ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
2gb|AY107970.1| Zea mays PCO085337 mRNA sequence 151 2e-33
3tpg|BK004880.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-gr... 145 2e-31
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
5dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic D... 145 2e-31
6ref|NG_001600.1| Rattus norvegicus metallothionein 1, pseudogene... 44 0.41
7gb|M11796.1|RATMT1PA Rat metallothionein-1 pseudogene a (MT-1-ps... 44 0.41
8ref|XM_476456.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
9dbj|AK075760.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 1.6
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
11dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
12dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
13dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
14dbj|AK068837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
15dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
16dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
17emb|AJ865375.1| Xenopus laevis mRNA for Exportin 6 (xpo6 gene) 42 1.6
18gb|BC084952.1| Xenopus laevis hypothetical LOC495496, mRNA (cDNA... 42 1.6
19gb|AY329623.1| Mus musculus cellular nucleic acid binding protei... 40 6.4
20gb|AY329622.1| Homo sapiens zinc finger protein 9 (ZNF9) gene, c... 40 6.4
21ref|XM_852656.1| PREDICTED: Canis familiaris similar to cellular... 40 6.4
22ref|XM_852611.1| PREDICTED: Canis familiaris similar to cellular... 40 6.4
23ref|XM_843913.1| PREDICTED: Canis familiaris similar to cellular... 40 6.4
24ref|XM_807593.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.4
25ref|XM_504593.1| Yarrowia lipolytica CLIB122, YALI0E30525g predi... 40 6.4
26emb|AL139113.21| Human DNA sequence from clone RP11-176F3 on chr... 40 6.4
27emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 6.4
28gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, co... 40 6.4
29gb|AC087457.5| Homo sapiens chromosome 15, clone RP11-814P5, com... 40 6.4
30gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer... 40 6.4
31gb|AY176064.1| Mus musculus cellular nucleic acid binding protei... 40 6.4
32gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Canc... 40 6.4
33gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D... 40 6.4
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
35dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
36dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
37gb|AC135587.3| Homo sapiens 3 BAC RP11-309B5 (Roswell Park Cance... 40 6.4
38gb|AC024085.5|AC024085 Human Chromosome 7 clone RP11-190G13, com... 40 6.4
39dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.4
40dbj|AK120565.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.4
41emb|BX897731.7| Zebrafish DNA sequence from clone DKEY-146J3 in ... 40 6.4
42gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Can... 40 6.4
43gb|AC008734.7| Homo sapiens chromosome 19 clone CTD-2529P6, comp... 40 6.4
44emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 6.4 
>dbj|AK066400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062O07, full
           insert sequence
          Length = 1416

 Score =  168 bits (85), Expect = 1e-38
 Identities = 190/225 (84%)
 Strand = Plus / Plus

                                                                       
Query: 243 gtgtaaagatctggtcctggtagaggaccatgtcctggtcgaggatccagaggaagcggt 302
           |||||| |||||||| || || ||||||   ||||  ||||||||||| |||||||| | 
Sbjct: 297 gtgtaaggatctggtgctcgtcgaggacgccgtccccgtcgaggatccggaggaagccgc 356

                                                                       
Query: 303 agcaactgcagcacttcaggaagaaatgagagtgcttttggcgtctgtccctgaaggtgc 362
           ||||||||||||||||||||||||||||| || |||  | |  || ||||| |  |||||
Sbjct: 357 agcaactgcagcacttcaggaagaaatgaaagcgctcgttgaatccgtcccagttggtgc 416

                                                                       
Query: 363 tggggcatcatttactgcgatgcagctgcaggagctagagcagcaatctcgggtatacca 422
           ||||||  |||| || |||||||| || |||||||| |||||||||||||| || |||||
Sbjct: 417 tggggcggcattcaccgcgatgcaactacaggagcttgagcagcaatctcgtgtctacca 476

                                                        
Query: 423 gtatatggctgcccgtgtgcccgtacctacccatctcgtcttccc 467
           ||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 477 gtatatggctgcccgtgtgcctgtgcctactcatctcgtcttccc 521



