ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2i11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR388175.9| Zebrafish DNA sequence from clone DKEY-63B1 in l... 46 0.13
2gb|AC148485.10| Medicago truncatula clone mth2-46j5, complete se... 44 0.53
3emb|AL607127.12| Mouse DNA sequence from clone RP23-196B19 on ch... 44 0.53
4gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section ... 42 2.1
5gb|AC104856.19| Mus musculus chromosome 5, clone RP23-53G23, com... 42 2.1
6ref|NM_177256.2| Mus musculus peroxiredoxin 6, related sequence ... 42 2.1
7ref|XM_970797.1| PREDICTED: Tribolium castaneum similar to CG364... 42 2.1
8ref|XM_970760.1| PREDICTED: Tribolium castaneum similar to CG364... 42 2.1
9ref|XM_970705.1| PREDICTED: Tribolium castaneum similar to CG364... 42 2.1
10ref|XM_961249.1| PREDICTED: Tribolium castaneum similar to CG364... 42 2.1
11gb|AC147010.31| Medicago truncatula clone mth2-145p5, complete s... 42 2.1
12gb|AC016933.20| Homo sapiens 3 BAC RP11-166D18 (Roswell Park Can... 42 2.1
13gb|AC159307.2| Mus musculus BAC clone RP23-169J21 from chromosom... 42 2.1
14gb|AC008446.5| Homo sapiens chromosome 5 clone CTC-340A15, compl... 42 2.1
15dbj|AK077012.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 2.1
16emb|AL928587.7| Mouse DNA sequence from clone RP23-282M14 on chr... 42 2.1
17ref|NM_115615.2| Arabidopsis thaliana AGK2 AT3G57550 (AGK2) tran... 40 8.3
18ref|NM_001035800.1| Arabidopsis thaliana AGK2 AT3G57550 (AGK2) t... 40 8.3
19gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 8.3
20gb|AC013351.7| Drosophila melanogaster clone BACR06H06, complete... 40 8.3
21gb|AC018484.5| Drosophila melanogaster clone BACR13A13, complete... 40 8.3
22gb|BC034200.1| Mus musculus pre-B-cell leukemia transcription fa... 40 8.3
23gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
24ref|NM_146131.1| Mus musculus pre-B-cell leukemia transcription ... 40 8.3
25gb|AY314864.1| Paragoniocotes sp. VSS-2003 12S ribosomal RNA gen... 40 8.3
26gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720... 40 8.3
27ref|XM_982215.1| PREDICTED: Mus musculus pre-B-cell leukemia tra... 40 8.3
28emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on ch... 40 8.3
29emb|AL161931.13| Human DNA sequence from clone RP11-1021O19 on c... 40 8.3
30emb|AL136360.21| Human DNA sequence from clone RP11-317B7 on chr... 40 8.3
31gb|AC164008.2| Mus musculus chromosome 1, clone RP23-311L17, com... 40 8.3
32gb|AC105162.11| Mus musculus chromosome 1, clone RP24-92O11, com... 40 8.3
33gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome... 40 8.3
34emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BA... 40 8.3
35emb|CR848041.4| Zebrafish DNA sequence from clone DKEY-4K21 in l... 40 8.3
36gb|BC026838.1| Mus musculus pre-B-cell leukemia transcription fa... 40 8.3
37emb|BX511228.8| Zebrafish DNA sequence from clone DKEY-174F1 in ... 40 8.3
38gb|AC113344.2| Homo sapiens chromosome 5 clone CTD-2382P15, comp... 40 8.3
39dbj|AK159448.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 8.3
40dbj|AK159422.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 8.3
41dbj|AK160103.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 8.3
42dbj|AK159633.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 8.3
43dbj|AK170318.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.3
44dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 40 8.3
45dbj|AK028858.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 8.3
46dbj|AK028754.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 8.3
47dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
48gb|DQ060036.1| Homo sapiens polymerase (DNA directed) nu (POLN) ... 40 8.3
49emb|BX823964.1|CNS0A5OU Arabidopsis thaliana Full-length cDNA Co... 40 8.3
50gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, com... 40 8.3
51gb|BT002466.1| Arabidopsis thaliana Unknown protein mRNA, comple... 40 8.3
52gb|AF204676.1|AF204676 Arabidopsis thaliana cultivar Columbia gu... 40 8.3
53emb|BX005372.6| Zebrafish DNA sequence from clone DKEY-76K16, co... 40 8.3
54gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, ... 40 8.3
55gb|BC027771.1| Mus musculus pre-B-cell leukemia transcription fa... 40 8.3
56gb|AE003782.4| Drosophila melanogaster chromosome 2L, section 81... 40 8.3
57dbj|AP002379.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.3
58gb|AY613855.1| Oikopleura dioica clone BACOIKO007 10xi11, comple... 40 8.3
59dbj|AP003730.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.3
60gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, c... 40 8.3
61gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, compl... 40 8.3
62gb|AC145960.3| Gallus gallus BAC clone CH261-18H1 from chromosom... 40 8.3
63gb|AC147598.2| Gallus gallus BAC clone CH261-121K14 from chromos... 40 8.3
64emb|Z49862.1|HSL58B6 Human DNA sequence from clone LA04NC01-58B6... 40 8.3
65emb|Z81098.1|CEK07A12 Caenorhabditis elegans Cosmid K07A12, comp... 40 8.3
66dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.3
67dbj|AP006647.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.3 
>emb|CR388175.9| Zebrafish DNA sequence from clone DKEY-63B1 in linkage group 20,
             complete sequence
          Length = 207204

