Clone Name | basd2i11 |
---|---|
Clone Library Name | barley_pub |
>emb|CR388175.9| Zebrafish DNA sequence from clone DKEY-63B1 in linkage group 20, complete sequence Length = 207204 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 70 atctggtttttgttattttcttt 92 ||||||||||||||||||||||| Sbjct: 22915 atctggtttttgttattttcttt 22937
>gb|AC148485.10| Medicago truncatula clone mth2-46j5, complete sequence Length = 111045 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 ttattttctttgaaaaaattgtattgattt 111 ||||||||||| ||||||||| |||||||| Sbjct: 4751 ttattttctttaaaaaaattgaattgattt 4722
>emb|AL607127.12| Mouse DNA sequence from clone RP23-196B19 on chromosome 11, complete sequence Length = 79389 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 73 tggtttttgttattttctttgaaaaa 98 ||||||||||| |||||||||||||| Sbjct: 56175 tggtttttgtttttttctttgaaaaa 56150
>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete sequence Length = 250713 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 tcatcatcatcttctaaagaa 347 ||||||||||||||||||||| Sbjct: 160658 tcatcatcatcttctaaagaa 160638
>gb|AC104856.19| Mus musculus chromosome 5, clone RP23-53G23, complete sequence Length = 169800 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 gtttttgttattttctttgaa 95 ||||||||||||||||||||| Sbjct: 134685 gtttttgttattttctttgaa 134705 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gtttttgttattttctttgaa 95 ||||||||||||||||||||| Sbjct: 61888 gtttttgttattttctttgaa 61868
>ref|NM_177256.2| Mus musculus peroxiredoxin 6, related sequence 1 (Prdx6-rs1), mRNA Length = 2884 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 ttttctttgaaaaaattgtat 105 ||||||||||||||||||||| Sbjct: 1302 ttttctttgaaaaaattgtat 1322
>ref|XM_970797.1| PREDICTED: Tribolium castaneum similar to CG3644-PA, isoform A, transcript variant 4 (LOC656401), mRNA Length = 747 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gcagacacatctccaccaaat 202 ||||||||||||||||||||| Sbjct: 634 gcagacacatctccaccaaat 614
>ref|XM_970760.1| PREDICTED: Tribolium castaneum similar to CG3644-PA, isoform A, transcript variant 3 (LOC656401), mRNA Length = 822 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gcagacacatctccaccaaat 202 ||||||||||||||||||||| Sbjct: 636 gcagacacatctccaccaaat 616
>ref|XM_970705.1| PREDICTED: Tribolium castaneum similar to CG3644-PA, isoform A, transcript variant 2 (LOC656401), mRNA Length = 921 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gcagacacatctccaccaaat 202 ||||||||||||||||||||| Sbjct: 738 gcagacacatctccaccaaat 718
>ref|XM_961249.1| PREDICTED: Tribolium castaneum similar to CG3644-PA, isoform A, transcript variant 1 (LOC656401), mRNA Length = 774 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gcagacacatctccaccaaat 202 ||||||||||||||||||||| Sbjct: 688 gcagacacatctccaccaaat 668
>gb|AC147010.31| Medicago truncatula clone mth2-145p5, complete sequence Length = 132320 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 gtttttgttattttctttgaaaaaa 99 ||||||| ||||||||||||||||| Sbjct: 96413 gtttttggtattttctttgaaaaaa 96389
>gb|AC016933.20| Homo sapiens 3 BAC RP11-166D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153763 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 ttattttctttgaaaaaattgtatt 106 ||||||||||||||| ||||||||| Sbjct: 124787 ttattttctttgaaacaattgtatt 124811
>gb|AC159307.2| Mus musculus BAC clone RP23-169J21 from chromosome 12, complete sequence Length = 190562 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 tgggcagttcaaactcagaag 56 ||||||||||||||||||||| Sbjct: 71739 tgggcagttcaaactcagaag 71759
>gb|AC008446.5| Homo sapiens chromosome 5 clone CTC-340A15, complete sequence Length = 152232 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 ttattttctttgaaaaaattg 102 ||||||||||||||||||||| Sbjct: 76855 ttattttctttgaaaaaattg 76835
>dbj|AK077012.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932409D11 product:peroxiredoxin 5, related sequence 1, full insert sequence Length = 2884 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 ttttctttgaaaaaattgtat 105 ||||||||||||||||||||| Sbjct: 1302 ttttctttgaaaaaattgtat 1322
>emb|AL928587.7| Mouse DNA sequence from clone RP23-282M14 on chromosome 2, complete sequence Length = 218618 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 85 ttttctttgaaaaaattgtat 105 ||||||||||||||||||||| Sbjct: 108329 ttttctttgaaaaaattgtat 108349
