Clone Name | basd2i03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HMOC_DROME (P22810) Homeotic protein ocelliless (Protein orthode... | 28 | 4.4 | 2 | VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A) | 28 | 7.5 | 3 | POF3_SCHPO (O74991) F-box/TPR-repeat protein pof3 | 27 | 9.8 | 4 | FLNB_MOUSE (Q80X90) Filamin-B (FLN-B) (Beta-filamin) (Actin-bind... | 27 | 9.8 |
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>HMOC_DROME (P22810) Homeotic protein ocelliless (Protein orthodenticle)| Length = 671 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 3/58 (5%) Frame = +2 Query: 8 HHHPSRASCERKCS---HWRDPARKEQCVQQCMRYGLNLXXXXXXXXIERPHAXEVEV 172 H HPSRA C R+ S W R+ C Y N ++R V V Sbjct: 535 HRHPSRAPCPRRPSPRTAWITCRRRISTRIWCRIYSSNTAAVAATTTVQRGQVVRVRV 592
>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)| Length = 605 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/23 (43%), Positives = 18/23 (78%), Gaps = 2/23 (8%) Frame = +2 Query: 32 CERKCSHWRD--PARKEQCVQQC 94 C+++C W++ P RK+QCV++C Sbjct: 125 CQQRCQ-WQEQRPERKQQCVKEC 146
>POF3_SCHPO (O74991) F-box/TPR-repeat protein pof3| Length = 577 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +2 Query: 20 SRASCERKCSHWRDPARKEQCVQQCMRY 103 S C + C HWRD +KE + C+ + Sbjct: 155 SIVQCMQVCKHWRDCIKKEPSLFCCLDF 182
>FLNB_MOUSE (Q80X90) Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like| protein) (ABP-280-like protein) Length = 2602 Score = 27.3 bits (59), Expect = 9.8 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +2 Query: 140 IERPHAXEVEVDDQSNDSCDHK 205 IE P ++E DDQ++ SCD K Sbjct: 586 IEGPSQAKIEYDDQNDGSCDVK 607 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,969,246 Number of Sequences: 219361 Number of extensions: 456373 Number of successful extensions: 1158 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1158 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)