ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2j11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 104 cgacgcggtcgctggacggggacatgacggtggacgagttcaaggagtggctccggcggt 163 |||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 17283999 cgacgcggtctctggacggcgacatgacggtggacgagttcaaggagtggctgaggcggt 17284058 Query: 164 tcgacgtggaccgcgacggccgcatcagccgcgacgagctgcggtgcgcgatgcgcacca 223 |||| || ||||||||||| |||||||||||||||||||||||| ||||||||||| ||| Sbjct: 17284059 tcgatgtcgaccgcgacgggcgcatcagccgcgacgagctgcggcgcgcgatgcgcgcca 17284118 Query: 224 tccggacgcgcttctcggggtacaagagcaagcgtggcatcgagtacgccgacaccgacg 283 ||||| |||| ||| |||||| | ||||| || |||||| ||||||||| | |||| Sbjct: 17284119 tccgggcgcggttcacggggtggaggagcaggcagggcatcagctacgccgacgcggacg 17284178 Query: 284 gcgacggctacgtcgacgacggcgaggtggacggcctcatcgagtacgcgcagaggagcc 343 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 17284179 gcgacggctacatcgacgacggcgaggtggacggcctcatcgagtacgcgcagaagagcc 17284238 Query: 344 tcgggctcaggatcgtcgcctactag 369 |||| ||||||||||||||||||||| Sbjct: 17284239 tcggcctcaggatcgtcgcctactag 17284264 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 140 agttcaaggagtggctccggcggttcgacgtggaccgcgacggccgcatcagccgcgacg 199 |||||||||||||| |||||| ||||||| ||| |||||||||||||||||||||||| Sbjct: 17278251 agttcaaggagtggatccggcagttcgacaccgacggcgacggccgcatcagccgcgacg 17278310 Query: 200 agctgcggtgcgcgatgcgc 219 ||||||| |||| |||||| Sbjct: 17278311 agctgcgccgcgccatgcgc 17278330 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 269 acgccgacaccgacggcgacggctacgtcgacgacggcgaggtggacggcctcatcgagt 328 |||||||| | ||||||||||||||| |||||||| ||||| | |||||||||||||||| Sbjct: 17278380 acgccgacgcggacggcgacggctacatcgacgacagcgagatcgacggcctcatcgagt 17278439 Query: 329 ac 330 || Sbjct: 17278440 ac 17278441 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 282 cggcgacggctacgtcgacgacggcgaggtggacggc 318 |||||||||| ||||| || |||||||||||||||| Sbjct: 19797057 cggcgacggcggcgtcgtcggcggcgaggtggacggc 19797093 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggctacgtcgacgacg 304 ||||| ||||||||||||| ||| |||||||| Sbjct: 5704729 cgacagcgacggcgacggcgacggcgacgacg 5704760
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 104 cgacgcggtcgctggacggggacatgacggtggacgagttcaaggagtggctccggcggt 163 |||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 70871 cgacgcggtctctggacggcgacatgacggtggacgagttcaaggagtggctgaggcggt 70930 Query: 164 tcgacgtggaccgcgacggccgcatcagccgcgacgagctgcggtgcgcgatgcgcacca 223 |||| || ||||||||||| |||||||||||||||||||||||| ||||||||||| ||| Sbjct: 70931 tcgatgtcgaccgcgacgggcgcatcagccgcgacgagctgcggcgcgcgatgcgcgcca 70990 Query: 224 tccggacgcgcttctcggggtacaagagcaagcgtggcatcgagtacgccgacaccgacg 283 ||||| |||| ||| |||||| | ||||| || |||||| ||||||||| | |||| Sbjct: 70991 tccgggcgcggttcacggggtggaggagcaggcagggcatcagctacgccgacgcggacg 71050 Query: 284 gcgacggctacgtcgacgacggcgaggtggacggcctcatcgagtacgcgcagaggagcc 343 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 71051 gcgacggctacatcgacgacggcgaggtggacggcctcatcgagtacgcgcagaagagcc 71110 Query: 344 tcgggctcaggatcgtcgcctactag 369 |||| ||||||||||||||||||||| Sbjct: 71111 tcggcctcaggatcgtcgcctactag 71136 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 140 agttcaaggagtggctccggcggttcgacgtggaccgcgacggccgcatcagccgcgacg 199 |||||||||||||| |||||| ||||||| ||| |||||||||||||||||||||||| Sbjct: 65123 agttcaaggagtggatccggcagttcgacaccgacggcgacggccgcatcagccgcgacg 65182 Query: 200 agctgcggtgcgcgatgcgc 219 ||||||| |||| |||||| Sbjct: 65183 agctgcgccgcgccatgcgc 65202 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 269 acgccgacaccgacggcgacggctacgtcgacgacggcgaggtggacggcctcatcgagt 328 |||||||| | ||||||||||||||| |||||||| ||||| | |||||||||||||||| Sbjct: 65252 acgccgacgcggacggcgacggctacatcgacgacagcgagatcgacggcctcatcgagt 65311 Query: 329 ac 330 || Sbjct: 65312 ac 65313