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 70    atctggtttttgttattttcttt 92
             |||||||||||||||||||||||
Sbjct: 22915 atctggtttttgttattttcttt 22937
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>gb|AC148485.10| Medicago truncatula clone mth2-46j5, complete sequence
          Length = 111045

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 82   ttattttctttgaaaaaattgtattgattt 111
            ||||||||||| ||||||||| ||||||||
Sbjct: 4751 ttattttctttaaaaaaattgaattgattt 4722
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>emb|AL607127.12| Mouse DNA sequence from clone RP23-196B19 on chromosome 11, complete
             sequence
          Length = 79389

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 73    tggtttttgttattttctttgaaaaa 98
             ||||||||||| ||||||||||||||
Sbjct: 56175 tggtttttgtttttttctttgaaaaa 56150
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>gb|AE014850.1| Plasmodium falciparum 3D7 chromosome 12, section 7 of 9 of the complete
              sequence
          Length = 250713

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 327    tcatcatcatcttctaaagaa 347
              |||||||||||||||||||||
Sbjct: 160658 tcatcatcatcttctaaagaa 160638
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>gb|AC104856.19| Mus musculus chromosome 5, clone RP23-53G23, complete sequence
          Length = 169800

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 75     gtttttgttattttctttgaa 95
              |||||||||||||||||||||
Sbjct: 134685 gtttttgttattttctttgaa 134705



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    gtttttgttattttctttgaa 95
             |||||||||||||||||||||
Sbjct: 61888 gtttttgttattttctttgaa 61868
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>ref|NM_177256.2| Mus musculus peroxiredoxin 6, related sequence 1 (Prdx6-rs1), mRNA
          Length = 2884

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   ttttctttgaaaaaattgtat 105
            |||||||||||||||||||||
Sbjct: 1302 ttttctttgaaaaaattgtat 1322
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>ref|XM_970797.1| PREDICTED: Tribolium castaneum similar to CG3644-PA, isoform A,
           transcript variant 4 (LOC656401), mRNA
          Length = 747

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 182 gcagacacatctccaccaaat 202
           |||||||||||||||||||||
Sbjct: 634 gcagacacatctccaccaaat 614
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>ref|XM_970760.1| PREDICTED: Tribolium castaneum similar to CG3644-PA, isoform A,
           transcript variant 3 (LOC656401), mRNA
          Length = 822

