ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2h09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR... 920 0.0
2gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR... 920 0.0
3gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA 833 0.0
4gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for... 638 e-180
5gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form... 618 e-174
6gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5... 575 e-161
7dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ... 535 e-149
8dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon... 535 e-149
9dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon... 535 e-149
10dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon... 535 e-149
11dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s... 535 e-149
12dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l... 535 e-149
13dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 527 e-146
14gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb... 515 e-143
15gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c... 446 e-122
16gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA... 410 e-111
17dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon... 400 e-108
18gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox... 331 1e-87
19gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ... 319 5e-84
20gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ... 319 5e-84
21gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ... 311 1e-81
22gb|AY110044.1| Zea mays CL1146_1 mRNA sequence 272 1e-69
23gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome... 270 4e-69
24gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome... 270 4e-69
25dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 270 4e-69
26gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph... 270 4e-69
27gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 270 4e-69
28gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ... 246 6e-62
29gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox... 244 2e-61
30gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb... 242 9e-61
31ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2... 232 9e-58
32ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2... 232 9e-58
33ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2... 232 9e-58
34gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)... 232 9e-58
35gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730... 232 9e-58
36gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp... 232 9e-58
37gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl... 232 9e-58
38gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl... 232 9e-58
39gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730... 232 9e-58
40gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se... 232 9e-58
41gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph... 226 5e-56
42gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec... 224 2e-55
43gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur... 222 8e-55
44gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds 222 8e-55
45gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c... 212 8e-52
46gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA... 212 8e-52
47gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso... 212 8e-52
48gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre... 204 2e-49
49gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1... 190 3e-45
50emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha... 182 7e-43
51emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase 180 3e-42
52gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m... 180 3e-42
53emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car... 163 7e-37
54gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence 159 1e-35
55emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis... 149 1e-32
56gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/... 105 1e-19
57gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate... 98 3e-17
58gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur... 96 1e-16
59gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part... 92 2e-15
60gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ... 86 1e-13
61emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase 86 1e-13
62gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha... 86 1e-13
63gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s... 80 8e-12
64gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se... 78 3e-11
65gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se... 78 3e-11
66emb|Y10657.1|CLRCAGENE C.littorale rca gene 66 1e-07
67gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car... 54 4e-04
68gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ... 46 0.11
69gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 46 0.11
70gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 44 0.42
71gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence 44 0.42
72gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen... 44 0.42
73gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen... 44 0.42
74gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen... 44 0.42
75gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen... 44 0.42
76gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen... 44 0.42
77gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen... 44 0.42
78gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen... 44 0.42
79gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen... 44 0.42
80gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen... 44 0.42
81gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen... 44 0.42
82gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen... 44 0.42
83gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen... 44 0.42
84gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen... 44 0.42
85gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen... 44 0.42
86gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom... 44 0.42
87gb|AC005330.2|AC005330 Homo sapiens chromosome 19, cosmid R34047... 42 1.7
88gb|AE010322.1| Methanopyrus kandleri AV19 section 21 of 157 of t... 40 6.5
89gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 6.5
90ref|XM_520373.1| PREDICTED: Pan troglodytes LOC464867 (LOC464867... 40 6.5
91gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 40 6.5
92ref|NM_017617.2| Homo sapiens Notch homolog 1, translocation-ass... 40 6.5
93gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC... 40 6.5
94gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, com... 40 6.5
95emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chr... 40 6.5
96gb|AC104422.4| Homo sapiens chromosome 18, clone RP11-260B14, co... 40 6.5
97gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, comple... 40 6.5
98gb|AC100806.2| Homo sapiens chromosome 18, clone CTB-2341H11, co... 40 6.5
99gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 ... 40 6.5
100gb|AF308602.1|AF308602 Homo sapiens NOTCH 1 (N1) mRNA, complete cds 40 6.5
101dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.5
102gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 6.5
103ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 ... 40 6.5
104emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chr... 40 6.5
105emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 6.5
106gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltrans... 40 6.5
107gb|M73980.1|HUMTAN1 Human TAN-1 mRNA (homologue of Drosophila No... 40 6.5

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  920 bits (464), Expect = 0.0
 Identities = 480/484 (99%), Gaps = 1/484 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 282 ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgctaccga 341

                                                                       
Query: 61  tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 401

                                                                       
Query: 121 ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 461

                                                                       
Query: 181 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 521

                                                                       
Query: 241 catggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 catggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagat 581

                                                                       
Query: 301 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagct 641

                                                                       
Query: 361 tgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctgggagagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 642 tgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagct-ggagagtg 700

                                                                       
Query: 421 ggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatga 760

               
Query: 481 tcaa 484
           ||||
Sbjct: 761 tcaa 764



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>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  920 bits (464), Expect = 0.0
 Identities = 480/484 (99%), Gaps = 1/484 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 27  ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgctaccga 86

                                                                       
Query: 61  tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 146

                                                                       
Query: 121 ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 206

                                                                       
Query: 181 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 266

                                                                       
Query: 241 catggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 catggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagat 326

                                                                       
Query: 301 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagct 386

                                                                       
Query: 361 tgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctgggagagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 387 tgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagct-ggagagtg 445

                                                                       
Query: 421 ggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatga 505

               
Query: 481 tcaa 484
           ||||
Sbjct: 506 tcaa 509



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>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  833 bits (420), Expect = 0.0
 Identities = 469/484 (96%), Gaps = 1/484 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggcagcggaaaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 261

                                                                       
Query: 61  tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 262 tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactccctcttcca 321

                                                                       
Query: 121 ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 180
           ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 322 ggcgcccactggcgacggcacccacgaggccgtcctcagctcatacgagtacgtcagcca 381

                                                                       
Query: 181 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 240
           ||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gggactcaagaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 441

                                                                       
Query: 241 catggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagat 300
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 442 catggacaagcttgttgtccatctctccaagaacttcatgaccctgcccaacatcaagat 501

                                                                       
Query: 301 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagct 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 502 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatccttccagtgtgagct 561

                                                                       
Query: 361 tgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctgggagagtg 420
           ||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 562 tgtcttcgccaagatgggcatcaacccaatcatgatgagtgccggagagct-ggagagtg 620

                                                                       
Query: 421 ggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatga 480
           | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaacgccggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatga 680

               
Query: 481 tcaa 484
           ||||
Sbjct: 681 tcaa 684



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>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  638 bits (322), Expect = e-180
 Identities = 419/450 (93%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || 
Sbjct: 257 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 316

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           ||||| ||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 317 aagggtatcgtcgactccctgttccaggcgcccatgggcgatggcacccacgaggccgtc 376

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct: 377 ctcagctcctacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 436

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 437 ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 496

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggt 556

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 557 caggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatg 616

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 617 atgagtgccggagagct-ggagagcggcaacgccggagagccagccaagctcatcaggca 675

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||| ||||| ||||||||||||||
Sbjct: 676 gcggtaccgcgaggccgcagacatgatcaa 705



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>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  618 bits (312), Expect = e-174
 Identities = 416/450 (92%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || 
Sbjct: 247 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 306

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           ||||| ||||| |||||  | ||||||||||||| |||||| || |||||||||||||||
Sbjct: 307 aagggtatcgtcgactccttgttccaggcgcccatgggcgatggnacccacgaggccgtc 366

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct: 367 ctcagctcntacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 426

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 427 ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 486

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 487 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggt 546

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 547 caggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatg 606

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 607 atgagtgccggagagct-ggagagcggcaacgccggagagccagccaagctcatcaggca 665

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||| ||||| ||||||||||||||
Sbjct: 666 gcggtaccgcgaggccgcagacatgatcaa 695



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>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  575 bits (290), Expect = e-161
 Identities = 296/298 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5623 ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 5682

                                                                        
Query: 61   tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5683 tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 5742

                                                                        
Query: 121  ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 180
            ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5743 ggcgcccacggggcacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 5802

                                                                        
Query: 181  gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5803 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 5862

                                                                      
Query: 241  catggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5863 catggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 5920



 Score =  410 bits (207), Expect = e-111
 Identities = 387/445 (86%), Gaps = 4/445 (0%)
 Strand = Plus / Plus

                                                                        
Query: 40   gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 99
            |||||||||||| || ||||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 2939 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 2998

                                                                        
Query: 100  catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 159
            |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 2999 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 3058

                                                                        
Query: 160  ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 219
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 3059 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 3118

                                                                        
Query: 220  cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 279
              | |||||||| || || ||||||||||||||  | ||||| ||| |||| ||||||||
Sbjct: 3119 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 3178

                                                                        
Query: 280  gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 339
            ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || ||
Sbjct: 3179 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 3238

                                                                        
Query: 340  aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 399
             || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3239 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 3298

                                                                        
Query: 400  tgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 459
             ||||| ||||| |||||| || |||   || ||||| |||||||| ||| ||||| |||
Sbjct: 3299 cgccggtgagct-ggagagcggcaac---ggcgagccggccaagctgatccggcagaggt 3354