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 104 cgacgcggtcgctggacggggacatgacggtggacgagttcaaggagtggctccggcggt 163 |||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 7912 cgacgcggtctctggacggcgacatgacggtggacgagttcaaggagtggctgaggcggt 7971 Query: 164 tcgacgtggaccgcgacggccgcatcagccgcgacgagctgcggtgcgcgatgcgcacca 223 |||| || ||||||||||| |||||||||||||||||||||||| ||||||||||| ||| Sbjct: 7972 tcgatgtcgaccgcgacgggcgcatcagccgcgacgagctgcggcgcgcgatgcgcgcca 8031 Query: 224 tccggacgcgcttctcggggtacaagagcaagcgtggcatcgagtacgccgacaccgacg 283 ||||| |||| ||| |||||| | ||||| || |||||| ||||||||| | |||| Sbjct: 8032 tccgggcgcggttcacggggtggaggagcaggcagggcatcagctacgccgacgcggacg 8091 Query: 284 gcgacggctacgtcgacgacggcgaggtggacggcctcatcgagtacgcgcagaggagcc 343 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 8092 gcgacggctacatcgacgacggcgaggtggacggcctcatcgagtacgcgcagaagagcc 8151 Query: 344 tcgggctcaggatcgtcgcctactag 369 |||| ||||||||||||||||||||| Sbjct: 8152 tcggcctcaggatcgtcgcctactag 8177 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 140 agttcaaggagtggctccggcggttcgacgtggaccgcgacggccgcatcagccgcgacg 199 |||||||||||||| |||||| ||||||| ||| |||||||||||||||||||||||| Sbjct: 2164 agttcaaggagtggatccggcagttcgacaccgacggcgacggccgcatcagccgcgacg 2223 Query: 200 agctgcggtgcgcgatgcgc 219 ||||||| |||| |||||| Sbjct: 2224 agctgcgccgcgccatgcgc 2243 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 269 acgccgacaccgacggcgacggctacgtcgacgacggcgaggtggacggcctcatcgagt 328 |||||||| | ||||||||||||||| |||||||| ||||| | |||||||||||||||| Sbjct: 2293 acgccgacgcggacggcgacggctacatcgacgacagcgagatcgacggcctcatcgagt 2352 Query: 329 ac 330 || Sbjct: 2353 ac 2354
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 274 gacaccgacggcgacggctacgtcgacg 301 |||||||||||||||||| ||||||||| Sbjct: 45997 gacaccgacggcgacggcgacgtcgacg 45970
>ref|XM_472436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 927 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacgg 305 ||||||||||||| ||||||||||||| Sbjct: 36 cgacggcgacggcgacgtcgacgacgg 10
>gb|AY023921.1| Oryza sativa microsatellite MRG6246 containing (ATCG)X7, closest to marker S13312, genomic sequence Length = 228 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggcgag 309 ||||||||||||| ||||||||| ||||||| Sbjct: 56 cgacggcgacggcgacgtcgacgtcggcgag 26
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacgg 305 ||||||||||||| ||||||||||||| Sbjct: 68023 cgacggcgacggcgacgtcgacgacgg 67997
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacgg 305 ||||||||||||| ||||||||||||| Sbjct: 20633589 cgacggcgacggcgacgtcgacgacgg 20633563
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacgacggcgag 309 ||||||||||||| ||||||||| ||||||| Sbjct: 39164263 cgacggcgacggcgacgtcgacgtcggcgag 39164293 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 gccgacaccgacggcgacggc 291 ||||||||||||||||||||| Sbjct: 23806996 gccgacaccgacggcgacggc 23806976 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggc 291 ||||||||||||||||||||| Sbjct: 17577907 gccgacaccgacggcgacggc 17577927 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 acgccgacaccgacggcgacg 289 ||||||||||||||||||||| Sbjct: 7008687 acgccgacaccgacggcgacg 7008707
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacgacggcgag 309 ||||||||||||| ||||||||| ||||||| Sbjct: 40023 cgacggcgacggcgacgtcgacgtcggcgag 40053
>ref|XM_475935.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 acgccgacaccgacggcgacgg 290 |||||||||||||||||||||| Sbjct: 431 acgccgacaccgacggcgacgg 452
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 acgccgacaccgacggcgacgg 290 |||||||||||||||||||||| Sbjct: 65568 acgccgacaccgacggcgacgg 65547
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 87 caggaacgtgacggcggcgacg 108 |||||||||||||||||||||| Sbjct: 280925 caggaacgtgacggcggcgacg 280904
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 gcgacggccgcatcagccgcgacgag 201 ||||||||||||||||||||| |||| Sbjct: 3980128 gcgacggccgcatcagccgcgccgag 3980153
>gb|AE012181.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 89 of 460 of the complete genome Length = 10179 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 gcgacggccgcatcagccgcgacgag 201 ||||||||||||||||||||| |||| Sbjct: 230 gcgacggccgcatcagccgcgccgag 205
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 gcgacggccgcatcagccgcgacgag 201 ||||||||||||||||||||| |||| Sbjct: 4069691 gcgacggccgcatcagccgcgccgag 4069716
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gccgacaccgacggcgacggct 292 |||||||||||||||||||||| Sbjct: 259886 gccgacaccgacggcgacggct 259865
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gccgacaccgacggcgacggct 292 |||||||||||||||||||||| Sbjct: 244495 gccgacaccgacggcgacggct 244474