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 42  catggcggcggagggggaggacaagaa 68
           |||||||||||||||||||| ||||||
Sbjct: 84  catggcggcggagggggaggccaagaa 110
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>gb|AY107970.1| Zea mays PCO085337 mRNA sequence
          Length = 729

 Score =  151 bits (76), Expect = 2e-33
 Identities = 160/188 (85%)
 Strand = Plus / Plus

                                                                       
Query: 280 gtcgaggatccagaggaagcggtagcaactgcagcacttcaggaagaaatgagagtgctt 339
           ||||||||||| |||||||| | |||||| |||||||| ||||||||||||| || ||||
Sbjct: 394 gtcgaggatccggaggaagctgcagcaaccgcagcactccaggaagaaatgaaagcgctt 453

                                                                       
Query: 340 ttggcgtctgtccctgaaggtgctggggcatcatttactgcgatgcagctgcaggagcta 399
            |||| ||  ||||||| |||||||| ||| |||| || || |||||||| |||||||||
Sbjct: 454 gtggcatcgatccctgatggtgctggagcagcattcacagccatgcagcttcaggagcta 513

                                                                       
Query: 400 gagcagcaatctcgggtataccagtatatggctgcccgtgtgcccgtacctacccatctc 459
           |||||||| || ||||| |||||||| ||||||||||| || || || ||||| || |||
Sbjct: 514 gagcagcagtcccgggtgtaccagtacatggctgcccgagtacctgtgcctactcacctc 573

                   
Query: 460 gtcttccc 467
           ||||||||
Sbjct: 574 gtcttccc 581



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 40  accatggcggcggagggggaggacaagaa 68
           |||||| ||||||||||||||| ||||||
Sbjct: 145 accatgacggcggagggggaggccaagaa 173
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>tpg|BK004880.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group)
            growth-regulating factor 11 (GRF11) gene, complete cds
          Length = 6000

 Score =  145 bits (73), Expect = 2e-31
 Identities = 142/165 (86%)
 Strand = Plus / Plus

                                                                        
Query: 303  agcaactgcagcacttcaggaagaaatgagagtgcttttggcgtctgtccctgaaggtgc 362
            ||||||||||||||||||||||||||||| || |||  | |  || ||||| |  |||||
Sbjct: 2957 agcaactgcagcacttcaggaagaaatgaaagcgctcgttgaatccgtcccagttggtgc 3016

                                                                        
Query: 363  tggggcatcatttactgcgatgcagctgcaggagctagagcagcaatctcgggtatacca 422
            ||||||  |||| || |||||||| || |||||||| |||||||||||||| || |||||
Sbjct: 3017 tggggcggcattcaccgcgatgcaactacaggagcttgagcagcaatctcgtgtctacca 3076

                                                         
Query: 423  gtatatggctgcccgtgtgcccgtacctacccatctcgtcttccc 467
            ||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 3077 gtatatggctgcccgtgtgcctgtgcctactcatctcgtcttccc 3121



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 42   catggcggcggagggggaggacaagaa 68
            |||||||||||||||||||| ||||||
Sbjct: 1843 catggcggcggagggggaggccaagaa 1869
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  145 bits (73), Expect = 2e-31
 Identities = 142/165 (86%)
 Strand = Plus / Plus

                                                                            
Query: 303      agcaactgcagcacttcaggaagaaatgagagtgcttttggcgtctgtccctgaaggtgc 362
                ||||||||||||||||||||||||||||| || |||  | |  || ||||| |  |||||
Sbjct: 16570314 agcaactgcagcacttcaggaagaaatgaaagcgctcgttgaatccgtcccagttggtgc 16570373

                                                                            
Query: 363      tggggcatcatttactgcgatgcagctgcaggagctagagcagcaatctcgggtatacca 422
                ||||||  |||| || |||||||| || |||||||| |||||||||||||| || |||||
Sbjct: 16570374 tggggcggcattcaccgcgatgcaactacaggagcttgagcagcaatctcgtgtctacca 16570433