                                     
Query: 460  accgtgaggctgcagacatgatcaa 484
            |||| ||||| || ||||| |||||
Sbjct: 3355 accgcgaggcggccgacattatcaa 3379



 Score =  182 bits (92), Expect = 7e-43
 Identities = 99/100 (99%), Gaps = 1/100 (1%)
 Strand = Plus / Plus

                                                                        
Query: 385  ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 6408 ccccatcatgatgagtgccggagagctgg-agagtgggaacgctggagagccagccaagc 6466

                                                    
Query: 445  tcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 6467 tcatcaggcagcggtaccgtgaggctgcagacatgatcaa 6506



 Score =  174 bits (88), Expect = 2e-40
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                        
Query: 297  agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6070 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 6129

                                        
Query: 357  agcttgtgttcgccaagatgggcatcaa 384
            ||||||||||||||||||||||||||||
Sbjct: 6130 agcttgtgttcgccaagatgggcatcaa 6157



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>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for
           ribulose-bisphosphate carboxylase activase large isoform
           precursor protein, complete cds, clone: 13YPR038
          Length = 1558

 Score =  535 bits (270), Expect = e-149
 Identities = 406/450 (90%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 204 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 263

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 264 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 323

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 324 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 383

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 384 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 443

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 444 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 503

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 504 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 563

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||||||||| |||||| || ||||| |||||||| || ||||| ||||||||
Sbjct: 564 atgagcgccggagagct-ggagagcggcaacgccggagagccggcgaagctgatcaggca 622

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||||||||| |||||||| |||||
Sbjct: 623 gcggtaccgtgaggcggcagacatcatcaa 652



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>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
           insert sequence
          Length = 1680

 Score =  535 bits (270), Expect = e-149
 Identities = 406/450 (90%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 241 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 300

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 301 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 360

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 361 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 420

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 421 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 480

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 481 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 540

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 541 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 600

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||||||||| |||||| || ||||| |||||||| || ||||| ||||||||
Sbjct: 601 atgagcgccggagagct-ggagagcggcaacgccggagagccggcgaagctgatcaggca 659

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||||||||| |||||||| |||||
Sbjct: 660 gcggtaccgtgaggcggcagacatcatcaa 689



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>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
           insert sequence
          Length = 1691

 Score =  535 bits (270), Expect = e-149
 Identities = 406/450 (90%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 300 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 359

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 360 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 419

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 420 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 479

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 480 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 539

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 540 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 599

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||||||||| |||||| || ||||| |||||||| || ||||| ||||||||
Sbjct: 600 atgagcgccggagagct-ggagagcggcaacgccggagagccggcgaagctgatcaggca 658

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||||||||| |||||||| |||||
Sbjct: 659 gcggtaccgtgaggcggcagacatcatcaa 688



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>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  535 bits (270), Expect = e-149
 Identities = 406/450 (90%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 24  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 83

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 84  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 143

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 144 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 203

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 204 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 263

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 264 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 323

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 324 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 383

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||||||||| |||||| || ||||| |||||||| || ||||| ||||||||
Sbjct: 384 atgagcgccggagagct-ggagagcggcaacgccggagagccggcgaagctgatcaggca 442

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||||||||| |||||||| |||||
Sbjct: 443 gcggtaccgtgaggcggcagacatcatcaa 472



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>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
           precursor, complete cds
          Length = 1706

 Score =  535 bits (270), Expect = e-149
 Identities = 406/450 (90%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 245 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 304

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 305 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 364

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 365 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 424

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 425 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 484

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 485 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 544

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 545 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 604

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||||||||| |||||| || ||||| |||||||| || ||||| ||||||||
Sbjct: 605 atgagcgccggagagct-ggagagcggcaacgccggagagccggcgaagctgatcaggca 663

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||||||||| |||||||| |||||
Sbjct: 664 gcggtaccgtgaggcggcagacatcatcaa 693



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>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
           precursor, complete cds
          Length = 1623

 Score =  535 bits (270), Expect = e-149
 Identities = 406/450 (90%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 239 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 298

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 299 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 358

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 359 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 418

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 419 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 478

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 479 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 538

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 539 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 598

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||||||||| |||||| || ||||| |||||||| || ||||| ||||||||
Sbjct: 599 atgagcgccggagagct-ggagagcggcaacgccggagagccggcgaagctgatcaggca 657

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||||||||| |||||||| |||||
Sbjct: 658 gcggtaccgtgaggcggcagacatcatcaa 687



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>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
           insert sequence
          Length = 1721

 Score =  527 bits (266), Expect = e-146
 Identities = 405/450 (90%), Gaps = 1/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 252 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 311

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 312 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 371

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 372 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 431

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 432 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 491

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||| |||||||||||| ||||||||| | |||||||||||||||||||||||
Sbjct: 492 ttcatgaccctccccaacatcaaggtcccactcaccctgggtatctggggaggcaagggt 551

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 552 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 611

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||||||||| |||||| || ||||| |||||||| || ||||| ||||||||
Sbjct: 612 atgagcgccggagagct-ggagagcggcaacgccggagagccggcgaagctgatcaggca 670

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||||||||| |||||||| |||||
Sbjct: 671 gcggtaccgtgaggcggcagacatcatcaa 700



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>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase (rca) mRNA, complete cds
          Length = 1675

 Score =  515 bits (260), Expect = e-143
 Identities = 404/450 (89%), Gaps = 4/450 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 212 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 271

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 272 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 331

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 332 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 391

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           ||||||||||||||||| ||| |||||||||||||||| || |||||  ||||||| |||
Sbjct: 392 ggaggcttctacatcgccccttctttcatggacaagctcgtcgtccacatctccaagaac 451

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 452 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 511

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 512 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 571

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||||||||| |||||| || |||   |||||||| |||||||| ||||||||
Sbjct: 572 atgagcgccggagagct-ggagagcggcaac---ggagagccggccaagctgatcaggca 627

                                         
Query: 455 gcggtaccgtgaggctgcagacatgatcaa 484
           ||||||||||||||| |||||||| |||||
Sbjct: 628 gcggtaccgtgaggcggcagacatcatcaa 657



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>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B
           (RcaB) mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 1525

 Score =  446 bits (225), Expect = e-122
 Identities = 391/445 (87%), Gaps = 1/445 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 99
           |||||||||||| || ||||| |||||||| ||||||||||||||||| || ||||| ||
Sbjct: 217 gtggaagggtctcgcttacgacatctccgatgaccagcaggacatcacgagggggaaagg 276

                                                                       
Query: 100 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 159
           |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 277 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctgag 336

                                                                       
Query: 160 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 219
           ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||
Sbjct: 337 ctcctacgagtacatcagccagggcctgcgcaagtacgacttcgacaacaccatggacgg 396

                                                                       
Query: 220 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 279
             | |||||||| || || ||||||||||||||  | ||||| ||| |||| ||||||||
Sbjct: 397 gctgtacatcgccccggcgttcatggacaagctcatcgtccacctcgccaagaacttcat 456

                                                                       
Query: 280 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 339
           ||| || |||||||||||| |||| |||||| |||||||||||||||||||||| || ||
Sbjct: 457 gacactccccaacatcaaggtccctctcatcctgggtatctggggaggcaagggacaggg 516

                                                                       
Query: 340 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 399
            || || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 517 caagtcgttccagtgcgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 576

                                                                       
Query: 400 tgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 459
            ||||||||||| |||||| || ||||| || ||||| |||||||| ||| ||||| |||
Sbjct: 577 cgccggagagct-ggagagcggcaacgccggcgagccggccaagctgatccggcagaggt 635

                                    
Query: 460 accgtgaggctgcagacatgatcaa 484
           |||| |||||||| ||||| |||||
Sbjct: 636 accgcgaggctgccgacattatcaa 660



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>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  410 bits (207), Expect = e-111
 Identities = 387/445 (86%), Gaps = 4/445 (0%)
 Strand = Plus / Plus

                                                                       
Query: 40  gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 99
           |||||||||||| || ||||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 370 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 429

                                                                       
Query: 100 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 159
           |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 430 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 489

                                                                       
Query: 160 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 219
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 490 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 549

                                                                       
Query: 220 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 279
             | |||||||| || || ||||||||||||||  | ||||| ||| |||| ||||||||
Sbjct: 550 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 609

                                                                       
Query: 280 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 339
           ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || ||
Sbjct: 610 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 669

                                                                       
Query: 340 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 399
            || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 670 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 729

                                                                       
Query: 400 tgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 459
            ||||| ||||| |||||| || |||   || ||||| |||||||| ||| ||||| |||
Sbjct: 730 cgccggtgagct-ggagagcggcaac---ggcgagccggccaagctgatccggcagaggt 785

                                    
Query: 460 accgtgaggctgcagacatgatcaa 484
           |||| ||||| || ||||| |||||
Sbjct: 786 accgcgaggcggccgacattatcaa 810



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>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
           insert sequence
          Length = 1682

 Score =  400 bits (202), Expect = e-108
 Identities = 296/326 (90%), Gaps = 1/326 (0%)
 Strand = Plus / Plus

