ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2j09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 412 bits (208), Expect = e-112 Identities = 208/208 (100%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120032 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 119973 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119972 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 119913 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119912 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 119853 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 119852 ttcccgtagtagcggcgagcgaaatggg 119825 Score = 412 bits (208), Expect = e-112 Identities = 208/208 (100%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94862 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 94921 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94922 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 94981 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94982 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 95041 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 95042 ttcccgtagtagcggcgagcgaaatggg 95069
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118813 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 118754 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118753 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 118694 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118693 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 118634 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 118633 ttcccgtagtagcggcgagcgaaatggg 118606
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 884 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 883 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 824 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 823 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 764 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 763 ttcccgtagtagcggcgagcgaaatggg 736
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119897 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 119838 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 119837 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 119778 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119777 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 119718 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 119717 ttcccgtagtagcggcgagcgaaatggg 119690 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95259 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 95318 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 95319 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 95378 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95379 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 95438 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 95439 ttcccgtagtagcggcgagcgaaatggg 95466
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119897 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 119838 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 119837 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 119778 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119777 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 119718 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 119717 ttcccgtagtagcggcgagcgaaatggg 119690 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95259 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 95318 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 95319 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 95378 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95379 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 95438 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 95439 ttcccgtagtagcggcgagcgaaatggg 95466
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119846 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 119787 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 119786 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 119727 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119726 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 119667 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 119666 ttcccgtagtagcggcgagcgaaatggg 119639 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95204 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 95263 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 95264 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 95323 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95324 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 95383 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 95384 ttcccgtagtagcggcgagcgaaatggg 95411
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507837 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 31507896 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31507897 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 31507956 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507957 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 31508016 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 31508017 ttcccgtagtagcggcgagcgaaatggg 31508044
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84759 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 84700 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 84699 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 84640 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84639 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 84580 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 84579 ttcccgtagtagcggcgagcgaaatggg 84552
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119866 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 119807 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 119806 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 119747 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119746 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 119687 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 119686 ttcccgtagtagcggcgagcgaaatggg 119659 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95252 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 95311 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 95312 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 95371 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95372 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 95431 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 95432 ttcccgtagtagcggcgagcgaaatggg 95459
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122301 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 122360 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 122361 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 122420 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122421 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 122480 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 122481 ttcccgtagtagcggcgagcgaaatggg 122508 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14026 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 14085 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 14086 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 14145 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14146 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 14205 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 14206 ttcccgtagtagcggcgagcgaaatggg 14233
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140834 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 140893 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140894 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 140953 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140954 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 141013 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 141014 ttcccgtagtagcggcgagcgaaatggg 141041
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93430 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 93489 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 93490 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 93549 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93550 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 93609 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 93610 ttcccgtagtagcggcgagcgaaatggg 93637
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44857 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 44798 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 44797 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 44738 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44737 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 44678 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 44677 ttcccgtagtagcggcgagcgaaatggg 44650 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20261 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 20320 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 20321 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 20380 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20381 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 20440 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 20441 ttcccgtagtagcggcgagcgaaatggg 20468
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58585 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 58526 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 58525 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 58466 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58465 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 58406 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 58405 ttcccgtagtagcggcgagcgaaatggg 58378
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1486 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 1427 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1426 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 1367 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1366 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 1307 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 1306 ttcccgtagtagcggcgagcgaaatggg 1279
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27494 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 27553 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 27554 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 27613 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27614 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 27673 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 27674 ttcccgtagtagcggcgagcgaaatggg 27701
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268186 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 9268245 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9268246 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 9268305 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268306 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 9268365 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 9268366 ttcccgtagtagcggcgagcgaaatggg 9268393 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227686 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 9227745 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9227746 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 9227805 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227806 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 9227865 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 9227866 ttcccgtagtagcggcgagcgaaatggg 9227893 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164275 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 9164334 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9164335 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 9164394 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164395 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 9164454 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 9164455 ttcccgtagtagcggcgagcgaaatggg 9164482 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056100 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 9056159 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9056160 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 9056219 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056220 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 9056279 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 9056280 ttcccgtagtagcggcgagcgaaatggg 9056307
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938171 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 19938230 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 19938231 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 19938290 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938291 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 19938350 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 19938351 ttcccgtagtagcggcgagcgaaatggg 19938378 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387038 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 10387097 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10387098 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 10387157 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 10387217 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 10387218 ttcccgtagtagcggcgagcgaaatggg 10387245 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277260 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 10277201 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10277200 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 10277141 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 10277081 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 10277080 ttcccgtagtagcggcgagcgaaatggg 10277053
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598353 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 31598412 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31598413 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 31598472 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598473 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 31598532 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 31598533 ttcccgtagtagcggcgagcgaaatggg 31598560
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525669 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 33525728 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 33525729 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 33525788 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525789 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 33525848 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 33525849 ttcccgtagtagcggcgagcgaaatggg 33525876 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttc 40 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 19455158 cagatacgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47872 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 47813 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 47812 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 47753 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47752 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 47693 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 47692 ttcccgtagtagcggcgagcgaaatggg 47665
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70866 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 70925 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 70926 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 70985 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70986 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 71045 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 71046 ttcccgtagtagcggcgagcgaaatggg 71073
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123696 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 123637 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 123636 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 123577 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123576 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 123517 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 123516 ttcccgtagtagcggcgagcgaaatggg 123489 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99141 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 99200 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 99201 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 99260 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99261 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 99320 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 99321 ttcccgtagtagcggcgagcgaaatggg 99348
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 97 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 98 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 157 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 218 ttcccgtagtagcggcgagcgaaatggg 245
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 98 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 99 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 158 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 218 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 219 ttcccgtagtagcggcgagcgaaatggg 246
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 97 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 98 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 157 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 218 ttcccgtagtagcggcgagcgaaatggg 245
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 97 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 98 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 157 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 218 ttcccgtagtagcggcgagcgaaatggg 245
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 94 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 95 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 154 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 214 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 215 ttcccgtagtagcggcgagcgaaatggg 242