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 269 acgccgacaccgacggcgacgg 290 |||||||||||||||||||||| Sbjct: 28537875 acgccgacaccgacggcgacgg 28537854 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 gccgacaccgacggcgacggctac 294 |||||| ||||||||||||||||| Sbjct: 18262810 gccgactccgacggcgacggctac 18262787 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggcgaggtggacggc 318 ||||||||||||| ||| || ||||| ||||| ||||||| Sbjct: 3279161 cgacggcgacggcgacggcgtcgacgacgaggaggacggc 3279122
>dbj|AK119799.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-H08, full insert sequence Length = 741 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 269 acgccgacaccgacggcgacgg 290 |||||||||||||||||||||| Sbjct: 494 acgccgacaccgacggcgacgg 515
>emb|AJ234491.1|HVU234491 Hordeum vulgare genomic DNA fragment; clone MWG0533.uni Length = 280 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 gacggcggcgacgcggtcgctg 117 |||||||||||||||||||||| Sbjct: 199 gacggcggcgacgcggtcgctg 178
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 gcgacggccgcatcagccgcgacgag 201 ||||||||||||||||||||| |||| Sbjct: 3982421 gcgacggccgcatcagccgcgccgag 3982446
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacg 304 ||||||| |||||||||||||||||| Sbjct: 745599 cgacggcaacggctacgtcgacgacg 745574
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gccgacaccgacggcgacggct 292 |||||||||||||||||||||| Sbjct: 244495 gccgacaccgacggcgacggct 244474
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 gccgacaccgacggcgacggct 292 |||||||||||||||||||||| Sbjct: 259886 gccgacaccgacggcgacggct 259865
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggct 292 |||||||||||||||||||||| Sbjct: 60498 gccgacaccgacggcgacggct 60519
>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 96667 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggct 292 |||||||||||||||||||||| Sbjct: 15370 gccgacaccgacggcgacggct 15391
>ref|NM_188568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 acgccgacaccgacggcgacg 289 ||||||||||||||||||||| Sbjct: 536 acgccgacaccgacggcgacg 556
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 282 cggcgacggctacgtcgacgacggc 306 |||| |||||||||||||||||||| Sbjct: 138283 cggcaacggctacgtcgacgacggc 138259
>ref|NM_192671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggc 291 ||||||||||||||||||||| Sbjct: 655 gccgacaccgacggcgacggc 675
>ref|XM_463272.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggc 291 ||||||||||||||||||||| Sbjct: 550 gccgacaccgacggcgacggc 570
>gb|BT016402.1| Zea mays clone Contig235 mRNA sequence Length = 1103 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 162 gttcgacgtggaccgcgacggccgcatca 190 |||||||| |||| ||||||||||||||| Sbjct: 446 gttcgacgcggacggcgacggccgcatca 474
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 282 cggcgacggctacgtcgacgacggcgaggtggacggc 318 |||||||||| ||||| || |||||||||||||||| Sbjct: 124324 cggcgacggcggcgtcgtcggcggcgaggtggacggc 124360
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 166 gacgtggaccgcgacggccgcatcagccg 194 |||| |||||||||||| ||||||||||| Sbjct: 11066877 gacgcggaccgcgacggtcgcatcagccg 11066905
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 217 cgcaccatccggacgcgcttctcgg 241 |||||||||| |||||||||||||| Sbjct: 1144743 cgcaccatccagacgcgcttctcgg 1144719
>emb|AL157758.10| Human DNA sequence from clone RP11-106H11 on chromosome 13 Contains the 5' end of a novel gene (contains FLJ31860 and KIAA0853), possible ortholog of mouse 3110050K21Rik protein, the 3' end of the CPB2 gene for carboxypeptidase B2 (plasma, carboxypeptidase U) and a CpG island, complete sequence Length = 58097 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 ttcttgtgtacttattggcta 490 ||||||||||||||||||||| Sbjct: 27280 ttcttgtgtacttattggcta 27260
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 166 gacgtggaccgcgacggccgcatcagccg 194 |||| |||||||||||| ||||||||||| Sbjct: 66245 gacgcggaccgcgacggtcgcatcagccg 66217
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 186 catcagccgcgacgagctgcg 206 ||||||||||||||||||||| Sbjct: 24085 catcagccgcgacgagctgcg 24105
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 276 caccgacggcgacggctacgtcgac 300 ||||| ||||||||||||||||||| Sbjct: 80340 caccggcggcgacggctacgtcgac 80316
>gb|S74247.1| GCAP=photoreceptor guanylyl cyclase-activating protein [cattle, retinas, Genomic, 985 nt] Length = 985 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 165 cgacgtggaccgcgacggccgcatcagccgcgacgagctgc 205 |||||||||| || |||| |||||| |||||||||||||| Sbjct: 545 cgacgtggacggcaacggatgcatcatccgcgacgagctgc 585