                                                                       
Query: 159 gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 218
           |||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||||||
Sbjct: 327 gctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatgggag 386

                                                                       
Query: 219 gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttca 278
           ||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||||||
Sbjct: 387 gcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaacttca 446

                                                                       
Query: 279 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 338
           ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| |
Sbjct: 447 tgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtcagg 506

                                                                       
Query: 339 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 398
           ||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 507 gaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgatga 566

                                                                       
Query: 399 gtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcgg 458
           | ||||||||||| |||||| || ||||| |||||||| || ||||| ||||||||||||
Sbjct: 567 gcgccggagagct-ggagagcggcaacgccggagagccggcgaagctgatcaggcagcgg 625

                                     
Query: 459 taccgtgaggctgcagacatgatcaa 484
           ||||||||||| |||||||| |||||
Sbjct: 626 taccgtgaggcggcagacatcatcaa 651



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299

                                        
Query: 95  aagggcatcgtggactcgctcttccaggc 123
           |||||  |||| ||||| || ||||||||
Sbjct: 300 aagggtttcgtcgactcccttttccaggc 328



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>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  331 bits (167), Expect = 1e-87
 Identities = 369/435 (84%), Gaps = 1/435 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || 
Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||| |||| |||   |||||||||||||| | ||| |||||||||||||  ||||| 
Sbjct: 273 aagggcctcgtcgacaacctcttccaggcgcctatgggggacggcacccacgtcgccgtg 332

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||| ||| ||||||||||||    |   ||| ||||||||||||  |||
Sbjct: 333 ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           |  ||||||||||| ||    |  |||||||||||||| || ||||| |||||||| |||
Sbjct: 393 gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           |||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| || 
Sbjct: 453 ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatctggggaggcaaaggc 512

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| ||||| || ||||| || ||||||||||||||||||| ||||||||||
Sbjct: 513 cagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcacccccatcatg 572

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||| ||||| |||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 573 atgagcgccggcgagct-ggagagcggcaacgccggagagcccgccaagctcatcaggca 631

                          
Query: 455 gcggtaccgtgaggc 469
           ||| |||||||||||
Sbjct: 632 gcgctaccgtgaggc 646



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>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  319 bits (161), Expect = 5e-84
 Identities = 351/413 (84%), Gaps = 1/413 (0%)
 Strand = Plus / Plus

                                                                       
Query: 71  gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 130
           |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| |
Sbjct: 235 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 294

                                                                       
Query: 131 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 190
           |||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || || 
Sbjct: 295 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 354

                                                                       
Query: 191 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 250
             || | |||| ||||||||| ||   || || ||||||||||| || ||||||||||||
Sbjct: 355 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 414

                                                                       
Query: 251 cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 310
           ||||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| 
Sbjct: 415 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 474

                                                                       
Query: 311 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 370
           |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 475 ttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcc 534

                                                                       
Query: 371 aagatgggcatcaaccccatcatgatgagtgccggagagctgggagagtgggaacgctgg 430
           |||||||| |||||||||||||||||||| ||||| ||||| |||||| || ||||| ||
Sbjct: 535 aagatgggaatcaaccccatcatgatgagcgccggtgagct-ggagagcggcaacgccgg 593

                                                                
Query: 431 agagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 483
           |||||| || ||||| ||| ||||||||||||||||||| || ||||| ||||
Sbjct: 594 agagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatca 646



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>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  319 bits (161), Expect = 5e-84
 Identities = 351/413 (84%), Gaps = 1/413 (0%)
 Strand = Plus / Plus

                                                                       
Query: 71  gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 130
           |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| |
Sbjct: 98  gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 157

                                                                       
Query: 131 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 190
           |||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || || 
Sbjct: 158 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 217

                                                                       
Query: 191 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 250
             || | |||| ||||||||| ||   || || ||||||||||| || ||||||||||||
Sbjct: 218 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 277

                                                                       
Query: 251 cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 310
           ||||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| 
Sbjct: 278 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 337

                                                                       
Query: 311 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 370
           |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 338 ttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcc 397

                                                                       
Query: 371 aagatgggcatcaaccccatcatgatgagtgccggagagctgggagagtgggaacgctgg 430
           |||||||| |||||||||||||||||||| ||||| ||||| |||||| || ||||| ||
Sbjct: 398 aagatgggaatcaaccccatcatgatgagcgccggtgagct-ggagagcggcaacgccgg 456

                                                                
Query: 431 agagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 483
           |||||| || ||||| ||| ||||||||||||||||||| || ||||| ||||
Sbjct: 457 agagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatca 509



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>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  311 bits (157), Expect = 1e-81
 Identities = 350/413 (84%), Gaps = 1/413 (0%)
 Strand = Plus / Plus

                                                                       
Query: 71  gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 130
           |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| |
Sbjct: 128 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 187

                                                                       
Query: 131 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 190
           |||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || || 
Sbjct: 188 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 247

                                                                       
Query: 191 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 250
             || | |||| ||||||||| ||   || || ||||||||||| || ||||||||||||
Sbjct: 248 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 307

                                                                       
Query: 251 cttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatc 310
           ||||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| 
Sbjct: 308 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 367

                                                                       
Query: 311 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 370
           |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||||||||||
Sbjct: 368 ttgggtatctggggaggcaaaggtcaggggaaatccttccaatgtgaacttgtgttcgcc 427

                                                                       
Query: 371 aagatgggcatcaaccccatcatgatgagtgccggagagctgggagagtgggaacgctgg 430
           |||||||| |||||||||||||||||||| ||||| ||||| |||||| || ||||| ||
Sbjct: 428 aagatgggaatcaaccccatcatgatgagcgccggtgagct-ggagagcggcaacgccgg 486

                                                                
Query: 431 agagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 483
           |||||| || ||||| ||| ||||||||||||||||||| || ||||| ||||
Sbjct: 487 agagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatca 539



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>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  272 bits (137), Expect = 1e-69
 Identities = 359/435 (82%), Gaps = 1/435 (0%)
 Strand = Plus / Plus

                                                                       
Query: 35  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
           |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || 
Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272

                                                                       
Query: 95  aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
           |||||| |||| |||   |||||||||||||| |      ||||||||||||  ||||| 
Sbjct: 273 aagggcctcgtcgacaacctcttccaggcgcctatnnnnnacggcacccacgtcgccgtg 332

                                                                       
Query: 155 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 214
           |||||||||||||| ||| ||||||||||||    |   ||| ||||||||||||  |||
Sbjct: 333 ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392

                                                                       
Query: 215 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 274
           |  ||||||||||| ||    |  |||||||||||||| || ||||| |||||||| |||
Sbjct: 393 gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452

                                                                       
Query: 275 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 334
           |||||||||||||| ||||||||| | || |||||| ||||||||  ||||||||| || 
Sbjct: 453 ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatcgtgggaggcaaaggc 512

                                                                       
Query: 335 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 394
           || |||||||| ||||| || ||||| || |||||||||||||||||||     ||||||
Sbjct: 513 cagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcannnnnatcatg 572

                                                                       
Query: 395 atgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggca 454
           ||||| ||||| ||||| |||||| || ||||| |||||||| |||||||||||||||||
Sbjct: 573 atgagcgccggcgagct-ggagagcggcaacgccggagagcccgccaagctcatcaggca 631

                          
Query: 455 gcggtaccgtgaggc 469
           ||| |||||||||||
Sbjct: 632 gcgctaccgtgaggc 646



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>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  270 bits (136), Expect = 4e-69
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                          
Query: 193    gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 252
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 109435 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 109376

                                                                          
Query: 253    tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 312
               || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 109375 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 109316

                                                                          
Query: 313    gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 372
              |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 109315 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 109256

                          
Query: 373    gatgggcatcaa 384
              |||||| |||||
Sbjct: 109255 gatggggatcaa 109244



 Score =  176 bits (89), Expect = 4e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                          
Query: 35     gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
              |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 109706 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 109647

                                                                          
Query: 95     aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
              |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 109646 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 109587

                                           
Query: 155    ctcagctcctacgagtacgtcagccaggg 183
              |||||||||||||||||| ||||||||||
Sbjct: 109586 ctcagctcctacgagtacctcagccaggg 109558



 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                          
Query: 40     gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 99
              ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 113205 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 113146

                                                                 
Query: 100    catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 150
              | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 113145 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 113095



 Score =  111 bits (56), Expect = 2e-21
 Identities = 90/100 (90%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                          
Query: 385    ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
              ||||||||||||||| ||||||||||||| |||| || ||||| |||||||| || ||||
Sbjct: 109158 ccccatcatgatgagcgccggagagctgg-agagcggcaacgccggagagccggcgaagc 109100

                                                      
Query: 445    tcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
              | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 109099 tgatcaggcagcggtaccgtgaggcggcagacatcatcaa 109060



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                      
Query: 429    ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
              |||||||| || ||||| ||| ||||||||||||| ||||| || |||||||||||
Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaa 112723



