ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2i08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
2dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
3dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
4dbj|AK060239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 8e-21
5ref|NM_116336.2| Arabidopsis thaliana DNA binding / transcriptio... 52 0.002
6ref|NM_001036490.1| Arabidopsis thaliana DNA binding / transcrip... 52 0.002
7ref|NM_202764.1| Arabidopsis thaliana DNA binding / transcriptio... 52 0.002
8gb|AY519522.1| Arabidopsis thaliana MYB transcription factor (At... 52 0.002
9emb|BX828755.1|CNS0A2LX Arabidopsis thaliana Full-length cDNA Co... 52 0.002
10gb|BT005611.1| Arabidopsis thaliana clone U50786 putative myb fa... 52 0.002
11gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 52 0.002
12dbj|AK118043.1| Arabidopsis thaliana mRNA for unknown protein, c... 52 0.002
13gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece 48 0.025
14emb|BX826597.1|CNS0A37B Arabidopsis thaliana Full-length cDNA Co... 48 0.025
15gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, com... 44 0.40
16emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, c... 44 0.40
17gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01 44 0.40
18ref|NM_025729.3| Mus musculus RIKEN cDNA 4921526G09 gene (492152... 42 1.6
19ref|XM_390467.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 42 1.6
20gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, co... 42 1.6
21dbj|AK220185.1| Mus musculus mRNA for mKIAA4135 protein 42 1.6
22emb|BX470157.6| Zebrafish DNA sequence from clone CH211-119P14 i... 42 1.6
23emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in ... 42 1.6
24ref|XM_696979.1| PREDICTED: Danio rerio hypothetical protein LOC... 42 1.6
25dbj|AK041800.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 1.6
26dbj|AK048222.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 1.6
27gb|BC044423.1| Danio rerio Nedd4 family interacting protein 1, m... 42 1.6
28gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, c... 42 1.6
29ref|NM_199666.1| Danio rerio Nedd4 family interacting protein 1 ... 42 1.6
30emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chro... 42 1.6
31ref|XM_642468.1| Dictyostelium discoideum hypothetical protein (... 40 6.2
32emb|AL032649.1|CEY55D9A Caenorhabditis elegans YAC Y55D9A, compl... 40 6.2
33emb|Z92542.2|HS245G19 Human DNA sequence from clone RP1-245G19 o... 40 6.2
34emb|AL357123.11| Human DNA sequence from clone RP11-287E6 on chr... 40 6.2
35emb|AL137026.21| Human DNA sequence from clone RP11-20J15 on chr... 40 6.2
36emb|X65054.1|CEPGPAG C.elegans cepgpA gene for P-glycoprotein A 40 6.2
37emb|X57841.1|SSSPAGEN S.sobrinus spaA gene for antigen I/II 40 6.2
38emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 ... 40 6.2
39emb|BX821764.1|CNS0AA9S Arabidopsis thaliana Full-length cDNA Co... 40 6.2
40emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 ma... 40 6.2 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                            
Query: 228      caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 287
                |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 24692908 caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 24692849

                                   
Query: 288      ctgggcaaaaaagcaccag 306
                |||||||  ||||||||||
Sbjct: 24692848 ctgggcagtaaagcaccag 24692830



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                            
Query: 229      aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 288
                |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 24666459 aggtgggaacttatagctggaagaatacccggaaggacagcagaagaagtagagaagttc 24666400

                   
Query: 289      tgg 291
                |||
Sbjct: 24666399 tgg 24666397



 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                            
Query: 229      aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 288
                |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 24639421 aggtgggaacttatagctggaagaataccgggaaggacagcagaagaagtagagaagttc 24639362

                       
Query: 289      tgggcaa 295
                |||||||
Sbjct: 24639361 tgggcaa 24639355



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                            
Query: 141      agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 200
                ||||||||||| ||  ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 24693187 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 24693128

                                                
Query: 201      tttcagaatgcacagacttgtcgggaacaggt 232
                ||||||||||||||| ||||| ||||||||||
Sbjct: 24693127 tttcagaatgcacaggcttgttgggaacaggt 24693096