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949447 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 19949506 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 19949507 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 19949566 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949567 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 19949626 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 19949627 ttcccgtagtagcggcgagcgaaatggg 19949654 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393077 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 10393136 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10393137 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 10393196 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393197 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 10393256 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 10393257 ttcccgtagtagcggcgagcgaaatggg 10393284 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283299 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 10283240 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10283239 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 10283180 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283179 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 10283120 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 10283119 ttcccgtagtagcggcgagcgaaatggg 10283092
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124413 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 124354 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 124353 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 124294 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124293 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 124234 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 124233 ttcccgtagtagcggcgagcgaaatggg 124206 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99818 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 99877 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 99878 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 99937 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99938 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 99997 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 99998 ttcccgtagtagcggcgagcgaaatggg 100025
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119840 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 119781 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 119780 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 119721 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119720 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 119661 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 119660 ttcccgtagtagcggcgagcgaaatggg 119633 Score = 404 bits (204), Expect = e-110 Identities = 207/208 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95199 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 95258 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 95259 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 95318 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95319 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 95378 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 95379 ttcccgtagtagcggcgagcgaaatggg 95406
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 396 bits (200), Expect = e-107 Identities = 206/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242095 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 9242036 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9242035 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 9241976 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241975 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 9241916 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||||||||||| |||||||||||||| Sbjct: 9241915 ttcccgtagtagcagcgagcgaaatggg 9241888 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 139 actgaaacatcttagtagccagaggaaaagaaag 172 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 396 bits (200), Expect = e-107 Identities = 206/208 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53308 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 53249 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 53248 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 53189 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53188 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 53129 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||||||||||| |||||||||||||| Sbjct: 53128 ttcccgtagtagcagcgagcgaaatggg 53101
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 392 bits (198), Expect = e-106 Identities = 201/202 (99%) Strand = Plus / Plus Query: 8 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 68 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 127 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 128 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 188 tagtagcggcgagcgaaatggg 209 |||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatggg 202
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 389 bits (196), Expect = e-105 Identities = 205/208 (98%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123430 cagagatgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcata 123371 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 123370 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 123311 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123310 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 123251 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 123250 ttcccgtagtagcggcgagcgaaatggg 123223
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 389 bits (196), Expect = e-105 Identities = 205/208 (98%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12825971 cagagatgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcata 12825912 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 12825911 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 12825852 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825851 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 12825792 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 12825791 ttcccgtagtagcggcgagcgaaatggg 12825764
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 383 bits (193), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcat 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123636 cagagacgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcat 123577 Query: 61 agatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 123576 agatccggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcagg 123517 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123516 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 123457 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 123456 attcccgtagtagcggcgagcgaaatggg 123428 Score = 383 bits (193), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcat 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99101 cagagacgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcat 99160 Query: 61 agatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 99161 agatccggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcagg 99220 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99221 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 99280 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 99281 attcccgtagtagcggcgagcgaaatggg 99309
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 383 bits (193), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcat 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5454 cagagacgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcat 5513 Query: 61 agatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 5514 agatccggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcagg 5573 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5574 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 5633 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 5634 attcccgtagtagcggcgagcgaaatggg 5662
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 383 bits (193), Expect = e-103 Identities = 206/209 (98%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcat 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42 cagagacgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcat 101 Query: 61 agatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 102 agatccggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcagg 161 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 221 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 222 attcccgtagtagcggcgagcgaaatggg 250
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 377 bits (190), Expect = e-101 Identities = 193/194 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75806 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 75865 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 75866 gatccggagattcccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggc 75925 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75926 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 75985 Query: 182 ttcccgtagtagcg 195 |||||||||||||| Sbjct: 75986 ttcccgtagtagcg 75999 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ggcgaactgaaacatcttag 153 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 365 bits (184), Expect = 4e-98 Identities = 187/188 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75672 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 75613 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75612 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 75553 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75552 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 75493 Query: 182 ttcccgta 189 |||||||| Sbjct: 75492 ttcccgta 75485 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 116 gcaggcaagagacaacctggcgaactgaaacatcttagta 155 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Minus Query: 185 ccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatggg 75454
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 365 bits (184), Expect = 4e-98 Identities = 187/188 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381866 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 381925 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 381926 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 381985 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381986 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 382045 Query: 182 ttcccgta 189 |||||||| Sbjct: 382046 ttcccgta 382053 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 116 gcaggcaagagacaacctggcgaactgaaacatcttagta 155 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 116 gcaggcaagagacaacctggcgaactgaaacatcttagta 155 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Plus Query: 185 ccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatggg 382084
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 365 bits (184), Expect = 4e-98 Identities = 187/188 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113763 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 113704 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113703 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 113644 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113643 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 113584 Query: 182 ttcccgta 189 |||||||| Sbjct: 113583 ttcccgta 113576 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 116 gcaggcaagagacaacctggcgaactgaaacatcttagta 155 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Minus Query: 185 ccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatggg 113545
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 365 bits (184), Expect = 4e-98 Identities = 187/188 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368445 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 368386 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 368385 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 368326 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368325 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 368266 Query: 182 ttcccgta 189 |||||||| Sbjct: 368265 ttcccgta 368258 Score = 365 bits (184), Expect = 4e-98 Identities = 187/188 (99%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185050 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 184991 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184990 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 184931 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184930 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 184871 Query: 182 ttcccgta 189 |||||||| Sbjct: 184870 ttcccgta 184863 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 116 gcaggcaagagacaacctggcgaactgaaacatcttagta 155 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Minus Query: 185 ccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatggg 368227 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Minus Query: 185 ccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatggg 184832
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 365 bits (184), Expect = 4e-98 Identities = 203/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139546 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 139487 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 139486 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 139428 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139427 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 139368 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 139367 ttcccgtagtagcggcgagcgaaatggg 139340 Score = 365 bits (184), Expect = 4e-98 Identities = 203/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110399 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 110458 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 110459 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 110517 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110518 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 110577 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 110578 ttcccgtagtagcggcgagcgaaatggg 110605
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 365 bits (184), Expect = 4e-98 Identities = 203/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136551 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 136492 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 136491 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 136433 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136432 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136373 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 136372 ttcccgtagtagcggcgagcgaaatggg 136345 Score = 365 bits (184), Expect = 4e-98 Identities = 203/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105874 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 105933 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 105934 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 105992 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105993 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 106052 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 106053 ttcccgtagtagcggcgagcgaaatggg 106080
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 365 bits (184), Expect = 4e-98 Identities = 203/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134183 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 134124 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 134123 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 134065 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134064 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 134005 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 134004 ttcccgtagtagcggcgagcgaaatggg 133977 Score = 365 bits (184), Expect = 4e-98 Identities = 203/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103788 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 103847 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 103848 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 103906 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103907 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 103966 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 103967 ttcccgtagtagcggcgagcgaaatggg 103994
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 132735 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 132676 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||| Sbjct: 132675 gatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggc 132617 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132616 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 132557 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 132556 ttcccgtagtagcggcgagcgaaatggg 132529 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104143 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 104202 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||| Sbjct: 104203 gatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggc 104261 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104262 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 104321 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 104322 ttcccgtagtagcggcgagcgaaatggg 104349
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131627 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 131568 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||| Sbjct: 131567 gatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggc 131509 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131508 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 131449 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 131448 ttcccgtagtagcggcgagcgaaatggg 131421 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103008 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 103067 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||| Sbjct: 103068 gatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggc 103126 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103127 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 103186 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 103187 ttcccgtagtagcggcgagcgaaatggg 103214
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 140320 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 140261 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 140260 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 140202 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140201 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 140142 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 140141 ttcccgtagtagcggcgagcgaaatggg 140114 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 109740 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 109799 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 109800 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 109858 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109859 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 109918 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 109919 ttcccgtagtagcggcgagcgaaatggg 109946