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacgacggcg 307 ||||||||||||| ||| ||||||||||| Sbjct: 16957303 cgacggcgacggcaacggcgacgacggcg 16957331 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 280 gacggcgacggctacgtcgacgacggcg 307 |||||||||||| ||||||||| ||||| Sbjct: 5315036 gacggcgacggcgacgtcgacggcggcg 5315063
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 gacggctacgtcgacgacggcgagg 310 |||||| |||||||||||||||||| Sbjct: 2639815 gacggcgacgtcgacgacggcgagg 2639839 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacga 302 ||||||||||||| |||||||||| Sbjct: 13503968 cgacggcgacggcgacgtcgacga 13503991
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 166 gacgtggaccgcgacggccgcatcagccg 194 |||| |||||||||||| ||||||||||| Sbjct: 11063640 gacgcggaccgcgacggtcgcatcagccg 11063668
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacgacggcg 307 ||||||||||||| ||| ||||||||||| Sbjct: 141755 cgacggcgacggcaacggcgacgacggcg 141783
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 acgccgacaccgacggcgacg 289 ||||||||||||||||||||| Sbjct: 130505 acgccgacaccgacggcgacg 130525
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 gacggctacgtcgacgacggcgagg 310 |||||| |||||||||||||||||| Sbjct: 65533 gacggcgacgtcgacgacggcgagg 65557
>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436D06 Length = 148246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggc 291 ||||||||||||||||||||| Sbjct: 95479 gccgacaccgacggcgacggc 95499
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 gccgacaccgacggcgacggc 291 ||||||||||||||||||||| Sbjct: 87581 gccgacaccgacggcgacggc 87561
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 282 cggcgacggctacgtcgacgacggcgaggtggacggc 318 |||||||||| ||||| || |||||||||||||||| Sbjct: 21497 cggcgacggcggcgtcgtcggcggcgaggtggacggc 21533
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 282 cggcgacggctacgtcgacgacggcgaggtggacggc 318 |||||||||| ||||| || |||||||||||||||| Sbjct: 142743 cggcgacggcggcgtcgtcggcggcgaggtggacggc 142779
>dbj|AK099476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024O19, full insert sequence Length = 942 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 166 gacgtggaccgcgacggccgcatcagccg 194 |||| |||||||||||| ||||||||||| Sbjct: 180 gacgcggaccgcgacggtcgcatcagccg 208
>dbj|AK072726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139K02, full insert sequence Length = 891 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggc 291 ||||||||||||||||||||| Sbjct: 585 gccgacaccgacggcgacggc 605
>dbj|AK064844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G08, full insert sequence Length = 1075 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggc 291 ||||||||||||||||||||| Sbjct: 674 gccgacaccgacggcgacggc 694
>dbj|AK058663.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G06, full insert sequence Length = 799 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 166 gacgtggaccgcgacggccgcatcagccg 194 |||| |||||||||||| ||||||||||| Sbjct: 177 gacgcggaccgcgacggtcgcatcagccg 205
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 166 gacgtggaccgcgacggccgcatcagccg 194 |||| |||||||||||| ||||||||||| Sbjct: 110362 gacgcggaccgcgacggtcgcatcagccg 110390
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacgacggcg 307 ||||||||||||| ||| ||||||||||| Sbjct: 16966343 cgacggcgacggcaacggcgacgacggcg 16966371 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 280 gacggcgacggctacgtcgacgacggcg 307 |||||||||||| ||||||||| ||||| Sbjct: 5315823 gacggcgacggcgacgtcgacggcggcg 5315850
>ref|NM_120143.2| Arabidopsis thaliana MI-1-P SYNTHASE; inositol-3-phosphate synthase AT4G39800 (MI-1-P SYNTHASE) mRNA, complete cds Length = 1918 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 949 ttgatatggcgatcaggaac 968
>gb|AE010366.1| Methanopyrus kandleri AV19 section 65 of 157 of the complete genome Length = 11173 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ctcgggctcaggatcgtcgc 362 |||||||||||||||||||| Sbjct: 4698 ctcgggctcaggatcgtcgc 4717
>ref|XM_483780.1| Oryza sativa (japonica cultivar-group), mRNA Length = 646 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggct 292 |||||||||||||||||||| Sbjct: 302 cgacaccgacggcgacggct 321