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 182 gcagacacatctccaccaaat 202
           |||||||||||||||||||||
Sbjct: 636 gcagacacatctccaccaaat 616
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>ref|XM_970705.1| PREDICTED: Tribolium castaneum similar to CG3644-PA, isoform A,
           transcript variant 2 (LOC656401), mRNA
          Length = 921

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 182 gcagacacatctccaccaaat 202
           |||||||||||||||||||||
Sbjct: 738 gcagacacatctccaccaaat 718
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>ref|XM_961249.1| PREDICTED: Tribolium castaneum similar to CG3644-PA, isoform A,
           transcript variant 1 (LOC656401), mRNA
          Length = 774

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 182 gcagacacatctccaccaaat 202
           |||||||||||||||||||||
Sbjct: 688 gcagacacatctccaccaaat 668
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>gb|AC147010.31| Medicago truncatula clone mth2-145p5, complete sequence
          Length = 132320

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 75    gtttttgttattttctttgaaaaaa 99
             ||||||| |||||||||||||||||
Sbjct: 96413 gtttttggtattttctttgaaaaaa 96389
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>gb|AC016933.20| Homo sapiens 3 BAC RP11-166D18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153763

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 82     ttattttctttgaaaaaattgtatt 106
              ||||||||||||||| |||||||||
Sbjct: 124787 ttattttctttgaaacaattgtatt 124811
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>gb|AC159307.2| Mus musculus BAC clone RP23-169J21 from chromosome 12, complete
             sequence
          Length = 190562

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    tgggcagttcaaactcagaag 56
             |||||||||||||||||||||
Sbjct: 71739 tgggcagttcaaactcagaag 71759
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>gb|AC008446.5| Homo sapiens chromosome 5 clone CTC-340A15, complete sequence
          Length = 152232

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    ttattttctttgaaaaaattg 102
             |||||||||||||||||||||
Sbjct: 76855 ttattttctttgaaaaaattg 76835
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>dbj|AK077012.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932409D11 product:peroxiredoxin 5,
            related sequence 1, full insert sequence
          Length = 2884

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   ttttctttgaaaaaattgtat 105
            |||||||||||||||||||||
Sbjct: 1302 ttttctttgaaaaaattgtat 1322
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>emb|AL928587.7| Mouse DNA sequence from clone RP23-282M14 on chromosome 2, complete
              sequence
          Length = 218618

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     ttttctttgaaaaaattgtat 105
              |||||||||||||||||||||
Sbjct: 108329 ttttctttgaaaaaattgtat 108349
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>ref|NM_115615.2| Arabidopsis thaliana AGK2 AT3G57550 (AGK2) transcript variant
            AT3G57550.1 mRNA, complete cds
          Length = 1774

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 321  caatgttcatcatcatcttctaaa 344
            ||||||||||||||||| ||||||
Sbjct: 1569 caatgttcatcatcatcgtctaaa 1546
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>ref|NM_001035800.1| Arabidopsis thaliana AGK2 AT3G57550 (AGK2) transcript variant
            AT3G57550.2 mRNA, complete cds
          Length = 1777

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 321  caatgttcatcatcatcttctaaa 344
            ||||||||||||||||| ||||||
Sbjct: 1572 caatgttcatcatcatcgtctaaa 1549
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     ctctcatgggcagacacatc 192
               ||||||||||||||||||||
Sbjct: 2597183 ctctcatgggcagacacatc 2597164
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>gb|AC013351.7| Drosophila melanogaster clone BACR06H06, complete sequence
          Length = 186935

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ttttgttattttctttgaaa 96
             ||||||||||||||||||||
Sbjct: 94822 ttttgttattttctttgaaa 94803
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>gb|AC018484.5| Drosophila melanogaster clone BACR13A13, complete sequence
          Length = 172746

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ttttgttattttctttgaaa 96
             ||||||||||||||||||||
Sbjct: 20968 ttttgttattttctttgaaa 20949
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>gb|BC034200.1| Mus musculus pre-B-cell leukemia transcription factor interacting
           protein 1, mRNA (cDNA clone MGC:37533 IMAGE:4986595),
           complete cds
          Length = 2438