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142068 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 142009 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||| Sbjct: 142008 gatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggc 141950 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141949 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 141890 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 141889 ttcccgtagtagcggcgagcgaaatggg 141862 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111589 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 111648 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||| Sbjct: 111649 gatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggc 111707 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111708 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 111767 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 111768 ttcccgtagtagcggcgagcgaaatggg 111795
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134941 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 134882 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 134881 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 134823 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134822 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 134763 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 134762 ttcccgtagtagcggcgagcgaaatggg 134735 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105341 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 105400 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 105401 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 105459 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105460 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 105519 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 105520 ttcccgtagtagcggcgagcgaaatggg 105547
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 37 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 96 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 97 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 155 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 156 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 215 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 216 ttcccgtagtagcggcgagcgaaatggg 243
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127824 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 127765 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 127764 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 127706 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127705 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 127646 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 127645 ttcccatagtagcggcgagcgaaatggg 127618 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107098 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 107157 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 107158 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 107216 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107217 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 107276 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 107277 ttcccatagtagcggcgagcgaaatggg 107304
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 132728 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 132669 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||| Sbjct: 132668 gatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggc 132610 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132609 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 132550 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 132549 ttcccgtagtagcggcgagcgaaatggg 132522 Score = 357 bits (180), Expect = 9e-96 Identities = 202/208 (97%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104141 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 104200 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||| Sbjct: 104201 gatccggagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggc 104259 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104260 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 104319 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 104320 ttcccgtagtagcggcgagcgaaatggg 104347
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 135864 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgta 135805 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 135804 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 135746 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135745 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 135686 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 135685 ttcccgtagtagcggcgagcgaaatggg 135658 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 106045 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgta 106104 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 106105 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 106163 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106164 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 106223 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 106224 ttcccgtagtagcggcgagcgaaatggg 106251
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 39 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 98 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 99 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggc 157 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 217 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 218 ttcccgtagtagcggcgagcgaaatggg 245
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 132958 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 132899 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 132898 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggc 132840 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132839 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 132780 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 132779 ttcccgtagtagcggcgagcgaaatggg 132752 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 103806 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 103865 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 103866 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggc 103924 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103925 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 103984 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 103985 ttcccgtagtagcggcgagcgaaatggg 104012
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 48 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 107 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 108 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 166 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 167 aagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 226 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 227 ttcccgtagtagcggcgagcgaaatggg 254
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 48 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 107 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 108 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 166 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 167 aagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 226 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 227 ttcccgtagtagcggcgagcgaaatggg 254
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 48 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 107 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 108 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 166 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 167 aagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 226 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 227 ttcccgtagtagcggcgagcgaaatggg 254
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 48 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 107 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 108 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 166 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 167 aagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 226 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 227 ttcccgtagtagcggcgagcgaaatggg 254
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 48 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 107 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 108 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 166 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 167 aagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 226 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 227 ttcccgtagtagcggcgagcgaaatggg 254
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 136140 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgta 136081 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 136080 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 136022 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136021 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 135962 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 135961 ttcccgtagtagcggcgagcgaaatggg 135934 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || Sbjct: 106267 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgta 106326 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 106327 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 106385 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106386 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 106445 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 106446 ttcccgtagtagcggcgagcgaaatggg 106473
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 133919 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 133860 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 133859 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggc 133801 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133800 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 133741 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 133740 ttcccgtagtagcggcgagcgaaatggg 133713 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 104730 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 104789 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 104790 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggc 104848 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104849 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 104908 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 104909 ttcccgtagtagcggcgagcgaaatggg 104936
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 139673 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 139614 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 139613 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 139555 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139554 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 139495 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 139494 ttcccgtagtagcggcgagcgaaatggg 139467 Score = 349 bits (176), Expect = 2e-93 Identities = 201/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 109626 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 109685 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 109686 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 109744 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109745 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 109804 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 109805 ttcccgtagtagcggcgagcgaaatggg 109832
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 15 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 74 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 75 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 133 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 193 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 194 ttcccgtagtagcggcgagcgaaatggg 221
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 136260 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 136201 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 136200 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 136142 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136141 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136082 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 136081 ttcccgtagtagcggcgagcgaaatggg 136054 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 106370 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 106429 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 106430 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 106488 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106489 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 106548 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 106549 ttcccgtagtagcggcgagcgaaatggg 106576
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 136898 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 136839 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 136838 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 136780 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136779 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136720 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 136719 ttcccgtagtagcggcgagcgaaatggg 136692 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 106659 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 106718 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 106719 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 106777 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106778 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 106837 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 106838 ttcccgtagtagcggcgagcgaaatggg 106865
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 1564 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 1623 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 1624 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 1682 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1683 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 1742 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 1743 ttcccgtagtagcggcgagcgaaatggg 1770
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 135506 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 135447 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 135446 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 135388 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135387 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 135328 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 135327 ttcccgtagtagcggcgagcgaaatggg 135300 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 105530 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 105589 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 105590 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 105648 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105649 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 105708 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 105709 ttcccgtagtagcggcgagcgaaatggg 105736
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| || Sbjct: 48 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggggttgaaaataagcgta 107 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 108 gatccggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggc 166 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 167 aagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 226 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 227 ttcccgtagtagcggcgagcgaaatggg 254
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 135641 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 135582 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 135581 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 135523 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135522 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 135463 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 135462 ttcccgtagtagcggcgagcgaaatggg 135435 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 105702 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 105761 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 105762 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 105820 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105821 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 105880 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 105881 ttcccgtagtagcggcgagcgaaatggg 105908
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 135639 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 135580 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 135579 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 135521 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135520 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 135461 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 135460 ttcccgtagtagcggcgagcgaaatggg 135433 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 105699 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 105758 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 105759 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 105817 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105818 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 105877 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 105878 ttcccgtagtagcggcgagcgaaatggg 105905
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 135551 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 135492 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 135491 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 135433 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135432 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 135373 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 135372 ttcccgtagtagcggcgagcgaaatggg 135345 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 105577 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 105636 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 105637 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 105695 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105696 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 105755 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 105756 ttcccgtagtagcggcgagcgaaatggg 105783
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 17 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 76 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||| |||||| Sbjct: 77 gatccggagattcccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggc 135 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 136 aagagacaacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcga 195 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 196 ttcccgtagtagcggcgagcgaaatggg 223
