ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd2g20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 811 bits (409), Expect = 0.0 Identities = 464/484 (95%), Gaps = 3/484 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||| Sbjct: 78611 taaaaataatagagaattaaaaattttaacttgaaacaagaactacaaatttaaagcaat 78552 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78551 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 78492 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78491 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 78432 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78431 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 78372 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78371 aacaaaccaaaaaaattgtcttatttggtaagtttataaattaacaaataagacaggaaa 78312 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78311 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 78252 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctataaatatagaattta 431 |||| ||||||||||| ||||| ||||||| ||| ||||||||||||||||||||||| Sbjct: 78251 gagtcaaaataaggatttttttaagaaggattac---attatctataaatatagaattta 78195 Query: 432 gataaatatccacacacatctggatatattctagatcttcttttttgactatatattata 491 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78194 gataaatatacacacacatctggatatattctagatcttcttttttgactatatattata 78135 Query: 492 tttt 495 |||| Sbjct: 78134 tttt 78131
>gb|DQ113928.1| Calamagrostis muiriana isolate B1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 656 bits (331), Expect = 0.0 Identities = 441/478 (92%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| | |||| ||||||||||| |||||||| |||||| ||||||| Sbjct: 486 taaaaataatagagaattagaaatcgtaacttgaaacaagaactagaaatttaaagcaat 427 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattttttgg 367 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgacagaac 307 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 306 ctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggatggcgg 247 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 aacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaa 187 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 186 gagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattcaataa 127 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctat-aaatatagaattt 430 ||||||||||||||||||||||| ||||| ||| || |||||| ||||||||||||| Sbjct: 126 gagtaaaaataaggatattttttttaaggattac---atcatctataaaatatagaattt 70 Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 69 agataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113934.1| Calamagrostis breweri isolate X17 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 640 bits (323), Expect = e-180 Identities = 439/478 (91%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| | |||| |||||||||| |||||||| |||||| ||||||| Sbjct: 486 taaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaagcaat 427 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattttttgg 367 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgacagaac 307 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 306 ctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggatggcgg 247 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 aacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaa 187 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 186 gagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattcaataa 127 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctat-aaatatagaattt 430 ||||||||||||||||||||||| ||||| ||| || ||| || ||||||||||||| Sbjct: 126 gagtaaaaataaggatattttttttaaggattac---atcatccataaaatatagaattt 70 Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 69 agataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113933.1| Calamagrostis breweri isolate RMP0198 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 640 bits (323), Expect = e-180 Identities = 439/478 (91%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| | |||| |||||||||| |||||||| |||||| ||||||| Sbjct: 486 taaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaagcaat 427 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattttttgg 367 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgacagaac 307 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 306 ctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggatggcgg 247 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 aacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaa 187 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 186 gagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattcaataa 127 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctat-aaatatagaattt 430 ||||||||||||||||||||||| ||||| ||| || ||| || ||||||||||||| Sbjct: 126 gagtaaaaataaggatattttttttaaggattac---atcatccataaaatatagaattt 70 Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 69 agataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113932.1| Calamagrostis breweri isolate BW8259 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 640 bits (323), Expect = e-180 Identities = 439/478 (91%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| | |||| |||||||||| |||||||| |||||| ||||||| Sbjct: 486 taaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaagcaat 427 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattttttgg 367 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgacagaac 307 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 306 ctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggatggcgg 247 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 aacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaa 187 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 186 gagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattcaataa 127 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctat-aaatatagaattt 430 ||||||||||||||||||||||| ||||| ||| || ||| || ||||||||||||| Sbjct: 126 gagtaaaaataaggatattttttttaaggattac---atcatccataaaatatagaattt 70 Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 69 agataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113931.1| Calamagrostis breweri isolate RMP0007 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 640 bits (323), Expect = e-180 Identities = 439/478 (91%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| | |||| |||||||||| |||||||| |||||| ||||||| Sbjct: 486 taaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaagcaat 427 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattttttgg 367 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgacagaac 307 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 306 ctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggatggcgg 247 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 aacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaa 187 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 186 gagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattcaataa 127 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctat-aaatatagaattt 430 ||||||||||||||||||||||| ||||| ||| || ||| || ||||||||||||| Sbjct: 126 gagtaaaaataaggatattttttttaaggattac---atcatccataaaatatagaattt 70 Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 69 agataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113930.1| Calamagrostis muiriana isolate B4 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 640 bits (323), Expect = e-180 Identities = 439/478 (91%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| | |||| |||||||||| |||||||| |||||| ||||||| Sbjct: 486 taaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaagcaat 427 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattttttgg 367 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgacagaac 307 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 306 ctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggatggcgg 247 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 aacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaa 187 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 186 gagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattcaataa 127 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctat-aaatatagaattt 430 ||||||||||||||||||||||| ||||| ||| || ||| || ||||||||||||| Sbjct: 126 gagtaaaaataaggatattttttttaaggattac---atcatccataaaatatagaattt 70 Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 69 agataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113929.1| Calamagrostis muiriana isolate B3 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 640 bits (323), Expect = e-180 Identities = 439/478 (91%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| | |||| |||||||||| |||||||| |||||| ||||||| Sbjct: 486 taaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaagcaat 427 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattttttgg 367 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgacagaac 307 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 306 ctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggatggcgg 247 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 aacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaa 187 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 186 gagtaaatattcgcccgcgaaatactttttgaattagaatactttaccattattcaataa 127 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctat-aaatatagaattt 430 ||||||||||||||||||||||| ||||| ||| || ||| || ||||||||||||| Sbjct: 126 gagtaaaaataaggatattttttttaaggattac---atcatccataaaatatagaattt 70 Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 69 agataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113927.1| Calamagrostis muiriana isolate A7 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 640 bits (323), Expect = e-180 Identities = 439/478 (91%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| | |||| |||||||||| |||||||| |||||| ||||||| Sbjct: 486 taaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaagcaat 427 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattttttgg 367 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgacagaac 307 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 306 ctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggatggcgg 247 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 aacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaa 187 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 186 gagtaaatattcgcccgcgaaatactttttgaattagaatactttacctttattcaataa 127 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctat-aaatatagaattt 430 ||||||||||||||||||||||| ||||| ||| || ||| || ||||||||||||| Sbjct: 126 gagtaaaaataaggatattttttttaaggattac---atcatccataaaatatagaattt 70 Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 69 agataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|DQ113926.1| Calamagrostis muiriana isolate A1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 640 bits (323), Expect = e-180 Identities = 439/478 (91%), Gaps = 4/478 (0%) Strand = Plus / Minus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||| ||||||||||| | |||| |||||||||| |||||||| |||||| ||||||| Sbjct: 486 taaaaataatagagaattagaaatcataacttgaaacaagaactagaaatttaaagcaat 427 Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 aataaagagccgccctggttaataaaactgagaaaattaactcggaaagaaattttttgg 367 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 aagctccattgtggaattcagacctaaccattcaaggagaagcagtgggaacgacagaac 307 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 306 ctatgattccataggattttattgaaaagaatcctaatacttcattgggtgggatggcgg 247 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 246 aacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaa 187 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 186 gagtaaatattcgcccgcgaaatactttttgaattagaatactttacctttattcaataa 127 Query: 372 gagtaaaaataaggatattttttagaaggactacattattatctat-aaatatagaattt 430 ||||||||||||||||||||||| ||||| ||| || ||| || ||||||||||||| Sbjct: 126 gagtaaaaataaggatattttttttaaggattac---atcatccataaaatatagaattt 70 Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 69 agataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 12
>gb|AY847072.1| Melica altissima ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1139 Score = 583 bits (294), Expect = e-163 Identities = 413/452 (91%), Gaps = 6/452 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||| ||| ||||| ||||||||| ||||||||||||||||||||| |||| Sbjct: 344 aaatcgtaacttaaaataagaagtacaaatttaaagcaataataaagagccgccgcggtt 403 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||||||||||||| | ||||| ||||||||| |||||||||||| Sbjct: 404 aataaaactgagaaaattaactcggaaaaacattttaaggaagctccattgcgggattca 463 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 464 gacctaaccattcagggagaagcagtgggaacgacagaacctatgactccataggatttt 523 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 524 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtc 583 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 ttatttggtaagattataaattaacaaataagacaggaaagagtaaatattcgcccgcga 643 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataa--ggatat 389 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 644 aatacttattgaattagaatactttaccgcgattcaataagagtaaaaataaatagattt 703 Query: 390 tttttagaaggactacattattatctataaatatagaatttagataaatatccacacaca 449 |||| ||||||| ||| |||||||||||| ||||||| |||||||||| || ||||| Sbjct: 704 ttttaagaaggattac---attatctataaa-atagaatatagataaatagacatacaca 759 Query: 450 tctggatatattctagatcttcttttttgact 481 ||||||||||||||||||||||||| |||||| Sbjct: 760 tctggatatattctagatcttctttcttgact 791
>gb|AY847115.1| Streptogyna americana ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1160 Score = 577 bits (291), Expect = e-161 Identities = 419/462 (90%), Gaps = 9/462 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| || |||||||||||||||||||||||| ||||||||| Sbjct: 379 aaatcgtaacttgaaacaagaaataaaaattttaagcaataataaagagcggcccgggtt 438 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 ||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 439 aataaaactgataaaattgactcggaaagaaattttttggaagctccattgcgggattca 498 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 499 aacctaaccattaaaggagaagcagtgggaacgacagaacctatgactgcataggatttt 558 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 559 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 618 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 ttatttggtaaggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcga 678 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggatattt 391 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 679 aatctttattgaattagaatactttaccgcgattcaataagagtaaaaataaggagattt 738 Query: 392 ttt-----agaaggactacattattatctataaatatagaatttagataaatatccacac 446 ||| |||| || ||| |||||||||||| ||||||| |||||||||| ||||| Sbjct: 739 tttttttaagaaagattac---attatctataaa-atagaatatagataaataaacacac 794 Query: 447 acatctggatatattctagatcttcttttttgactatatatt 488 |||||| ||||||||||||||||||||| || |||||||||| Sbjct: 795 acatctagatatattctagatcttctttcttcactatatatt 836
>gb|AY912212.1| Sirochloa parvifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1217 Score = 575 bits (290), Expect = e-161 Identities = 421/466 (90%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 390 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 449 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 450 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 509 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 510 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 569 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 570 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaataattgcc 629 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 689 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 749 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 750 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 806 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 807 acacacatctagatatattctagatcttctttcttgactatatatt 852
>gb|AY847092.1| Arundoclaytonia dissimilis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 573 bits (289), Expect = e-160 Identities = 418/461 (90%), Gaps = 8/461 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 276 aaatcgtaactcgaaacaagaaatacaaattttaagcaataataaagagcggcccgggtt 335 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 || ||||||||||||||| |||||||||||||||||||||||||||| ||| || ||||| Sbjct: 336 aagaaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggaattca 395 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 396 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgaatggataggatttt 455 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 456 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 515 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 ttatttggtaaggttacaaattaacaaataagacaggaaagagtaaatattcgcccgcga 575 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggatattt 391 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 576 aatctttattgaattagaatactttaccgcgattcaataagagtaaaaataaggagattt 635 Query: 392 ttt----agaaggactacattattatctataaatatagaatttagataaatatccacaca 447 ||| ||||||| ||||||||| |||||| ||||||| |||||||||| |||||| Sbjct: 636 ttttaaaagaaggattacattatt---tataaa-atagaatatagataaatagacacaca 691 Query: 448 catctggatatattctagatcttcttttttgactatatatt 488 ||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 692 catctagatatattctagatcttctttcttgactatatatt 732
>gb|AY912213.1| Valiha diffusa ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1163 Score = 567 bits (286), Expect = e-158 Identities = 420/466 (90%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||| Sbjct: 389 aaatcgtaacttgaaacaagaaatacaaattttaaacaataataaagagcggcccgggtt 448 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 449 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 508 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 509 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 568 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 569 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaataattgcc 628 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct: 629 ttatttggtaaggttataatataaattaacaaataagacaggaaagagttaatattcgcc 688 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 748 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| | |||||||| | Sbjct: 749 gattttttgttaagaaagattac---attatctataaatatagaatatggataaatagac 805 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 806 acacacatctagatatattctagatcttctttcttgactatatatt 851