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 347    ttccagtgtgagcttgtgttcgccaagatgggcatcaa 384
              ||||||||||| || || |||||||||||||| |||||
Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869



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>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  270 bits (136), Expect = 4e-69
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                         
Query: 193   gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 252
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 31312 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 31253

                                                                         
Query: 253   tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 312
              || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 31252 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 31193

                                                                         
Query: 313   gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 372
             |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 31192 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 31133

                         
Query: 373   gatgggcatcaa 384
             |||||| |||||
Sbjct: 31132 gatggggatcaa 31121



 Score =  176 bits (89), Expect = 4e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                         
Query: 35    gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
             |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 31583 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 31524

                                                                         
Query: 95    aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
             |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 31523 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 31464

                                          
Query: 155   ctcagctcctacgagtacgtcagccaggg 183
             |||||||||||||||||| ||||||||||
Sbjct: 31463 ctcagctcctacgagtacctcagccaggg 31435



 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                         
Query: 40    gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 99
             ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 35082 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 35023

                                                                
Query: 100   catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 150
             | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 35022 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 34972



 Score =  111 bits (56), Expect = 2e-21
 Identities = 90/100 (90%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                         
Query: 385   ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
             ||||||||||||||| ||||||||||||| |||| || ||||| |||||||| || ||||
Sbjct: 31035 ccccatcatgatgagcgccggagagctgg-agagcggcaacgccggagagccggcgaagc 30977

                                                     
Query: 445   tcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
             | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 30976 tgatcaggcagcggtaccgtgaggcggcagacatcatcaa 30937



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 429   ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
             |||||||| || ||||| ||| ||||||||||||| ||||| || |||||||||||
Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaa 34600



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 347   ttccagtgtgagcttgtgttcgccaagatgggcatcaa 384
             ||||||||||| || || |||||||||||||| |||||
Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  270 bits (136), Expect = 4e-69
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                            
Query: 193      gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 252
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28304574 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28304515

                                                                            
Query: 253      tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 312
                 || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 28304514 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28304455

                                                                            
Query: 313      gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 372
                |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 28304454 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28304395

                            
Query: 373      gatgggcatcaa 384
                |||||| |||||
Sbjct: 28304394 gatggggatcaa 28304383



 Score =  176 bits (89), Expect = 4e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                            
Query: 35       gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
                |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 28304845 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 28304786

                                                                            
Query: 95       aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
                |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 28304785 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 28304726

                                             
Query: 155      ctcagctcctacgagtacgtcagccaggg 183
                |||||||||||||||||| ||||||||||
Sbjct: 28304725 ctcagctcctacgagtacctcagccaggg 28304697



 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                            
Query: 40       gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 99
                ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 28308344 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 28308285

                                                                   
Query: 100      catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 150
                | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 28308284 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28308234



 Score =  111 bits (56), Expect = 2e-21
 Identities = 90/100 (90%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                            
Query: 385      ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
                ||||||||||||||| ||||||||||||| |||| || ||||| |||||||| || ||||
Sbjct: 28304297 ccccatcatgatgagcgccggagagctgg-agagcggcaacgccggagagccggcgaagc 28304239

                                                        
Query: 445      tcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
                | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 28304238 tgatcaggcagcggtaccgtgaggcggcagacatcatcaa 28304199



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 429      ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
                |||||||| || ||||| ||| ||||||||||||| ||||| || |||||||||||
Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaa 28307862



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 347      ttccagtgtgagcttgtgttcgccaagatgggcatcaa 384
                ||||||||||| || || |||||||||||||| |||||
Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008



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>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 1 mRNA, complete cds
          Length = 1559

 Score =  270 bits (136), Expect = 4e-69
 Identities = 368/444 (82%), Gaps = 1/444 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggc 100
           |||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| || 
Sbjct: 280 tggaagggtcttgcttatgatatctccgatgaccaacaagacattaccagagggaaaggt 339

                                                                       
Query: 101 atcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagc 160
           || || |||||  | ||||| || |||| |  ||| || || ||| | || ||| | |||
Sbjct: 340 atggtcgactcattgttccaagctcccatgaacgatggtactcactatgctgtcatgagc 399

                                                                       
Query: 161 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 220
           ||||| |||||| | ||||| ||||| || |  |||||||| ||||||| |||||  || 
Sbjct: 400 tcctatgagtacattagccaaggccttcgcacatacgacttggacaacaacatggatgga 459

                                                                       
Query: 221 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 280
           |||||||| || || ||||||||||||||||||||||| ||  || |||| |||| ||||
Sbjct: 460 ttctacattgccccagctttcatggacaagcttgttgttcacatcaccaagaactacatg 519

                                                                       
Query: 281 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 340
           ||||| || ||||| ||| | || || ||||||||||| ||||||||||| |||||||||
Sbjct: 520 acccttcctaacattaaggttcctcttatcttgggtatttggggaggcaaaggtcaagga 579

                                                                       
Query: 341 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 400
           ||||| ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 580 aaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccattatgatgagt 639

                                                                       
Query: 401 gccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 460
           ||||||||  | ||| ||||||||||| ||||| ||||||||| | ||||||||  ||||
Sbjct: 640 gccggaga-attggaaagtgggaacgccggagaaccagccaagttgatcaggcaaaggta 698

                                   
Query: 461 ccgtgaggctgcagacatgatcaa 484
           ||||||||| || ||||| |||||
Sbjct: 699 ccgtgaggccgccgacattatcaa 722



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  270 bits (136), Expect = 4e-69
 Identities = 178/192 (92%)
 Strand = Plus / Minus

                                                                            
Query: 193      gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 252
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28287023 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28286964

                                                                            
Query: 253      tgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatctt 312
                 || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 28286963 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28286904

                                                                            
Query: 313      gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 372
                |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 28286903 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28286844

                            
Query: 373      gatgggcatcaa 384
                |||||| |||||
Sbjct: 28286843 gatggggatcaa 28286832



 Score =  176 bits (89), Expect = 4e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                            
Query: 35       gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 94
                |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 28287294 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 28287235

                                                                            
Query: 95       aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 154
                |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 28287234 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 28287175

                                             
Query: 155      ctcagctcctacgagtacgtcagccaggg 183
                |||||||||||||||||| ||||||||||
Sbjct: 28287174 ctcagctcctacgagtacctcagccaggg 28287146



 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                            
Query: 40       gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 99
                ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 28290793 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 28290734

                                                                   
Query: 100      catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 150
                | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 28290733 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28290683



 Score =  111 bits (56), Expect = 2e-21
 Identities = 90/100 (90%), Gaps = 1/100 (1%)
 Strand = Plus / Minus

                                                                            
Query: 385      ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
                ||||||||||||||| ||||||||||||| |||| || ||||| |||||||| || ||||
Sbjct: 28286746 ccccatcatgatgagcgccggagagctgg-agagcggcaacgccggagagccggcgaagc 28286688

                                                        
Query: 445      tcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
                | ||||||||||||||||||||||| |||||||| |||||
Sbjct: 28286687 tgatcaggcagcggtaccgtgaggcggcagacatcatcaa 28286648



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 429      ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
                |||||||| || ||||| ||| ||||||||||||| ||||| || |||||||||||
Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaa 28290311



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 347      ttccagtgtgagcttgtgttcgccaagatgggcatcaa 384
                ||||||||||| || || |||||||||||||| |||||
Sbjct: 28290494 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457



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>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  246 bits (124), Expect = 6e-62
 Identities = 227/260 (87%), Gaps = 1/260 (0%)
 Strand = Plus / Plus

                                                                       
Query: 224 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 283
           ||||||||||| || ||||||||||||||||| || ||  || |||| |||||||||| |
Sbjct: 87  tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 146

                                                                       
Query: 284 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 343
            |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || |||
Sbjct: 147 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaa 206

                                                                       
Query: 344 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 403
           || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 207 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 266

                                                                       
Query: 404 ggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccg 463
           || ||||| |||||| || ||||| |||||||| || ||||| ||| |||||||||||||
Sbjct: 267 ggtgagct-ggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccg 325

                               
Query: 464 tgaggctgcagacatgatca 483
           |||||| || ||||| ||||
Sbjct: 326 tgaggccgccgacatcatca 345



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>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  244 bits (123), Expect = 2e-61
 Identities = 205/231 (88%), Gaps = 1/231 (0%)
 Strand = Plus / Plus

                                                                       
Query: 239 ttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 298
           |||||||||||||| || ||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 22  ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 81

                                                                       
Query: 299 atcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgag 358
            | || |||||| ||||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 82  gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 141

                                                                       
Query: 359 cttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctgggagag 418
           || || ||||||||||||||||||| ||||||||||||||| ||||| ||||| ||||||
Sbjct: 142 ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagct-ggagag 200

                                                              
Query: 419 tgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 469
            || ||||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 201 cggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggc 251



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>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  242 bits (122), Expect = 9e-61
 Identities = 243/282 (86%), Gaps = 1/282 (0%)
 Strand = Plus / Plus