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 136258 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 136199 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 136198 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 136140 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136139 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 136080 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 136079 ttcccgtagtagcggcgagcgaaatggg 136052 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 106368 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 106427 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 106428 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 106486 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106487 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 106546 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 106547 ttcccgtagtagcggcgagcgaaatggg 106574
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130495 cagagacgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 130436 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||| | ||||||||||||| |||||| Sbjct: 130435 gatccggagattcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggc 130377 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130376 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 130317 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 130316 ttcccgtagtagcggcgagcgaaatggg 130289 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 101961 cagagacgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 102020 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||| | ||||||||||||| |||||| Sbjct: 102021 gatccggagattcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggc 102079 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102080 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 102139 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 102140 ttcccgtagtagcggcgagcgaaatggg 102167
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 135518 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 135459 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 135458 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 135400 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135399 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 135340 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 135339 ttcccgtagtagcggcgagcgaaatggg 135312 Score = 341 bits (172), Expect = 5e-91 Identities = 200/208 (96%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 105544 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 105603 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 105604 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 105662 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105663 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 105722 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 105723 ttcccgtagtagcggcgagcgaaatggg 105750
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 139464 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 139405 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||| | Sbjct: 139404 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagac 139346 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139345 aagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcga 139286 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 139285 ttcccgtagtagcggcgagcgaaatggg 139258 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 109633 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 109692 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||| | Sbjct: 109693 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagac 109751 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 109752 aagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcga 109811 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 109812 ttcccgtagtagcggcgagcgaaatggg 109839
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4271 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 4330 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| ||||||| ||||||||||||||| |||||| |||||||| || |||||||| Sbjct: 4331 gatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggc 4389 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4390 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 4449 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 4450 ttcccgtagtagcggcgagcgaaatggg 4477
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 142839 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgca 142780 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||| Sbjct: 142779 gatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggc 142721 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142720 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 142661 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 142660 ttcccgtagtagcggcgagcgaaatggg 142633 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 110489 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgca 110548 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||| Sbjct: 110549 gatccggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggc 110607 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110608 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 110667 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 110668 ttcccgtagtagcggcgagcgaaatggg 110695
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 89 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 148 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||| | Sbjct: 149 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagac 207 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 208 aagagacaacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcga 267 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 268 ttcccgtagtagcggcgagcgaaatggg 295
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2084 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcata 2143 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||| Sbjct: 2144 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggc 2202 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2203 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 2262 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 2263 ttcccatagtagcggcgagcgaaatggg 2290
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 23654 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 23595 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| ||||||| ||||||||||||||| |||||| |||||||| || |||||||| Sbjct: 23594 gatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggc 23536 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23535 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 23476 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 23475 ttcccgtagtagcggcgagcgaaatggg 23448
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 41 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcata 100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||| ||| |||||||| |||||| |||||||| ||| |||||| Sbjct: 101 gatccggagattcccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggc 159 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 219 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 220 ttcccgtagtagcggcgagcgaaatggg 247
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 79730 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 79671 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| ||||||| ||||||||||||||| |||||| |||||||| || |||||||| Sbjct: 79670 gatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggc 79612 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79611 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 79552 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 79551 ttcccgtagtagcggcgagcgaaatggg 79524
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118109 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcata 118050 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||| Sbjct: 118049 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggc 117991 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117990 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 117931 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 117930 ttcccatagtagcggcgagcgaaatggg 117903 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 89993 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcata 90052 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||| Sbjct: 90053 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggc 90111 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 90171 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 90172 ttcccatagtagcggcgagcgaaatggg 90199
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 135989 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 135930 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||| ||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 135929 gatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 135871 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135870 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 135811 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 135810 ttcccgtagtagcggcgagcgaaatggg 135783 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 106149 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 106208 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||| ||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 106209 gatccggggattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 106267 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106268 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 106327 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 106328 ttcccgtagtagcggcgagcgaaatggg 106355
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4540 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 4599 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| ||||||| ||||||||||||||| |||||| |||||||| || |||||||| Sbjct: 4600 gatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggc 4658 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4659 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 4718 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 4719 ttcccgtagtagcggcgagcgaaatggg 4746
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 333 bits (168), Expect = 1e-88 Identities = 199/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4540 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcata 4599 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| ||||||| ||||||||||||||| |||||| |||||||| || |||||||| Sbjct: 4600 gatccgaggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggc 4658 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4659 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 4718 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 4719 ttcccgtagtagcggcgagcgaaatggg 4746
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 327 bits (165), Expect = 8e-87 Identities = 200/209 (95%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 140 cagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 199 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| ||||| |||||||||||||| |||||| Sbjct: 200 gatccggagattcccgaatagggcaacctttcgaactg-ctgctgaatccatgggcaggc 258 Query: 122 aagagacaacctggcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcg 180 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 259 aagagacaacctggcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcg 318 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 319 attcccgtagtagcggcgagcgaaatggg 347
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 327 bits (165), Expect = 8e-87 Identities = 200/209 (95%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 40 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 99 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| |||||||||||||| |||||| Sbjct: 100 gatccggagattcccgaataggtcaacctttcaaactg-ctgctgaatccatgggcaggc 158 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 aagagacaacctaacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 218 Query: 182 ttcccgtagtagc-ggcgagcgaaatggg 209 ||||||||||||| ||||||||||||||| Sbjct: 219 ttcccgtagtagcaggcgagcgaaatggg 247
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 325 bits (164), Expect = 3e-86 Identities = 198/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 131751 cagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcaga 131692 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||| | ||||||||||||| |||||| Sbjct: 131691 gatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggc 131633 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131632 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 131573 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 131572 ttcccgtagtagcggcgagcgaaatggg 131545 Score = 325 bits (164), Expect = 3e-86 Identities = 198/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 101694 cagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcaga 101753 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||| | ||||||||||||| |||||| Sbjct: 101754 gatccggagattcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggc 101812 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101813 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 101872 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 101873 ttcccgtagtagcggcgagcgaaatggg 101900
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 325 bits (164), Expect = 3e-86 Identities = 198/208 (95%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 46292 cagagacgaagaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcata 46351 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||| Sbjct: 46352 gatccggagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggc 46410 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 46411 aagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcga 46470 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 46471 ttcccgtagtagcggcgagcgaaatggg 46498
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 317 bits (160), Expect = 8e-84 Identities = 197/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 116169 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtata 116110 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| ||||||| ||||||| |||||||| ||| |||| | Sbjct: 116109 gatccggagattcccgaataggttaacctttgaaactgc-tgctgaattcataggcagac 116051 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116050 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 115991 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||| |||||||||||||||||||||||| Sbjct: 115990 ttctcgtagtagcggcgagcgaaatggg 115963 Score = 317 bits (160), Expect = 8e-84 Identities = 197/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 85951 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtata 86010 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| ||||||| ||||||| |||||||| ||| |||| | Sbjct: 86011 gatccggagattcccgaataggttaacctttgaaactgc-tgctgaattcataggcagac 86069 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86070 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 86129 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||| |||||||||||||||||||||||| Sbjct: 86130 ttctcgtagtagcggcgagcgaaatggg 86157
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 317 bits (160), Expect = 8e-84 Identities = 197/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||| Sbjct: 86302 cagagacgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaaaatgagcata 86361 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||| ||| |||||| ||||||||||||| |||||| Sbjct: 86362 gatccggagattcccgaataggttaacccttttaactgc-tgctgaatccatgggcaggc 86420 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86421 aagagacaacctggcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcga 86480 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||| ||||||||||||||| Sbjct: 86481 ttcccgtagtagtggcgagcgaaatggg 86508
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 317 bits (160), Expect = 8e-84 Identities = 197/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||| Sbjct: 88388 cagagacgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaaaattagcata 88447 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| ||||| ||||||||||||| |||||| Sbjct: 88448 gatccggagattcccgaataggttaacctttttcactgc-tgctgaatccatgggcaggc 88506 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 88507 aagagacaacctggtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcga 88566 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 88567 ttcccgtagtagcggcgagcgaaatggg 88594
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 311 bits (157), Expect = 5e-82 Identities = 198/209 (94%), Gaps = 2/209 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 131831 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 131772 Query: 62 gatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||| ||||||| | |||||||||||||| |||||| ||||||||||| | ||||| Sbjct: 131771 gatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcagg 131713 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131712 caagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 131653 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 131652 attcccgtagtagcggcgagcgaaatggg 131624 Score = 311 bits (157), Expect = 5e-82 Identities = 198/209 (94%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 103563 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 103622 Query: 62 gatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||| ||||||| | |||||||||||||| |||||| ||||||||||| | ||||| Sbjct: 103623 gatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcagg 103681 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103682 caagagacaacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 103741 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 103742 attcccgtagtagcggcgagcgaaatggg 103770
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 309 bits (156), Expect = 2e-81 Identities = 196/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| Sbjct: 52646 cagagacgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 52587 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| ||||||||| |||||| ||||||||||||| |||| | Sbjct: 52586 gatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagac 52528 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52527 aagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 52468 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 52467 ttcccatagtagcggcgagcgaaatggg 52440 Score = 309 bits (156), Expect = 2e-81 Identities = 196/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| Sbjct: 37182 cagagacgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 37241 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| ||||||||| |||||| ||||||||||||| |||| | Sbjct: 37242 gatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagac 37300 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37301 aagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 37360 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 37361 ttcccatagtagcggcgagcgaaatggg 37388