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 86  gtgctcgctggttctgagaa 105
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>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    tgttattttctttgaaaaaa 99
             ||||||||||||||||||||
Sbjct: 53187 tgttattttctttgaaaaaa 53168
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>ref|NM_146131.1| Mus musculus pre-B-cell leukemia transcription factor interacting
           protein 1 (Pbxip1), mRNA
          Length = 2463

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 115 gtgctcgctggttctgagaa 134
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>gb|AY314864.1| Paragoniocotes sp. VSS-2003 12S ribosomal RNA gene, partial
           sequence; mitochondrial gene for mitochondrial product
          Length = 370

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 76  tttttgttattttctttgaaaaaa 99
           ||||||| ||||||||||||||||
Sbjct: 272 tttttgtaattttctttgaaaaaa 295
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>gb|AC116979.3| Dictyostelium discoideum chromosome 2 map 6445720-6776760 strain AX4,
              complete sequence
          Length = 331039

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 95     aaaaattgtattgatttgtcattt 118
              ||||||||||||||||||| ||||
Sbjct: 283675 aaaaattgtattgatttgtaattt 283652
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>ref|XM_982215.1| PREDICTED: Mus musculus pre-B-cell leukemia transcription factor
           interacting protein 1 (Pbxip1), mRNA
          Length = 3703

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 34  gtgctcgctggttctgagaa 53
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>emb|Z97353.3|HS90L6 Human DNA sequence from clone RP1-90L6 on chromosome 22q11.21-11.23,
              complete sequence
          Length = 190837

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     tggtttttgttattttcttt 92
              ||||||||||||||||||||
Sbjct: 158157 tggtttttgttattttcttt 158138
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>emb|AL161931.13| Human DNA sequence from clone RP11-1021O19 on chromosome 10 Contains
             the 3' end of the ZNF33A gene for zinc finger protein 33a
             (KOX 31), complete sequence
          Length = 19853

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 434   ggacggggtgcataaagagaagga 457
             |||| |||||||||||||||||||
Sbjct: 15231 ggactgggtgcataaagagaagga 15254
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>emb|AL136360.21| Human DNA sequence from clone RP11-317B7 on chromosome 4, complete
             sequence
          Length = 103727

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aatctggtttttgttatttt 88
             ||||||||||||||||||||
Sbjct: 73444 aatctggtttttgttatttt 73425
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>gb|AC164008.2| Mus musculus chromosome 1, clone RP23-311L17, complete sequence
          Length = 171582

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     aaaaaattgtattgatttgt 113
              ||||||||||||||||||||
Sbjct: 162433 aaaaaattgtattgatttgt 162414
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>gb|AC105162.11| Mus musculus chromosome 1, clone RP24-92O11, complete sequence
          Length = 177420

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 43     ttcaaactcagaagatttaagttg 66
              ||||||||||||||||| ||||||
Sbjct: 109630 ttcaaactcagaagattaaagttg 109653
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>gb|AC164291.2| Mus musculus BAC clone RP24-85F23 from chromosome 16, complete sequence
          Length = 237479

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 69     aatctggtttttgttattttcttt 92
              ||||||||||||||| ||||||||
Sbjct: 129792 aatctggtttttgtttttttcttt 129769
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>emb|AL133248.1|ATT8H10 Arabidopsis thaliana DNA chromosome 3, BAC clone T8H10
          Length = 87503

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 321   caatgttcatcatcatcttctaaa 344
             ||||||||||||||||| ||||||
Sbjct: 63095 caatgttcatcatcatcgtctaaa 63072
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>emb|CR848041.4| Zebrafish DNA sequence from clone DKEY-4K21 in linkage group 21, complete
              sequence
          Length = 177962

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     tttgttattttctttgaaaa 97
              ||||||||||||||||||||
Sbjct: 127621 tttgttattttctttgaaaa 127602
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>gb|BC026838.1| Mus musculus pre-B-cell leukemia transcription factor interacting
           protein 1, mRNA (cDNA clone MGC:27544 IMAGE:4460993),
           complete cds
          Length = 2449

