ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2j21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Ta... 33 0.60
2B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band... 31 2.3
3AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor ... 31 2.3
4B3A2_RAT (P23347) Anion exchange protein 2 (Non-erythroid band 3... 31 2.3
5FGF2_CAVPO (Q60487) Heparin-binding growth factor 2 (HBGF-2) (Fi... 30 3.9
6BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain ... 30 3.9
7ZEP2_HUMAN (P31629) Human immunodeficiency virus type I enhancer... 30 5.1
8YNIF_AZOBR (P25316) Hypothetical 12.3 kDa protein in nifK-nifY i... 30 6.7
9CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22 30 6.7
10MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia p... 29 8.7

>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
           (Trio-associated repeat on actin)
          Length = 2365

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 8/97 (8%)
 Frame = -1

Query: 455 NPNTKSIARDNTRPARST----ASLFNP----CRRGRPSPTPPANSVXXXXXXXXXXXRS 300
           NP T    RDN R +R++    A+  NP     +R  P  + P+ +             +
Sbjct: 450 NPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDN 509

Query: 299 IPAMRRSGRRTTPASTNRATCAEESGPRPIGPYASRR 189
             A R S          R +CA+   PR   P  + R
Sbjct: 510 PRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRAAR 546



 Score = 32.0 bits (71), Expect = 1.3
 Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 8/97 (8%)
 Frame = -1

Query: 455 NPNTKSIARDNTRPARST----ASLFNP----CRRGRPSPTPPANSVXXXXXXXXXXXRS 300
           NP T    RDN R +R++    A+  NP     +R  P  + P  +             +
Sbjct: 499 NPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRAARDNPTTSCAQRDN 558

Query: 299 IPAMRRSGRRTTPASTNRATCAEESGPRPIGPYASRR 189
             A R S          R +CA+   PR   P  + R
Sbjct: 559 PRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRATR 595



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>B3A2_MOUSE (P13808) Anion exchange protein 2 (Non-erythroid band 3-like|
           protein) (AE2 anion exchanger) (Solute carrier family 4
           member 2) (B3RP)
          Length = 1237

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 13  SASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEAVRPLLSGAP 141
           +A R S   Q+   V+   A  S   GGD GG A RPL    P
Sbjct: 182 AAPRASKGAQTGTLVEEMVAVASATAGGDDGGAAGRPLTKAQP 224



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>AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)|
           (AKAP 95)
          Length = 698

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 7   PISASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEA 114
           P+  +  +HSP S   V+  T   + PE GD   EA
Sbjct: 609 PVDTAEATHSPHSEQLVEVETPCGAAPEKGDANAEA 644



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>B3A2_RAT (P23347) Anion exchange protein 2 (Non-erythroid band 3-like|
           protein) (AE2 anion exchanger) (Solute carrier family 4
           member 2) (B3RP)
          Length = 1234

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 13  SASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEAVRPLLSGAP 141
           +A R S   Q+   V+   A  S   GGD GG A RPL    P
Sbjct: 183 AAPRASKGAQTGTLVEEMVAVASGTAGGDDGGAAGRPLTKAQP 225



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>FGF2_CAVPO (Q60487) Heparin-binding growth factor 2 (HBGF-2) (Fibroblast|
           growth factor 2) (FGF-2) (Basic fibroblast growth
           factor) (BFGF) (Prostatropin) (Prostatic growth factor)
           (Fragments)
          Length = 170

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 13  SASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEA 114
           +A+     P   MA  + T  P+ PEGGDGG  A
Sbjct: 10  TAAAARREPGGAMAAGSITTLPALPEGGDGGAFA 43



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>BAZ1A_HUMAN (Q9NRL2) Bromodomain adjacent to zinc finger domain protein 1A|
            (ATP-utilizing chromatin assembly and remodeling factor
            1) (hACF1) (ATP-dependent chromatin remodelling protein)
            (Williams syndrome transcription factor-related chromatin
            remodeli
          Length = 1556

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -3

Query: 324  EVVGDDQEHPCDE----TEREEDDAGEH*PCHLRRRKRPTAHRPVRIPARI 184
            EV GD++E   +E     E++EDD+ E     L +R RP    PV+   ++
Sbjct: 1228 EVDGDEEEGQSEEEEYEVEQDEDDSQEEEEVSLPKRGRPQVRLPVKTRGKL 1278



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>ZEP2_HUMAN (P31629) Human immunodeficiency virus type I enhancer-binding protein|
            2 (HIV-EP2) (MHC-binding protein 2) (MBP-2)
          Length = 2446

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = -3

Query: 369  SLSHSAREQRAHTAHEVVGDDQEHPCDETEREE--DDAGEH*PCHLRRRKRPTAHRPVR- 199
            S+S  + + +   A E  G+D +   D+ E E+  DD G+  P   + R R T+ +P R 
Sbjct: 1887 SMSSISTDHQFSDAEESDGEDGDDNDDDDEDEDDFDDQGDLTP---KTRSRSTSPQPPRF 1943

Query: 198  --IPARIGRVP 172
              +P  +G VP
Sbjct: 1944 SSLPVNVGAVP 1954



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>YNIF_AZOBR (P25316) Hypothetical 12.3 kDa protein in nifK-nifY intergenic|
           region
          Length = 118

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 415 QHAARPPSSIPVGGDVPLPLRPRTACTHGTRGSRR 311
           +HAA  P S  + G++P P  PR+  +   RGS R
Sbjct: 22  RHAAEQPGSGGIAGNLPAPSSPRSFRSWRRRGSSR 56



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>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22|
          Length = 907

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 13  SASRLSHSPQSPMAVDTTTAAPSHPEGGDGGGEAVRP 123
           S  +++H P+SP   D   A P   + G GGG+  RP
Sbjct: 56  SPRQIAHHPRSPRGSD-RRAEPRRRDAGGGGGDKYRP 91



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>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +1

Query: 70   AAPSHPEGGDGGGEAVRPLLSGAPAXXXXXXLDIRYAPY-ARRDAYGPMGRGPLSS 234
            A P  P  G GGG+A  PLLS  P       L+++     A   +YGP   G + S
Sbjct: 1981 AVPESP--GVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDS 2034


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,775,302
Number of Sequences: 219361
Number of extensions: 1421496
Number of successful extensions: 4852
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4831
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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