>ref|XM_475605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2313 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacgacggcgaggtggacggc 318 ||||||||||||| ||| || ||||| ||||| ||||||| Sbjct: 165 cgacggcgacggcgacggcgtcgacgacgaggaggacggc 204
>ref|XM_475168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 606 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggctac 294 |||||| ||||||||||||||||| Sbjct: 295 gccgactccgacggcgacggctac 318
>ref|XM_477723.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1410 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacga 302 ||||||||||||| |||||||||| Sbjct: 696 cgacggcgacggcgacgtcgacga 719
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 ccgacaccgacggcgacggctacg 295 |||||||| ||||||||||||||| Sbjct: 2592364 ccgacaccaacggcgacggctacg 2592387
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 280 gacggcgacggctacgtcgacgacggcg 307 |||||||||||| ||||||||| ||||| Sbjct: 78234 gacggcgacggcgacgtcgacggcggcg 78261
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 282 cggcgacggctacgtcgacgacgg 305 |||| ||||||||||||||||||| Sbjct: 3066017 cggcaacggctacgtcgacgacgg 3065994
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ccgacaccgacggcgacggc 291 |||||||||||||||||||| Sbjct: 4383450 ccgacaccgacggcgacggc 4383431
>ref|NM_001018111.1| Homo sapiens podocalyxin-like (PODXL), transcript variant 1, mRNA Length = 5999 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggc 306 ||||||||||||| ||| |||||||||| Sbjct: 337 cgacggcgacggcgacggcgacgacggc 310
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 cggcgacggctacgtcgacgacgg 305 |||| ||||||||||||||||||| Sbjct: 166357 cggcaacggctacgtcgacgacgg 166380
>gb|AE007196.1| Sinorhizobium meliloti 1021 plasmid pSymA section 2 of 121 of the complete plasmid sequence Length = 10029 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acgtggaccgcgacggccgc 186 |||||||||||||||||||| Sbjct: 10 acgtggaccgcgacggccgc 29
>gb|AE007195.1| Sinorhizobium meliloti 1021 plasmid pSymA section 1 of 121 of the complete plasmid sequence Length = 11408 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acgtggaccgcgacggccgc 186 |||||||||||||||||||| Sbjct: 11358 acgtggaccgcgacggccgc 11377
>ref|NM_005397.2| Homo sapiens podocalyxin-like (PODXL), transcript variant 2, mRNA Length = 5903 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggc 306 ||||||||||||| ||| |||||||||| Sbjct: 337 cgacggcgacggcgacggcgacgacggc 310
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 gccgacaccgacggcgacggctac 294 |||||| ||||||||||||||||| Sbjct: 56022 gccgactccgacggcgacggctac 55999
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggcgaggtggacggcctcatcgag 327 |||||||| ||||||||||||||| Sbjct: 44712 ggcgaggtagacggcctcatcgag 44689
>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome Length = 235645 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 163174 cgacggcgacgtcgacgacggcga 163151
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cggccgcatcagccgcgacg 199 |||||||||||||||||||| Sbjct: 3279542 cggccgcatcagccgcgacg 3279561
>gb|AY486478.1|AY486470S09 Human herpesvirus 5 strain Toledo genome, partial sequence Length = 10194 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 5845 cgacggcgacgtcgacgacggcga 5822
>ref|XM_842579.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0649) partial mRNA Length = 2496 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggcgaggtggacggcctcatcgag 327 |||||||| ||||||||||||||| Sbjct: 454 ggcgaggtagacggcctcatcgag 477
>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence Length = 233739 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 58803 cgacggcgacgtcgacgacggcga 58826
>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence Length = 229209 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 65034 cgacggcgacgtcgacgacggcga 65057
>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence Length = 234881 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 198870 cgacggcgacgtcgacgacggcga 198847
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence Length = 226889 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 60475 cgacggcgacgtcgacgacggcga 60498
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence Length = 229700 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 65137 cgacggcgacgtcgacgacggcga 65160