>gb|AY912207.1| Nastus borbonicus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 567 bits (286), Expect = e-158 Identities = 420/466 (90%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 399 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 458 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 459 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 518 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 519 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 578 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 579 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 638 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 698 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 699 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 758 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| ||||||||||||||| |||| |||||||||| | Sbjct: 759 gattttttgttaagaaagattac---attatctataaatatggaatatagataaatagac 815 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 816 acacacatctagatatattctagatcttctttcttgactatatatt 861
>gb|AY912202.1| Cathariostachys madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1085 Score = 567 bits (286), Expect = e-158 Identities = 420/466 (90%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 390 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 449 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 450 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 509 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 510 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 569 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 570 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaataattgcc 629 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 ttatttgataaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 689 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 749 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 750 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 806 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 807 acacacatctagatatattctagatcttctttcttgactatatatt 852
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 567 bits (286), Expect = e-158 Identities = 420/466 (90%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 395 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 454 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 455 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 514 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 515 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 574 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 575 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 634 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 694 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 754 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||| ||||||||||||| |||||||||| | Sbjct: 755 gattttttgttaagaaagattac---attatccataaatatagaatatagataaatagac 811 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 812 acacacatctagatatattctagatcttctttcttgactatatatt 857
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 567 bits (286), Expect = e-158 Identities = 420/466 (90%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 400 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 459 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 460 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 519 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 520 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 579 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 580 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 639 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 699 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 759 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||| ||||||||||||| |||||||||| | Sbjct: 760 gattttttgttaagaaagattac---attatccataaatatagaatatagataaatagac 816 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 817 acacacatctagatatattctagatcttctttcttgactatatatt 862
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 567 bits (286), Expect = e-158 Identities = 420/466 (90%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 397 aaatcgtaactcgaaacaagaaatacaaattttaagcaataataaagagcggcccgggtt 456 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 || ||||||||||||||| |||||||||||||||||||||||||||| ||| || ||||| Sbjct: 457 aagaaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggaattca 516 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 517 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgaatggataggatttt 576 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 577 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 636 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 696 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 756 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| ||||||| ||||||||| |||||||||||||| |||||||||| | Sbjct: 757 gatttttttaaaagaaggattacattatt---tataaatatagaatatagataaatagac 813 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 814 acacacatctagatatattctagatcttctttcttgactatatatt 859
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 565 bits (285), Expect = e-158 Identities = 416/459 (90%), Gaps = 6/459 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| Sbjct: 345 aaatcgtaacttaaaataagaactacaaattcaaagcaataataaagagccgccgcagtt 404 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 | |||||||||||||||||||||||||| | |||||| ||||||||| |||||||||||| Sbjct: 405 agtaaaactgagaaaattaactcggaaacatatttttaggaagctccattgcgggattca 464 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 465 gacctaaccattcagggagaagcagtgggaacgacagaacctatgactccataggatttt 524 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||| ||||||||||||| |||||||||||||||||||||||||||||| || || Sbjct: 525 attaaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattctc 584 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 ttatttggtaagcttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 644 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggatattt 391 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 645 aatacttattgaattagaatactttaccgcgattcaataagagtaaaaataaagatattt 704 Query: 392 ttt--agaaggactacattattatctataaatatagaatttagataaatatccacacaca 449 ||| ||||||| ||| |||||||| ||| ||||||| |||||||||| || ||||| Sbjct: 705 ttttaagaaggattac---attatctagaaa-atagaatatagataaatagacatacaca 760 Query: 450 tctggatatattctagatcttcttttttgactatatatt 488 ||| |||||||||| |||||||||| ||||||||||||| Sbjct: 761 tctagatatattctggatcttctttcttgactatatatt 799
>gb|AY912199.1| Cephalostachyum pergracile ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1226 Score = 559 bits (282), Expect = e-156 Identities = 419/466 (89%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 399 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 458 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 459 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 518 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 519 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 578 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 579 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 638 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 698 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 699 cgcgaaatctttattgaattaaaatactttaccgcgattcaataagagtaaaaataagga 758 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 759 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 815 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| || |||||||||| Sbjct: 816 acacacatctagatatattctagatcttctttctttactatatatt 861
>gb|AY912206.1| Hickelia madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1108 Score = 557 bits (281), Expect = e-155 Identities = 415/461 (90%), Gaps = 12/461 (2%) Strand = Plus / Plus Query: 37 gtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataa 96 ||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||| Sbjct: 400 gtaacttgaaacaagaaatacaaatttaaaacaataataaagagccgcccgggttaataa 459 Query: 97 aactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacct 156 ||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 460 aactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattcagacct 519 Query: 157 aaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattga 216 ||||||| ||||||||| ||||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 520 aaccattaaaggagaagtagtgggaacgacaaaacctatgactgcataggattttcttga 579 Query: 217 aaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatt 276 |||||||||||| |||||||||||||||||||||||||||||| ||| |||||| Sbjct: 580 aaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatt 639 Query: 277 tggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 ||||||| | |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 640 tggtaaggttataatataaattaacaaataagacaggaaagagtaaattttcgcccgcga 699 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggatattt 391 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 700 aatctttattgaattagaatactttaccgcgattcaataagagtaaaaataaggagattt 759 Query: 392 ttt----agaaggactacattattatctataaatatagaatttagataaatatccacaca 447 ||| |||| || ||| |||||||||||||||||||| |||||||||| |||||| Sbjct: 760 tttgttaagaaagattac---attatctataaatatagaatatagataaatagacacaca 816 Query: 448 catctggatatattctagatcttcttttttgactatatatt 488 ||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 817 catctagatatattctagatcttctttcttgactatatatt 857