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 80  gtgctcgctggttctgagaa 99
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>emb|BX511228.8| Zebrafish DNA sequence from clone DKEY-174F1 in linkage group 21,
             complete sequence
          Length = 64586

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    tttgttattttctttgaaaa 97
             ||||||||||||||||||||
Sbjct: 14932 tttgttattttctttgaaaa 14913
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>gb|AC113344.2| Homo sapiens chromosome 5 clone CTD-2382P15, complete sequence
          Length = 128990

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    tttctttgaaaaaattgtat 105
             ||||||||||||||||||||
Sbjct: 32375 tttctttgaaaaaattgtat 32356
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>dbj|AK159448.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420020F02 product:pre-B-cell leukemia
           transcription factor interacting protein 1, full insert
           sequence
          Length = 2461

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 132 gtgctcgctggttctgagaa 151
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>dbj|AK159422.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420019M04 product:pre-B-cell leukemia
           transcription factor interacting protein 1, full insert
           sequence
          Length = 2461

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 132 gtgctcgctggttctgagaa 151
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>dbj|AK160103.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420049E19 product:pre-B-cell leukemia
           transcription factor interacting protein 1, full insert
           sequence
          Length = 2456

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 126 gtgctcgctggttctgagaa 145
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>dbj|AK159633.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
           library, clone:I420026I05 product:pre-B-cell leukemia
           transcription factor interacting protein 1, full insert
           sequence
          Length = 2452

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 122 gtgctcgctggttctgagaa 141
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>dbj|AK170318.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630046N07
           product:pre-B-cell leukemia transcription factor
           interacting protein 1, full insert sequence
          Length = 2431

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 101 gtgctcgctggttctgagaa 120
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tattttctttgaaaaaattg 102
              ||||||||||||||||||||
Sbjct: 935281 tattttctttgaaaaaattg 935300
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>dbj|AK028858.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732463H20 product:similar to
           HEMATOPOIETIC PBX-INTERACTING PROTEIN [Homo sapiens],
           full insert sequence
          Length = 2472

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 143 gtgctcgctggttctgagaa 162
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>dbj|AK028754.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732452L17 product:similar to
           HEMATOPOIETIC PBX-INTERACTING PROTEIN [Homo sapiens],
           full insert sequence
          Length = 2437

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 106 gtgctcgctggttctgagaa 125
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 80       tgttattttctttgaaaaaa 99
                ||||||||||||||||||||
Sbjct: 26408496 tgttattttctttgaaaaaa 26408477
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>gb|DQ060036.1| Homo sapiens polymerase (DNA directed) nu (POLN) gene, complete cds
          Length = 161222

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     aatctggtttttgttatttt 88
              ||||||||||||||||||||
Sbjct: 130984 aatctggtttttgttatttt 130965
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>emb|BX823964.1|CNS0A5OU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH10ZF10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1750

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 321  caatgttcatcatcatcttctaaa 344
            ||||||||||||||||| ||||||
Sbjct: 1567 caatgttcatcatcatcgtctaaa 1544
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>gb|AC102703.16| Mus musculus chromosome 1, clone RP24-442E5, complete sequence
          Length = 197439

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     aaaaaattgtattgatttgt 113
              ||||||||||||||||||||
Sbjct: 142521 aaaaaattgtattgatttgt 142540
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>gb|BT002466.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1679

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 321  caatgttcatcatcatcttctaaa 344
            ||||||||||||||||| ||||||
Sbjct: 1480 caatgttcatcatcatcgtctaaa 1457
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>gb|AF204676.1|AF204676 Arabidopsis thaliana cultivar Columbia guanylate kinase (GK-2) mRNA,
            complete cds
          Length = 1852

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 321  caatgttcatcatcatcttctaaa 344
            ||||||||||||||||| ||||||
Sbjct: 1569 caatgttcatcatcatcgtctaaa 1546
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>emb|BX005372.6| Zebrafish DNA sequence from clone DKEY-76K16, complete sequence
          Length = 199736

