ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2j21 |
|---|---|
| Clone Library Name | barley_pub |
>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2365 Score = 33.1 bits (74), Expect = 0.60 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 8/97 (8%) Frame = -1 Query: 455 NPNTKSIARDNTRPARST----ASLFNP----CRRGRPSPTPPANSVXXXXXXXXXXXRS 300 NP T RDN R +R++ A+ NP +R P + P+ + + Sbjct: 450 NPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDN 509 Query: 299 IPAMRRSGRRTTPASTNRATCAEESGPRPIGPYASRR 189 A R S R +CA+ PR P + R Sbjct: 510 PRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRAAR 546 Score = 32.0 bits (71), Expect = 1.3 Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 8/97 (8%) Frame = -1 Query: 455 NPNTKSIARDNTRPARST----ASLFNP----CRRGRPSPTPPANSVXXXXXXXXXXXRS 300 NP T RDN R +R++ A+ NP +R P + P + + Sbjct: 499 NPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRAARDNPTTSCAQRDN 558 Query: 299 IPAMRRSGRRTTPASTNRATCAEESGPRPIGPYASRR 189 A R S R +CA+ PR P + R Sbjct: 559 PRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRATR 595
>B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 31.2 bits (69), Expect = 2.3 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +1 Query: 13 SASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEAVRPLLSGAP 141 +A R S Q+ V+ A S GGD GG A RPL P Sbjct: 182 AAPRASKGAQTGTLVEEMVAVASATAGGDDGGAAGRPLTKAQP 224
>AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)| (AKAP 95) Length = 698 Score = 31.2 bits (69), Expect = 2.3 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +1 Query: 7 PISASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEA 114 P+ + +HSP S V+ T + PE GD EA Sbjct: 609 PVDTAEATHSPHSEQLVEVETPCGAAPEKGDANAEA 644
>B3A2_RAT (P23347) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1234 Score = 31.2 bits (69), Expect = 2.3 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +1 Query: 13 SASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEAVRPLLSGAP 141 +A R S Q+ V+ A S GGD GG A RPL P Sbjct: 183 AAPRASKGAQTGTLVEEMVAVASGTAGGDDGGAAGRPLTKAQP 225
>FGF2_CAVPO (Q60487) Heparin-binding growth factor 2 (HBGF-2) (Fibroblast| growth factor 2) (FGF-2) (Basic fibroblast growth factor) (BFGF) (Prostatropin) (Prostatic growth factor) (Fragments) Length = 170 Score = 30.4 bits (67), Expect = 3.9 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +1 Query: 13 SASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEA 114 +A+ P MA + T P+ PEGGDGG A Sbjct: 10 TAAAARREPGGAMAAGSITTLPALPEGGDGGAFA 43
>BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain protein 1A| (ATP-utilizing chromatin assembly and remodeling factor 1) (hACF1) (ATP-dependent chromatin remodelling protein) (Williams syndrome transcription factor-related chromatin remodeli Length = 1556 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Frame = -3 Query: 324 EVVGDDQEHPCDE----TEREEDDAGEH*PCHLRRRKRPTAHRPVRIPARI 184 EV GD++E +E E++EDD+ E L +R RP PV+ ++ Sbjct: 1228 EVDGDEEEGQSEEEEYEVEQDEDDSQEEEEVSLPKRGRPQVRLPVKTRGKL 1278
>ZEP2_HUMAN (P31629) Human immunodeficiency virus type I enhancer-binding protein| 2 (HIV-EP2) (MHC-binding protein 2) (MBP-2) Length = 2446 Score = 30.0 bits (66), Expect = 5.1 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Frame = -3 Query: 369 SLSHSAREQRAHTAHEVVGDDQEHPCDETEREE--DDAGEH*PCHLRRRKRPTAHRPVR- 199 S+S + + + A E G+D + D+ E E+ DD G+ P + R R T+ +P R Sbjct: 1887 SMSSISTDHQFSDAEESDGEDGDDNDDDDEDEDDFDDQGDLTP---KTRSRSTSPQPPRF 1943 Query: 198 --IPARIGRVP 172 +P +G VP Sbjct: 1944 SSLPVNVGAVP 1954
>YNIF_AZOBR (P25316) Hypothetical 12.3 kDa protein in nifK-nifY intergenic| region Length = 118 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2 Query: 415 QHAARPPSSIPVGGDVPLPLRPRTACTHGTRGSRR 311 +HAA P S + G++P P PR+ + RGS R Sbjct: 22 RHAAEQPGSGGIAGNLPAPSSPRSFRSWRRRGSSR 56
>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22| Length = 907 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +1 Query: 13 SASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEAVRP 123 S +++H P+SP D A P + G GGG+ RP Sbjct: 56 SPRQIAHHPRSPRGSD-RRAEPRRRDAGGGGGDKYRP 91
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 29.3 bits (64), Expect = 8.7 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1 Query: 70 AAPSHPEGGDGGGEAVRPLLSGAPAXXXXXXLDIRYAPY-ARRDAYGPMGRGPLSS 234 A P P G GGG+A PLLS P L+++ A +YGP G + S Sbjct: 1981 AVPESP--GVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDS 2034 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,775,302 Number of Sequences: 219361 Number of extensions: 1421496 Number of successful extensions: 4852 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4552 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4831 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