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 309 bits (156), Expect = 2e-81 Identities = 196/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 48 cagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccga 107 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||| | ||||||||||||| |||||| Sbjct: 108 gatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggc 166 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 226 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 227 ttcccgtagtagcggcgagcgaaatggg 254
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 309 bits (156), Expect = 2e-81 Identities = 196/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 48 cagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccga 107 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||| | ||||||||||||| |||||| Sbjct: 108 gatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggc 166 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 226 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 227 ttcccgtagtagcggcgagcgaaatggg 254
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 309 bits (156), Expect = 2e-81 Identities = 196/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 41 cagagacgaagaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatg 100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||| | Sbjct: 101 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcagac 159 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 219 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 220 ttcccatagtagcggcgagcgaaatggg 247
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 309 bits (156), Expect = 2e-81 Identities = 193/204 (94%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 24 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtata 83 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||||||||| ||||||||||||| || ||| Sbjct: 84 gatccggagattcccgaataggttaaccttttaaactg-ctgctgaatccataggcgggc 142 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 143 aagagacaacctggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcga 202 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||| |||||||||||||||||||| Sbjct: 203 ttctcgtagtagcggcgagcgaaa 226
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 309 bits (156), Expect = 2e-81 Identities = 196/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||| || |||||||||||||||||||||||||||||||| | Sbjct: 536 cagagacgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccga 595 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||| | ||||||||||||| |||||| Sbjct: 596 gatccggagattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggc 654 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 714 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 715 ttcccgtagtagcggcgagcgaaatggg 742
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 309 bits (156), Expect = 2e-81 Identities = 159/160 (99%) Strand = Plus / Plus Query: 50 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 109 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 110 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 170 aagcaaaagcgattcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatggg 160
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 309 bits (156), Expect = 2e-81 Identities = 196/208 (94%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| Sbjct: 4110 cagagacgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 4169 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| ||||||||| |||||| ||||||||||||| |||| | Sbjct: 4170 gatccggagattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagac 4228 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4229 aagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 4288 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 4289 ttcccatagtagcggcgagcgaaatggg 4316
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 303 bits (153), Expect = 1e-79 Identities = 198/209 (94%), Gaps = 3/209 (1%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct: 1807 cagagacgaggaagggcgtagtaatc-acgaaatgcttcggggagttgaaaataagcata 1865 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 1866 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 1924 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa-gcg 180 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1925 aagagacaacctggcgaactgaaccatcttagtagccagaggaaaagaaagcaaaaggcg 1984 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 1985 attcccgtagtagcggcgagcgaaatggg 2013
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 303 bits (153), Expect = 1e-79 Identities = 197/209 (94%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 2639 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 2698 Query: 62 gatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||| ||||||| | |||||||||||||| |||||| ||||||||||| | ||||| Sbjct: 2699 gatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcagg 2757 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2758 caagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 2817 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 2818 attcccgtagtagcggcgagcgaaatggg 2846
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 303 bits (153), Expect = 1e-79 Identities = 197/209 (94%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 894 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 953 Query: 62 gatccggagattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||| ||||||| | |||||||||||||| |||||| ||||||||||| | ||||| Sbjct: 954 gatccggggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcagg 1012 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 caagagacaacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 1072 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 1073 attcccgtagtagcggcgagcgaaatggg 1101
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 3930 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcata 3989 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| || || | || Sbjct: 3990 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagc 4048 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4049 aagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcga 4108 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 4109 ttcccgtagtagcggcgagcgaaatggg 4136
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 146519 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatg 146460 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||| | |||||||| ||| |||||| Sbjct: 146459 gatccggagattcccgaataggttaaccttttgaactac-tgctgaattcataggcaggc 146401 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 146400 gagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcga 146341 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 146340 ttcccgtagtagcggcgagcgaaatggg 146313 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 111943 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatg 112002 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||| | |||||||| ||| |||||| Sbjct: 112003 gatccggagattcccgaataggttaaccttttgaactac-tgctgaattcataggcaggc 112061 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 112062 gagagacaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcga 112121 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 112122 ttcccgtagtagcggcgagcgaaatggg 112149
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 41 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatg 100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| ||||||||||||||| |||||||| ||| || ||| Sbjct: 101 gatccggagattcccgaataggttaaccttttaaactgc-tgctgaattcataggcgggc 159 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 160 aagagacaacccggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcga 219 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||| |||||||||||||||||||||||| Sbjct: 220 ttctcgtagtagcggcgagcgaaatggg 247
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 40 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcata 99 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| || || | || Sbjct: 100 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagc 158 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 159 aagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcga 218 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 219 ttcccgtagtagcggcgagcgaaatggg 246
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 151205 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcata 151146 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| || || | || Sbjct: 151145 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagc 151087 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 151086 aagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcga 151027 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 151026 ttcccgtagtagcggcgagcgaaatggg 150999 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 117461 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcata 117520 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| || || | || Sbjct: 117521 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagc 117579 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117580 aagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcga 117639 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 117640 ttcccgtagtagcggcgagcgaaatggg 117667
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 128406 cagagacgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcata 128347 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||| Sbjct: 128346 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggc 128288 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 128287 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcga 128228 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||| |||| Sbjct: 128227 ttcccgtagtagcggcgagcgaagtggg 128200 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 95041 cagagacgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcata 95100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||| Sbjct: 95101 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggc 95159 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 95160 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcga 95219 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||| |||| Sbjct: 95220 ttcccgtagtagcggcgagcgaagtggg 95247
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 301 bits (152), Expect = 5e-79 Identities = 195/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 40 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcata 99 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||||| |||||| |||||||| || || | || Sbjct: 100 gatccggagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagc 158 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 159 aagagacaacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcga 218 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 219 ttcccgtagtagcggcgagcgaaatggg 246
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 293 bits (148), Expect = 1e-76 Identities = 151/152 (99%) Strand = Plus / Plus Query: 58 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 117 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 118 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 178 gcgattcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatggg 152
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 293 bits (148), Expect = 1e-76 Identities = 194/208 (93%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||| |||||||||||||| || |||||||||||||||||||||||||||| |||||| Sbjct: 177071 cagagaggaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcata 177130 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||| Sbjct: 177131 gatccggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggc 177189 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 177190 aagagagaaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcga 177249 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||| |||||||||| Sbjct: 177250 ttcccgtagtagcggcgggcgaaatggg 177277 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 135 gcgaactgaaacatcttagtagc 157 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 135 gcgaactgaaacatcttagtagc 157 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 291 bits (147), Expect = 5e-76 Identities = 150/151 (99%) Strand = Plus / Plus Query: 59 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 118 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 119 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 179 cgattcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatggg 151
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 285 bits (144), Expect = 3e-74 Identities = 147/148 (99%) Strand = Plus / Plus Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatggg 148
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 280 bits (141), Expect = 2e-72 Identities = 144/145 (99%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1585 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 1644 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1645 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 1704 Query: 122 aagagacaacctggcgaactgaaac 146 ||||||||||||||||||||||||| Sbjct: 1705 aagagacaacctggcgaactgaaac 1729
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 278 bits (140), Expect = 7e-72 Identities = 192/208 (92%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 |||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| Sbjct: 40 cagagacgaggaagggtgtagtaatcgacgaaatgcttcggggagttgaaaataagcata 99 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| |||||||| ||| || ||||||| | ||||| |||| |||||||| ||||| Sbjct: 100 gatccgtagattcccgaatggggtaacctttcacactgc-tgctcaatccatgggcagga 158 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 159 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaataaagcaaaagcga 218 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 219 ttcccatagtagcggcgagcgaaatggg 246
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 1e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 7 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 67 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 126 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 127 acaacctggcgaactgaaacat 148 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 1e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 7 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 67 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 126 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 127 acaacctggcgaactgaaacat 148 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 1e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 7 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 67 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 126 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 127 acaacctggcgaactgaaacat 148 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 1e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 7 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 67 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 126 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 127 acaacctggcgaactgaaacat 148 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 254 bits (128), Expect = 1e-64 Identities = 188/208 (90%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 28 cagagacgaagaagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcatt 87 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||| ||| |||||| ||||| || |||||||||||||| || | |||| Sbjct: 88 gatccggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggc 147 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 207 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| ||||| ||||||||||||||| Sbjct: 208 ttccctgagtagtggcgagcgaaatggg 235
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 254 bits (128), Expect = 1e-64 Identities = 188/208 (90%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 41 cagagacgaagaagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcatt 100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||| ||| |||||| ||||| || |||||||||||||| || | |||| Sbjct: 101 gatccggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggc 160 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 220 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| ||||| ||||||||||||||| Sbjct: 221 ttccctgagtagtggcgagcgaaatggg 248
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 246 bits (124), Expect = 2e-62 Identities = 187/208 (89%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||||||||||||||||||||||||||| || ||| || |||||| Sbjct: 145 cagagacgaagaagggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcatt 204 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||| ||| |||||| ||||| || |||||||||||||| || | |||| Sbjct: 205 gatccggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggc 264 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 324 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| ||||| ||||||||||||||| Sbjct: 325 ttccctgagtagtggcgagcgaaatggg 352
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 246 bits (124), Expect = 2e-62 Identities = 165/176 (93%), Gaps = 2/176 (1%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcat 60 |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| | Sbjct: 89842 cagagacgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgt 89783 Query: 61 agatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 89782 agatccggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcagg 89724 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 176 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89723 caagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 246 bits (124), Expect = 2e-62 Identities = 165/176 (93%), Gaps = 2/176 (1%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcat 60 |||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| | Sbjct: 428 cagagacgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgt 487 Query: 61 agatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 ||||||||||||||| ||||||| |||||||| |||||| ||||||||||||| ||||| Sbjct: 488 agatccggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcagg 546 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 176 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 547 caagagacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 602
