ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2i13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)... 105 1e-29
2CAX1B_ORYSA (Q5TKG3) Vacuolar cation/proton exchanger 1b (Ca(2+)... 92 2e-24
3CAX1C_ORYSA (Q5KTQ9) Vacuolar cation/proton exchanger 1c (Ca(2+)... 80 6e-19
4CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H... 67 4e-14
5CAX2_ORYSA (Q5KQN0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H... 75 6e-14
6CAX4_ORYSA (Q6YXZ1) Putative vacuolar cation/proton exchanger 4 ... 45 5e-07
7VCX1_YEAST (Q99385) Vacuolar calcium ion transporter (Vacuolar C... 44 6e-07
8PRSS8_HUMAN (Q16651) Prostasin precursor (EC 3.4.21.-) [Contains... 29 2.7
9YTZ4_AGRVI (P70796) Hypothetical 31.6 kDa protein in TAR-I ttuC'... 28 4.6
10MURC_SYNP7 (P95836) UDP-N-acetylmuramate--L-alanine ligase (EC 6... 28 6.0
11POLG_DEN2J (P07564) Genome polyprotein [Contains: Capsid protein... 28 6.0
12RCBT2_RAT (Q6P798) RCC1 and BTB domain-containing protein 2 (Reg... 28 6.0

>CAX1A_ORYSA (Q769E5) Vacuolar cation/proton exchanger 1a (Ca(2+)/H(+) exchanger|
           1a) (OsCAX1a)
          Length = 451

 Score =  105 bits (261), Expect(2) = 1e-29
 Identities = 51/72 (70%), Positives = 54/72 (75%)
 Frame = +3

Query: 3   ILLGTKXXXXXXXXXXXXXXQCFHFGQVWVFALSLIGLIPLAERVSFLTEQIALYTGPTI 182
           + L TK              QCF F QVWVFALSL+GLIPLAERVSFLTEQIALYTGPT+
Sbjct: 60  VFLATKLAVLFPAVPLAIAAQCFRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTV 119

Query: 183 GGLLNATCGNAT 218
           GGLLNATCGNAT
Sbjct: 120 GGLLNATCGNAT 131



 Score = 42.7 bits (99), Expect(2) = 1e-29
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +1

Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288
           ELIIA+FAL++GKIEVVKCSLLG
Sbjct: 132 ELIIALFALLKGKIEVVKCSLLG 154



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>CAX1B_ORYSA (Q5TKG3) Vacuolar cation/proton exchanger 1b (Ca(2+)/H(+) exchanger|
           1b) (OsCAX1b)
          Length = 453

 Score = 92.0 bits (227), Expect(2) = 2e-24
 Identities = 45/72 (62%), Positives = 50/72 (69%)
 Frame = +3

Query: 3   ILLGTKXXXXXXXXXXXXXXQCFHFGQVWVFALSLIGLIPLAERVSFLTEQIALYTGPTI 182
           +LL T+                 HFGQVWVF LSLIGL+PLAER+SFLTEQIA YTGPT+
Sbjct: 68  VLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTV 127

Query: 183 GGLLNATCGNAT 218
           GGLLNAT GN T
Sbjct: 128 GGLLNATFGNVT 139



 Score = 38.1 bits (87), Expect(2) = 2e-24
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +1

Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288
           E+IIA+ AL +GKIEVVKCSLLG
Sbjct: 140 EVIIALLALREGKIEVVKCSLLG 162



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>CAX1C_ORYSA (Q5KTQ9) Vacuolar cation/proton exchanger 1c (Ca(2+)/H(+) exchanger|
           1c) (OsCAX1c)
          Length = 450

 Score = 79.7 bits (195), Expect(2) = 6e-19
 Identities = 39/70 (55%), Positives = 45/70 (64%)
 Frame = +3

Query: 3   ILLGTKXXXXXXXXXXXXXXQCFHFGQVWVFALSLIGLIPLAERVSFLTEQIALYTGPTI 182
           +LLGTK              +    G+VWVFA SLIGL PLAERVSFL+E IA   GPT 
Sbjct: 75  VLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTA 134

Query: 183 GGLLNATCGN 212
           GG++NATCGN
Sbjct: 135 GGIMNATCGN 144



 Score = 32.0 bits (71), Expect(2) = 6e-19
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = +1

Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288
           ELIIA+FAL + K+E++K SLLG
Sbjct: 147 ELIIALFALHKNKMEILKWSLLG 169



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>CAX3_ORYSA (Q6K1C4) Vacuolar cation/proton exchanger 3 (Ca(2+)/H(+) exchanger|
           3) (OsCAX3)
          Length = 417

 Score = 67.0 bits (162), Expect(2) = 4e-14
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +3

Query: 90  VFALSLIGLIPLAERVSFLTEQIALYTGPTIGGLLNATCGNAT 218
           VF  S++G+ PLAER+ + TEQ+A+YTGPT+GGLLNAT GNAT
Sbjct: 76  VFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNAT 118



 Score = 28.5 bits (62), Expect(2) = 4e-14
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +1

Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288
           E+IIA++AL  G I VV+ SLLG
Sbjct: 119 EMIIAIYALKNGMIRVVQQSLLG 141