>gb|AY912211.1| Perrierbambus madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1214 Score = 553 bits (279), Expect = e-154 Identities = 421/470 (89%), Gaps = 13/470 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| |||||||||| | ||||||||||||| ||||||||| Sbjct: 381 aaatcgtaacttgaaacaagaaatacaaatttttaaaaataataaagagcggcccgggtt 440 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 441 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 500 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 501 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 560 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 561 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaataattgcc 620 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 680 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 cgggaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 740 Query: 387 tatttttt----agaaggactacat----tattatctataaatatagaatttagataaat 438 ||||||| |||| || ||||| ||| ||||||||||||||||| ||||||||| Sbjct: 741 gattttttgttaagaaagattacattatctataatctataaatatagaatatagataaat 800 Query: 439 atccacacacatctggatatattctagatcttcttttttgactatatatt 488 | ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 801 agacacacacatctagatatattctagatcttctttcttgactatatatt 850
>gb|AF133461.1|AF133461 Buergersiochloa bambusoides ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1216 Score = 553 bits (279), Expect = e-154 Identities = 415/458 (90%), Gaps = 6/458 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||||||||||||||| ||||| ||||||||| ||||||||||||||||| || |||||| Sbjct: 415 aaattgtaacttgaaacaagaaatacaaatttaaagcaataataaagagcagctcgggtt 474 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 475 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 534 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagga-ttt 210 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||| ||| Sbjct: 535 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactacataggatttt 594 Query: 211 tattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgt 270 | ||||||||||| |||| |||||||||||||||||||||||||||||| ||| Sbjct: 595 ttttgaaaagaattctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgc 654 Query: 271 cttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcg 330 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 cttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcg 714 Query: 331 aaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggatatt 390 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 715 aaatccttattgaattagaatactttaccgcgattcaataagagt-aaaataaggagatt 773 Query: 391 ttttagaaggactacattattatctataaatatagaatttagataaatatccacacacat 450 |||| | | |||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 774 ttttttta-taatacatt---atctataaatatagaatatagataaatagacacacacat 829 Query: 451 ctggatatattctagatcttcttttttgactatatatt 488 || |||||||||| |||||||||| ||||||||||||| Sbjct: 830 ctagatatattctggatcttctttcttgactatatatt 867
>gb|AY912214.1| Temburongia simplex ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1075 Score = 551 bits (278), Expect = e-154 Identities = 418/466 (89%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| |||||||||||| |||||||||||||| ||||||||| Sbjct: 297 aaatcgtaacttgaaacaagaaatacaaattttaaacaataataaagagcggcccgggtt 356 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||||| Sbjct: 357 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggaattca 416 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 417 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 476 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| || | Sbjct: 477 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatttcc 536 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | |||||||||||||||||||||||||||||||| |||||||| Sbjct: 537 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaattattcgcc 596 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 597 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaattaagga 656 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 657 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 713 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 714 acacacatctagatatattctagatcttctttcttgactatatatt 759
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 551 bits (278), Expect = e-154 Identities = 418/466 (89%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 398 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 457 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 ||||||||||| |||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 458 aataaaactgataaaattgactcggaaagaaattttttggaagctccattgtgggattca 517 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||| |||| ||||||||| ||||||||||||||||||||||| | || |||||||| Sbjct: 518 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcacaggatttt 577 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 578 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 637 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ttatttggtaaggttttaatataaattaacaaataagacaggaaagagtaaatattcgcc 697 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 757 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 758 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 814 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 815 acacacatctagatatattctagatcttctttcttgactatatatt 860
>gb|AF133471.1|AF133471 Glaziophyton mirabile ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 545 bits (275), Expect = e-152 Identities = 418/466 (89%), Gaps = 14/466 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 418 aaatcgtaactcgaaacaagaaatacaaattttaagcaataataaagagcggcccgggtt 477 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||| | Sbjct: 478 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggaattaa 537 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 538 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 597 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 598 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 657 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 717 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 718 cgcgaaatccttattgaattagaatactttaccgcgattcaataagag-caaaataagga 776 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 777 gatttttttttaagaaagattaca----tatctataaatatagaatatagataaatagac 832 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 833 acacacatctagatatattctagatcttctttcttgactatatatt 878
>gb|AF133469.1|AF133469 Nastus elatus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 545 bits (275), Expect = e-152 Identities = 418/466 (89%), Gaps = 14/466 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 421 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 480 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 481 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 540 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 541 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 600 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 601 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 660 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 720 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 721 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagt-aaaataagga 779 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 780 gattttttgttaagaaagattaca----tatctataaatatagaatatagataaatagac 835 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 836 acacacatctagatatattctagatcttctttcttgactatatatt 881
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 545 bits (275), Expect = e-152 Identities = 418/466 (89%), Gaps = 14/466 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 422 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 481 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 482 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 541 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 542 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 601 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 602 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 661 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 721 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 722 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagt-aaaataagga 780 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 781 gattttttgttaagaaagattaca----tatctataaatatagaatatagataaatagac 836 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 837 acacacatctagatatattctagatcttctttcttgactatatatt 882
