEANTLQHHGYPRK----LGNSVLTLP-LRQGAKGHPQHW 45
>VL2_HPV53 (P36764) Minor capsid protein L2| Length = 463 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -3 Query: 182 VPTGKTSMIFTSGLSFMMIFFASSMDIPTSSGHDAFLP 69 +PT + F+ S + I F +S D+P SG D LP Sbjct: 372 LPTNTVPLSFSGSTSNVTIPFGTSWDVPIYSGPDVVLP 409
>YGJK_CAEEL (Q9XUC4) Hypothetical protein T28F3.3 in chromosome IV| Length = 393 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/41 (26%), Positives = 18/41 (43%) Frame = +3 Query: 81 VMAGAGWDVHRGGEEDHHEGQARREDHRGLPSRHRGHRGLE 203 ++ GW+ H DHHE D + + H HR ++ Sbjct: 34 ILTKVGWNDHSEELHDHHEHDHDHHDEQLIRKNHTSHREIQ 74
>GPA8_DICDI (P34046) Guanine nucleotide-binding protein alpha-8 subunit (G| alpha-8) Length = 403 Score = 29.3 bits (64), Expect = 5.2 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +1 Query: 76 KASWPELVGMSIEEAKKIIMKDRPDVK 156 K +W E G+ +EE KK++MK D+K Sbjct: 331 KYTWEEAKGILLEENKKVLMKATKDLK 357
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/49 (28%), Positives = 15/49 (30%) Frame = +3 Query: 108 HRGGEEDHHEGQARREDHRGLPSRHRGHRGLEVRPCPHLRQHSCGDPPH 254 H E+HHE H H H PH H PPH Sbjct: 62 HHHHPEEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPH 110
>DPO3A_ECOLI (P10443) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1160 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/58 (29%), Positives = 26/58 (44%) Frame = +1 Query: 46 MSSSDDSCGKKASWPELVGMSIEEAKKIIMKDRPDVKIIEVFPVGTAVTEDLRFDRVR 219 M S ++ C A PE + ++E AK+ + R + FP G TED R + Sbjct: 240 MRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDYLVKRAK 297
>CART1_RAT (Q63087) Cartilage homeoprotein 1 (CART-1)| Length = 326 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +1 Query: 10 PESAWFSSTGTRMSSSDDSCGKKASWPELVGMSIEEAKKIIMKDR-PDVKIIEVFPVGTA 186 PE + G + S+ S K+ + +EE +K+ K PDV + E + T Sbjct: 111 PEKSELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTE 170 Query: 187 VTE 195 +TE Sbjct: 171 LTE 173
>CART1_MOUSE (Q8C8B0) Cartilage homeoprotein 1 (CART-1)| Length = 326 Score = 28.9 bits (63), Expect = 6.8 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Frame = +1 Query: 10 PESAWFSSTGTRMSSSDDSCGKKASWPELVGMSIEEAKKIIMKDR-PDVKIIEVFPVGTA 186 PE + G + S+ S K+ + +EE +K+ K PDV + E + T Sbjct: 111 PEKSELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTE 170 Query: 187 VTE 195 +TE Sbjct: 171 LTE 173
>V143_NPVOP (Q83950) ATP-dependent DNA helicase P143 (EC 3.6.1.-)| Length = 1223 Score = 28.9 bits (63), Expect = 6.8 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%) Frame = -3 Query: 233 VLTKMRTRSNLKSSVTAVPTG----KTSMIFTSGLSFMMIFFASSMDIPTSSGHDA-FLP 69 +L+KM ++ + +T V G K F S+M++ FA+S+ +PT G A +LP Sbjct: 859 ILSKMDVQNYPVAYLTQVVEGYLYFKRYTNFNHASSYMLMHFAASLSVPTDYGRKAVYLP 918
>DEOC_BACHD (Q9KD67) Deoxyribose-phosphate aldolase (EC 4.1.2.4)| (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) Length = 224 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = +1 Query: 130 IMKDRPDVKIIEV--FPVGTAVTEDLRFDRVRIFVNTVAEIPRI 255 ++KD PDVK+ V FP+G E F+ N E+ + Sbjct: 51 LLKDAPDVKVCTVIGFPLGATTPEVKAFETTNAIENGATEVDMV 94
>GLB_PSEDC (P26914) Extracellular globin precursor| Length = 333 Score = 28.5 bits (62), Expect = 8.9 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +3 Query: 102 DVHRGGEEDHHEGQARREDH 161 D H E+DHHEG+ + E H Sbjct: 314 DKHAKAEKDHHEGEHKEEHH 333
>ATG3_CANAL (Q5ABQ7) Autophagy-related protein 3 (Autophagy-related E2-like| conjugation enzyme ATG3) Length = 333 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/49 (28%), Positives = 28/49 (57%) Frame = -2 Query: 294 THVNRIEQEAKLANAGDLRNCVDEDADTVEPQVLGDRGADWEDLDDLHV 148 TH ++I + ++ D+ + +DE+A+ E +GD D ++ DDL + Sbjct: 123 THDSQINKGEEI---NDIDDFIDENAEEQEHDQIGDHELDDDEFDDLDI 168 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,385,014 Number of Sequences: 219361 Number of extensions: 1109545 Number of successful extensions: 3563 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 3409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3539 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