>ref|NM_115615.2| Arabidopsis thaliana AGK2 AT3G57550 (AGK2) transcript variant AT3G57550.1 mRNA, complete cds Length = 1774 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 caatgttcatcatcatcttctaaa 344 ||||||||||||||||| |||||| Sbjct: 1569 caatgttcatcatcatcgtctaaa 1546
>ref|NM_001035800.1| Arabidopsis thaliana AGK2 AT3G57550 (AGK2) transcript variant AT3G57550.2 mRNA, complete cds Length = 1777 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 caatgttcatcatcatcttctaaa 344 ||||||||||||||||| |||||| Sbjct: 1572 caatgttcatcatcatcgtctaaa 1549
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctctcatgggcagacacatc 192 |||||||||||||||||||| Sbjct: 2597183 ctctcatgggcagacacatc 2597164
>gb|AC013351.7| Drosophila melanogaster clone BACR06H06, complete sequence Length = 186935 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ttttgttattttctttgaaa 96 |||||||||||||||||||| Sbjct: 94822 ttttgttattttctttgaaa 94803
>gb|AC018484.5| Drosophila melanogaster clone BACR13A13, complete sequence Length = 172746 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ttttgttattttctttgaaa 96 |||||||||||||||||||| Sbjct: 20968 ttttgttattttctttgaaa 20949
>gb|BC034200.1| Mus musculus pre-B-cell leukemia transcription factor interacting protein 1, mRNA (cDNA clone MGC:37533 IMAGE:4986595), complete cds Length = 2438 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 86 gtgctcgctggttctgagaa 105
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tgttattttctttgaaaaaa 99 |||||||||||||||||||| Sbjct: 53187 tgttattttctttgaaaaaa 53168
>ref|NM_146131.1| Mus musculus pre-B-cell leukemia transcription factor interacting protein 1 (Pbxip1), mRNA Length = 2463 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 115 gtgctcgctggttctgagaa 134
>gb|AY314864.1| Paragoniocotes sp. VSS-2003 12S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 370 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 tttttgttattttctttgaaaaaa 99 ||||||| |||||||||||||||| Sbjct: 272 tttttgtaattttctttgaaaaaa 295
>gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4, complete sequence Length = 331039 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 aaaaattgtattgatttgtcattt 118 ||||||||||||||||||| |||| Sbjct: 283675 aaaaattgtattgatttgtaattt 283652
>ref|XM_982215.1| PREDICTED: Mus musculus pre-B-cell leukemia transcription factor interacting protein 1 (Pbxip1), mRNA Length = 3703 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 34 gtgctcgctggttctgagaa 53
>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23, complete sequence Length = 190837 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tggtttttgttattttcttt 92 |||||||||||||||||||| Sbjct: 158157 tggtttttgttattttcttt 158138
>emb|AL161931.13| Human DNA sequence from clone RP11-1021O19 on chromosome 10 Contains the 3' end of the ZNF33A gene for zinc finger protein 33a (KOX 31), complete sequence Length = 19853 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ggacggggtgcataaagagaagga 457 |||| ||||||||||||||||||| Sbjct: 15231 ggactgggtgcataaagagaagga 15254
>emb|AL136360.21| Human DNA sequence from clone RP11-317B7 on chromosome 4, complete sequence Length = 103727 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aatctggtttttgttatttt 88 |||||||||||||||||||| Sbjct: 73444 aatctggtttttgttatttt 73425
>gb|AC164008.2| Mus musculus chromosome 1, clone RP23-311L17, complete sequence Length = 171582 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aaaaaattgtattgatttgt 113 |||||||||||||||||||| Sbjct: 162433 aaaaaattgtattgatttgt 162414
>gb|AC105162.11| Mus musculus chromosome 1, clone RP24-92O11, complete sequence Length = 177420 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ttcaaactcagaagatttaagttg 66 ||||||||||||||||| |||||| Sbjct: 109630 ttcaaactcagaagattaaagttg 109653
>gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome 16, complete sequence Length = 237479 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 aatctggtttttgttattttcttt 92 ||||||||||||||| |||||||| Sbjct: 129792 aatctggtttttgtttttttcttt 129769
>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10 Length = 87503 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 caatgttcatcatcatcttctaaa 344 ||||||||||||||||| |||||| Sbjct: 63095 caatgttcatcatcatcgtctaaa 63072