>gb|U54747.1|SLU54747 Schizostachyum luzonicum ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 545 bits (275), Expect = e-152 Identities = 418/466 (89%), Gaps = 14/466 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 399 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 458 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 459 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 518 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 519 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 578 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 579 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 638 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 698 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 699 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagt-aaaataagga 757 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 758 gattttttgttaagaaagattaca----tatctataaatatagaatatagataaatagac 813 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 814 acacacatctagatatattctagatcttctttcttgactatatatt 859
>gb|U54746.1|NEU54746 Nastus elatus ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1071 Score = 545 bits (275), Expect = e-152 Identities = 418/466 (89%), Gaps = 14/466 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 398 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 457 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 458 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 517 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 518 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 577 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 578 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 637 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 697 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 698 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagt-aaaataagga 756 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 757 gattttttgttaagaaagattaca----tatctataaatatagaatatagataaatagac 812 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 813 acacacatctagatatattctagatcttctttcttgactatatatt 858
>gb|U54748.1|GMU54748 Glaziophyton mirabile ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1068 Score = 545 bits (275), Expect = e-152 Identities = 418/466 (89%), Gaps = 14/466 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 395 aaatcgtaactcgaaacaagaaatacaaattttaagcaataataaagagcggcccgggtt 454 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||| | Sbjct: 455 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggaattaa 514 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 515 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 574 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 575 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 634 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 694 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 cgcgaaatccttattgaattagaatactttaccgcgattcaataagag-caaaataagga 753 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || |||| |||||||||||||||||| |||||||||| | Sbjct: 754 gatttttttttaagaaagattaca----tatctataaatatagaatatagataaatagac 809 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 810 acacacatctagatatattctagatcttctttcttgactatatatt 855
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 543 bits (274), Expect = e-151 Identities = 417/466 (89%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 402 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 461 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 462 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 521 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 522 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 581 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||| ||||||||||||||||||||||||| ||| | Sbjct: 582 attgaaaagaatcctaatactttattgggtgggatggcggaacaaaccaaaaaaattgcc 641 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 ttatttgctaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 701 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 702 cgcgaaatctttattgaattagaatactttatcgcgattcaataagagtaaaaataagga 761 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 762 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 818 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 819 acacacatctagatatattctagatcttctttcttgactatatatt 864
>gb|AY912203.1| Decaryochloa diadelpha ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1173 Score = 543 bits (274), Expect = e-151 Identities = 417/466 (89%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| |||||||| || |||||||||||||| ||||||||| Sbjct: 397 aaatcgtaacttgaaacaagaaatacaaattgaaaacaataataaagagcggcccgggtt 456 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 457 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 516 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 517 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 576 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 577 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaataattgcc 636 Query: 272 ttatttggtaagtttat-----aaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 637 ttatttggtaaggttataataaaaattaacaaataagacaggaaagagtcaatattcgcc 696 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 756 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 757 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 813 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| |||||||||| |||||||||| || |||||||||| Sbjct: 814 acacacatctagatatattctggatcttctttctttactatatatt 859
>gb|AF133470.1|AF133470 Bambusa longispiculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1206 Score = 537 bits (271), Expect = e-149 Identities = 417/466 (89%), Gaps = 14/466 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 416 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 475 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 476 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 535 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 536 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggattta 595 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 596 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtc 655 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 715 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 716 cgcgaaatctttattgaattagaatacttaaccgcgattcaataagagt-aaaataagga 774 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| ||||| ||||||||||||| |||||||||| | Sbjct: 775 gattttttgttaagaaagattac----ttatccataaatatagaatatagataaatagac 830 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 831 acacacatctagatatattctagatcttctttcttgactatatatt 876
>gb|U54745.1|BLU54745 Bambusa longispiculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 537 bits (271), Expect = e-149 Identities = 417/466 (89%), Gaps = 14/466 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 393 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 452 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 453 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 512 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 513 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggattta 572 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 573 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtc 632 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 692 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 693 cgcgaaatctttattgaattagaatacttaaccgcgattcaataagagt-aaaataagga 751 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| ||||| ||||||||||||| |||||||||| | Sbjct: 752 gattttttgttaagaaagattac----ttatccataaatatagaatatagataaatagac 807 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 808 acacacatctagatatattctagatcttctttcttgactatatatt 853
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 535 bits (270), Expect = e-149 Identities = 417/466 (89%), Gaps = 13/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaa-----gagccgccc 86 |||| ||||||||||| || || || |||||||||||||||||||| |||| |||| Sbjct: 420 aaatcgtaacttgaaacaaaaaatagaaattttaagcaataataaaataaagagcggccc 479 Query: 87 gggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggg 146 ||||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 480 gggttaataaaactgagaaaattgactcggaaagaaatttttggaaagctccattgcggg 539 Query: 147 attcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg 206 ||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||| Sbjct: 540 attcagacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcatagg 599 Query: 207 attttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnn 266 |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 600 attttattgaaaagaatcctaagacttcattgggtgggatggcggaacaaaccaaaaaaa 659 Query: 267 ttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcc 326 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 ttgccttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcc 719 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 720 cgcgaaatctttattgaattagaatactttcccgcgattcaataagagt-caaataagga 778 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 779 gatttttttttaagaaagattac---attatctataaatatagaatatagataaatagac 835 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 836 acacacatctagatatattctagatcttctttcttgactatatatt 881