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence Length = 229483 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 196315 cgacggcgacgtcgacgacggcga 196292
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome Length = 231236 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 161288 cgacggcgacgtcgacgacggcga 161265
>gb|AY303985.1| Plagiolepis pygmaea isolate P23 microsatellite sequence Length = 532 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacga 302 ||||||||||||| |||||||||| Sbjct: 393 cgacggcgacggcgacgtcgacga 370
>ref|XM_500631.1| Yarrowia lipolytica CLIB122, YALI0B08206g predicted mRNA Length = 1236 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tcgacgacggcgaggtggac 315 |||||||||||||||||||| Sbjct: 991 tcgacgacggcgaggtggac 972
>emb|AL162371.13| Human DNA sequence from clone RP11-16M10 on chromosome 13, complete sequence Length = 64028 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 tctatccatgcatgttacct 431 |||||||||||||||||||| Sbjct: 5697 tctatccatgcatgttacct 5716
>emb|Z98604.1|MLCB2052 Mycobacterium leprae cosmid B2052 Length = 35445 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gacggcgacggctacgtcga 299 |||||||||||||||||||| Sbjct: 31233 gacggcgacggctacgtcga 31252
>emb|Z23265.1|YLCRF1 Y.lipolytica CRF1 gene encoding product required for copper resistance Length = 4020 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tcgacgacggcgaggtggac 315 |||||||||||||||||||| Sbjct: 2452 tcgacgacggcgaggtggac 2433
>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome Length = 229354 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 161846 cgacggcgacgtcgacgacggcga 161823
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ccgacaccgacggcgacggc 291 |||||||||||||||||||| Sbjct: 224411 ccgacaccgacggcgacggc 224392
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 282 cggcgacggctacgtcgacgacgg 305 |||| ||||||||||||||||||| Sbjct: 4018213 cggcaacggctacgtcgacgacgg 4018236
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ccgacaccgacggcgacggc 291 |||||||||||||||||||| Sbjct: 258104 ccgacaccgacggcgacggc 258085
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 acggcgacggctacgtcgacgacg 304 |||||| ||||||||||||||||| Sbjct: 43982 acggcgccggctacgtcgacgacg 44005
>gb|AY035045.1| Arabidopsis thaliana At4g39800 mRNA, complete sequence Length = 1930 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 949 ttgatatggcgatcaggaac 968
>emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN complete genome; segment 6/10 Length = 318200 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gacggcgacggctacgtcga 299 |||||||||||||||||||| Sbjct: 24420 gacggcgacggctacgtcga 24401
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91 Length = 198151 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 190756 ttgatatggcgatcaggaac 190737
>emb|AL035708.2|ATT5J17 Arabidopsis thaliana DNA chromosome 4, BAC clone T5J17 (ESSA project) Length = 118267 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 8172 ttgatatggcgatcaggaac 8153
>emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project) Length = 88343 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 73726 ttgatatggcgatcaggaac 73707
>gb|AC159903.3| Pan troglodytes BAC clone CH251-459A3 from chromosome unknown, complete sequence Length = 216963 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 gtctattaagggaagctagc 405 |||||||||||||||||||| Sbjct: 135196 gtctattaagggaagctagc 135177
>gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0022I16, complete sequence Length = 126133 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 280 gacggcgacggctacgtcgacgacggcg 307 |||||||||||| ||||||||| ||||| Sbjct: 11166 gacggcgacggcgacgtcgacggcggcg 11193
>gb|AF447493.1| Azospirillum brasilense strain Sp7 acetoacetyl-CoA synthetase (acsA) gene, complete cds Length = 1980 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gacggcggcgacgcggtcgc 115 |||||||||||||||||||| Sbjct: 462 gacggcggcgacgcggtcgc 443
>gb|AF372954.1|AF372954 Arabidopsis thaliana AT4g39800/T19P19_190 mRNA, complete cds Length = 1870 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 949 ttgatatggcgatcaggaac 968
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggct 292 |||||||||||||||||||| Sbjct: 28070438 cgacaccgacggcgacggct 28070457
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacga 302 ||||||||||||| |||||||||| Sbjct: 2773491 cgacggcgacggcgacgtcgacga 2773514