                                                             
Query: 423      gtatatggctgcccgtgtgcccgtacctacccatctcgtcttccc 467
                ||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 16570434 gtatatggctgcccgtgtgcctgtgcctactcatctcgtcttccc 16570478



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 42       catggcggcggagggggaggacaagaa 68
                |||||||||||||||||||| ||||||
Sbjct: 16569200 catggcggcggagggggaggccaagaa 16569226



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 41      ccatggcggcggagggggagg 61
               |||||||||||||||||||||
Sbjct: 1315364 ccatggcggcggagggggagg 1315384
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>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0003B09
          Length = 161813

 Score =  145 bits (73), Expect = 2e-31
 Identities = 142/165 (86%)
 Strand = Plus / Plus

                                                                         
Query: 303   agcaactgcagcacttcaggaagaaatgagagtgcttttggcgtctgtccctgaaggtgc 362
             ||||||||||||||||||||||||||||| || |||  | |  || ||||| |  |||||
Sbjct: 60934 agcaactgcagcacttcaggaagaaatgaaagcgctcgttgaatccgtcccagttggtgc 60993

                                                                         
Query: 363   tggggcatcatttactgcgatgcagctgcaggagctagagcagcaatctcgggtatacca 422
             ||||||  |||| || |||||||| || |||||||| |||||||||||||| || |||||
Sbjct: 60994 tggggcggcattcaccgcgatgcaactacaggagcttgagcagcaatctcgtgtctacca 61053

                                                          
Query: 423   gtatatggctgcccgtgtgcccgtacctacccatctcgtcttccc 467
             ||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 61054 gtatatggctgcccgtgtgcctgtgcctactcatctcgtcttccc 61098



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 42    catggcggcggagggggaggacaagaa 68
             |||||||||||||||||||| ||||||
Sbjct: 59820 catggcggcggagggggaggccaagaa 59846
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>ref|NG_001600.1| Rattus norvegicus metallothionein 1, pseudogene 1 (Mt1-ps1) on
           chromosome 1
          Length = 575

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 383 tgcagctgcaggagctagagca 404
           ||||||||||||||||||||||
Sbjct: 230 tgcagctgcaggagctagagca 209
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>gb|M11796.1|RATMT1PA Rat metallothionein-1 pseudogene a (MT-1-pseudo-a)
          Length = 2314

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 383 tgcagctgcaggagctagagca 404
           ||||||||||||||||||||||
Sbjct: 386 tgcagctgcaggagctagagca 365
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>ref|XM_476456.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1054

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 41 ccatggcggcggagggggagg 61
          |||||||||||||||||||||
Sbjct: 83 ccatggcggcggagggggagg 63
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>dbj|AK075760.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700030I23 product:cellular nucleic acid
           binding protein, full insert sequence
          Length = 1673

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 174 ggtgggcgaggcggaggagag 194
           |||||||||||||||||||||
Sbjct: 1   ggtgggcgaggcggaggagag 21
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 43       atggcggcggagggggaggac 63
                |||||||||||||||||||||
Sbjct: 23798998 atggcggcggagggggaggac 23799018
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>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0029C06
          Length = 156500

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 43     atggcggcggagggggaggac 63
              |||||||||||||||||||||
Sbjct: 147074 atggcggcggagggggaggac 147094
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>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    atggcggcggagggggaggac 63
             |||||||||||||||||||||
Sbjct: 38663 atggcggcggagggggaggac 38683
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>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 41    ccatggcggcggagggggagg 61
             |||||||||||||||||||||
Sbjct: 80199 ccatggcggcggagggggagg 80219
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>dbj|AK068837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159A01,
          full insert sequence
          Length = 1054

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 41 ccatggcggcggagggggagg 61
          |||||||||||||||||||||
Sbjct: 83 ccatggcggcggagggggagg 63
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>dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G13, full
           insert sequence
          Length = 1556

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 43  atggcggcggagggggaggac 63
           |||||||||||||||||||||
Sbjct: 106 atggcggcggagggggaggac 126
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>dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C12, full
           insert sequence
          Length = 1695

