ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2j14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B) 34 0.44
2VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A) 34 0.44
3MST2_DROHY (Q08696) Axoneme-associated protein mst101(2) 33 0.98
4TICN1_MOUSE (Q62288) Testican-1 precursor (SPOCK protein) 31 2.8
5TICN1_HUMAN (Q08629) Testican-1 precursor (SPOCK protein) 31 3.7
6MACA1_RHOOP (O84992) Maleylacetate reductase 1 (EC 1.3.1.32) (Ma... 30 6.3
7VNCS_PAVPN (P18547) Noncapsid protein NS-1 (Nonstructural protei... 30 8.3
8PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakar... 30 8.3

>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)|
          Length = 588

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
 Frame = +1

Query: 169 RPVDDQGN-DSCDIKCQHHKVPARKKQCVDECHSREHHHPSRAS-----CERKCSHWRD- 327
           RP D Q   + C  +C+  +   ++ QC   C  R      ++      C++ C      
Sbjct: 79  RPEDPQRRYEECQQECRQQE-ERQRPQCQQRCLKRFEQEQQQSQRQFQECQQHCHQQEQR 137

Query: 328 PARKEQCVQQCM-RYGLNLXXXXXXXXIERPHAEEVEVDDQRD 453
           P RK+QCV++C  RY  N          E    EE E +   +
Sbjct: 138 PERKQQCVRECRERYQENPWRREREEEAEEEETEEGEQEQSHN 180



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>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)|
          Length = 605

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +1

Query: 181 DQGNDSCDIKCQ-HHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKE 342
           D+    C  +CQ   + P RK+QCV EC  +    P +   E K   WR+   +E
Sbjct: 119 DKQFKECQQRCQWQEQRPERKQQCVKECREQYQEDPWKGERENK---WREEEEEE 170



 Score = 32.0 bits (71), Expect = 1.7
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = +1

Query: 199 CDIKCQHHKVPAR---KKQCVDECHSREHHHPSRA--SCERKCSHWRD--PARKEQCVQQ 357
           C   CQ  +   R   ++ C ++   ++   P +    C+++C  W++  P RK+QCV++
Sbjct: 87  CRQHCQQEERRLRPHCEQSCREQYEKQQQQQPDKQFKECQQRCQ-WQEQRPERKQQCVKE 145

Query: 358 C 360
           C
Sbjct: 146 C 146



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>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 32.7 bits (73), Expect = 0.98
 Identities = 15/56 (26%), Positives = 28/56 (50%)
 Frame = +1

Query: 199  CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMR 366
            C+ + +  K  A KKQC +E   +E     +  CE +    ++ A K+QC ++  +
Sbjct: 1064 CEERAKKLKEAAEKKQC-EERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEERAKK 1118



 Score = 30.8 bits (68), Expect = 3.7
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = +1

Query: 184  QGNDSCDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCM 363
            +G   C    +  K  A KK+C  E   +E    ++  CE +    ++ A K+QC ++  
Sbjct: 963  KGKKKCKKLGKKSKRAAEKKKCA-EAAKKEKEAATKKKCEERAKKQKEAAEKKQCEERAK 1021

Query: 364  R 366
            +
Sbjct: 1022 K 1022



 Score = 30.4 bits (67), Expect = 4.9
 Identities = 14/56 (25%), Positives = 27/56 (48%)
 Frame = +1

Query: 199  CDIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMR 366
            C+ + +  K  A KKQC +E   +      +  CE +    ++ A K+QC ++  +
Sbjct: 1000 CEERAKKQKEAAEKKQC-EERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKK 1054



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>TICN1_MOUSE (Q62288) Testican-1 precursor (SPOCK protein)|
          Length = 442

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = +1

Query: 181 DQGNDSC-DIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQC 348
           D   D C  +KC  HKV   +      C SR+H  P +        HW  P+   +C
Sbjct: 83  DPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAHKHWLGPSNLVKC 139



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>TICN1_HUMAN (Q08629) Testican-1 precursor (SPOCK protein)|
          Length = 439

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = +1

Query: 181 DQGNDSC-DIKCQHHKVPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQC 348
           D   D C  +KC  HKV   +      C SR+H  P +        HW  P+   +C
Sbjct: 80  DPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAQKHWVGPSNLVKC 136



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>MACA1_RHOOP (O84992) Maleylacetate reductase 1 (EC 1.3.1.32) (Maleylacetate|
           reductase I)
          Length = 357

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -3

Query: 355 AARTVPSLPGLSNGYTSSRKTPCLGDDAPGCGTRRRTVSSSPE--LYDV 215
           AART      L   Y  S  TP LG+   G  T R T++  PE  +YDV
Sbjct: 109 AARTGVDQVILPTTYAGSEVTPVLGETVEGRKTTRSTLAVLPETVIYDV 157



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>VNCS_PAVPN (P18547) Noncapsid protein NS-1 (Nonstructural protein NS1)|
          Length = 660

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 465 TTSANIIKFRRGRSSAWTSATDGSIITRAGRLARGSVAI 581
           TT A +I  +RG  ++W  ATD    +    L +G V I
Sbjct: 52  TTDAEMINLQRGAETSWDQATDMEWESEIDSLTKGQVLI 90



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>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
           stimulating factor) (Superficial zone proteoglycan)
           [Contains: Proteoglycan-4 C-terminal part]
          Length = 1054

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +1

Query: 196 SCDIKCQHHK--VPARKKQCVDECHSREHHHPSRASCERKCSHWRDPARKEQCVQQCMRY 369
           +CD  CQH+    P  K+ C  E            SC+ +C       R+  C  QC +Y
Sbjct: 45  NCDYNCQHYMECCPDFKRVCSPEL-----------SCKGRCFESFARGRECDCDSQCKQY 93

Query: 370 G 372
           G
Sbjct: 94  G 94


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,154,236
Number of Sequences: 219361
Number of extensions: 1505304
Number of successful extensions: 5081
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5072
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6257125380
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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