>emb|BX827819.1|CNS0A4MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1828 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 935 ttgatatggcgatcaggaac 954
>gb|AC080091.5| Homo sapiens BAC clone RP11-802G5 from 2, complete sequence Length = 158813 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 gtctattaagggaagctagc 405 |||||||||||||||||||| Sbjct: 37865 gtctattaagggaagctagc 37884
>dbj|AK223573.1| Homo sapiens mRNA for podocalyxin-like precursor variant, clone: FCC129D02 Length = 2056 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggc 306 ||||||||||||| ||| |||||||||| Sbjct: 337 cgacggcgacggcgacggcgacgacggc 310
>gb|BC093730.1| Homo sapiens podocalyxin-like, mRNA (cDNA clone MGC:120765 IMAGE:7939575), complete cds Length = 1672 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggc 306 ||||||||||||| ||| |||||||||| Sbjct: 107 cgacggcgacggcgacggcgacgacggc 80
>gb|AF200304.1|AF200304 Caldibacillus cellulovorans putative type IIIb cellulose-binding domain gene, partial cds; and beta-1,4-xylanase XynA precursor (xynA) gene, complete cds Length = 3237 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 acgccgacaccgacggcgac 288 |||||||||||||||||||| Sbjct: 2637 acgccgacaccgacggcgac 2656
>gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180C16, complete sequence Length = 162694 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacgacggc 306 ||||||||||||| ||| |||||||||| Sbjct: 65734 cgacggcgacggcgacggcgacgacggc 65761
>dbj|AB110611.1| Pseudomonas sp. MT-1 nar gene cluster (orf1, orf2, orf3, narL, narX, narK, orf4, narM, narG, narH, narJ, narI, nifM), partial and complete cds Length = 15819 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 tacaagagcaagcgtggcat 263 |||||||||||||||||||| Sbjct: 8932 tacaagagcaagcgtggcat 8951
>gb|BC042466.1| Homo sapiens, Similar to podocalyxin-like, clone IMAGE:5172924, mRNA Length = 6199 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggc 306 ||||||||||||| ||| |||||||||| Sbjct: 291 cgacggcgacggcgacggcgacgacggc 264
>gb|AY085931.1| Arabidopsis thaliana clone 1978 mRNA, complete sequence Length = 1837 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 949 ttgatatggcgatcaggaac 968
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggct 292 |||||||||||||||||||| Sbjct: 147930 cgacaccgacggcgacggct 147949
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 278 ccgacggcgacggctacgtcgacgacggcgag 309 |||||||||||| ||||||| |||||||||| Sbjct: 3806659 ccgacggcgacgactacgtcatcgacggcgag 3806690
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 294 cgtcgacgacggcgaggtggacggcctcatcg 325 ||||||| ||||||||||| ||||||||||| Sbjct: 1250660 cgtcgaccgcggcgaggtggtcggcctcatcg 1250629
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ccgacaccgacggcgacggc 291 |||||||||||||||||||| Sbjct: 203616 ccgacaccgacggcgacggc 203597
>dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0030K05 Length = 157835 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggctacgtcgacgacg 304 ||||| ||||||||||||| ||| |||||||| Sbjct: 139407 cgacagcgacggcgacggcgacggcgacgacg 139438
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggctacgtcgacgacg 304 ||||| ||||||||||||| ||| |||||||| Sbjct: 934 cgacagcgacggcgacggcgacggcgacgacg 965
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacga 302 ||||||||||||| |||||||||| Sbjct: 41719 cgacggcgacggcgacgtcgacga 41742
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacga 302 ||||||||||||| |||||||||| Sbjct: 83651 cgacggcgacggcgacgtcgacga 83674
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggct 292 |||||||||||||||||||| Sbjct: 67933 cgacaccgacggcgacggct 67952
>dbj|AK121445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141E01, full insert sequence Length = 646 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggct 292 |||||||||||||||||||| Sbjct: 302 cgacaccgacggcgacggct 321
>emb|Y17835.1|PPY17835 Phleum pratense mRNA for p7 protein Length = 575 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggct 292 |||||||||||||||||||| Sbjct: 189 cgacaccgacggcgacggct 208
>dbj|AK107275.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-A04, full insert sequence Length = 2661 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 279 cgacggcgacggctacgtcgacgacggcgaggtggacggc 318 ||||||||||||| ||| || ||||| ||||| ||||||| Sbjct: 260 cgacggcgacggcgacggcgtcgacgacgaggaggacggc 299