>emb|CR848041.4| Zebrafish DNA sequence from clone DKEY-4K21 in linkage group 21, complete sequence Length = 177962 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tttgttattttctttgaaaa 97 |||||||||||||||||||| Sbjct: 127621 tttgttattttctttgaaaa 127602
>gb|BC026838.1| Mus musculus pre-B-cell leukemia transcription factor interacting protein 1, mRNA (cDNA clone MGC:27544 IMAGE:4460993), complete cds Length = 2449 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 80 gtgctcgctggttctgagaa 99
>emb|BX511228.8| Zebrafish DNA sequence from clone DKEY-174F1 in linkage group 21, complete sequence Length = 64586 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tttgttattttctttgaaaa 97 |||||||||||||||||||| Sbjct: 14932 tttgttattttctttgaaaa 14913
>gb|AC113344.2| Homo sapiens chromosome 5 clone CTD-2382P15, complete sequence Length = 128990 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 tttctttgaaaaaattgtat 105 |||||||||||||||||||| Sbjct: 32375 tttctttgaaaaaattgtat 32356
>dbj|AK159448.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420020F02 product:pre-B-cell leukemia transcription factor interacting protein 1, full insert sequence Length = 2461 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 132 gtgctcgctggttctgagaa 151
>dbj|AK159422.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420019M04 product:pre-B-cell leukemia transcription factor interacting protein 1, full insert sequence Length = 2461 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 132 gtgctcgctggttctgagaa 151
>dbj|AK160103.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420049E19 product:pre-B-cell leukemia transcription factor interacting protein 1, full insert sequence Length = 2456 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 126 gtgctcgctggttctgagaa 145
>dbj|AK159633.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420026I05 product:pre-B-cell leukemia transcription factor interacting protein 1, full insert sequence Length = 2452 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 122 gtgctcgctggttctgagaa 141
>dbj|AK170318.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630046N07 product:pre-B-cell leukemia transcription factor interacting protein 1, full insert sequence Length = 2431 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 101 gtgctcgctggttctgagaa 120
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 tattttctttgaaaaaattg 102 |||||||||||||||||||| Sbjct: 935281 tattttctttgaaaaaattg 935300
>dbj|AK028858.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732463H20 product:similar to HEMATOPOIETIC PBX-INTERACTING PROTEIN [Homo sapiens], full insert sequence Length = 2472 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 143 gtgctcgctggttctgagaa 162
>dbj|AK028754.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732452L17 product:similar to HEMATOPOIETIC PBX-INTERACTING PROTEIN [Homo sapiens], full insert sequence Length = 2437 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 106 gtgctcgctggttctgagaa 125
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tgttattttctttgaaaaaa 99 |||||||||||||||||||| Sbjct: 26408496 tgttattttctttgaaaaaa 26408477
>gb|DQ060036.1| Homo sapiens polymerase (DNA directed) nu (POLN) gene, complete cds Length = 161222 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aatctggtttttgttatttt 88 |||||||||||||||||||| Sbjct: 130984 aatctggtttttgttatttt 130965
>emb|BX823964.1|CNS0A5OU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZF10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1750 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 caatgttcatcatcatcttctaaa 344 ||||||||||||||||| |||||| Sbjct: 1567 caatgttcatcatcatcgtctaaa 1544
>gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, complete sequence Length = 197439 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 aaaaaattgtattgatttgt 113 |||||||||||||||||||| Sbjct: 142521 aaaaaattgtattgatttgt 142540
>gb|BT002466.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1679 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 caatgttcatcatcatcttctaaa 344 ||||||||||||||||| |||||| Sbjct: 1480 caatgttcatcatcatcgtctaaa 1457
>gb|AF204676.1|AF204676 Arabidopsis thaliana cultivar Columbia guanylate kinase (GK-2) mRNA, complete cds Length = 1852 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 caatgttcatcatcatcttctaaa 344 ||||||||||||||||| |||||| Sbjct: 1569 caatgttcatcatcatcgtctaaa 1546