                                                                       
Query: 203 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 262
           ||||||| |||||  || |||||||| |||||||| |||||||||||||||||||| || 
Sbjct: 256 gacaacaacatggatggtttctacattgctcctgcattcatggacaagcttgttgttcac 315

                                                                       
Query: 263 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 322
            || |||| ||||||||| |||| || ||||| ||| | || || ||||||||||| |||
Sbjct: 316 atcaccaagaacttcatgtccctccctaacattaaggttcctctaatcttgggtatttgg 375

                                                                       
Query: 323 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 382
           |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 376 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 435

                                                                       
Query: 383 aaccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaa 442
           |||||||||||||||||||||||||| || ||| ||||| ||||| || || ||||||||
Sbjct: 436 aaccccatcatgatgagtgccggagaact-ggaaagtggaaacgccggtgaaccagccaa 494

                                                     
Query: 443 gctcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
           | | ||||||||  |||||||||| ||||| ||||| |||||
Sbjct: 495 gttgatcaggcaaaggtaccgtgaagctgccgacataatcaa 536



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>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
           transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 676 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 736 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 794

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 795 tcagaggtaccgtgaggcagctgacttgatcaa 827



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>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
           transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 676 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 736 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 794

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 795 tcagaggtaccgtgaggcagctgacttgatcaa 827



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>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
           transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 705 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 765 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 823

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 824 tcagaggtaccgtgaggcagctgacttgatcaa 856



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>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
           (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 587 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 647 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 705

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 706 tcagaggtaccgtgaggcagctgacttgatcaa 738



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>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 322 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 381

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 382 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 441

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 442 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 501

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 502 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 561

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 562 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 620

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 621 tcagaggtaccgtgaggcagctgacttgatcaa 653



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>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 590 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 650 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 708

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 709 tcagaggtaccgtgaggcagctgacttgatcaa 741



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>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 399 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 458

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 459 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 518

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 519 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 578

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 579 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 638

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 639 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 697

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 698 tcagaggtaccgtgaggcagctgacttgatcaa 730



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>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 587 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 647 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 705

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 706 tcagaggtaccgtgaggcagctgacttgatcaa 738



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>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete
           cds
          Length = 1674

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 590 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 650 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 708

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 709 tcagaggtaccgtgaggcagctgacttgatcaa 741



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>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  232 bits (117), Expect = 9e-58
 Identities = 280/333 (84%), Gaps = 1/333 (0%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 705 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764

                                                                       
Query: 392 atgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcatcag 451
           ||||||||||| ||||||||  |||||||| ||||| ||||| || || ||||| ||| |
Sbjct: 765 atgatgagtgctggagagct-tgagagtggaaacgcaggagaacccgcaaagcttatccg 823

                                            
Query: 452 gcagcggtaccgtgaggctgcagacatgatcaa 484
            ||| ||||||||||||| || ||| |||||||
Sbjct: 824 tcagaggtaccgtgaggcagctgacttgatcaa 856



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>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  226 bits (114), Expect = 5e-56
 Identities = 241/282 (85%), Gaps = 1/282 (0%)
 Strand = Plus / Plus

                                                                       
Query: 203 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 262
           ||||||| |||||  || ||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 257 gacaacaacatggatggtttctacatcgctcctgcattcatggacaagcttgttgttcac 316

                                                                       
Query: 263 ctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 322
            ||  ||| ||||||||| |||| || ||||| ||| | || || ||| ||||||| |||
Sbjct: 317 atcagcaagaacttcatgtccctccctaacattaaggttcctctaatcctgggtatttgg 376

                                                                       
Query: 323 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 382
           |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 377 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 436

                                                                       
Query: 383 aaccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaa 442
           |||||||||||||||||||||||||| || ||| ||||| ||||| || || ||||||||
Sbjct: 437 aaccccatcatgatgagtgccggagaact-ggaaagtggaaacgccggtgaaccagccaa 495

                                                     
Query: 443 gctcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
           | | ||||||||  |||||||||| || || ||||| |||||
Sbjct: 496 gttgatcaggcaaaggtaccgtgaagccgccgacataatcaa 537



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>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  224 bits (113), Expect = 2e-55
 Identities = 249/293 (84%), Gaps = 1/293 (0%)
 Strand = Plus / Plus

                                                                       
Query: 192 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 251
           ||||| |||| ||||||| |||||  || |||||||| || || || |||||||||||||
Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490

                                                                       
Query: 252 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 311
           |||| |||||  || |||| |||||| |||  || || ||||||||||| || || ||||
Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550

                                                                       
Query: 312 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 371
           ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610

                                                                       
Query: 372 agatgggcatcaaccccatcatgatgagtgccggagagctgggagagtgggaacgctgga 431
           ||||||| ||||||||||||||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagct-ggaaagtggaaatgcagga 669

                                                                
Query: 432 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
           || || |||||||| ||||||||  |||||||||| ||||| ||||| |||||
Sbjct: 670 gaacctgccaagctgatcaggcaaaggtaccgtgaagctgctgacattatcaa 722



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>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  222 bits (112), Expect = 8e-55
 Identities = 227/264 (85%), Gaps = 1/264 (0%)
 Strand = Plus / Plus

                                                                       
Query: 221 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 280
           |||||||| ||||| |||||||||||||||||||| || ||  || ||||||||||||||
Sbjct: 476 ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 535

                                                                       
Query: 281 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 340
           || || |||||||| ||| | || ||||| ||||||||||||||||| || |||||||| 
Sbjct: 536 actctccccaacataaaggttcctctcattttgggtatctggggaggtaaaggtcaaggt 595

                                                                       
Query: 341 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 400
           ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 596 aaatctttccagtgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 655

                                                                       
Query: 401 gccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 460
           ||||||||  | |||||| || ||||| |||||||| || ||| | |||||||| |||| 
Sbjct: 656 gccggaga-attggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtg 714

                                   
Query: 461 ccgtgaggctgcagacatgatcaa 484
            |||||||| || ||||| |||||
Sbjct: 715 tcgtgaggcggccgacatcatcaa 738



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>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  222 bits (112), Expect = 8e-55
 Identities = 224/260 (86%), Gaps = 1/260 (0%)
 Strand = Plus / Plus

                                                                       
Query: 222 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatga 281
           ||||||| || ||||| || ||||||||||||||||| ||  || |||| |||||| |||
Sbjct: 630 tctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttcttga 689

                                                                       
Query: 282 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 341
            | |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |
Sbjct: 690 acttgcccaacatcaagataccactcatcttgggtgtttggggaggcaagggtcaaggta 749

                                                                       
Query: 342 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 401
           |||| ||||| ||||||||||||||||||||| | || || |||||||||||||||||||
Sbjct: 750 aatccttccaatgtgagcttgtgttcgccaagttaggaataaaccccatcatgatgagtg 809

                                                                       
Query: 402 ccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 461
           |||||||  | ||| ||||| || || ||||||||||| ||| | ||||||||  |||||
Sbjct: 810 ccggaga-attggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtac 868

                               
Query: 462 cgtgaggctgcagacatgat 481
           |||||||| |||||| ||||
Sbjct: 869 cgtgaggcagcagacttgat 888



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>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  212 bits (107), Expect = 8e-52
 Identities = 222/259 (85%), Gaps = 1/259 (0%)
 Strand = Plus / Plus

                                                                       
Query: 220 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 279
           ||||||||| || ||| |||||||||||||| ||||||| ||  || |||| |||| | |
Sbjct: 514 cttctacattgccccttctttcatggacaagattgttgttcacatcaccaagaactactt 573

                                                                       
Query: 280 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 339
           || | |||| ||||||||| | || || ||||||||||| ||||||||||| ||||||||
Sbjct: 574 gaacttgcctaacatcaaggttcccctgatcttgggtatttggggaggcaaaggtcaagg 633

                                                                       
Query: 340 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 399
            ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 634 taaatccttccaatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatgag 693

                                                                       
Query: 400 tgccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 459
           ||| |||||  | ||| ||||| ||||| ||||||||||| ||| | ||||||||  |||
Sbjct: 694 tgcgggaga-attggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggt 752

                              
Query: 460 accgtgaggctgcagacat 478
           |||||||||| ||||||||
Sbjct: 753 accgtgaggcagcagacat 771



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>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  212 bits (107), Expect = 8e-52
 Identities = 219/255 (85%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 221 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 280
           |||||||| |||||||||||  |||||||||||||||| ||  || |||| |||||||||
Sbjct: 469 ttctacattgctcctgcttttctggacaagcttgttgttcacatcaccaagaacttcatg 528

                                                                       
Query: 281 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 340
           ||| |||||||||||||| | || |||||  | |||||||||||||||||||| ||||||
Sbjct: 529 accttgcccaacatcaaggttcctctcattcttggtatctggggaggcaagggacaagga 588

                                                                       
Query: 341 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 400
           || || ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 589 aagtctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 648

                                                                       
Query: 401 gccggagagctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 460
           || |||||| | ||| ||||| || || ||||||||||| ||  | ||||||||| | ||
Sbjct: 649 gctggagag-ttggaaagtggaaatgccggagagccagcaaaattgatcaggcagagata 707