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 164      attttgttgatttcacggaggcagaggaagatcttgttttcagaatgcacagacttgtcg 223
                |||||||| ||||||| || | |||||||||| ||||||||||||||||||| |||||||
Sbjct: 24639671 attttgttcatttcacagaagaagaggaagatattgttttcagaatgcacaggcttgtcg 24639612

                         
Query: 224      ggaacaggt 232
                |||||||||
Sbjct: 24639611 ggaacaggt 24639603



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                            
Query: 141      agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 200
                ||||||||||||||  ||| || |||||||| |||||||  | | |||||||||||||||
Sbjct: 24673894 agaagttaatagcactgcacagaattttgttcatttcacataagaagaggaagatcttgt 24673835

                                                
Query: 201      tttcagaatgcacagacttgtcgggaacaggt 232
                | ||||||||||||| ||||| ||||||||||
Sbjct: 24673834 tatcagaatgcacaggcttgttgggaacaggt 24673803
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>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1040D09
          Length = 148102

 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                          
Query: 228    caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 287
              |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 118871 caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 118812

                                 
Query: 288    ctgggcaaaaaagcaccag 306
              |||||||  ||||||||||
Sbjct: 118811 ctgggcagtaaagcaccag 118793



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                         
Query: 229   aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 288
             |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 92422 aggtgggaacttatagctggaagaatacccggaaggacagcagaagaagtagagaagttc 92363

                
Query: 289   tgg 291
             |||
Sbjct: 92362 tgg 92360



 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                         
Query: 229   aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 288
             |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 65384 aggtgggaacttatagctggaagaataccgggaaggacagcagaagaagtagagaagttc 65325

                    
Query: 289   tgggcaa 295
             |||||||
Sbjct: 65324 tgggcaa 65318



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                          
Query: 141    agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 200
              ||||||||||| ||  ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 119150 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 119091

                                              
Query: 201    tttcagaatgcacagacttgtcgggaacaggt 232
              ||||||||||||||| ||||| ||||||||||
Sbjct: 119090 tttcagaatgcacaggcttgttgggaacaggt 119059



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                         
Query: 164   attttgttgatttcacggaggcagaggaagatcttgttttcagaatgcacagacttgtcg 223
             |||||||| ||||||| || | |||||||||| ||||||||||||||||||| |||||||
Sbjct: 65634 attttgttcatttcacagaagaagaggaagatattgttttcagaatgcacaggcttgtcg 65575

                      
Query: 224   ggaacaggt 232
             |||||||||
Sbjct: 65574 ggaacaggt 65566



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                         
Query: 141   agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 200
             ||||||||||||||  ||| || |||||||| |||||||  | | |||||||||||||||
Sbjct: 99857 agaagttaatagcactgcacagaattttgttcatttcacataagaagaggaagatcttgt 99798

                                             
Query: 201   tttcagaatgcacagacttgtcgggaacaggt 232
             | ||||||||||||| ||||| ||||||||||
Sbjct: 99797 tatcagaatgcacaggcttgttgggaacaggt 99766
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>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0407B12
          Length = 148762

 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                         
Query: 228   caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 287
             |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 61485 caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 61426

                                
Query: 288   ctgggcaaaaaagcaccag 306
             |||||||  ||||||||||
Sbjct: 61425 ctgggcagtaaagcaccag 61407



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                         
Query: 229   aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 288
             |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||
Sbjct: 35036 aggtgggaacttatagctggaagaatacccggaaggacagcagaagaagtagagaagttc 34977

                
Query: 289   tgg 291
             |||
Sbjct: 34976 tgg 34974



 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                        
Query: 229  aggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgttc 288
            |||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||
Sbjct: 7998 aggtgggaacttatagctggaagaataccgggaaggacagcagaagaagtagagaagttc 7939

                   
Query: 289  tgggcaa 295
            |||||||
Sbjct: 7938 tgggcaa 7932



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 141   agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 200
             ||||||||||| ||  ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 61764 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 61705

                                             
Query: 201   tttcagaatgcacagacttgtcgggaacaggt 232
             ||||||||||||||| ||||| ||||||||||
Sbjct: 61704 tttcagaatgcacaggcttgttgggaacaggt 61673