>gb|U54742.1|AGU54742 Arundinaria gigantea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 535 bits (270), Expect = e-149 Identities = 417/466 (89%), Gaps = 13/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaa-----gagccgccc 86 |||| ||||||||||| || || || |||||||||||||||||||| |||| |||| Sbjct: 397 aaatcgtaacttgaaacaaaaaatagaaattttaagcaataataaaataaagagcggccc 456 Query: 87 gggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggg 146 ||||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 457 gggttaataaaactgagaaaattgactcggaaagaaatttttggaaagctccattgcggg 516 Query: 147 attcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg 206 ||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||| Sbjct: 517 attcagacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcatagg 576 Query: 207 attttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnn 266 |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 577 attttattgaaaagaatcctaagacttcattgggtgggatggcggaacaaaccaaaaaaa 636 Query: 267 ttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcc 326 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 ttgccttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcc 696 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 697 cgcgaaatctttattgaattagaatactttcccgcgattcaataagagt-caaataagga 755 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 756 gatttttttttaagaaagattac---attatctataaatatagaatatagataaatagac 812 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 813 acacacatctagatatattctagatcttctttcttgactatatatt 858
>gb|AY912216.1| Streptogyna americana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1172 Score = 533 bits (269), Expect = e-148 Identities = 420/472 (88%), Gaps = 18/472 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| || |||||||||||||||||||||||| ||||||||| Sbjct: 380 aaatcgtaacttgaaacaagaaataaaaattttaagcaataataaagagcggcccgggtt 439 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 ||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 440 aataaaactgataaaattgactcggaaagaaattttttggaagctccattgcgggattca 499 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 500 aacctaaccattaaaggagaagcagtgggaacgacagaacctatgactgcataggatttt 559 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 560 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 619 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 ttatttggtaaggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcga 679 Query: 332 aattcttattgaattagaatactttaccgcgattcaat-----aagag-----taaaaat 381 ||| ||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 680 aatctttattgaattagaatactttaccgcgattcaattcaataagagtaaaataaaaat 739 Query: 382 aaggatatttttt-----agaaggactacattattatctataaatatagaatttagataa 436 ||||| ||||||| |||| || ||||| |||||||||||||||||| ||||||| Sbjct: 740 aaggagattttttttttaagaaagattacat---tatctataaatatagaatatagataa 796 Query: 437 atatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||| ||||||||||| ||||||||||||||||||||| || |||||||||| Sbjct: 797 ataaacacacacatctagatatattctagatcttctttcttcactatatatt 848
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 529 bits (267), Expect = e-147 Identities = 416/466 (89%), Gaps = 13/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaa-----gagccgccc 86 |||| ||||||||||| || || || |||||||||||||||||||| |||| |||| Sbjct: 420 aaatcgtaacttgaaacaaaaaatagaaattttaagcaataataaaataaagagcggccc 479 Query: 87 gggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggg 146 ||||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 480 gggttaataaaactgagaaaattgactcggaaagaaatttttggaaagctccattgcggg 539 Query: 147 attcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg 206 ||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||| Sbjct: 540 attcagacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcatagg 599 Query: 207 attttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnn 266 |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 600 attttattgaaaagaatcctaagacttcattgggtgggatggcggaacaaaccaaaaaaa 659 Query: 267 ttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcc 326 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 ttgccttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcc 719 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||||| Sbjct: 720 cgcgaaatctttattgaattagantactttcccgcgattcaataagagt-caaataagga 778 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 779 gatttttttttaagaaagattac---attatctataaatatagaatatagataaatagac 835 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 836 acacacatctagatatattctagatcttctttcttgactatatatt 881
>gb|U54743.1|PJU54743 Pseudosasa japonica ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 529 bits (267), Expect = e-147 Identities = 416/466 (89%), Gaps = 13/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaa-----gagccgccc 86 |||| ||||||||||| || || || |||||||||||||||||||| |||| |||| Sbjct: 397 aaatcgtaacttgaaacaaaaaatagaaattttaagcaataataaaataaagagcggccc 456 Query: 87 gggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggg 146 ||||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||||| Sbjct: 457 gggttaataaaactgagaaaattgactcggaaagaaatttttggaaagctccattgcggg 516 Query: 147 attcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg 206 ||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||| Sbjct: 517 attcagacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcatagg 576 Query: 207 attttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnn 266 |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 577 attttattgaaaagaatcctaagacttcattgggtgggatggcggaacaaaccaaaaaaa 636 Query: 267 ttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcc 326 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 ttgccttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcc 696 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||||| Sbjct: 697 cgcgaaatctttattgaattagantactttcccgcgattcaataagagt-caaataagga 755 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 756 gatttttttttaagaaagattac---attatctataaatatagaatatagataaatagac 812 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 813 acacacatctagatatattctagatcttctttcttgactatatatt 858
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 523 bits (264), Expect = e-145 Identities = 415/466 (89%), Gaps = 10/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 398 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 457 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 458 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 517 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 518 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 577 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||| ||| ||||||||||||||||||||||||||| || ||| | Sbjct: 578 attgaaaagaatcataatacttcattgggtgggatggcggaacaacccaaaaaaattgcc 637 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 638 ttatttggtaaggttataatataaattagcaaataagacaggaaagagtaaatattcgcc 697 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 698 cgcgaaatctttattgaattaaaatactttaccgcgattcaataagagtaaaaataagga 757 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||||||| | | |||| ||||||||| |||||||||| | Sbjct: 758 gattttttgttaagaaagattacatta-tctatatatatatagaatatagataaatagac 816 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| || |||||||||| Sbjct: 817 acacacatctagatatattctagatcttctttctttactatatatt 862
>gb|AY912209.1| Nastus elongatus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1098 Score = 521 bits (263), Expect = e-145 Identities = 414/466 (88%), Gaps = 18/466 (3%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 279 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccgggtt 338 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 339 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 398 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 399 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 458 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 459 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaataattgcc 518 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 578 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 579 cgcgaaatcttt------ttagaatactttaccgcgattcaataagagtaaaaataagaa 632 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 633 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 689 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 690 acacacatctagatatattctagatcttctttcttgactatatatt 735