>emb|BX005372.6| Zebrafish DNA sequence from clone DKEY-76K16, complete sequence Length = 199736 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aaaaaattgtattgatttgt 113 |||||||||||||||||||| Sbjct: 46133 aaaaaattgtattgatttgt 46114
>gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, partial sequence, complete sequence Length = 312283 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 ggacggggtgcataaagagaagga 457 |||| ||||||||||||||||||| Sbjct: 256073 ggactgggtgcataaagagaagga 256096
>gb|BC027771.1| Mus musculus pre-B-cell leukemia transcription factor interacting protein 1, mRNA (cDNA clone MGC:38361 IMAGE:5344900), complete cds Length = 2463 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gtgctcgctggttctgagaa 231 |||||||||||||||||||| Sbjct: 115 gtgctcgctggttctgagaa 134
>gb|AE003782.4| Drosophila melanogaster chromosome 2L, section 81 of 83 of the complete sequence Length = 298116 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ttttgttattttctttgaaa 96 |||||||||||||||||||| Sbjct: 239676 ttttgttattttctttgaaa 239657
>dbj|AP002379.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-463F4, complete sequence Length = 215986 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ttattttctttgaaaaaatt 101 |||||||||||||||||||| Sbjct: 124147 ttattttctttgaaaaaatt 124128
>gb|AY613855.1| Oikopleura dioica clone BACOIKO007 10xi11, complete sequence Length = 104968 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 tttttgttattttctttgaa 95 |||||||||||||||||||| Sbjct: 92842 tttttgttattttctttgaa 92823
>dbj|AP003730.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-379J13, complete sequences Length = 226171 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ttattttctttgaaaaaatt 101 |||||||||||||||||||| Sbjct: 207262 ttattttctttgaaaaaatt 207243
>gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, complete sequence Length = 195993 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 atttgtcatttgcctagagt 127 |||||||||||||||||||| Sbjct: 133073 atttgtcatttgcctagagt 133092
>gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, complete sequence Length = 173965 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 tgtttccatgtcgacaatgttcat 330 |||||||||||| ||||||||||| Sbjct: 115236 tgtttccatgtcaacaatgttcat 115213
>gb|AC145960.3| Gallus gallus BAC clone CH261-18H1 from chromosome unknown, complete sequence Length = 204548 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ttattttctttgaaaaaatt 101 |||||||||||||||||||| Sbjct: 166305 ttattttctttgaaaaaatt 166286
>gb|AC147598.2| Gallus gallus BAC clone CH261-121K14 from chromosome unknown, complete sequence Length = 197142 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 ttattttctttgaaaaaatt 101 |||||||||||||||||||| Sbjct: 182315 ttattttctttgaaaaaatt 182334
>emb|Z49862.1|HSL58B6 Human DNA sequence from clone LA04NC01-58B6 on chromosome 4, complete sequence Length = 28142 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aatctggtttttgttatttt 88 |||||||||||||||||||| Sbjct: 15616 aatctggtttttgttatttt 15597
>emb|Z81098.1|CEK07A12 Caenorhabditis elegans Cosmid K07A12, complete sequence Length = 29106 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ttgttattttctttgaaaaa 98 |||||||||||||||||||| Sbjct: 6437 ttgttattttctttgaaaaa 6418
>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 tggtttttgttattttcttt 92 |||||||||||||||||||| Sbjct: 80270 tggtttttgttattttcttt 80251
>dbj|AP006647.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT29F18, TM0312, complete sequence Length = 119276 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 aatgttcatcatcatcttct 341 |||||||||||||||||||| Sbjct: 30241 aatgttcatcatcatcttct 30260 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,395,680 Number of Sequences: 3902068 Number of extensions: 6395680 Number of successful extensions: 149419 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 149215 Number of HSP's gapped (non-prelim): 204 length of query: 610 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 587 effective length of database: 17,143,297,704 effective search space: 10063115752248 effective search space used: 10063115752248 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)