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>CAX2_ORYSA (Q5KQN0) Vacuolar cation/proton exchanger 2 (Ca(2+)/H(+) exchanger|
           2) (OsCAX2)
          Length = 437

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = +3

Query: 81  QVWVFALSLIGLIPLAERVSFLTEQIALYTGPTIGGLLNATCGNAT 218
           Q WVF  SLIG+ PLAER+ + TEQ+ALYTGPTIGGLLNAT GNAT
Sbjct: 94  QGWVFLFSLIGITPLAERLGYATEQLALYTGPTIGGLLNATFGNAT 139



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>CAX4_ORYSA (Q6YXZ1) Putative vacuolar cation/proton exchanger 4 (Ca(2+)/H(+)|
           exchanger 4) (OsCAX4)
          Length = 447

 Score = 44.7 bits (104), Expect(2) = 5e-07
 Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
 Frame = +3

Query: 87  WVFALSLIGLIPLAERVSFLTE-QIALYTGPTIGGLLNATCGNAT 218
           WVF LS++G+IPLAER+ F T+ QI+      +G LLN+  GNAT
Sbjct: 95  WVFPLSMLGIIPLAERLGFATDWQISC----EVGRLLNSAFGNAT 135



 Score = 26.6 bits (57), Expect(2) = 5e-07
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288
           ELII++ AL +GK+ VV+  LLG
Sbjct: 136 ELIISIHALSRGKLHVVQQCLLG 158



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>VCX1_YEAST (Q99385) Vacuolar calcium ion transporter (Vacuolar Ca(2+)/H(+)|
           exchanger) (High copy number undoes manganese protein 1)
           (Manganese resistance 1 protein)
          Length = 411

 Score = 43.5 bits (101), Expect(2) = 6e-07
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = +3

Query: 69  FHFGQVWVFALSLIGLIPLAERVSFLTEQIALYTGPTIGGLLNATCGNA 215
           F       F  + + +IPLA  ++  TE++A   G TIGGLLNAT GNA
Sbjct: 56  FQLSHTLTFLFNFLAIIPLAAILANATEELADKAGNTIGGLLNATFGNA 104



 Score = 27.3 bits (59), Expect(2) = 6e-07
 Identities = 10/23 (43%), Positives = 19/23 (82%)
 Frame = +1

Query: 220 ELIIAMFALVQGKIEVVKCSLLG 288
           ELI+++ AL +G++ +V+ S+LG
Sbjct: 106 ELIVSIIALKKGQVRIVQASMLG 128



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>PRSS8_HUMAN (Q16651) Prostasin precursor (EC 3.4.21.-) [Contains: Prostasin|
           light chain; Prostasin heavy chain]
          Length = 343

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/68 (25%), Positives = 31/68 (45%)
 Frame = -3

Query: 211 LPHVAFRRPPIVGPV*RAICSVRKLTRSARGMRPIRLSANTHTWPKWKHCATTASGTATK 32
           +PH ++ +    G +  A+  + +    +R +RPI L A   ++P   HC  T  G    
Sbjct: 121 IPHPSYLQEGSQGDI--ALLQLSRPITFSRYIRPICLPAANASFPNGLHCTVTGWGHVAP 178

Query: 31  RTASLVPR 8
             + L P+
Sbjct: 179 SVSLLTPK 186



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>YTZ4_AGRVI (P70796) Hypothetical 31.6 kDa protein in TAR-I ttuC' 3'region|
           (ORFZ4)
          Length = 280

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 140 LPDRADCPLHWPHNWRSPERDVRQRHG 220
           LPDRA+   H  H  R   R VRQR+G
Sbjct: 105 LPDRAEKQAHDDHPERLQNRSVRQRNG 131



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>MURC_SYNP7 (P95836) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)|
           (UDP-N-acetylmuramoyl-L-alanine synthetase)
          Length = 478

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +3

Query: 135 VSFLTEQIALYTGPTIGGLLNATCGNATGADHRHVRAGAREDRG 266
           +++L  Q  L     IGG +NA  GNA     RH+ A A E  G
Sbjct: 136 IAYLLYQAGLDPTVVIGGEVNALGGNARLGQGRHLVAEADESDG 179



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>POLG_DEN2J (P07564) Genome polyprotein [Contains: Capsid protein C (Core|
           protein); Envelope protein M (Matrix protein); Major
           envelope protein E; Nonstructural protein 1 (NS1);
           Nonstructural protein 2A (NS2A); Flavivirin protease
           NS2B regulatory subunit;
          Length = 3391

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 94  NTHTWPKWKHCATTASGTATKRTASLVP 11
           +T TW  +  CATT      KR+ +LVP
Sbjct: 184 STSTWVTYGTCATTGEHRREKRSVALVP 211



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>RCBT2_RAT (Q6P798) RCC1 and BTB domain-containing protein 2 (Regulator of|
           chromosome condensation and BTB domain-containing
           protein 2) (Chromosome condensation 1-like)
          Length = 551

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 201 SRSGDRQLWGQCRGQSAL 148
           S+ G   +WGQCRGQS +
Sbjct: 326 SQGGHVYMWGQCRGQSVI 343


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,270,774
Number of Sequences: 219361
Number of extensions: 602787
Number of successful extensions: 1964
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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