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 43  atggcggcggagggggaggac 63
           |||||||||||||||||||||
Sbjct: 109 atggcggcggagggggaggac 129
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>emb|AJ865375.1| Xenopus laevis mRNA for Exportin 6 (xpo6 gene)
          Length = 3408

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 135  gattctgcaggcggtagggcaagaacccggtca 167
            ||||||||||| ||||| ||||||||| |||||
Sbjct: 2712 gattctgcaggtggtagtgcaagaacctggtca 2744
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>gb|BC084952.1| Xenopus laevis hypothetical LOC495496, mRNA (cDNA clone MGC:83326
            IMAGE:6864379), complete cds
          Length = 4048

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 135  gattctgcaggcggtagggcaagaacccggtca 167
            ||||||||||| ||||| ||||||||| |||||
Sbjct: 2746 gattctgcaggtggtagtgcaagaacctggtca 2778
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>gb|AY329623.1| Mus musculus cellular nucleic acid binding protein (Cnbp) gene,
           complete cds
          Length = 8035

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 gtgggcgaggcggaggagag 194
           ||||||||||||||||||||
Sbjct: 30  gtgggcgaggcggaggagag 49
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>gb|AY329622.1| Homo sapiens zinc finger protein 9 (ZNF9) gene, complete cds
          Length = 14461

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 gtgggcgaggcggaggagag 194
           ||||||||||||||||||||
Sbjct: 97  gtgggcgaggcggaggagag 116
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>ref|XM_852656.1| PREDICTED: Canis familiaris similar to cellular nucleic acid
           binding protein 1, transcript variant 6 (LOC476518),
           mRNA
          Length = 1612

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 gtgggcgaggcggaggagag 194
           ||||||||||||||||||||
Sbjct: 5   gtgggcgaggcggaggagag 24
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>ref|XM_852611.1| PREDICTED: Canis familiaris similar to cellular nucleic acid
           binding protein 1, transcript variant 5 (LOC476518),
           mRNA
          Length = 1671

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 gtgggcgaggcggaggagag 194
           ||||||||||||||||||||
Sbjct: 10  gtgggcgaggcggaggagag 29
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>ref|XM_843913.1| PREDICTED: Canis familiaris similar to cellular nucleic acid
           binding protein 1, transcript variant 2 (LOC476518),
           mRNA
          Length = 1696

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 gtgggcgaggcggaggagag 194
           ||||||||||||||||||||
Sbjct: 5   gtgggcgaggcggaggagag 24
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>ref|XM_807593.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510535.20) partial mRNA
          Length = 8019

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 174  ggtgggcgaggcggaggaga 193
            ||||||||||||||||||||
Sbjct: 2514 ggtgggcgaggcggaggaga 2533
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>ref|XM_504593.1| Yarrowia lipolytica CLIB122, YALI0E30525g predicted mRNA
          Length = 1449

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 ggtcgaggatccagaggaag 298
           ||||||||||||||||||||
Sbjct: 131 ggtcgaggatccagaggaag 112
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>emb|AL139113.21| Human DNA sequence from clone RP11-176F3 on chromosome 9 Contains the
             3' end of the PRSS3 gene for serine protease 3
             (mesotrypsin) (MTG, TRY3, TRY4, PRSS4), the 5' end of a
             novel gene, two novel pseudogenes, a DC2 protein
             pseudogene, the UBC3B gene for ubiquitin-conjugating
             enzyme, two novel genes, the 3' end of a novel gene
             (KIAA1491, FLJ22435, FLJ21704, FLJ22148, FLJ33002) and a
             CpG island, complete sequence
          Length = 193280

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   cacttcaggaagaaatgaga 333
             ||||||||||||||||||||
Sbjct: 50180 cacttcaggaagaaatgaga 50161
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 174     ggtgggcgaggcggaggaga 193
               ||||||||||||||||||||
Sbjct: 1756512 ggtgggcgaggcggaggaga 1756531