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 232 bits (117), Expect = 4e-58 Identities = 170/185 (91%), Gaps = 2/185 (1%) Strand = Plus / Minus Query: 25 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 84 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 85 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 144 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 145 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 204 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 205 atggg 209 ||||| Sbjct: 6334 atggg 6330
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 230 bits (116), Expect = 1e-57 Identities = 138/144 (95%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 66 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 125 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 126 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 186 cgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatggg 370
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 228 bits (115), Expect = 6e-57 Identities = 115/115 (100%) Strand = Plus / Plus Query: 95 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 155 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 115
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 222 bits (112), Expect = 3e-55 Identities = 181/204 (88%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||| |||| |||||||||||||||||||| ||||||| | ||| Sbjct: 143959 cagagacgaagaagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtata 144018 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||| |||||||||||||||| || ||||| | Sbjct: 144019 gatccggagattcccgaataggttaaccttccaaactgcctgctgaattcagaagcagac 144078 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 144079 aagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcga 144138 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| ||||| ||||||| |||| Sbjct: 144139 ttcccctagtaacggcgagtgaaa 144162 Score = 222 bits (112), Expect = 3e-55 Identities = 181/204 (88%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||| |||| |||||||||||||||||||| ||||||| | ||| Sbjct: 88892 cagagacgaagaagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtata 88833 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||| |||||| |||||||||||||||| || ||||| | Sbjct: 88832 gatccggagattcccgaataggttaaccttccaaactgcctgctgaattcagaagcagac 88773 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||| ||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 88772 aagagacaacccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcga 88713 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| ||||| ||||||| |||| Sbjct: 88712 ttcccctagtaacggcgagtgaaa 88689
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 214 bits (108), Expect = 8e-53 Identities = 184/208 (88%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||| |||||||||||||||||||||||| ||||| | ||||| Sbjct: 4074 cagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcata 4133 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||| || |||| || |||||| ||||||||||| || | Sbjct: 4134 gatccggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggat 4192 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4193 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 4252 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| ||||||||||||||||||||| Sbjct: 4253 ttccctgagtagcggcgagcgaaatggg 4280
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 214 bits (108), Expect = 8e-53 Identities = 180/204 (88%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||| | ||||||||||||||||||||||| || || ||||||| Sbjct: 41 cagagacgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcata 100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| ||| ||| |||||| |||||| || ||| | |||||||||||| ||| | Sbjct: 101 gatccgaagacccccgaatagggcaacctcttgtactacttgctgaatccataggcaaga 160 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 aagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 220 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| ||||||||||||||||| Sbjct: 221 ttccctgagtagcggcgagcgaaa 244
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 214 bits (108), Expect = 8e-53 Identities = 184/208 (88%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||| |||||||||||||||||||||||| ||||| | ||||| Sbjct: 41 cagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcata 100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||| || |||| || |||||| ||||||||||| || | Sbjct: 101 gatccggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggat 159 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| ||||||||||||||||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatggg 247
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 214 bits (108), Expect = 8e-53 Identities = 180/204 (88%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||| | ||||||||||||||||||||||| || || ||||||| Sbjct: 125224 cagagacgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcata 125165 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| ||| ||| |||||| |||||| || ||| | |||||||||||| ||| | Sbjct: 125164 gatccgaagacccccgaatagggcaacctcttgtactacttgctgaatccataggcaaga 125105 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125104 aagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 125045 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| ||||||||||||||||| Sbjct: 125044 ttccctgagtagcggcgagcgaaa 125021 Score = 214 bits (108), Expect = 8e-53 Identities = 180/204 (88%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||| | ||||||||||||||||||||||| || || ||||||| Sbjct: 94642 cagagacgaagaagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcata 94701 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| ||| ||| |||||| |||||| || ||| | |||||||||||| ||| | Sbjct: 94702 gatccgaagacccccgaatagggcaacctcttgtactacttgctgaatccataggcaaga 94761 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94762 aagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 94821 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| ||||||||||||||||| Sbjct: 94822 ttccctgagtagcggcgagcgaaa 94845
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 210 bits (106), Expect = 1e-51 Identities = 191/209 (91%), Gaps = 14/209 (6%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 693 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 634 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||||||||| ||| |||| |||||||||||||| |||||| Sbjct: 633 gatccggagattcccgaataggtca--ctt---gactg-ctgctgaatccatg-gcaggc 581 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaa-gcaaaagcg 180 |||||||| || |||| ||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 580 aagagaca--ct-gcga--tga-acatcttagtagccagaggaaaagaaaggcaaaagcg 527 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||| Sbjct: 526 attcccgtagtagcggcgagcgaaatggg 498
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 208 bits (105), Expect = 5e-51 Identities = 108/109 (99%) Strand = Plus / Plus Query: 101 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 160 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 161 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 125
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 206 bits (104), Expect = 2e-50 Identities = 120/124 (96%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 86 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 145 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 146 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 206 tggg 209 |||| Sbjct: 216 tggg 213
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 206 bits (104), Expect = 2e-50 Identities = 183/208 (87%), Gaps = 1/208 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||| |||||||||||||||||||||||| ||||| | ||||| Sbjct: 41 cagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcata 100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| ||| || |||| || |||||| ||||||| ||| || | Sbjct: 101 gatccggagattcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggat 159 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcga 219 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| ||||||||||||||||||||| Sbjct: 220 ttccctgagtagcggcgagcgaaatggg 247
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 184 bits (93), Expect = 8e-44 Identities = 147/165 (89%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||||| || |||||||| ||||||||||| |||||| |||||| Sbjct: 742 cagagacgaagaagggcgtactaaccgacgaaacgcttcggggagctgaaaagaagcatt 801 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||||||| |||||| |||||| || |||| |||||||||| ||| ||||| Sbjct: 802 gatccggagattcccgaatagggcaacctcttgaacttcctgctgaattcataggcagga 861 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaa 166 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 tagagacaacctggcgaactgaaacatcttagtagccagaggaaa 906
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 184 bits (93), Expect = 8e-44 Identities = 182/209 (87%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||| ||||||||||| |||||||||||| ||||| | | || Sbjct: 41 cagagacgaagaagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgta 100 Query: 62 gatccggagattcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcagg 120 ||||||||||||||| ||| || |||| ||| |||||| ||||||| ||| ||| | Sbjct: 101 gatccggagattcccgaatggggtaacccctttgtactgcc-gctgaattcataagcgga 159 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 160 taagagacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcg 219 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 ||| || ||||||||||||||||||||| Sbjct: 220 atttcctgagtagcggcgagcgaaatggg 248
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 176 bits (89), Expect = 2e-41 Identities = 120/129 (93%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 81 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 140 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 141 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 200 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 201 cgaaatggg 209 |||||||| Sbjct: 3576 tgaaatggg 3568 Score = 73.8 bits (37), Expect = 2e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||| ||| |||||||||||||||| | |||||| |||||||| || Sbjct: 3762 cagagacgaggaagggcatagttagcgacgaaatgcttcagagagttgcaaataagcgta 3703 Query: 62 gatccggag 70 |||| |||| Sbjct: 3702 gatcaggag 3694
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 167 bits (84), Expect = 2e-38 Identities = 174/204 (85%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||||| || |||||||| ||| |||| || ||| || |||||| Sbjct: 28 cagagacgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcatt 87 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||| ||| |||||| |||||| || |||| | ||||||| || || | Sbjct: 88 gatccggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggag 147 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 cagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcga 207 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| |||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaa 231
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 167 bits (84), Expect = 2e-38 Identities = 174/204 (85%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||||| || |||||||| ||| |||| || ||| || |||||| Sbjct: 115635 cagagacgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcatt 115576 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||| ||| |||||| |||||| || |||| | ||||||| || || | Sbjct: 115575 gatccggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggag 115516 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 115515 cagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcga 115456 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| |||||||||||||||||| Sbjct: 115455 ttcccttagtagcggcgagcgaaa 115432 Score = 167 bits (84), Expect = 2e-38 Identities = 174/204 (85%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||||| || |||||||| ||| |||| || ||| || |||||| Sbjct: 86353 cagagacgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcatt 86412 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||| ||| |||||| |||||| || |||| | ||||||| || || | Sbjct: 86413 gatccggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggag 86472 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86473 cagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcga 86532 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| |||||||||||||||||| Sbjct: 86533 ttcccttagtagcggcgagcgaaa 86556
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 167 bits (84), Expect = 2e-38 Identities = 173/199 (86%), Gaps = 4/199 (2%) Strand = Plus / Plus Query: 12 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 70 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 71 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 130 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 131 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 191 tagcggcgagcgaaatggg 209 ||| ||||||||||||||| Sbjct: 184 tagtggcgagcgaaatggg 202
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 167 bits (84), Expect = 2e-38 Identities = 174/204 (85%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||| ||||||||||||||||||||||| || || ||| ||| Sbjct: 41 cagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtata 100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| |||||||| |||||| |||||| || ||| |||| ||| ||| | |||| Sbjct: 101 gatccgaagattcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggt 160 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| ||||| | ||||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 161 tagagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcga 220 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| |||||| ||||||||||| Sbjct: 221 ttcccttagtagtggcgagcgaaa 244
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 161 bits (81), Expect = 1e-36 Identities = 179/209 (85%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagc-at 60 ||||||||| ||||||||| | || | |||||||||||||||||| || ||| |||| || Sbjct: 28 cagagacgaagaagggcgtggaaaccaacgaaatgcttcggggagctggaaacaagctat 87 Query: 61 agatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg 120 | |||||||||||||| |||||| |||||| || ||| ||| ||||| ||| ||| Sbjct: 88 a-atccggagattcccgaatagggcaacctcttgtactacctattgaattcatagatagg 146 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| ||| Sbjct: 147 aaagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcg 206 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 |||||| |||||||||||||||||||||| Sbjct: 207 attcccttagtagcggcgagcgaaatggg 235
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 159 bits (80), Expect = 4e-36 Identities = 173/204 (84%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||| |||||||||||||||||||||| || || ||||||| Sbjct: 41 cagagacgaagaagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcata 100 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||| |||||||| |||||| ||||| || ||| |||| |||| || | |||| Sbjct: 101 aatccgaagattcccgaatagggtaacctcttgtactacctgtagaattaataatcaggt 160 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| ||||| | ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 161 tagagaaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcga 220 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| ||||| ||||||||||| Sbjct: 221 ttccctcagtagtggcgagcgaaa 244
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 153 bits (77), Expect = 3e-34 Identities = 173/205 (84%) Strand = Plus / Plus Query: 5 agacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagat 64 |||||| ||||||||| | || |||||||| |||||| |||| || ||| ||||| ||| Sbjct: 24 agacgatgaagggcgtggaaaccgacgaaacgcttcgaggagctggaaacaagcaatgat 83 Query: 65 ccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag 124 ||||||||||| |||||| |||||| || ||| ||| ||||| ||| ||| ||| Sbjct: 84 tcggagattcccgaatagggcaacctcttgtacttccttttgaattcatagaaaggaaag 143 Query: 125 agacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattc 184 |||||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 144 agacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattc 203 Query: 185 ccgtagtagcggcgagcgaaatggg 209 |||||||||||||||||||| |||| Sbjct: 204 ccgtagtagcggcgagcgaactggg 228
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 153 bits (77), Expect = 3e-34 Identities = 95/101 (94%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |||| Sbjct: 24063462 cagagacgaggaaggacgtagcaagagacgaaatgctttggggagttgaaaataatcata 24063403 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcct 102 ||||||||||||||||||||||||||| |||| |||||||| Sbjct: 24063402 gatccggagattcccaaataggtcaacattttgaactgcct 24063362
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 153 bits (77), Expect = 3e-34 Identities = 83/85 (97%) Strand = Plus / Plus Query: 120 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 180 gattcccgtagtagcggcgagcgaa 204 ||||||| ||||||||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaa 231 Score = 67.9 bits (34), Expect = 1e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 3 agagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag 62 |||||||||||||||||| | | ||||||||||||||||||||||| ||| | || || Sbjct: 42 agagacgaggaagggcgtggttaccgacgaaatgcttcggggagttggaaagaggctgag 101 Query: 63 atccggagat 72 |||||||||| Sbjct: 102 atccggagat 111
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 153 bits (77), Expect = 3e-34 Identities = 95/101 (94%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |||| Sbjct: 23991668 cagagacgaggaaggacgtagcaagagacgaaatgctttggggagttgaaaataatcata 23991609 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcct 102 ||||||||||||||||||||||||||| |||| |||||||| Sbjct: 23991608 gatccggagattcccaaataggtcaacattttgaactgcct 23991568
>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 176388 Score = 153 bits (77), Expect = 3e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |||| Sbjct: 23934 cagagacgaggaaggacgtagcaagagacgaaatgctttggggagttgaaaataatcata 23993 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcct 102 ||||||||||||||||||||||||||| |||| |||||||| Sbjct: 23994 gatccggagattcccaaataggtcaacattttgaactgcct 24034
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 151 bits (76), Expect = 1e-33 Identities = 170/199 (85%), Gaps = 3/199 (1%) Strand = Plus / Plus Query: 7 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 66 |||| ||||||||||| ||||||||||||||||||| | || || ||| || | || Sbjct: 449 acgatgaagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaaccc 506 Query: 67 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 126 |||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||| Sbjct: 507 ggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagag 565 Query: 127 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 186 ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 566 acaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattccc 625 Query: 187 gtagtagcggcgagcgaaa 205 |||||| ||||||||||| Sbjct: 626 ttagtagtggcgagcgaaa 644
