Clone Name | basd2i13 |
---|---|
Clone Library Name | barley_pub |
>CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger| 1a) (OsCAX1a) Length = 451 Score = 105 bits (261), Expect(2) = 1e-29 Identities = 51/72 (70%), Positives = 54/72 (75%) Frame = +3 Query: 3 ILLGTKXXXXXXXXXXXXXXQCFHFGQVWVFALSLIGLIPLAERVSFLTEQIALYTGPTI 182 + L TK QCF F QVWVFALSL+GLIPLAERVSFLTEQIALYTGPT+ Sbjct: 60 VFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTV 119 Query: 183 GGLLNATCGNAT 218 GGLLNATCGNAT Sbjct: 120 GGLLNATCGNAT 131 Score = 42.7 bits (99), Expect(2) = 1e-29 Identities = 20/23 (86%), Positives = 23/23 (100%) Frame = +1 Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288 ELIIA+FAL++GKIEVVKCSLLG Sbjct: 132 ELIIALFALLKGKIEVVKCSLLG 154
>CAX1B_ORYSA (Q5TKG3) Vacuolar cation/proton exchanger 1b (Ca(2+)/H(+) exchanger| 1b) (OsCAX1b) Length = 453 Score = 92.0 bits (227), Expect(2) = 2e-24 Identities = 45/72 (62%), Positives = 50/72 (69%) Frame = +3 Query: 3 ILLGTKXXXXXXXXXXXXXXQCFHFGQVWVFALSLIGLIPLAERVSFLTEQIALYTGPTI 182 +LL T+ HFGQVWVF LSLIGL+PLAER+SFLTEQIA YTGPT+ Sbjct: 68 VLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTV 127 Query: 183 GGLLNATCGNAT 218 GGLLNAT GN T Sbjct: 128 GGLLNATFGNVT 139 Score = 38.1 bits (87), Expect(2) = 2e-24 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = +1 Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288 E+IIA+ AL +GKIEVVKCSLLG Sbjct: 140 EVIIALLALREGKIEVVKCSLLG 162
>CAX1C_ORYSA (Q5KTQ9) Vacuolar cation/proton exchanger 1c (Ca(2+)/H(+) exchanger| 1c) (OsCAX1c) Length = 450 Score = 79.7 bits (195), Expect(2) = 6e-19 Identities = 39/70 (55%), Positives = 45/70 (64%) Frame = +3 Query: 3 ILLGTKXXXXXXXXXXXXXXQCFHFGQVWVFALSLIGLIPLAERVSFLTEQIALYTGPTI 182 +LLGTK + G+VWVFA SLIGL PLAERVSFL+E IA GPT Sbjct: 75 VLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTA 134 Query: 183 GGLLNATCGN 212 GG++NATCGN Sbjct: 135 GGIMNATCGN 144 Score = 32.0 bits (71), Expect(2) = 6e-19 Identities = 15/23 (65%), Positives = 20/23 (86%) Frame = +1 Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288 ELIIA+FAL + K+E++K SLLG Sbjct: 147 ELIIALFALHKNKMEILKWSLLG 169
>CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger| 3) (OsCAX3) Length = 417 Score = 67.0 bits (162), Expect(2) = 4e-14 Identities = 29/43 (67%), Positives = 37/43 (86%) Frame = +3 Query: 90 VFALSLIGLIPLAERVSFLTEQIALYTGPTIGGLLNATCGNAT 218 VF S++G+ PLAER+ + TEQ+A+YTGPT+GGLLNAT GNAT Sbjct: 76 VFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNAT 118 Score = 28.5 bits (62), Expect(2) = 4e-14 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +1 Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288 E+IIA++AL G I VV+ SLLG Sbjct: 119 EMIIAIYALKNGMIRVVQQSLLG 141
>CAX2_ORYSA (Q5KQN0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger| 2) (OsCAX2) Length = 437 Score = 74.7 bits (182), Expect = 6e-14 Identities = 35/46 (76%), Positives = 39/46 (84%) Frame = +3 Query: 81 QVWVFALSLIGLIPLAERVSFLTEQIALYTGPTIGGLLNATCGNAT 218 Q WVF SLIG+ PLAER+ + TEQ+ALYTGPTIGGLLNAT GNAT Sbjct: 94 QGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNAT 139