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                        
Query: 164  attttgttgatttcacggaggcagaggaagatcttgttttcagaatgcacagacttgtcg 223
            |||||||| ||||||| || | |||||||||| ||||||||||||||||||| |||||||
Sbjct: 8248 attttgttcatttcacagaagaagaggaagatattgttttcagaatgcacaggcttgtcg 8189

                     
Query: 224  ggaacaggt 232
            |||||||||
Sbjct: 8188 ggaacaggt 8180



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                         
Query: 141   agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 200
             ||||||||||||||  ||| || |||||||| |||||||  | | |||||||||||||||
Sbjct: 42471 agaagttaatagcactgcacagaattttgttcatttcacataagaagaggaagatcttgt 42412

                                             
Query: 201   tttcagaatgcacagacttgtcgggaacaggt 232
             | ||||||||||||| ||||| ||||||||||
Sbjct: 42411 tatcagaatgcacaggcttgttgggaacaggt 42380
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>dbj|AK060239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-D06, full
            insert sequence
          Length = 1262

 Score =  109 bits (55), Expect = 8e-21
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                        
Query: 228  caggtgggaacttatagctggaagaatccccggaagaacagcagaagaagtagagatgtt 287
            |||||||||||||||||||||||||||||| |||||||||||| |||| ||||| |||||
Sbjct: 996  caggtgggaacttatagctggaagaatccctggaagaacagcaaaagaggtagaaatgtt 1055

                               
Query: 288  ctgggcaaaaaagcaccag 306
            |||||||  ||||||||||
Sbjct: 1056 ctgggcagtaaagcaccag 1074



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 81/92 (88%)
 Strand = Plus / Plus

                                                                       
Query: 141 agaagttaatagcaacgcaaagcattttgttgatttcacggaggcagaggaagatcttgt 200
           ||||||||||| ||  ||| || |||||||| |||||||||| | |||||||||||| ||
Sbjct: 717 agaagttaataacactgcacagaattttgttcatttcacggaagaagaggaagatctcgt 776

                                           
Query: 201 tttcagaatgcacagacttgtcgggaacaggt 232
           ||||||||||||||| ||||| ||||||||||
Sbjct: 777 tttcagaatgcacaggcttgttgggaacaggt 808
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>ref|NM_116336.2| Arabidopsis thaliana DNA binding / transcription factor AT4G01060
           transcript variant AT4G01060.1 mRNA, complete cds
          Length = 341

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 217 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 266
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 147 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 196
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>ref|NM_001036490.1| Arabidopsis thaliana DNA binding / transcription factor AT4G01060
           transcript variant AT4G01060.3 mRNA, complete cds
          Length = 388

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 217 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 266
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 198 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 247
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>ref|NM_202764.1| Arabidopsis thaliana DNA binding / transcription factor AT4G01060
           transcript variant AT4G01060.2 mRNA, complete cds
          Length = 405

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 217 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 266
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 198 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 247
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>gb|AY519522.1| Arabidopsis thaliana MYB transcription factor (At4g01060) mRNA,
           complete cds
          Length = 228

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 217 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 266
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 139 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 188
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>emb|BX828755.1|CNS0A2LX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL36ZE02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 405

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 217 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 266
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 198 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 247
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>gb|BT005611.1| Arabidopsis thaliana clone U50786 putative myb family transcription
           factor (At4g01060) mRNA, complete cds
          Length = 265

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 217 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 266
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 145 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 194
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>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 431   tgttaggaataagcaacttgtattcc 456
             ||||||||||||||||||||||||||
Sbjct: 47090 tgttaggaataagcaacttgtattcc 47115
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>dbj|AK118043.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone:
           RAFL19-27-F14
          Length = 341

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 217 cttgtcgggaacaggtgggaacttatagctggaagaatccccggaagaac 266
           ||||||||  ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 147 cttgtcggtgacaggtgggaactgatagctgggaggatcccaggaagaac 196
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>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece
          Length = 120562

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 431   tgttaggaataagcaacttgtattccca 458
             ||||||||||| ||||||||||||||||
Sbjct: 58439 tgttaggaatatgcaacttgtattccca 58412



