ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2j09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED ... 28 8.5

>DNJ15_ARATH (Q9ZSY2) Chaperone protein dnaJ 15 (Protein ALTERED RESPONSE TO|
           GRAVITY) (AtARG1) (AtJ15) (AtDjB15)
          Length = 410

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 126 DNLAN*NILVARGKESKSDSRSSGERNGEQ 215
           +NL+N +   A+G ESK D  S+GE  G +
Sbjct: 359 NNLSNGSSSKAQGDESKGDGDSAGEEGGTE 388


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,384,386
Number of Sequences: 219361
Number of extensions: 374060
Number of successful extensions: 758
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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