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 151 bits (76), Expect = 1e-33 Identities = 155/176 (88%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 151 bits (76), Expect = 1e-33 Identities = 172/204 (84%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||| ||| ||||||||||| | |||||| | ||||||||||| || || |||| | Sbjct: 28 cagagtcgatgaagggcgtagttaccgacgatacgcttcggggagctggaatcaagcttt 87 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| |||||||| |||||| ||||||| || ||| |||| ||||| ||| |||| Sbjct: 88 gatccgaagattcccgaatagggcaaccttatatacttcctgttgaattcatagacaggt 147 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||| |||||| |||||||||||||||||| | ||||||||||||||| |||| Sbjct: 148 aagagacaacccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcga 207 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| |||||| ||||||||||| Sbjct: 208 ttcccttagtagtggcgagcgaaa 231
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 151 bits (76), Expect = 1e-33 Identities = 172/204 (84%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||| |||||||||||||||| |||||| || || ||| ||| Sbjct: 3075 cagagacgaagaagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtata 3134 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| |||||||| |||||| |||||| || ||| |||| ||| ||| |||| Sbjct: 3135 gatccgaagattcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggt 3194 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| ||||| | ||||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 3195 tagagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcga 3254 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| |||||| ||||||||||| Sbjct: 3255 ttcccttagtagtggcgagcgaaa 3278
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 151 bits (76), Expect = 1e-33 Identities = 172/204 (84%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||||| ||||||||||||||||||||||| || || ||| ||| Sbjct: 1808 cagagacgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtata 1867 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||| |||||||| |||||| ||||| || ||| |||| |||| || | |||| Sbjct: 1868 aatccgaagattcccgaatagggtaacctcttgtactacctgtataatcaataatcaggt 1927 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| ||||| | ||||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 1928 tagagaaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcga 1987 Query: 182 ttcccgtagtagcggcgagcgaaa 205 ||||| |||||| ||||||||||| Sbjct: 1988 ttcccttagtagtggcgagcgaaa 2011
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 149 bits (75), Expect = 4e-33 Identities = 153/175 (87%), Gaps = 3/175 (1%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 90 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 91 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 150 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 151 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaa 239
>gb|AF141148.1|AF141148 Vigna unguiculata clone VU53KNF3-2 16S ribsomal RNA gene; partial sequence, tRNA-Ile gene; complete sequence, and 18S ribosomal RNA gene; partial sequence; chloroplast genes for chloroplast products Length = 387 Score = 149 bits (75), Expect = 4e-33 Identities = 104/111 (93%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 118 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 59 Query: 62 gatccggagattccc-aaataggtcaaccttttaaactgcctgctgaatcc 111 ||||||||||||||| | |||||||||||||| ||||| ||||||||||| Sbjct: 58 gatccggagattcccgatataggtcaacctttcgaactg-ctgctgaatcc 9
>gb|AF142335.1|AF142335 Vigna vexillata clone TVBA27 putative ribosomal RNA genomic sequence Length = 383 Score = 149 bits (75), Expect = 4e-33 Identities = 104/111 (93%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 112 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 53 Query: 62 gatccggagattccc-aaataggtcaaccttttaaactgcctgctgaatcc 111 ||||||||||||||| | |||||||||||||| ||||| ||||||||||| Sbjct: 52 gatccggagattcccgatataggtcaacctttcgaactg-ctgctgaatcc 3
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 143 bits (72), Expect = 3e-31 Identities = 154/176 (87%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaa 240
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 143 bits (72), Expect = 3e-31 Identities = 84/88 (95%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 147 agagaaaacctggtgaactgaaacatctcagtagccagaggaaaagaaagcaaaagcgat 206 Query: 183 tcccgtagtagcggcgagcgaaatgggg 210 ||||||||||||||||||||||| |||| Sbjct: 207 tcccgtagtagcggcgagcgaaacgggg 234
>gb|AF141147.1|AF141147 Vigna unguiculata clone VU53KNF3-1 16S ribosomal RNA gene, and 18S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 370 Score = 143 bits (72), Expect = 3e-31 Identities = 88/92 (95%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 118 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 59 Query: 62 gatccggagattccc-aaataggtcaaccttt 92 ||||||||||||||| | |||||||||||||| Sbjct: 58 gatccggagattcccgatataggtcaaccttt 27
>emb|X00012.1|CHSORN1 Spirodela oligorhiza chloroplast 5' end of gene for 23S rRNA Length = 200 Score = 141 bits (71), Expect = 1e-30 Identities = 80/83 (96%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 118 cagagacgaggaagggcgtagtaagcgacgaaatgcttcgtggagttgaaaataagcata 177 Query: 62 gatccggagattcccaaataggt 84 ||||||||||||||| ||||||| Sbjct: 178 gatccggagattcccgaataggt 200
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 137 bits (69), Expect = 2e-29 Identities = 145/164 (88%), Gaps = 6/164 (3%) Strand = Plus / Plus Query: 31 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 89 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 90 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 149 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 150 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 193 |||||||||||||||||| |||||||||| |||||| |||||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtag 226
>gb|AF141154.1|AF141154 Vigna unguiculata clone VU124NBS4 ribosomal RNA operon, partial sequence Length = 370 Score = 137 bits (69), Expect = 2e-29 Identities = 107/117 (91%), Gaps = 2/117 (1%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || Sbjct: 254 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaatcagcgta 313 Query: 62 gatccggagattccc-aaataggtcaaccttttaaactgcctgctgaatccatgagc 117 ||||||||||||||| | |||||||||||||| ||||| |||||||| ||| |||| Sbjct: 314 gatccggagattcccgatataggtcaacctttcgaactg-ctgctgaacccacgagc 369
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 137 bits (69), Expect = 2e-29 Identities = 78/81 (96%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 1911 aacctggcgaactgaaacatcttagtaaccagaggaaaataaagcaaaagcgattccctt 1970 Query: 189 agtagcggcgagcgaaatggg 209 ||||||||||||||||||||| Sbjct: 1971 agtagcggcgagcgaaatggg 1991
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 135 bits (68), Expect = 6e-29 Identities = 74/76 (97%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 188152 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 188211 Query: 189 agtagcggcgagcgaa 204 |||||||||||||||| Sbjct: 188212 agtagcggcgagcgaa 188227 Score = 135 bits (68), Expect = 6e-29 Identities = 74/76 (97%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 149709 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 149768 Query: 189 agtagcggcgagcgaa 204 |||||||||||||||| Sbjct: 149769 agtagcggcgagcgaa 149784 Score = 46.1 bits (23), Expect = 0.045 Identities = 50/59 (84%) Strand = Plus / Plus Query: 12 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 70 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188035 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 188093 Score = 46.1 bits (23), Expect = 0.045 Identities = 50/59 (84%) Strand = Plus / Plus Query: 12 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 70 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 149592 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 149650
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 135 bits (68), Expect = 6e-29 Identities = 74/76 (97%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 189075 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 189134 Query: 189 agtagcggcgagcgaa 204 |||||||||||||||| Sbjct: 189135 agtagcggcgagcgaa 189150 Score = 135 bits (68), Expect = 6e-29 Identities = 74/76 (97%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150502 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 150561 Query: 189 agtagcggcgagcgaa 204 |||||||||||||||| Sbjct: 150562 agtagcggcgagcgaa 150577 Score = 46.1 bits (23), Expect = 0.045 Identities = 50/59 (84%) Strand = Plus / Plus Query: 12 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 70 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 188958 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 189016 Score = 46.1 bits (23), Expect = 0.045 Identities = 50/59 (84%) Strand = Plus / Plus Query: 12 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggag 70 ||||||||| || | |||||||| ||| ||||||| || || ||||| ||||||||||| Sbjct: 150385 gaagggcgtggctaccgacgaaacgctccggggagctggaagtaagcttagatccggag 150443
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 133 bits (67), Expect = 2e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 3 agagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag 62 |||||||| ||||||||| | | |||||| | ||| ||||||| || || ||||| | | Sbjct: 29 agagacgaagaagggcgtcactaccgacgatacgctccggggagctggaagtaagcttcg 88 Query: 63 atccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggca 122 |||||||||||||| ||| || |||||| ||| |||||||||| ||| ||||| Sbjct: 89 atccggagattcccgaatggggcaacctcaaggactccctgctgaattcataggcagggt 148 Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||| |||| || |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 149 agaggaaacccggtgaactgaaacatcttagtagccggaggaaaagaaagcaaacgcgat 208 Query: 183 tcccgtagtagcggcgagcgaaa 205 |||| |||||||||||||||||| Sbjct: 209 tcccttagtagcggcgagcgaaa 231
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 133 bits (67), Expect = 2e-28 Identities = 151/179 (84%) Strand = Plus / Plus Query: 27 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 86 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 87 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 146 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 147 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaa 223
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 129 bits (65), Expect = 4e-27 Identities = 74/77 (96%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 148 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 207 Query: 189 agtagcggcgagcgaaa 205 ||||||||||||||||| Sbjct: 208 agtagcggcgagcgaaa 224 Score = 54.0 bits (27), Expect = 2e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 3 agagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag 62 |||| ||| ||||||||| | || | |||||||||||||||||| || ||| |||| | Sbjct: 22 agagtcgatgaagggcgtggaaaccaacgaaatgcttcggggagctggaaacaagctacg 81 Query: 63 atccggagattcccaaataggtcaacc 89 |||||||||||||| ||| || ||||| Sbjct: 82 atccggagattcccgaatggggcaacc 108
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 129 bits (65), Expect = 4e-27 Identities = 74/77 (96%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 2029 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 2088 Query: 189 agtagcggcgagcgaaa 205 ||||||||||||||||| Sbjct: 2089 agtagcggcgagcgaaa 2105 Score = 54.0 bits (27), Expect = 2e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 3 agagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag 62 |||| ||| ||||||||| | || | |||||||||||||||||| || ||| |||| | Sbjct: 1903 agagtcgatgaagggcgtggaaaccaacgaaatgcttcggggagctggaaacaagctacg 1962 Query: 63 atccggagattcccaaataggtcaacc 89 |||||||||||||| ||| || ||||| Sbjct: 1963 atccggagattcccgaatggggcaacc 1989
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 129 bits (65), Expect = 4e-27 Identities = 74/77 (96%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 189 agtagcggcgagcgaaa 205 ||||| ||||||||||| Sbjct: 185 agtagtggcgagcgaaa 201 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcgg 42 ||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 2 cagagacgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||| ||||||||||||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatggg 156051 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 |||||| ||||||||||||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatggg 77841 Score = 46.1 bits (23), Expect = 0.045 Identities = 77/95 (81%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||| || | || ||| | ||||||||||| || || |||||| Sbjct: 156261 cagagacgatgaagggcgcagataccggcgatacgcttcggggagctggtaacaagcatc 156202 Query: 62 gatccggagattcccaaataggtcaaccttttaaa 96 |||||| |||| ||| |||||| |||||| ||||| Sbjct: 156201 gatccgaagatccccgaatagggcaacctcttaaa 156167 Score = 46.1 bits (23), Expect = 0.045 Identities = 77/95 (81%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||| || | || ||| | ||||||||||| || || |||||| Sbjct: 77631 cagagacgatgaagggcgcagataccggcgatacgcttcggggagctggtaacaagcatc 77690 Query: 62 gatccggagattcccaaataggtcaaccttttaaa 96 |||||| |||| ||| |||||| |||||| ||||| Sbjct: 77691 gatccgaagatccccgaatagggcaacctcttaaa 77725
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||| |||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggg 235
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||| |||| Sbjct: 208 ttcccgtagtagcggcgagcgaactggg 235
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 127 bits (64), Expect = 2e-26 Identities = 172/208 (82%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||| || | || ||||| ||||||||||| || || |||| | Sbjct: 39 cagagacgatgaagggcgcagataccggcgaaacgcttcggggagctggcaacaagcttt 98 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| |||||||| |||||| |||||| ||||||| ||| ||| ||| ||| Sbjct: 99 gatccgaagattcccgaatagggcaacctattaaacttcctatacaattcatatttagga 158 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| |||| | |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 159 aagagagaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcga 218 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||| |||| Sbjct: 219 ttcccgtagtagcggcgagcgaactggg 246
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 118 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 177 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 178 gcgattcccgtagtagcggcgagcgaaa 205 ||||||||| |||||||||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaa 224
>gb|AY690322.1| Citrus meyeri tRNA-Ala (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 127 bits (64), Expect = 2e-26 Identities = 70/72 (97%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 72 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 13 Query: 62 gatccggagatt 73 |||||||||||| Sbjct: 12 gatccggagatt 1
>gb|AY690321.1| Citrus reticulata tRNA-tRNA (trnA) gene, complete sequence; and tRNA-Ile (trnI) gene, partial sequence; chloroplast Length = 1322 Score = 127 bits (64), Expect = 2e-26 Identities = 70/72 (97%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 72 cagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgta 13 Query: 62 gatccggagatt 73 |||||||||||| Sbjct: 12 gatccggagatt 1
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 127 bits (64), Expect = 2e-26 Identities = 172/208 (82%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||| || | || ||||| ||||||||||| || || |||| | Sbjct: 39 cagagacgatgaagggcgcagataccggcgaaacgcttcggggagctggcaacaagcttt 98 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| |||||||| |||||| |||||| ||||||| ||| ||| ||| ||| Sbjct: 99 gatccgaagattcccgaatagggcaacctattaaacttcctatacaattcatatttagga 158 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| |||| | |||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 159 aagagagaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcga 218 Query: 182 ttcccgtagtagcggcgagcgaaatggg 209 ||||||||||||||||||||||| |||| Sbjct: 219 ttcccgtagtagcggcgagcgaactggg 246
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 127 bits (64), Expect = 2e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Plus Query: 3 agagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatag 62 |||||||| ||||||||| | || | ||||||||||||| |||| || ||| |||| | Sbjct: 142 agagacgatgaagggcgtggaaaccaacgaaatgcttcgaggagctggaaacaagctatg 201 Query: 63 atccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggca 122 || ||||||||||| |||||| |||||||||| ||| ||| ||||| ||| ||| | Sbjct: 202 attcggagattcccgaatagggcaaccttttatactacctattgaattcatagataggaa 261 Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||||||||| | ||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 262 agagacaacccagtgaag-gaaacatcttagtagctggaggaaaagaaagcaaacgcgat 320 Query: 183 tcccgtagtagcggcgagcgaaat 206 |||| ||||||||||||||||||| Sbjct: 321 tcccttagtagcggcgagcgaaat 344
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 125 bits (63), Expect = 6e-26 Identities = 63/63 (100%) Strand = Plus / Plus Query: 117 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43316 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 43375 Query: 177 agc 179 ||| Sbjct: 43376 agc 43378 Score = 107 bits (54), Expect = 1e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 117 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 174 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40844 caggcaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 40901 Score = 63.9 bits (32), Expect = 2e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 63 atccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggca 122 |||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||| Sbjct: 63009 atccggagattcccgaataggtcaacctttcgaact-actgctgaatccatgggcaggca 62951
>gb|AY155547.1| Cyanothece sp. PCC 8801 23S ribosomal RNA gene, partial sequence Length = 732 Score = 123 bits (62), Expect = 2e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 128 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 187 ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 167 caaccgggcgaactgaaacatcttagtagcccgaggaaaagaaagcaaaagcgattcccc 226 Query: 188 tagtagcggcgagcgaaa 205 ||||||||||||||||| Sbjct: 227 cagtagcggcgagcgaaa 244
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 121 bits (61), Expect = 9e-25 Identities = 73/77 (94%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1692 aacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1751 Query: 189 agtagcggcgagcgaaa 205 ||||||||||||||||| Sbjct: 1752 agtagcggcgagcgaaa 1768