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     ggcggaggagagtgcagatc 202
               ||||||||||||||||||||
Sbjct: 1638595 ggcggaggagagtgcagatc 1638576
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>gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, complete sequence
          Length = 186105

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    atctcgggtataccagtata 427
              ||||||||||||||||||||
Sbjct: 126046 atctcgggtataccagtata 126027
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>gb|AC087457.5| Homo sapiens chromosome 15, clone RP11-814P5, complete sequence
          Length = 141899

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    gtgggcgaggcggaggagag 194
              ||||||||||||||||||||
Sbjct: 107217 gtgggcgaggcggaggagag 107236
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>gb|AC158626.6| Mus musculus 6 BAC RP23-4F16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 240079

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gtgggcgaggcggaggagag 194
             ||||||||||||||||||||
Sbjct: 12380 gtgggcgaggcggaggagag 12399
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>gb|AY176064.1| Mus musculus cellular nucleic acid binding protein (Cnbp) gene,
            complete cds
          Length = 12191

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 175  gtgggcgaggcggaggagag 194
            ||||||||||||||||||||
Sbjct: 3319 gtgggcgaggcggaggagag 3338
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>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203418

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   gtgggcgaggcggaggagag 194
             ||||||||||||||||||||
Sbjct: 32441 gtgggcgaggcggaggagag 32422
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>gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D22, complete sequence
          Length = 183353

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    ctggtcctggtagaggacca 272
              ||||||||||||||||||||
Sbjct: 154959 ctggtcctggtagaggacca 154978
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 121    gcggcggaggaggcgattctgcag 144
              ||||| ||||||||||||||||||
Sbjct: 195487 gcggcagaggaggcgattctgcag 195464
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     ggcggaggagagtgcagatc 202
               ||||||||||||||||||||
Sbjct: 3656556 ggcggaggagagtgcagatc 3656537
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0583G08
          Length = 135295

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   ggcggaggagagtgcagatc 202
             ||||||||||||||||||||
Sbjct: 65036 ggcggaggagagtgcagatc 65017
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>gb|AC135587.3| Homo sapiens 3 BAC RP11-309B5 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 71577

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  gtgggcgaggcggaggagag 194
            ||||||||||||||||||||
Sbjct: 9824 gtgggcgaggcggaggagag 9805
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>gb|AC024085.5|AC024085 Human Chromosome 7 clone RP11-190G13, complete sequence
          Length = 168405

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 253  ctggtcctggtagaggacca 272
            ||||||||||||||||||||
Sbjct: 4665 ctggtcctggtagaggacca 4684
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>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0066B16
          Length = 190143

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 121   gcggcggaggaggcgattctgcag 144
             ||||| ||||||||||||||||||
Sbjct: 90985 gcggcagaggaggcgattctgcag 90962
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>dbj|AK120565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133J10, full
           insert sequence
          Length = 3753

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 121 gcggcggaggaggcgattctgcag 144
           ||||| ||||||||||||||||||
Sbjct: 31  gcggcagaggaggcgattctgcag 54
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>emb|BX897731.7| Zebrafish DNA sequence from clone DKEY-146J3 in linkage group 4,
             complete sequence
          Length = 99029

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 381   gatgcagctgcaggagctagagca 404
             ||||| ||||||||||||||||||
Sbjct: 13969 gatgctgctgcaggagctagagca 13946
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>gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 230270

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    atctcgggtataccagtata 427
              ||||||||||||||||||||
Sbjct: 183205 atctcgggtataccagtata 183224
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>gb|AC008734.7| Homo sapiens chromosome 19 clone CTD-2529P6, complete sequence
          Length = 183137

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    agcaactgcagcacttcagg 322
              ||||||||||||||||||||
Sbjct: 134873 agcaactgcagcacttcagg 134854
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 279     ggtcgaggatccagaggaag 298
               ||||||||||||||||||||
Sbjct: 3590838 ggtcgaggatccagaggaag 3590819


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,690,738
Number of Sequences: 3902068
Number of extensions: 3690738
Number of successful extensions: 74570
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74189
Number of HSP's gapped (non-prelim): 381
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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