>CAX4_ORYSA (Q6YXZ1) Putative vacuolar cation/proton exchanger 4 (Ca(2+)/H(+)| exchanger 4) (OsCAX4) Length = 447 Score = 44.7 bits (104), Expect(2) = 5e-07 Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%) Frame = +3 Query: 87 WVFALSLIGLIPLAERVSFLTE-QIALYTGPTIGGLLNATCGNAT 218 WVF LS++G+IPLAER+ F T+ QI+ +G LLN+ GNAT Sbjct: 95 WVFPLSMLGIIPLAERLGFATDWQISC----EVGRLLNSAFGNAT 135 Score = 26.6 bits (57), Expect(2) = 5e-07 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = +1 Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288 ELII++ AL +GK+ VV+ LLG Sbjct: 136 ELIISIHALSRGKLHVVQQCLLG 158
>VCX1_YEAST (Q99385) Vacuolar calcium ion transporter (Vacuolar Ca(2+)/H(+)| exchanger) (High copy number undoes manganese protein 1) (Manganese resistance 1 protein) Length = 411 Score = 43.5 bits (101), Expect(2) = 6e-07 Identities = 22/49 (44%), Positives = 29/49 (59%) Frame = +3 Query: 69 FHFGQVWVFALSLIGLIPLAERVSFLTEQIALYTGPTIGGLLNATCGNA 215 F F + + +IPLA ++ TE++A G TIGGLLNAT GNA Sbjct: 56 FQLSHTLTFLFNFLAIIPLAAILANATEELADKAGNTIGGLLNATFGNA 104 Score = 27.3 bits (59), Expect(2) = 6e-07 Identities = 10/23 (43%), Positives = 19/23 (82%) Frame = +1 Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288 ELI+++ AL +G++ +V+ S+LG Sbjct: 106 ELIVSIIALKKGQVRIVQASMLG 128
>PRSS8_HUMAN (Q16651) Prostasin precursor (EC 3.4.21.-) [Contains: Prostasin| light chain; Prostasin heavy chain] Length = 343 Score = 29.3 bits (64), Expect = 2.7 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = -3 Query: 211 LPHVAFRRPPIVGPV*RAICSVRKLTRSARGMRPIRLSANTHTWPKWKHCATTASGTATK 32 +PH ++ + G + A+ + + +R +RPI L A ++P HC T G Sbjct: 121 IPHPSYLQEGSQGDI--ALLQLSRPITFSRYIRPICLPAANASFPNGLHCTVTGWGHVAP 178 Query: 31 RTASLVPR 8 + L P+ Sbjct: 179 SVSLLTPK 186
>YTZ4_AGRVI (P70796) Hypothetical 31.6 kDa protein in TAR-I ttuC' 3'region| (ORFZ4) Length = 280 Score = 28.5 bits (62), Expect = 4.6 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +2 Query: 140 LPDRADCPLHWPHNWRSPERDVRQRHG 220 LPDRA+ H H R R VRQR+G Sbjct: 105 LPDRAEKQAHDDHPERLQNRSVRQRNG 131
>MURC_SYNP7 (P95836) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 478 Score = 28.1 bits (61), Expect = 6.0 Identities = 17/44 (38%), Positives = 22/44 (50%) Frame = +3 Query: 135 VSFLTEQIALYTGPTIGGLLNATCGNATGADHRHVRAGAREDRG 266 +++L Q L IGG +NA GNA RH+ A A E G Sbjct: 136 IAYLLYQAGLDPTVVIGGEVNALGGNARLGQGRHLVAEADESDG 179
>POLG_DEN2J (P07564) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3391 Score = 28.1 bits (61), Expect = 6.0 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -3 Query: 94 NTHTWPKWKHCATTASGTATKRTASLVP 11 +T TW + CATT KR+ +LVP Sbjct: 184 STSTWVTYGTCATTGEHRREKRSVALVP 211
>RCBT2_RAT (Q6P798) RCC1 and BTB domain-containing protein 2 (Regulator of| chromosome condensation and BTB domain-containing protein 2) (Chromosome condensation 1-like) Length = 551 Score = 28.1 bits (61), Expect = 6.0 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 201 SRSGDRQLWGQCRGQSAL 148 S+ G +WGQCRGQS + Sbjct: 326 SQGGHVYMWGQCRGQSVI 343 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,270,774 Number of Sequences: 219361 Number of extensions: 602787 Number of successful extensions: 1964 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1931 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1963 length of database: 80,573,946 effective HSP length: 71 effective length of database: 64,999,315 effective search space used: 1559983560 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)