>gb|AY912190.1| Atractantha radiata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1175 Score = 519 bits (262), Expect = e-144 Identities = 420/474 (88%), Gaps = 22/474 (4%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||||| |||| ||||| |||||||||||||||| |||||||||| ||||||||| Sbjct: 400 aaatcgtaactcgaaacaagaaatacaaattttaagcaagaataaagagcggcccgggtt 459 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||||| Sbjct: 460 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggaattca 519 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 520 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 579 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 580 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 639 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 699 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgatt-----caataagagtaaaaat 381 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 700 cgcgaaat--ttattgaattagaatactttaccgcgattcaatacaataagagtaaaaat 757 Query: 382 aaggatatttttt-------agaaggactacattattatctataaatatagaatttagat 434 ||||| ||||||| |||| || ||||| |||||||||||||||||| ||||| Sbjct: 758 aaggagattttttttttttaagaaagattacat---tatctataaatatagaatatagat 814 Query: 435 aaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 815 aaatagacacacacatctagatatattctagatcttctttcttgactatatatt 868
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 519 bits (262), Expect = e-144 Identities = 415/466 (89%), Gaps = 13/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaa-----gagccgccc 86 |||| ||||||||||| || || || |||||||||||||||||||| |||| |||| Sbjct: 420 aaatcgtaacttgaaacaaaaaatagaaattttaagcaataataaaataaagagcggccc 479 Query: 87 gggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggg 146 ||||||||||||||||||||||| |||||||||||||||||| | ||||||| ||| ||| Sbjct: 480 gggttaataaaactgagaaaattgactcggaaagaaatttttggaaagctccattgtggg 539 Query: 147 attcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg 206 ||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||| Sbjct: 540 attcagacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcatagg 599 Query: 207 attttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnn 266 |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 600 attttattgaaaagaatcctaagacttcattgggtgggatggcggaacaaaccaaaaaaa 659 Query: 267 ttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcc 326 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 ttgccttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcc 719 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 720 cgcgaaatctttattgaattagaatactttcccgcgattcaataagagt-cgaataagga 778 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 779 gatttttttttaagaaagattac---attatctataaatatagaatatagataaatagac 835 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 836 acacacatctagatatattctagatcttctttcttgactatatatt 881
>gb|U54744.1|PPU54744 Phyllostachys pubescens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1072 Score = 519 bits (262), Expect = e-144 Identities = 415/466 (89%), Gaps = 13/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaa-----gagccgccc 86 |||| ||||||||||| || || || |||||||||||||||||||| |||| |||| Sbjct: 397 aaatcgtaacttgaaacaaaaaatagaaattttaagcaataataaaataaagagcggccc 456 Query: 87 gggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggg 146 ||||||||||||||||||||||| |||||||||||||||||| | ||||||| ||| ||| Sbjct: 457 gggttaataaaactgagaaaattgactcggaaagaaatttttggaaagctccattgtggg 516 Query: 147 attcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg 206 ||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||| Sbjct: 517 attcagacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcatagg 576 Query: 207 attttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnn 266 |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 577 attttattgaaaagaatcctaagacttcattgggtgggatggcggaacaaaccaaaaaaa 636 Query: 267 ttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcc 326 ||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 ttgccttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcc 696 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 697 cgcgaaatctttattgaattagaatactttcccgcgattcaataagagt-cgaataagga 755 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 756 gatttttttttaagaaagattac---attatctataaatatagaatatagataaatagac 812 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 813 acacacatctagatatattctagatcttctttcttgactatatatt 858
>gb|AY912191.1| Aulonemia patula ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1186 Score = 513 bits (259), Expect = e-142 Identities = 413/466 (88%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||||| |||| ||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 367 aaatcgtaactcgaaacaagaaatacaaattttaagcaataataaagagcggcccgggtt 426 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 || ||||||||||||||| |||||||||||| |||||||||||||| ||| || ||||| Sbjct: 427 aagaaaactgagaaaattggctcggaaagaaactttttggaagctccattgtggaattca 486 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| || |||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 487 gacctaaccattaaaagagaagtagtgggaacgacagaacctatgactgcataggatttt 546 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| ||||||||||||||||||||||||||| || ||| | Sbjct: 547 attgaaaagaatcctaatacttcattgggtgggatggcggaacaanccaaaaaaattgcc 606 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 607 ttatttggtaaggttataatataaattagcaaataaggcaggaaagagtaaatattcgcc 666 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 667 cgcgaaatctttattgaattagaattctttcccgcgattcaataagagtaaaaataagga 726 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| || Sbjct: 727 gatttttttttaagaaagattac---attatctataaatatagaatatagataaatagcc 783 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 784 acacacatctagatatattctagatcttctttcttgactatatatt 829
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 511 bits (258), Expect = e-142 Identities = 329/355 (92%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| || |||||| ||||||||||||||||| ||||||||| Sbjct: 422 aaatcgtaacttgaaacaagaaataaaaatttaaagcaataataaagagcggcccgggtt 481 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 482 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcgggattca 541 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 542 gacctaaccattaaaggagaagcagtgggaacgacagaacctatgactgcataggatttt 601 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 |||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 602 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaatagct 661 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ttatttggtaaggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcga 721 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 aatctttattggattagaatactttaccgcgattcaataagagtaaaaataagga 776 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 430 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 819 tagataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 877
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 486 bits (245), Expect = e-134 Identities = 313/338 (92%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| || |||||||||||||||||||||||| ||||||||| Sbjct: 420 aaatcgtaacttgaaacaagaaataaaaattttaagcaataataaagagcggcccgggtt 479 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 ||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 480 aataaaactgataaaattgactcggaaagaaattttttggaagctccattgcgggattca 539 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 540 aacctaaccattaaaggagaagcagtgggaacgacagaacctatgactgcataggatttt 599 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 600 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattggc 659 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 ttatttggtaaggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcga 719 Query: 332 aattcttattgaattagaatactttaccgcgattcaat 369 ||| ||||||||||||||||||||||||||||||||| Sbjct: 720 aatctttattgaattagaatactttaccgcgattcaat 757 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| ||||||||||| || |||||||||||||||||| | Sbjct: 813 taaatatagaatatagataaataaacacacacatctagacatattctagatcttctttct 872 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 873 tgactatatatt 884
>gb|AY912201.1| Cathariostachys capitata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1202 Score = 474 bits (239), Expect = e-130 Identities = 408/466 (87%), Gaps = 12/466 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| | ||||||| ||||||||||||||||| ||||||||| Sbjct: 397 aaatcgtaacttgaaacaagaaatccaaatttaaagcaataataaagagcggcccgggtt 456 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||| ||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 457 aataaacctgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 516 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||| ||||| ||||||||| |||||||||||||||||||||| | ||||||||||| Sbjct: 517 gacctatccattaaaggagaagtagtgggaacgacagaacctatgcctgcataggatttt 576 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| ||||||||||||||||||||||||||| || ||| | Sbjct: 577 attgaaaagaatcctaatacttcattgggtgggatggcggaacaanccaaaataattgcc 636 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 ||||||| |||| | |||| |||||||||| |||||||| |||||| ||||||||| Sbjct: 637 ttatttgataaggttatgatatagattaacaaatgagacaggagagagtagatattcgcc 696 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 697 cgcgaaatctttattgaattagaatacttgcccgcgattcaatcagagtaaaaataagga 756 Query: 387 tatttttt----agaaggactacattattatctataaatatagaatttagataaatatcc 442 ||||||| |||| || ||| |||||||||||||||||||| |||||||||| | Sbjct: 757 gattttttgttaagaaagattac---attatctataaatatagaatatagataaatagac 813 Query: 443 acacacatctggatatattctagatcttcttttttgactatatatt 488 ||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 814 ccacacatctagatatattctagatcttctttcttgactatatatt 859