>dbj|AK099962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126K19, full insert sequence Length = 961 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggctac 294 |||||| ||||||||||||||||| Sbjct: 395 gccgactccgacggcgacggctac 418
>gb|BC112035.1| Homo sapiens podocalyxin-like, transcript variant 2, mRNA (cDNA clone MGC:138240 IMAGE:8327503), complete cds Length = 1684 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggc 306 ||||||||||||| ||| |||||||||| Sbjct: 119 cgacggcgacggcgacggcgacgacggc 92
>dbj|AK067214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097O18, full insert sequence Length = 961 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 gccgacaccgacggcgacggctac 294 |||||| ||||||||||||||||| Sbjct: 395 gccgactccgacggcgacggctac 418
>gb|AY106010.1| Zea mays PCO109103 mRNA sequence Length = 513 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cgacaccgacggcgacggct 292 |||||||||||||||||||| Sbjct: 308 cgacaccgacggcgacggct 327
>gb|AF131877.1|AF131877 Streptomyces collinus putative naphthomycin AHBA biosynthetic gene cluster, complete sequence Length = 7298 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 292 tacgtcgacgacggcgaggtggacggcc 319 |||| ||||||||||||||| ||||||| Sbjct: 4878 tacggcgacgacggcgaggtcgacggcc 4851
>gb|BT001931.1| Arabidopsis thaliana clone C105378 putative myo-inositol-1-phosphate synthase (At4g39800) mRNA, complete cds Length = 1567 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 878 ttgatatggcgatcaggaac 897
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 gacggcgacggctacgtcgacgac 303 ||||||||||||||||||| |||| Sbjct: 2566881 gacggcgacggctacgtcgccgac 2566858 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 acgccgacaccgacggcgacggctacgt 296 ||||||| ||||||||||||||||||| Sbjct: 1263988 acgccgaagccgacggcgacggctacgt 1263961
>gb|U97519.1|HSU97519 Homo sapiens podocalyxin-like protein mRNA, complete cds Length = 5869 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggc 306 ||||||||||||| ||| |||||||||| Sbjct: 337 cgacggcgacggcgacggcgacgacggc 310
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 296 tcgacgacggcgaggtggac 315 |||||||||||||||||||| Sbjct: 1112815 tcgacgacggcgaggtggac 1112796
>gb|U57433.1|HCU57433 Human cytomegalovirus early phosphoprotein p34 mRNA, complete cds Length = 2401 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 1313 cgacggcgacgtcgacgacggcga 1290
>gb|U57432.1|HCU57432 Human cytomegalovirus early phosphoprotein p84 mRNA, complete cds Length = 2253 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 cgacggctacgtcgacgacggcga 308 ||||||| |||||||||||||||| Sbjct: 1165 cgacggcgacgtcgacgacggcga 1142
>gb|AD000008.1|MSGY367 Mycobacterium tuberculosis sequence from clone y367 Length = 35336 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ccgacaccgacggcgacggc 291 |||||||||||||||||||| Sbjct: 16815 ccgacaccgacggcgacggc 16834
>gb|U38920.1|PVU38920 Phaseolus vulgaris 1L-myo-inositol 1-phosphate synthase mRNA, complete cds Length = 1871 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 964 ttgatatggcgatcaggaac 983
>gb|U04876.1|ATU04876 Arabidopsis thaliana Columbia myo-inositol-1-phosphate synthase mRNA, complete cds Length = 1921 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ttgatatggcgatcaggaac 93 |||||||||||||||||||| Sbjct: 928 ttgatatggcgatcaggaac 947
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 279 cgacggcgacggctacgtcgacgacggcgaggtggacggc 318 ||||||||||||| ||| || ||||| ||||| ||||||| Sbjct: 72985 cgacggcgacggcgacggcgtcgacgacgaggaggacggc 72946
>gb|U04727.1|PPU04727 Porphyra purpurea Avonport clone 23b6 sporophyte-specific mRNA, partial sequence Length = 1008 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tgacggcggcgacgcggtcg 114 |||||||||||||||||||| Sbjct: 516 tgacggcggcgacgcggtcg 497 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,872,143 Number of Sequences: 3902068 Number of extensions: 2872143 Number of successful extensions: 62882 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59280 Number of HSP's gapped (non-prelim): 3599 length of query: 549 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 526 effective length of database: 17,143,297,704 effective search space: 9017374592304 effective search space used: 9017374592304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