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 431   tgttaggaataagcaacttgtattccca 458
             ||||||||||| ||||||||||||||||
Sbjct: 53982 tgttaggaatatgcaacttgtattccca 53955
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>emb|BX826597.1|CNS0A37B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB45ZF07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 388

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 227 acaggtgggaacttatagctggaagaatccccggaagaac 266
           ||||||||||||| |||||||| || ||||| ||||||||
Sbjct: 208 acaggtgggaactgatagctgggaggatcccaggaagaac 247
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>gb|AC104203.11| Mus musculus chromosome 5, clone RP24-301M6, complete sequence
          Length = 174779

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 419    catgctaaaagctgttaggaat 440
              ||||||||||||||||||||||
Sbjct: 126564 catgctaaaagctgttaggaat 126543
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>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3
          Length = 196149

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 229   aggtgggaacttatagctggaagaatccccggaagaac 266
             ||||||||||| |||||||| || ||||| ||||||||
Sbjct: 74604 aggtgggaactgatagctgggaggatcccaggaagaac 74641
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>gb|AF007269.1|IG002N01 Arabidopsis thaliana BAC IG002N01
          Length = 124225

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 229    aggtgggaacttatagctggaagaatccccggaagaac 266
              ||||||||||| |||||||| || ||||| ||||||||
Sbjct: 113091 aggtgggaactgatagctgggaggatcccaggaagaac 113054
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>ref|NM_025729.3| Mus musculus RIKEN cDNA 4921526G09 gene (4921526G09Rik), mRNA
          Length = 6209

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 359  gggtgctttttcctgtccatc 379
            |||||||||||||||||||||
Sbjct: 2920 gggtgctttttcctgtccatc 2900
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>ref|XM_390467.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10291.1)
           partial mRNA
          Length = 2085

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 257 ccggaagaacagcagaagaag 277
           |||||||||||||||||||||
Sbjct: 509 ccggaagaacagcagaagaag 529
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>gb|AC158747.3| Mus musculus chromosome 15, clone RP24-248P22, complete sequence
          Length = 156293

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   tcttgttttcagaatgcacag 215
             |||||||||||||||||||||
Sbjct: 47292 tcttgttttcagaatgcacag 47272
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>dbj|AK220185.1| Mus musculus mRNA for mKIAA4135 protein
          Length = 6209

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 359  gggtgctttttcctgtccatc 379
            |||||||||||||||||||||
Sbjct: 2920 gggtgctttttcctgtccatc 2900
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>emb|BX470157.6| Zebrafish DNA sequence from clone CH211-119P14 in linkage group 14,
             complete sequence
          Length = 201228

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   gaatccccggaagaacagcag 271
             |||||||||||||||||||||
Sbjct: 62300 gaatccccggaagaacagcag 62280
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>emb|BX530085.3| Zebrafish DNA sequence from clone DKEY-18A21 in linkage group 14,
             complete sequence
          Length = 227326

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 251   gaatccccggaagaacagcag 271
             |||||||||||||||||||||
Sbjct: 53664 gaatccccggaagaacagcag 53644
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>ref|XM_696979.1| PREDICTED: Danio rerio hypothetical protein LOC555019 (LOC555019),
           mRNA
          Length = 1079

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 251 gaatccccggaagaacagcag 271
           |||||||||||||||||||||
Sbjct: 27  gaatccccggaagaacagcag 7
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>dbj|AK041800.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A630039A19 product:inferred: RIKEN cDNA
           4921526G09 gene, full insert sequence
          Length = 1173

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 359 gggtgctttttcctgtccatc 379
           |||||||||||||||||||||
Sbjct: 653 gggtgctttttcctgtccatc 633
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>dbj|AK048222.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130041B08 product:hypothetical protein,
           full insert sequence
          Length = 3530

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 359 gggtgctttttcctgtccatc 379
           |||||||||||||||||||||
Sbjct: 100 gggtgctttttcctgtccatc 80
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>gb|BC044423.1| Danio rerio Nedd4 family interacting protein 1, mRNA (cDNA clone
           MGC:55546 IMAGE:2642703), complete cds
          Length = 1805

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 251 gaatccccggaagaacagcag 271
           |||||||||||||||||||||
Sbjct: 714 gaatccccggaagaacagcag 694
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>gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, complete sequence
          Length = 189238