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 121 bits (61), Expect = 9e-25 Identities = 67/69 (97%) Strand = Plus / Plus Query: 141 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 200 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 201 cgaaatggg 209 |||| |||| Sbjct: 220 cgaactggg 228
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 121 bits (61), Expect = 9e-25 Identities = 174/209 (83%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| ||||||||| | || |||||||| ||||||||||| || | | ||| | Sbjct: 28 cagagacgatgaagggcgtggtaaccgacgaaacgcttcggggagctggatacgagcttt 87 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc-agg 120 |||||| |||||||| |||||| |||||| || ||| | | ||||| ||| ||| | | Sbjct: 88 gatccgaagattcccgaatagggcaacctcttggactccttagtgaattcat-agctaag 146 Query: 121 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 180 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| ||| Sbjct: 147 aaagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcg 206 Query: 181 attcccgtagtagcggcgagcgaaatggg 209 |||||| |||||||||||||||||||||| Sbjct: 207 attcccttagtagcggcgagcgaaatggg 235
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 121 bits (61), Expect = 9e-25 Identities = 73/77 (94%) Strand = Plus / Plus Query: 128 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 187 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 188 tagtagcggcgagcgaa 204 |||||||||||||||| Sbjct: 210 cagtagcggcgagcgaa 226
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 121 bits (61), Expect = 9e-25 Identities = 73/77 (94%) Strand = Plus / Plus Query: 128 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 187 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 188 tagtagcggcgagcgaa 204 |||||||||||||||| Sbjct: 223 cagtagcggcgagcgaa 239
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 121 bits (61), Expect = 9e-25 Identities = 73/77 (94%) Strand = Plus / Plus Query: 128 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 187 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 188 tagtagcggcgagcgaa 204 |||||||||||||||| Sbjct: 4797 cagtagcggcgagcgaa 4813
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 121 bits (61), Expect = 9e-25 Identities = 73/77 (94%) Strand = Plus / Minus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 2334657 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagaaaactcgattccctt 2334598 Query: 189 agtagcggcgagcgaaa 205 ||||||||||||||||| Sbjct: 2334597 agtagcggcgagcgaaa 2334581
>gb|AF141151.1|AF141151 Vigna unguiculata clone VU124KNF1-1 16S ribosomal RNA gene, partial sequence and 18S ribosomal RNA gene, partial sequence Length = 345 Score = 121 bits (61), Expect = 9e-25 Identities = 83/89 (93%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 5 agacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagat 64 |||||||||||||||||| |||||||||||||||| |||||||||||||| ||| ||||| Sbjct: 246 agacgaggaagggcgtagtaagcgacgaaatgctttggggagttgaaaatcagcgtagat 305 Query: 65 ccggagattccc-aaataggtcaaccttt 92 |||||||||||| | |||||||||||||| Sbjct: 306 ccggagattcccgatataggtcaaccttt 334
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 121 bits (61), Expect = 9e-25 Identities = 73/77 (94%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | | Sbjct: 1718 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattctctt 1777 Query: 189 agtagcggcgagcgaaa 205 ||||||||||||||||| Sbjct: 1778 agtagcggcgagcgaaa 1794
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 119 bits (60), Expect = 4e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 182 ttcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaa 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 119 bits (60), Expect = 4e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 182 ttcccgtagtagcggcgagcgaaa 205 |||||| ||||||||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaa 223
>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4406 Score = 115 bits (58), Expect = 6e-23 Identities = 76/82 (92%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 183 tcccgtagtagcggcgagcgaa 204 |||||||||||||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaa 240
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 115 bits (58), Expect = 6e-23 Identities = 76/82 (92%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 183 tcccgtagtagcggcgagcgaa 204 |||||||||||||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaa 240
>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1 Length = 1964 Score = 115 bits (58), Expect = 6e-23 Identities = 76/82 (92%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 183 tcccgtagtagcggcgagcgaa 204 |||||||||||||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaa 240
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 115 bits (58), Expect = 6e-23 Identities = 76/82 (92%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 183 tcccgtagtagcggcgagcgaa 204 |||||||||||||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaa 240
>gb|AE012979.1| Thermoanaerobacter tengcongensis MB4, section 6 of 244 of the complete genome Length = 12243 Score = 113 bits (57), Expect = 2e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 9145 aaccgggcgaactgaaacatctaagtagcccgaggaaaagaaagcaaaagcgattcccta 9204 Query: 189 agtagcggcgagcgaaa 205 ||||||||||||||||| Sbjct: 9205 agtagcggcgagcgaaa 9221
>gb|AE012982.1| Thermoanaerobacter tengcongensis MB4, section 9 of 244 of the complete genome Length = 6166 Score = 113 bits (57), Expect = 2e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 1954 aaccgggcgaactgaaacatctaagtagcccgaggaaaagaaagcaaaagcgattcccta 2013 Query: 189 agtagcggcgagcgaaa 205 ||||||||||||||||| Sbjct: 2014 agtagcggcgagcgaaa 2030
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 113 bits (57), Expect = 2e-22 Identities = 72/77 (93%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||| | Sbjct: 149 aacctggtgaattgaaacatcttagtaaccagaggaaaagaaagcaaacgcgattccctt 208 Query: 189 agtagcggcgagcgaaa 205 ||||||||||||||||| Sbjct: 209 agtagcggcgagcgaaa 225
>gb|DQ313018.1| Uncultured bacterium clone 3P12F 23S ribosomal RNA gene, partial sequence Length = 798 Score = 113 bits (57), Expect = 2e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 137 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 196 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 197 cgagcgaaatggg 209 |||||| |||||| Sbjct: 68 cgagcggaatggg 80
>gb|DQ312920.1| Uncultured bacterium clone 3M10C 23S ribosomal RNA gene, partial sequence Length = 798 Score = 113 bits (57), Expect = 2e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 137 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 196 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 197 cgagcgaaatggg 209 |||||| |||||| Sbjct: 68 cgagcggaatggg 80
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 113 bits (57), Expect = 2e-22 Identities = 170/205 (82%), Gaps = 2/205 (0%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||| || | || ||||| ||||||||||| || || |||| | Sbjct: 21 cagagacgatgaagggcgcagataccggcgaaacgcttcggggagctggcaacaagcgtt 80 Query: 62 gatccggagattcccaaataggtcaaccttt-ta-aactgcctgctgaatccatgagcag 119 |||||| |||| |||||||||| |||||| | || |||||||| |||| ||| || Sbjct: 81 gatccgaagatccccaaatagggcaacctctatagaactgcctagagaattcatatttag 140 Query: 120 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 179 | ||||| | ||| || |||||||||||||| ||||||| ||||||||||||||||| || Sbjct: 141 gaaagaggccacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaacgc 200 Query: 180 gattcccgtagtagcggcgagcgaa 204 ||||||||||||||||||||||||| Sbjct: 201 gattcccgtagtagcggcgagcgaa 225
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 111 bits (56), Expect = 9e-22 Identities = 62/64 (96%) Strand = Plus / Plus Query: 141 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 200 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 201 cgaa 204 |||| Sbjct: 224 cgaa 227 Score = 42.1 bits (21), Expect = 0.70 Identities = 72/89 (80%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||| || | || ||||| ||||||||||| || || |||| | Sbjct: 21 cagagacgatgaagggcgcagataccggcgaaacgcttcggggagctggcaacaagcttt 80 Query: 62 gatccggagattcccaaataggtcaacct 90 |||||| |||| ||| |||||| |||||| Sbjct: 81 gatccgaagatccccgaatagggcaacct 109
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 111 bits (56), Expect = 9e-22 Identities = 65/68 (95%) Strand = Plus / Plus Query: 137 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 196 ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 1860 gaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgatttccttagtagcgg 1919 Query: 197 cgagcgaa 204 |||||||| Sbjct: 1920 cgagcgaa 1927
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 109 bits (55), Expect = 4e-21 Identities = 100/115 (86%) Strand = Plus / Minus Query: 91 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 150 |||| ||| ||| |||||| ||| || ||||||||| ||| |||||||||||||||||| Sbjct: 27704 tttatactacctactgaattcataagtaggcaagagctaacttggcgaactgaaacatct 27645 Query: 151 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 205 ||||||||| |||||||||||||||| ||||||| | |||||| ||||| ||||| Sbjct: 27644 tagtagccaaaggaaaagaaagcaaacgcgattctcttagtagtggcgaacgaaa 27590
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 109 bits (55), Expect = 4e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 135 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 194 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 161 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 220 Query: 195 ggcgagcgaaatggg 209 ||||||||||||||| Sbjct: 221 ggcgagcgaaatggg 235
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 109 bits (55), Expect = 4e-21 Identities = 79/87 (90%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 183 tcccgtagtagcggcgagcgaaatggg 209 ||||| ||||||||||||||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatggg 235
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 109 bits (55), Expect = 4e-21 Identities = 79/87 (90%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 183 tcccgtagtagcggcgagcgaaatggg 209 ||||| ||||||||||||||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatggg 235
>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6713 Score = 109 bits (55), Expect = 4e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||| || | || ||||| ||||||||||| || || ||||||| Sbjct: 21 cagagacgatgaagggcgcagataccggcgaaacgcttcggggagctggcaacaagcata 80 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 |||||| |||| ||| |||||| |||||| ||||| || | ||| ||| || || Sbjct: 81 gatccgaagatccccgaatagggcaacctgcaaaactaccaacaaaattcataagttgga 140 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 |||||| |||| | ||| ||||||||||||||||| | ||||||||||||||| |||| Sbjct: 141 aagagagaacccagtgaattgaaacatcttagtagctggtggaaaagaaagcaaacgcga 200 Query: 182 ttcccgtagtagcggcgagcgaa 204 ||||||||||||||||||||||| Sbjct: 201 ttcccgtagtagcggcgagcgaa 223
>gb|L43540.1|DUNCPRRNL Dunaliella parva Length = 5685 Score = 109 bits (55), Expect = 4e-21 Identities = 166/203 (81%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||| || | || ||||| ||| |||||||||| || || | | Sbjct: 21 cagagacgaagaagggcgcagataccggcgaaacgctccggggagttggcaacaaacttt 80 Query: 62 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 121 ||||||||||| ||| |||||| |||||| | |||| || | |||| ||| || || Sbjct: 81 gatccggagatccccgaatagggcaacctgtacaacttccaacagaattcataagttgga 140 Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||| ||||| | ||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 141 aagaggcaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcga 200 Query: 182 ttcccgtagtagcggcgagcgaa 204 ||||||||||||||||||||||| Sbjct: 201 ttcccgtagtagcggcgagcgaa 223
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 109 bits (55), Expect = 4e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 122 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 181 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 182 ttcccgtagtagcggcgagcgaa 204 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 109 bits (55), Expect = 4e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 135 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 194 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 1898 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 1957 Query: 195 ggcgagcgaaatggg 209 ||||||||||||||| Sbjct: 1958 ggcgagcgaaatggg 1972
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 107 bits (54), Expect = 1e-20 Identities = 73/78 (93%), Gaps = 1/78 (1%) Strand = Plus / Minus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc-g 187 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 45899 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 45840 Query: 188 tagtagcggcgagcgaaa 205 |||||| ||||||||||| Sbjct: 45839 tagtagtggcgagcgaaa 45822
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 107 bits (54), Expect = 1e-20 Identities = 82/90 (91%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 116 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 175 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 176 aagcgattcccgtagtagcggcgagcgaaa 205 ||| |||||| |||||| ||||||||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaa 237
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 107 bits (54), Expect = 1e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgat 200 Query: 183 tcccgtagtagcggcgagcgaa 204 ||||||||||| |||||||||| Sbjct: 201 tcccgtagtagtggcgagcgaa 222
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 107 bits (54), Expect = 1e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 183 tcccgtagtagcggcgagcgaa 204 |||||||||||||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaa 221
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 107 bits (54), Expect = 1e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 128 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 187 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 188 tagtagcggcgagcgaaa 205 |||||||||||||||||| Sbjct: 124 tagtagcggcgagcgaaa 141
>gb|DQ001736.1| Eschscholzia californica voucher P.M. McNutt 014 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2694 Score = 107 bits (54), Expect = 1e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 55 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2641 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 2694
>gb|DQ001733.1| Musa acuminata voucher P.M. McNutt 001 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2721 Score = 107 bits (54), Expect = 1e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 55 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2668 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 2721
>gb|DQ001732.1| Lolium perenne voucher P.M. McNutt 018 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2589 Score = 107 bits (54), Expect = 1e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 55 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2536 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 2589
>gb|DQ001731.1| Secale cereale voucher P.M. McNutt 006 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2582 Score = 107 bits (54), Expect = 1e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 55 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2529 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 2582
>dbj|AK061298.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E04, full insert sequence Length = 986 Score = 107 bits (54), Expect = 1e-20 Identities = 54/54 (100%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 55 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaata 85
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 107 bits (54), Expect = 1e-20 Identities = 73/78 (93%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc-g 187 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19480 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 19539 Query: 188 tagtagcggcgagcgaaa 205 |||||| ||||||||||| Sbjct: 19540 tagtagtggcgagcgaaa 19557
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 105 bits (53), Expect = 6e-20 Identities = 74/81 (91%) Strand = Plus / Minus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 183 tcccgtagtagcggcgagcga 203 |||| ||||||||||||||| Sbjct: 171297 tcccccagtagcggcgagcga 171277 Score = 105 bits (53), Expect = 6e-20 Identities = 74/81 (91%) Strand = Plus / Plus Query: 123 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 182 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 183 tcccgtagtagcggcgagcga 203 |||| ||||||||||||||| Sbjct: 121629 tcccccagtagcggcgagcga 121649 Score = 65.9 bits (33), Expect = 5e-08 Identities = 75/89 (84%) Strand = Plus / Minus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||||||||| |||||||| || ||||||| || || |||| Sbjct: 171478 cagagacgaagaagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctct 171419 Query: 62 gatccggagattcccaaataggtcaacct 90 ||||||||||||||| |||||| |||||| Sbjct: 171418 gatccggagattcccgaatagggcaacct 171390 Score = 65.9 bits (33), Expect = 5e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 2 cagagacgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcata 61 ||||||||| |||||||||||||| |||||||| || ||||||| || || |||| Sbjct: 121448 cagagacgaagaagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctct 121507 Query: 62 gatccggagattcccaaataggtcaacct 90 ||||||||||||||| |||||| |||||| Sbjct: 121508 gatccggagattcccgaatagggcaacct 121536
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 105 bits (53), Expect = 6e-20 Identities = 71/77 (92%) Strand = Plus / Plus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 ||||||| || |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1691 aacctggtgagctgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1750 Query: 189 agtagcggcgagcgaaa 205 |||||||||||||||| Sbjct: 1751 cgtagcggcgagcgaaa 1767
>gb|AE013109.1| Thermoanaerobacter tengcongensis MB4, section 136 of 244 of the complete genome Length = 13623 Score = 105 bits (53), Expect = 6e-20 Identities = 71/77 (92%) Strand = Plus / Minus Query: 129 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 188 |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 2910 aaccgggcgaactgaaacatctcagtagcccgaggaaaagaaagcaaaagcgattccccg 2851 Query: 189 agtagcggcgagcgaaa 205 ||||| ||||||||||| Sbjct: 2850 agtagtggcgagcgaaa 2834 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,956,774 Number of Sequences: 3902068 Number of extensions: 1956774 Number of successful extensions: 159138 Number of sequences better than 10.0: 4449 Number of HSP's better than 10.0 without gapping: 4348 Number of HSP's successfully gapped in prelim test: 121 Number of HSP's that attempted gapping in prelim test: 146924 Number of HSP's gapped (non-prelim): 11742 length of query: 217 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 195 effective length of database: 17,147,199,772 effective search space: 3343703955540 effective search space used: 3343703955540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