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    aaaaaattgtattgatttgt 113
             ||||||||||||||||||||
Sbjct: 46133 aaaaaattgtattgatttgt 46114
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>gb|AF205588.1|AF205588 Homo sapiens ZNF01 and HUMORFKG1B genes, partial sequence, complete
              sequence
          Length = 312283

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 434    ggacggggtgcataaagagaagga 457
              |||| |||||||||||||||||||
Sbjct: 256073 ggactgggtgcataaagagaagga 256096
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>gb|BC027771.1| Mus musculus pre-B-cell leukemia transcription factor interacting
           protein 1, mRNA (cDNA clone MGC:38361 IMAGE:5344900),
           complete cds
          Length = 2463

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 gtgctcgctggttctgagaa 231
           ||||||||||||||||||||
Sbjct: 115 gtgctcgctggttctgagaa 134
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>gb|AE003782.4| Drosophila melanogaster chromosome 2L, section 81 of 83 of the complete
              sequence
          Length = 298116

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     ttttgttattttctttgaaa 96
              ||||||||||||||||||||
Sbjct: 239676 ttttgttattttctttgaaa 239657
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>dbj|AP002379.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-463F4, complete
              sequence
          Length = 215986

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ttattttctttgaaaaaatt 101
              ||||||||||||||||||||
Sbjct: 124147 ttattttctttgaaaaaatt 124128
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>gb|AY613855.1| Oikopleura dioica clone BACOIKO007 10xi11, complete sequence
          Length = 104968

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tttttgttattttctttgaa 95
             ||||||||||||||||||||
Sbjct: 92842 tttttgttattttctttgaa 92823
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>dbj|AP003730.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-379J13, complete
              sequences
          Length = 226171

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ttattttctttgaaaaaatt 101
              ||||||||||||||||||||
Sbjct: 207262 ttattttctttgaaaaaatt 207243
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>gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, complete sequence
          Length = 195993

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    atttgtcatttgcctagagt 127
              ||||||||||||||||||||
Sbjct: 133073 atttgtcatttgcctagagt 133092
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>gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, complete sequence
          Length = 173965

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 307    tgtttccatgtcgacaatgttcat 330
              |||||||||||| |||||||||||
Sbjct: 115236 tgtttccatgtcaacaatgttcat 115213
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>gb|AC145960.3| Gallus gallus BAC clone CH261-18H1 from chromosome unknown, complete
              sequence
          Length = 204548

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ttattttctttgaaaaaatt 101
              ||||||||||||||||||||
Sbjct: 166305 ttattttctttgaaaaaatt 166286
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>gb|AC147598.2| Gallus gallus BAC clone CH261-121K14 from chromosome unknown, complete
              sequence
          Length = 197142

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     ttattttctttgaaaaaatt 101
              ||||||||||||||||||||
Sbjct: 182315 ttattttctttgaaaaaatt 182334
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>emb|Z49862.1|HSL58B6 Human DNA sequence from clone LA04NC01-58B6 on chromosome 4, complete
             sequence
          Length = 28142

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    aatctggtttttgttatttt 88
             ||||||||||||||||||||
Sbjct: 15616 aatctggtttttgttatttt 15597
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>emb|Z81098.1|CEK07A12 Caenorhabditis elegans Cosmid K07A12, complete sequence
          Length = 29106

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   ttgttattttctttgaaaaa 98
            ||||||||||||||||||||
Sbjct: 6437 ttgttattttctttgaaaaa 6418
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>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587,
             complete sequence
          Length = 110885

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tggtttttgttattttcttt 92
             ||||||||||||||||||||
Sbjct: 80270 tggtttttgttattttcttt 80251
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>dbj|AP006647.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT29F18, TM0312,
             complete sequence
          Length = 119276

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   aatgttcatcatcatcttct 341
             ||||||||||||||||||||
Sbjct: 30241 aatgttcatcatcatcttct 30260


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,395,680
Number of Sequences: 3902068
Number of extensions: 6395680
Number of successful extensions: 149419
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 149215
Number of HSP's gapped (non-prelim): 204
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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