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 195   tcttgttttcagaatgcacag 215
             |||||||||||||||||||||
Sbjct: 83975 tcttgttttcagaatgcacag 83995
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>ref|NM_199666.1| Danio rerio Nedd4 family interacting protein 1 (ndfip1), mRNA
          Length = 1805

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 251 gaatccccggaagaacagcag 271
           |||||||||||||||||||||
Sbjct: 714 gaatccccggaagaacagcag 694
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>emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chromosome X, complete
             sequence
          Length = 111339

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 359   gggtgctttttcctgtccatc 379
             |||||||||||||||||||||
Sbjct: 29673 gggtgctttttcctgtccatc 29653
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>ref|XM_642468.1| Dictyostelium discoideum hypothetical protein (DDB0189785), partial
            mRNA
          Length = 1113

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  gtgaaagaaaagaagttaat 150
            ||||||||||||||||||||
Sbjct: 995  gtgaaagaaaagaagttaat 1014
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>emb|AL032649.1|CEY55D9A Caenorhabditis elegans YAC Y55D9A, complete sequence
          Length = 16966

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  aaagcattttgttgatttca 178
            ||||||||||||||||||||
Sbjct: 2021 aaagcattttgttgatttca 2040
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>emb|Z92542.2|HS245G19 Human DNA sequence from clone RP1-245G19 on chromosome Xp22.11-22.2
              Contains the 3' end of the CDKL5 gene for cyclin-dependent
              kinase-like 5, the 3' end of the RS1 gene for retinoschisis
              (X-linked, juvenile) 1, and a gap junction protein, alpha
              2, 38kDa (connexin 38) (GJA2) pseudogene, complete sequence
          Length = 145538

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 311    aatgaaagggaaagcaggat 330
              ||||||||||||||||||||
Sbjct: 138899 aatgaaagggaaagcaggat 138880
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>emb|AL357123.11| Human DNA sequence from clone RP11-287E6 on chromosome Xq26.3-27.3,
             complete sequence
          Length = 72354

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   gaaagaaaagaagttaatag 152
             ||||||||||||||||||||
Sbjct: 42290 gaaagaaaagaagttaatag 42271
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>emb|AL137026.21| Human DNA sequence from clone RP11-20J15 on chromosome 10 Contains CXCL12
              gene for chemokine (C-X-C motif) ligand 12 (stromal
              cell-derived factor 1), two putative transcripts and two
              putative CpG islands, complete sequence
          Length = 184474

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    aacagcagaagaagtagaga 283
              ||||||||||||||||||||
Sbjct: 140306 aacagcagaagaagtagaga 140325
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>emb|X65054.1|CEPGPAG C.elegans cepgpA gene for P-glycoprotein A
          Length = 9815

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 aaagcattttgttgatttca 178
           ||||||||||||||||||||
Sbjct: 110 aaagcattttgttgatttca 91
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>emb|X57841.1|SSSPAGEN S.sobrinus spaA gene for antigen I/II
          Length = 4753

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 76   agcaagcatatgagcagcaa 95
            ||||||||||||||||||||
Sbjct: 1374 agcaagcatatgagcagcaa 1393
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>emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 in linkage group 24,
             complete sequence
          Length = 177516

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   aaagaaaagaagttaatagc 153
             ||||||||||||||||||||
Sbjct: 24295 aaagaaaagaagttaatagc 24314
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>emb|BX821764.1|CNS0AA9S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL72ZA02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 445

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 205 agaatgcacagacttgtcgggaacaggtggga 236
           ||||||||||||||||| ||  ||||||||||
Sbjct: 197 agaatgcacagacttgttggcgacaggtggga 228
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>emb|CT025634.2| Pan troglodytes chromosome X clone PTB-037N22 map Xq28, complete sequence
          Length = 145822

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    aatgaaagggaaagcaggat 330
              ||||||||||||||||||||
Sbjct: 124981 aatgaaagggaaagcaggat 125000


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,475,000
Number of Sequences: 3902068
Number of extensions: 5475000
Number of successful extensions: 103823
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103733
Number of HSP's gapped (non-prelim): 90
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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