                          
Query: 461 ccgtgaggctgcaga 475
           |||||| ||||||||
Sbjct: 708 ccgtgaagctgcaga 722



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 41  tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 99
           ||||||||||| || ||||||||||| || ||||| || |||||||| || ||||||||
Sbjct: 295 tggaagggtctggcctacgatatctctgatgaccaacaagacatcacaagggggaaggg 353



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>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  212 bits (107), Expect = 8e-52
 Identities = 240/283 (84%), Gaps = 1/283 (0%)
 Strand = Plus / Plus

                                                                       
Query: 161 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 220
           |||||||| ||||||||||| || || ||  ||||| |||| |||||||   |||  || 
Sbjct: 396 tcctacgaatacgtcagccaaggtcttcgccagtacaacttggacaacaagttggacgga 455

                                                                       
Query: 221 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 280
           |||||||||||||||||||||||||||||||||||||| ||  || |||| |||||| ||
Sbjct: 456 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttg 515

                                                                       
Query: 281 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 340
           |   |||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 516 aaattgcccaacatcaaggttccacttatcttgggtatctggggaggcaaaggtcaaggc 575

                                                                       
Query: 341 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 400
           ||||||||||||||||| ||||| |||   |||||||| ||||||||||| |||||||||
Sbjct: 576 aaatcattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgagt 635

                                                      
Query: 401 gccggagagctgggagagtgggaacgctggagagccagccaag 443
           || |||||  | ||| ||||| || || |||||||||||||||
Sbjct: 636 gctggaga-attggaaagtggaaatgcaggagagccagccaag 677



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>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  204 bits (103), Expect = 2e-49
 Identities = 224/263 (85%), Gaps = 1/263 (0%)
 Strand = Plus / Plus

                                                                       
Query: 192 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 251
           ||||| |||| ||||||| |||||  || |||||||| || || || |||||||||||||
Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490

                                                                       
Query: 252 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 311
           |||| |||||  || |||| |||||| |||  || || ||||||||||| || || ||||
Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550

                                                                       
Query: 312 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 371
           ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610

                                                                       
Query: 372 agatgggcatcaaccccatcatgatgagtgccggagagctgggagagtgggaacgctgga 431
           ||||||| ||||||||||||||||||||||| |||||||| ||| ||||| || || |||
Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagct-ggaaagtggaaatgcagga 669

                                  
Query: 432 gagccagccaagctcatcaggca 454
           ||||| || ||||| ||||||||
Sbjct: 670 gagcccgcaaagctgatcaggca 692



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>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  190 bits (96), Expect = 3e-45
 Identities = 211/248 (85%), Gaps = 1/248 (0%)
 Strand = Plus / Plus

                                                                       
Query: 192 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 251
           ||||| |||| ||||||| || ||  || |||||||| ||||| |||||  |||||||||
Sbjct: 436 agtacaactttgacaacatcaaggatggtttctacattgctccagcttttttggacaagc 495

                                                                       
Query: 252 ttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagatcccactcatct 311
           ||||||| ||  || |||| |||||||||||| |||||||||||||| | || |||||  
Sbjct: 496 ttgttgttcacatcgccaagaacttcatgaccttgcccaacatcaaggttcctctcattc 555

                                                                       
Query: 312 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 371
           | ||| |||||||||||||||| ||||||||||| ||||| ||||||||||| || ||||
Sbjct: 556 ttggtgtctggggaggcaagggacaaggaaaatctttccaatgtgagcttgtctttgcca 615

                                                                       
Query: 372 agatgggcatcaaccccatcatgatgagtgccggagagctgggagagtgggaacgctgga 431
           ||||||| ||||||||||||||||||||||| |||||| | ||| ||||| || || |||
Sbjct: 616 agatgggaatcaaccccatcatgatgagtgctggagag-ttggaaagtggaaatgccgga 674

                   
Query: 432 gagccagc 439
           ||||||||
Sbjct: 675 gagccagc 682



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>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
           (pJQ4)
          Length = 1655

 Score =  182 bits (92), Expect = 7e-43
 Identities = 164/188 (87%)
 Strand = Plus / Plus

                                                                       
Query: 221 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 280
           ||||||||||||||| |||||||||||||||||||||| ||  || |||| |||||| ||
Sbjct: 426 ttctacatcgctccttctttcatggacaagcttgttgttcacatcaccaagaacttcttg 485

                                                                       
Query: 281 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 340
           |   |||||||||||||| | |||||||| |||||| ||||||||||||| |||||||| 
Sbjct: 486 aaattgcccaacatcaaggttccactcattttgggtgtctggggaggcaaaggtcaaggt 545

                                                                       
Query: 341 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 400
           ||||| ||||||||||||||||| |||   |||||||| |||||||| || |||||||||
Sbjct: 546 aaatctttccagtgtgagcttgtcttcagaaagatgggaatcaaccctattatgatgagt 605

                   
Query: 401 gccggaga 408
           ||||||||
Sbjct: 606 gccggaga 613



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>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  180 bits (91), Expect = 3e-42
 Identities = 238/283 (84%), Gaps = 3/283 (1%)
 Strand = Plus / Plus

                                                                       
Query: 152 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 211
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 391 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 450

                                                                       
Query: 212 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaa 271
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 451 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 510

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatct-ggggaggcaa 330
           |||||| |||| ||||| ||||||||| | ||||| || |||||  ||| ||||||||||
Sbjct: 511 aacttcttgactctgcctaacatcaaggttccacttattttgggc-tctcggggaggcaa 569

                                                                       
Query: 331 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 390
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| ||
Sbjct: 570 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 629

                                                      
Query: 391 catgatgagtgccggagagctgggagagtgggaacgctggaga 433
           |||||||||||| ||||||||  |||||||| ||||| |||||
Sbjct: 630 catgatgagtgctggagagct-tgagagtggaaacgcaggaga 671



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>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  180 bits (91), Expect = 3e-42
 Identities = 166/191 (86%)
 Strand = Plus / Plus

                                                                       
Query: 218 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 277
           ||||||||||| || ||||||||||||||||| |||||||| ||  || |||| ||||||
Sbjct: 434 ggcttctacattgcccctgctttcatggacaaacttgttgttcacatcaccaagaacttc 493

                                                                       
Query: 278 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 337
            ||||  |||||||||||||| | ||||||||||||||| | ||||||||||| ||||||
Sbjct: 494 ttgacattgcccaacatcaaggttccactcatcttgggtgtatggggaggcaaaggtcaa 553

                                                                       
Query: 338 ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 397
           || ||||||||||| ||||||||||| |||   |||||||| ||||||||||| ||||||
Sbjct: 554 ggtaaatcattccaatgtgagcttgtcttcagaaagatgggaatcaaccccattatgatg 613

                      
Query: 398 agtgccggaga 408
           ||||| |||||
Sbjct: 614 agtgctggaga 624



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>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase mRNA
          Length = 1853

 Score =  163 bits (82), Expect = 7e-37
 Identities = 212/254 (83%), Gaps = 1/254 (0%)
 Strand = Plus / Plus

                                                                       
Query: 230 gctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgaccctgccc 289
           ||||| ||||| ||||||||||||||||| ||  || |||| |||||||||||||| || 
Sbjct: 485 gctcccgcttttatggacaagcttgttgttcacatcaccaagaacttcatgacccttcct 544

                                                                       
Query: 290 aacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattc 349
           ||||| ||| | || |||||||||||||| ||||||||||| ||||| || || || |||
Sbjct: 545 aacatgaaggttcctctcatcttgggtatttggggaggcaaaggtcagggcaagtctttc 604

                                                                       
Query: 350 cagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagag 409
           ||||| |||||||| || ||||||||| | |||| ||| |||||||||||||||||||| 
Sbjct: 605 cagtgcgagcttgtctttgccaagatgagaatcagccctatcatgatgagtgccggaga- 663

                                                                       
Query: 410 ctgggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 469
            | ||| ||||| ||||| ||||| || || ||||| ||||||||  |||||||||| ||
Sbjct: 664 attggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagc 723

                         
Query: 470 tgcagacatgatca 483
            || ||||| ||||
Sbjct: 724 agccgacattatca 737



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 64  ctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggc 123
           |||||||||||| || |||||||| ||||| ||||| |  |||||||| |||||||||||
Sbjct: 319 ctccgacgaccaacaagacatcacaagaggaaagggtaaggtggactccctcttccaggc 378



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>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  159 bits (80), Expect = 1e-35
 Identities = 161/188 (85%)
 Strand = Plus / Plus

                                                                       
Query: 221 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 280
           |||||||||||||||||||||||||||||||||||||| ||  || |||| |||||| | 
Sbjct: 473 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttctta 532

                                                                       
Query: 281 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 340
           ||  |||||||||||||| | ||||| || |||||| | |||||||| || |||||||| 
Sbjct: 533 acgttgcccaacatcaaggttccacttattttgggtgtttggggaggaaaaggtcaaggt 592

