>Y1728_MYCBO (P64886) Hypothetical protein Rv1792c/MT1741/Mb1728c|
          Length = 454

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 392 PCVTLVLDCLLRPLPVSVDDELRHAALRIMLSMSGRFRP 276
           P    V+ C L  LP  VD   R  A   + ++ GRFRP
Sbjct: 128 PAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRP 166

>Y1702_MYCTU (P64885) Hypothetical protein Rv1792c/MT1741/Mb1728c|
          Length = 454

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 392 PCVTLVLDCLLRPLPVSVDDELRHAALRIMLSMSGRFRP 276
           P    V+ C L  LP  VD   R  A   + ++ GRFRP
Sbjct: 128 PAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRP 166

>S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute carrier family 39|
           member 5)
          Length = 539

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -1

Query: 178 KKHEQPPPARAPAGH-SHKTGRKGET 104
           +K+ Q PPA AP GH  H  G +G T
Sbjct: 355 EKNSQHPPALAPPGHQGHSHGHQGGT 380

>MRAW_STRPM (Q48RZ0) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 316

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 207 LPLHPADHKPRSTSNRRR---PAHPQATATRRGEREKL 103
           LPL P D KP+     R+   P+H + TA +R    KL
Sbjct: 271 LPLIPEDMKPKFELVSRKPILPSHSELTANKRAHSAKL 308

>MRAW_STRP8 (P65433) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 316

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 207 LPLHPADHKPRSTSNRRR---PAHPQATATRRGEREKL 103
           LPL P D KP+     R+   P+H + TA +R    KL
Sbjct: 271 LPLIPEDMKPKFELVSRKPILPSHSELTANKRAHSAKL 308

>MRAW_STRP3 (P65432) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 316

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 207 LPLHPADHKPRSTSNRRR---PAHPQATATRRGEREKL 103
           LPL P D KP+     R+   P+H + TA +R    KL
Sbjct: 271 LPLIPEDMKPKFELVSRKPILPSHSELTANKRAHSAKL 308

>MRAW_STRP1 (P65431) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 316

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 207 LPLHPADHKPRSTSNRRR---PAHPQATATRRGEREKL 103
           LPL P D KP+     R+   P+H + TA +R    KL
Sbjct: 271 LPLIPEDMKPKFELVSRKPILPSHSELTANKRAHSAKL 308

>CAC1_YEAST (Q12495) Chromatin assembly factor 1 subunit p90 (CAF-1 90 kDa|
           subunit) (RAP1 localization factor 2)
          Length = 606

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 192 ADHKPRSTSNRRRPAHPQATATRRGEREKLAREDEAR 82
           A+ K +    +RR    +  A RR E E+L +E+E R
Sbjct: 181 AELKKQKEEEKRRKEEARLEAKRRKEEERLKKEEEIR 217

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 163  PPPARAPAGHSHKTGRKGE 107
            PP  R P+GH  + GR+GE
Sbjct: 1308 PPGKRGPSGHMGREGREGE 1326

>VE2_HPV15 (P36784) Regulatory protein E2|
          Length = 382

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 180 PRSTSNR--RRPAHPQATATRRGEREKLAREDEARQ 79
           PR+ + R  R+ + P  T TRR +R+   +ED AR+
Sbjct: 163 PRTEARRYNRKESSPTTTTTRRQKRQGQRQEDTARR 198

>IF2_METCA (Q609C0) Translation initiation factor IF-2|
          Length = 868

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 210 RLPLHPADHKPRSTSNRRRPAHPQATATRRGEREKLAREDEARQ 79
           R P  P+  KP++ + R  PA  +  A        L+R+DE R+
Sbjct: 203 RPPARPSAGKPKAEAPRAHPAERETEARGDKRSAGLSRKDEYRE 246

>CATR1_PARTE (Q27177) Caltractin ICL1A (Centrin)|
          Length = 181

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 181 AKKHEQPPPARAPAGHSHKTGR 116
           A++ +QPPP +AP    ++TG+
Sbjct: 2   ARRGQQPPPQQAPPAQKNQTGK 23


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,862,564
Number of Sequences: 219361
Number of extensions: 694949
Number of successful extensions: 2503
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2497
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)