Clone Name | basd2i20 |
---|---|
Clone Library Name | barley_pub |
>Y1728_MYCBO (P64886) Hypothetical protein Rv1792c/MT1741/Mb1728c| Length = 454 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -3 Query: 392 PCVTLVLDCLLRPLPVSVDDELRHAALRIMLSMSGRFRP 276 P V+ C L LP VD R A + ++ GRFRP Sbjct: 128 PAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRP 166
>Y1702_MYCTU (P64885) Hypothetical protein Rv1792c/MT1741/Mb1728c| Length = 454 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -3 Query: 392 PCVTLVLDCLLRPLPVSVDDELRHAALRIMLSMSGRFRP 276 P V+ C L LP VD R A + ++ GRFRP Sbjct: 128 PAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRP 166
>S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute carrier family 39| member 5) Length = 539 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = -1 Query: 178 KKHEQPPPARAPAGH-SHKTGRKGET 104 +K+ Q PPA AP GH H G +G T Sbjct: 355 EKNSQHPPALAPPGHQGHSHGHQGGT 380
>MRAW_STRPM (Q48RZ0) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 316 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = -2 Query: 207 LPLHPADHKPRSTSNRRR---PAHPQATATRRGEREKL 103 LPL P D KP+ R+ P+H + TA +R KL Sbjct: 271 LPLIPEDMKPKFELVSRKPILPSHSELTANKRAHSAKL 308
>MRAW_STRP8 (P65433) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 316 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = -2 Query: 207 LPLHPADHKPRSTSNRRR---PAHPQATATRRGEREKL 103 LPL P D KP+ R+ P+H + TA +R KL Sbjct: 271 LPLIPEDMKPKFELVSRKPILPSHSELTANKRAHSAKL 308
>MRAW_STRP3 (P65432) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 316 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = -2 Query: 207 LPLHPADHKPRSTSNRRR---PAHPQATATRRGEREKL 103 LPL P D KP+ R+ P+H + TA +R KL Sbjct: 271 LPLIPEDMKPKFELVSRKPILPSHSELTANKRAHSAKL 308
>MRAW_STRP1 (P65431) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 316 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = -2 Query: 207 LPLHPADHKPRSTSNRRR---PAHPQATATRRGEREKL 103 LPL P D KP+ R+ P+H + TA +R KL Sbjct: 271 LPLIPEDMKPKFELVSRKPILPSHSELTANKRAHSAKL 308
>CAC1_YEAST (Q12495) Chromatin assembly factor 1 subunit p90 (CAF-1 90 kDa| subunit) (RAP1 localization factor 2) Length = 606 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -2 Query: 192 ADHKPRSTSNRRRPAHPQATATRRGEREKLAREDEAR 82 A+ K + +RR + A RR E E+L +E+E R Sbjct: 181 AELKKQKEEEKRRKEEARLEAKRRKEEERLKKEEEIR 217
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = -1 Query: 163 PPPARAPAGHSHKTGRKGE 107 PP R P+GH + GR+GE Sbjct: 1308 PPGKRGPSGHMGREGREGE 1326
>VE2_HPV15 (P36784) Regulatory protein E2| Length = 382 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = -2 Query: 180 PRSTSNR--RRPAHPQATATRRGEREKLAREDEARQ 79 PR+ + R R+ + P T TRR +R+ +ED AR+ Sbjct: 163 PRTEARRYNRKESSPTTTTTRRQKRQGQRQEDTARR 198
>IF2_METCA (Q609C0) Translation initiation factor IF-2| Length = 868 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -2 Query: 210 RLPLHPADHKPRSTSNRRRPAHPQATATRRGEREKLAREDEARQ 79 R P P+ KP++ + R PA + A L+R+DE R+ Sbjct: 203 RPPARPSAGKPKAEAPRAHPAERETEARGDKRSAGLSRKDEYRE 246
>CATR1_PARTE (Q27177) Caltractin ICL1A (Centrin)| Length = 181 Score = 27.3 bits (59), Expect = 9.0 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = -1 Query: 181 AKKHEQPPPARAPAGHSHKTGR 116 A++ +QPPP +AP ++TG+ Sbjct: 2 ARRGQQPPPQQAPPAQKNQTGK 23 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,862,564 Number of Sequences: 219361 Number of extensions: 694949 Number of successful extensions: 2503 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2315 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2497 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)