                                                                       
Query: 341 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 400
           ||||||||||| ||||||||||| |||   |||||||| |||||||| || |||||||||
Sbjct: 593 aaatcattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgagt 652

                   
Query: 401 gccggaga 408
           || |||||
Sbjct: 653 gctggaga 660



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>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score =  149 bits (75), Expect = 1e-32
 Identities = 156/183 (85%)
 Strand = Plus / Plus

                                                                       
Query: 223 ctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgac 282
           |||||| ||||||||||| ||||||||||||||||| ||  |||| ||||||||||||| 
Sbjct: 156 ctacattgctcctgcttttatggacaagcttgttgttcacatctcgaaaaacttcatgaa 215

                                                                       
Query: 283 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaa 342
           | |||| ||||||||| | || |||||  | ||||| |||||||||||||||||||||||
Sbjct: 216 cttgcctaacatcaaggttcctctcattcttggtatttggggaggcaagggtcaaggaaa 275

                                                                       
Query: 343 atcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgc 402
            || ||||| ||||||||||| || || ||  |||| |||||||| || |||||||||||
Sbjct: 276 gtccttccaatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtgc 335

              
Query: 403 cgg 405
           |||
Sbjct: 336 cgg 338



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>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  105 bits (53), Expect = 1e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                        
Query: 297  agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 356
            |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| ||||
Sbjct: 2238 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 2297

                             
Query: 357  agcttgtgttcgccaag 373
            |||||||||||||||||
Sbjct: 2298 agcttgtgttcgccaag 2314



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 83/97 (85%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                        
Query: 385  ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
            ||||||||||||||||||||||||  ||| | ||||| || || ||||||||||| ||| 
Sbjct: 2421 ccccatcatgatgagtgccggagaattggaa-agtggaaatgcaggagagccagctaagt 2479

                                                 
Query: 445  tcatcaggcagcggtaccgtgaggctgcagacatgat 481
            | ||||||||  ||||||||||||| |||||| ||||
Sbjct: 2480 tgatcaggcaaaggtaccgtgaggcagcagacttgat 2516



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Plus

                                                                        
Query: 220  cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcat 279
            ||||||||| || ||||| || ||||||||||||||||| ||  || |||| |||||| |
Sbjct: 2067 cttctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttctt 2126

                               
Query: 280  gaccctgcccaacatcaag 298
            || | ||||||||||||||
Sbjct: 2127 gaacttgcccaacatcaag 2145



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>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 122/141 (86%), Gaps = 4/141 (2%)
 Strand = Plus / Plus

                                                                       
Query: 329 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccc 388
           ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||  || 
Sbjct: 1   aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatcactcct 60

                                                                       
Query: 389 atcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcat 448
           ||||||||||||||||||||  |  || ||| |||||||| |||||||||| ||||||||
Sbjct: 61  atcatgatgagtgccggaga-attagaaagt-ggaacgct-gagagccagctaagctcat 117

                                
Query: 449 caggcagcggtaccgtgaggc 469
           ||| |||| ||||||||||||
Sbjct: 118 cagacagc-gtaccgtgaggc 137



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>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 305 ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 364
           ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| 
Sbjct: 186 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 245

                               
Query: 365 ttcgccaagatgggcatcaa 384
           || ||||||||||| |||||
Sbjct: 246 tttgccaagatgggaatcaa 265



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 221 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatg 280
           |||||||| ||||| |||||||||||||||||||| || ||  || ||||||||||||||
Sbjct: 6   ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 65

             
Query: 281 ac 282
           ||
Sbjct: 66  ac 67



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 84/100 (84%), Gaps = 1/100 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||||||||||||||||||||  | |||||| || ||||| |||||||| || ||| 
Sbjct: 467 ccccatcatgatgagtgccggaga-attggagagcggcaacgcaggagagcccgcgaagt 525

                                                   
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatcaa 484
           | |||||||| ||||  |||||||| || ||||| |||||
Sbjct: 526 tgatcaggcaacggtgtcgtgaggcggccgacatcatcaa 565



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>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                       
Query: 330 agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 389
           |||| ||||||||||| |||||   ||||||||| || ||||||||||| ||||||||||
Sbjct: 7   agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66

                                 
Query: 390 tcatgatgagtgccggagagct 411
           ||||||||||||| ||||||||
Sbjct: 67  tcatgatgagtgctggagagct 88



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>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 302   ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 361
             ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 14733 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 14674

                                    
Query: 362   gtgttcgccaagatgggcatcaa 384
             ||  | ||||||||||| |||||
Sbjct: 14673 gtcatggccaagatgggtatcaa 14651



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 224   tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 283
             ||||| ||||||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 14910 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 14851

                            
Query: 284   ctgcccaacatcaag 298
             ||||| |||||||||
Sbjct: 14850 ctgcctaacatcaag 14836



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 81/96 (84%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 389   atcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcat 448
             |||||||||||||| |||||||| | ||||||| ||||| ||||| || || ||||| ||
Sbjct: 14555 atcatgatgagtgctggagagcttg-agagtggaaacgcaggagaacccgcaaagcttat 14497

                                                 
Query: 449   caggcagcggtaccgtgaggctgcagacatgatcaa 484
             | | ||| ||||||||||||| || ||| |||||||
Sbjct: 14496 ccgtcagaggtaccgtgaggcagctgacttgatcaa 14461



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>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                       
Query: 272 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 331
           |||||| ||||||| || ||||| ||| | || |||||  ||||| | |||||||| || 
Sbjct: 522 aacttcttgaccctcccgaacattaaggttcctctcattctgggtgtttggggaggtaaa 581

                                                                       
Query: 332 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 391
           ||||||||||| || ||||||||||| ||||| || || |||||||| |||||||| || 
Sbjct: 582 ggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatgggaatcaaccctatt 641

                      
Query: 392 atgatgagtgc 402
           |||||||||||
Sbjct: 642 atgatgagtgc 652



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>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                        
Query: 302  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 361
            ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 2550 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 2609

                                   
Query: 362  gtgttcgccaagatgggcatcaa 384
            ||  | ||||||||||| |||||
Sbjct: 2610 gtcatggccaagatgggtatcaa 2632



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                        
Query: 224  tacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatgacc 283
            ||||| ||||||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 2373 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 2432

                           
Query: 284  ctgcccaacatcaag 298
            ||||| |||||||||
Sbjct: 2433 ctgcctaacatcaag 2447



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 81/96 (84%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                        
Query: 389  atcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagctcat 448
            |||||||||||||| |||||||| | ||||||| ||||| ||||| || || ||||| ||
Sbjct: 2728 atcatgatgagtgctggagagcttg-agagtggaaacgcaggagaacccgcaaagcttat 2786

                                                
Query: 449  caggcagcggtaccgtgaggctgcagacatgatcaa 484
            | | ||| ||||||||||||| || ||| |||||||
Sbjct: 2787 ccgtcagaggtaccgtgaggcagctgacttgatcaa 2822



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>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 296  aagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgt 355
            ||||| || ||||| ||||| || ||||||||||| ||||||||||| ||||| || |||
Sbjct: 7541 aagattcctctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgt 7482

                                        
Query: 356  gagcttgtgttcgccaagatgggcatca 383
            |||||||| || ||||||||||| ||||
Sbjct: 7481 gagcttgtatttgccaagatgggaatca 7454



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>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                          
Query: 314    ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 373
              |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 104933 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 104874

                         
Query: 374    atgggcatcaa 384
              |||||||||||
Sbjct: 104873 atgggcatcaa 104863



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>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 314   ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 373
             |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 83958 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 83899

                        
Query: 374   atgggcatcaa 384
             |||||||||||
Sbjct: 83898 atgggcatcaa 83888



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 203   gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgt 258
             |||||||||||||  || || ||||| || |||||||| |||||||||||||||||
Sbjct: 84295 gacaacaccatggatggtttttacattgcacctgcttttatggacaagcttgttgt 84240



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>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 218  ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttc 277
            |||||||||||| ||||||||||| |||| ||| |     ||||| |  |||| ||||||
Sbjct: 1128 ggcttctacatctctcctgctttcctggataagatgaccatccatgttgccaagaacttc 1187

                                                                        
Query: 278  atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 337
            |||  ||||||||| |||||| | || |||||| ||||||||||||| |||||||| || 
Sbjct: 1188 atggacctgcccaagatcaaggttcccctcatcctgggtatctggggtggcaagggccag 1247

                 
Query: 338  ggaaa 342
            |||||
Sbjct: 1248 ggaaa 1252



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                        
Query: 375  tgggcatcaaccccatcatgatgagtgccggagagctgggagagtgggaacgctggagag 434
            ||||||||| ||||||| | |||  |||||| ||||||| ||  ||| ||||| || |||
Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctgg-agtctggtaacgccggtgag 1501

                                                
Query: 435  ccagccaagctcatcaggcagcggtaccgtgaggct 470
            || |||||||||||| | ||||| ||||| ||||||
Sbjct: 1502 cccgccaagctcatccgccagcgctaccgcgaggct 1537



