>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
(Trio-associated repeat on actin)
Length = 2365
Score = 33.1 bits (74), Expect = 0.59
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 8/97 (8%)
Frame = -1
Query: 418 NPNTKSIARDNTRPARST----ASLFNP----CRRGRPSPTPPANSVXXXXXXXXXXXRS 263
NP T RDN R +R++ A+ NP +R P + P+ + +
Sbjct: 450 NPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDN 509
Query: 262 IPAMRRSGRRTTPASTNRATCAEESGPRPIGPYASRR 152
A R S R +CA+ PR P + R
Sbjct: 510 PRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRAAR 546
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 8/97 (8%)
Frame = -1
Query: 418 NPNTKSIARDNTRPARST----ASLFNP----CRRGRPSPTPPANSVXXXXXXXXXXXRS 263
NP T RDN R +R++ A+ NP +R P + P + +
Sbjct: 499 NPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRAARDNPTTSCAQRDN 558
Query: 262 IPAMRRSGRRTTPASTNRATCAEESGPRPIGPYASRR 152
A R S R +CA+ PR P + R
Sbjct: 559 PRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRATR 595
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
(ALL1-related protein)
Length = 5262
Score = 29.3 bits (64), Expect = 8.5
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 33 AAPSHPEGGDGGGEAVRPLLSGAPAXXXXXXLDIRYAPY-ARRDAYGPMGRGPLSS 197
A P P G GGG+A PLLS P L+++ A +YGP G + S
Sbjct: 1981 AVPESP--GVGGGKASEPLLSPPPFGESRKALEVKKEELGASSPSYGPPNLGFVDS 2034
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,708,661
Number of Sequences: 219361
Number of extensions: 1469515
Number of successful extensions: 4780
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4760
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)