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>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 267 ccaaaaacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggag 326
           |||| |||||||||  ||||||||| |||||| | || |||||  ||||||||||||| |
Sbjct: 406 ccaagaacttcatggacctgcccaagatcaaggtgcccctcattctgggtatctggggtg 465

                  
Query: 327 gcaaggg 333
           |||||||
Sbjct: 466 gcaaggg 472



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>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                               
Query: 283  cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 333
            ||||||||| |||||| | || |||||  ||||||||||||| ||||||||
Sbjct: 1634 cctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaaggg 1684



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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 66      ccgacgaccagcaggacatcacc 88
               |||||||||||||||||||||||
Sbjct: 1452088 ccgacgaccagcaggacatcacc 1452066



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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 108     actcgctcttccaggcgcccac 129
               ||||||||||||||||||||||
Sbjct: 2553524 actcgctcttccaggcgcccac 2553503



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>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 109 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 167

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 168 tgatccgtcagcgctaccgtgaggccgcggacctgatc 205



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>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 127 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 185

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 186 tgatccgtcagcgctaccgtgaggccgcggacctgatc 223



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>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 123 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 181

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 182 tgatccgtcagcgctaccgtgaggccgcggacctgatc 219



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>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 183

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 184 tgatccgtcagcgctaccgtgaggccgcggacctgatc 221



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>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 183

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 184 tgatccgtcagcgctaccgtgaggccgcggacctgatc 221



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>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 129 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 187

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 188 tgatccgtcagcgctaccgtgaggccgcggacctgatc 225



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>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 123 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 181

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 182 tgatccgtcagcgctaccgtgaggccgcggacctgatc 219



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>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 183

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 184 tgatccgtcagcgctaccgtgaggccgcggacctgatc 221



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>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 123 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 181

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 182 tgatccgtcagcgctaccgtgaggccgcggacctgatc 219



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>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 117 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 175

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 176 tgatccgtcagcgctaccgtgaggcggcggacctgatc 213



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>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 183

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 184 tgatccgtcagcgctaccgtgaggccgcggacctgatc 221



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>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 183

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 184 tgatccgtcagcgctaccgtgaggccgcggacctgatc 221



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>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 183

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 184 tgatccgtcagcgctaccgtgaggccgcggacctgatc 221



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>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 127 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 185

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 186 tgatccgtcagcgctaccgtgaggccgcggacctgatc 223



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>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 183

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 184 tgatccgtcagcgctaccgtgaggccgcggacctgatc 221



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>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 80/98 (81%), Gaps = 1/98 (1%)
 Strand = Plus / Plus

                                                                       
Query: 385 ccccatcatgatgagtgccggagagctgggagagtgggaacgctggagagccagccaagc 444
           ||||||| ||||||| ||||| ||||| | |||| || ||||| || ||||| || ||||
Sbjct: 129 ccccatcgtgatgagcgccggcgagctag-agagcggcaacgccggtgagccggcgaagc 187

                                                 
Query: 445 tcatcaggcagcggtaccgtgaggctgcagacatgatc 482
           | ||| | ||||| ||||||||||| || ||| |||||
Sbjct: 188 tgatccgtcagcgctaccgtgaggccgcggacctgatc 225



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>gb|AC005330.2|AC005330 Homo sapiens chromosome 19, cosmid R34047 and overlapping PCR product,
             complete sequence
          Length = 41257

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 404   ggagagctgggagagtgggaa 424
             |||||||||||||||||||||
Sbjct: 19799 ggagagctgggagagtgggaa 19819



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>gb|AE010322.1| Methanopyrus kandleri AV19 section 21 of 157 of the complete genome
          Length = 10732

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 62   atctccgacgaccagcaggacatc 85
            |||||| |||||||||||||||||
Sbjct: 8676 atctcccacgaccagcaggacatc 8653



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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      gcagcggagaacatcgacga 21
              ||||||||||||||||||||
Sbjct: 173412 gcagcggagaacatcgacga 173393



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>ref|XM_520373.1| PREDICTED: Pan troglodytes LOC464867 (LOC464867), mRNA
          Length = 1685

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 125  cccacgggcgacggcacccacgag 148
            ||||||||||||| ||||||||||
Sbjct: 1369 cccacgggcgacgtcacccacgag 1392



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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     ccctgcccaacatcaagatc 301
               ||||||||||||||||||||
Sbjct: 1130357 ccctgcccaacatcaagatc 1130376



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>ref|NM_017617.2| Homo sapiens Notch homolog 1, translocation-associated (Drosophila)
           (NOTCH1), mRNA
          Length = 9312

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 cccacgggcgacggcacccacgag 148
           ||||||||||||| ||||||||||
Sbjct: 703 cccacgggcgacgtcacccacgag 726



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>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete
             sequence
          Length = 101284

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   ttccagtgtgagcttgtgtt 366
             ||||||||||||||||||||
Sbjct: 97287 ttccagtgtgagcttgtgtt 97268



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>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence
          Length = 193170

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 218    ggcttctacatcgctcctgctttc 241
              ||||||| ||||||||||||||||
Sbjct: 147044 ggcttctgcatcgctcctgctttc 147067



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>emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chromosome 9 Contains the 3'
              end of the gene for activator of G-protein signalling 3
              (AGS3), two novel genes, the CARD9 gene for caspase
              recruitment domain family member 9, the SNAPC4 gene for a
              190kDa small nuclear RNA activating complex polypeptide 4, 
              the SDCCAG3 gene for serologically defined colon cancer
              antigen 3, the INPP5E gene for a 72kDa inositol
              polyphosphate-5-phosphatase, the gene for
              phosphatidylinositol polyphosphate 5-phosphatase type IV
              (PPI5PIV), a novel gene (KIAA0310), the 3' end of the
              NOTCH1 gene for Notch homolog 1 translocation-associated
              (Drosophila) and twenty CpG islands, complete sequence
          Length = 188462

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 125    cccacgggcgacggcacccacgag 148
              ||||||||||||| ||||||||||
Sbjct: 166513 cccacgggcgacgtcacccacgag 166490



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>gb|AC104422.4| Homo sapiens chromosome 18, clone RP11-260B14, complete sequence
          Length = 147210

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    ccagagggaagggcatcgtg 106
             ||||||||||||||||||||
Sbjct: 35948 ccagagggaagggcatcgtg 35967



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>gb|AC108471.3| Homo sapiens BAC clone RP11-539G18 from 4, complete sequence
          Length = 141442

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   gtccatctctccaaaaactt 276
             ||||||||||||||||||||
Sbjct: 63248 gtccatctctccaaaaactt 63229



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>gb|AC100806.2| Homo sapiens chromosome 18, clone CTB-2341H11, complete sequence
          Length = 81641

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    ccagagggaagggcatcgtg 106
             ||||||||||||||||||||
Sbjct: 47211 ccagagggaagggcatcgtg 47230



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>gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 of 195 of the
            complete sequence
          Length = 10900

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  ccctgcccaacatcaagatc 301
            ||||||||||||||||||||
Sbjct: 7760 ccctgcccaacatcaagatc 7741



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>gb|AF308602.1|AF308602 Homo sapiens NOTCH 1 (N1) mRNA, complete cds
          Length = 7693

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 cccacgggcgacggcacccacgag 148
           ||||||||||||| ||||||||||
Sbjct: 703 cccacgggcgacgtcacccacgag 726



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 58      cgatatctccgacgaccagc 77
               ||||||||||||||||||||
Sbjct: 4182002 cgatatctccgacgaccagc 4181983



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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     ccctgcccaacatcaagatc 301
               ||||||||||||||||||||
Sbjct: 1147720 ccctgcccaacatcaagatc 1147739



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>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302
           (ENSANGG00000011813), partial mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 366 tcgccaagatgggcatcaac 385
           ||||||||||||||||||||
Sbjct: 641 tcgccaagatgggcatcaac 660



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>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete
              sequence
          Length = 219072

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 218    ggcttctacatcgctcctgctttc 241
              ||||||| ||||||||||||||||
Sbjct: 141825 ggcttctgcatcgctcctgctttc 141848



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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     ccctgcccaacatcaagatc 301
               ||||||||||||||||||||
Sbjct: 1144872 ccctgcccaacatcaagatc 1144891



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>gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltransferase (cdsA), group 1
            outer membrane protein (omp1), LpxD (lpxD), FabZ (fabZ),
            and LpxA (lpxA) genes, complete cds
          Length = 8895

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 282  ccctgcccaacatcaagatc 301
            ||||||||||||||||||||
Sbjct: 8238 ccctgcccaacatcaagatc 8219



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>gb|M73980.1|HUMTAN1 Human TAN-1 mRNA (homologue of Drosophila Notch gene), 5' end
          Length = 7332

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 125 cccacgggcgacggcacccacgag 148
           ||||||||||||| ||||||||||
Sbjct: 703 cccacgggcgacgtcacccacgag 726


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,004,539
Number of Sequences: 3902068
Number of extensions: 4004539
Number of successful extensions: 67725
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 67296
Number of HSP's gapped (non-prelim): 394
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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