>gb|AY912210.1| Nastus productus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1067 Score = 472 bits (238), Expect = e-130 Identities = 327/359 (91%), Gaps = 5/359 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||| ||||||||| || |||||||||||||| |||| |||| Sbjct: 393 aaatcgtaacttgaaacaagaaatacaaatttaaaacaataataaagagcggcccaggtt 452 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 453 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtgggattca 512 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||| |||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 513 gacctaatcattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 572 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 573 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 632 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 692 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagg 385 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 cgcgaaatctttattgaattagaatactttaccgcgattcaataagagtaaaaataagg 751 Score = 119 bits (60), Expect = 9e-24 Identities = 75/80 (93%) Strand = Plus / Plus Query: 409 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 468 |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| Sbjct: 778 attatctataaatatagaatatagataaatagacacacacatctagatatattctagatc 837 Query: 469 ttcttttttgactatatatt 488 |||||| ||||||||||||| Sbjct: 838 ttctttcttgactatatatt 857
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 468 bits (236), Expect = e-129 Identities = 396/449 (88%), Gaps = 17/449 (3%) Strand = Plus / Plus Query: 37 gtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataa 96 ||||||||||| |||||||| |||||| |||||||||||||||||| || ||||||||| Sbjct: 379 gtaacttgaaacaagaactagaaatttaaagcaataataaagagccatcctggttaataa 438 Query: 97 aactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacct 156 ||||||||||||||||| |||||||||||||||||||||||| ||| || |||||||||| Sbjct: 439 aactgagaaaattaactgggaaagaaattttttggaagctccattgtggaattcagacct 498 Query: 157 aaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattga 216 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 aaccattcaaggagaggcagtgggaacgacagaacctatgattccataggattttattga 558 Query: 217 aaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatt 276 |||||||||||| |||||||||||| ||||||||||||||||| || ||||||| Sbjct: 559 aaagaatcctaatacttcattgggtaggatggcggaacaaaccaaaaaaattttcttatt 618 Query: 277 tggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattc 336 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 619 tggtaaggttataaattaacaaataagacagaaaagagtaaatattcgcccgcgaaatcc 678 Query: 337 ttattgaattagaatactttaccgcga------ttcaataagagtaaaaataaggatatt 390 || | ||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct: 679 ttttaaaattagaatactttaccattaccattattcaataagagtaaaaataaagatatt 738 Query: 391 ttttagaaggactacattattatctataa-atatagaatttagataa-atatccacacac 448 || |||| |||| | ||||||| ||||||||||||||||| ||| ||||||| Sbjct: 739 tt----aagg-----attactctctataaaatatagaatttagataatatagacacacac 789 Query: 449 atctggatatattctagatcttctttttt 477 |||| |||||||||||||||||||||||| Sbjct: 790 atctagatatattctagatcttctttttt 818 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/71 (90%), Gaps = 4/71 (5%) Strand = Plus / Plus Query: 418 aaatatagaatttagataa-atatccacacacatctggatatattctagatcttcttttt 476 ||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct: 758 aaatatagaatttagataatatagacacacacatctagatatattctagatcttcttttt 817 Query: 477 t---gactata 484 | ||||||| Sbjct: 818 ttttgactata 828
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 464 bits (234), Expect = e-127 Identities = 286/303 (94%), Gaps = 2/303 (0%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 334 aaatcgtaacttgaaacaagaactacaaatttaaagcaataataaagagccgcccgggtt 393 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 394 aataaaactgagaaaattaactcggaaagaaattttttggaagctccattgcgggattca 453 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 454 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgactccataggatttt 513 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 514 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtc 573 Query: 272 ttatttggtaagtttataaattaacaaataagacagg-aaagagtaaatattcgcccgcg 330 |||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 574 ttatttggtaaggttataaattaacaaaaaagacaggaaaagagt-aatattcgcccgcg 632 Query: 331 aaa 333 ||| Sbjct: 633 aaa 635 Score = 89.7 bits (45), Expect = 8e-15 Identities = 96/111 (86%), Gaps = 9/111 (8%) Strand = Plus / Plus Query: 347 agaatactttaccgcgattcaataagagtaaaaataaggatatttttt-----agaagga 401 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 635 agaatactttaccgcgattcaataagagtaaaaataaggagattttttttttaagaagga 694 Query: 402 ctacattattatctataaatatagaatttagataaatatccacacacatct 452 ||| |||||||||||| ||||||| ||||||||| ||||||||||| Sbjct: 695 ttac---attatctataaa-atagaatatagataaatggacacacacatct 741
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 462 bits (233), Expect = e-127 Identities = 328/362 (90%), Gaps = 5/362 (1%) Strand = Plus / Plus Query: 38 taacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaa 97 |||||||||| ||||| ||||||||| || |||||| ||||||| | ||||||||||||| Sbjct: 428 taacttgaaacaagaaatacaaatttaaaacaataacaaagagcggaccgggttaataaa 487 Query: 98 actgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagaccta 157 |||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||| Sbjct: 488 actgagaaaattgactcggaaagaaatttattggaagctccattgtgggattcagaccta 547 Query: 158 accattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaa 217 | |||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 548 atcattaaaggagaagtagtgggaacgacagaacctatgactgcataggattttattgaa 607 Query: 218 aagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttattt 277 ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 608 aagaatcctaatacttcattgggtgggatggcggaacaaaccaaaagaattgccttattt 667 Query: 278 ggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaa 332 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 ggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaa 727 Query: 333 attcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggatatttt 392 || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 728 atctttattgaattagaatactttaccgcgattcaataagagtaaaaataaggagatttt 787 Query: 393 tt 394 || Sbjct: 788 tt 789
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 446 bits (225), Expect = e-122 Identities = 311/342 (90%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| ||||||||| ||||| ||||||||||||||||| | ||||||| Sbjct: 421 aaatcgtaacttgaaacaagaactactaatttaaagcaataataaagagcggtccgggtt 480 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 | |||||||||||||||| ||||||||| | |||||||||||||||| |||||||||| | Sbjct: 481 attaaaactgagaaaatttactcggaaatatattttttggaagctccattgcgggattga 540 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| || ||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 541 gacctaaccattaaaagagaagcagtgggaacgacagaacccatgactccataggatttt 600 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||| ||||||||||||||||||| ||| | Sbjct: 601 attgaaaagaatcctaatacttcattggatgggatggcggaacaaaccaaaaaaattgcc 660 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 720 Query: 332 aattcttattgaattagaatactttaccgcgattcaataaga 373 ||| |||||||||||||||||||||| | | ||||||||||| Sbjct: 721 aatccttattgaattagaatactttaacccaattcaataaga 762 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 416 ataaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt 475 ||||||||||||| | |||||||| |||| |||| | ||||||||||| ||||||||| Sbjct: 805 ataaatatagaatatggataaatagacacaaacatttagatatattctaaatcttctttc 864 Query: 476 ttgactatatatt 488 ||||||||||||| Sbjct: 865 ttgactatatatt 877
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 444 bits (224), Expect = e-121 Identities = 316/349 (90%) Strand = Plus / Plus Query: 38 taacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaa 97 |||||||||| || || || |||||| ||| ||||||||||||| ||||||||||||||| Sbjct: 398 taacttgaaacaataaataaaaatttaaagaaataataaagagcagcccgggttaataaa 457 Query: 98 actgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagaccta 157 |||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 458 actgagaaaattgactcggaaagaaattttttggaagctccattgcaggattcaaaccta 517 Query: 158 accattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaa 217 |||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| ||||| Sbjct: 518 accattaaaggagaagctgtgggaacgacaaaacctatgactgcataggattttcttgaa 577 Query: 218 aagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttattt 277 ||||||||||| |||||||||||||||||||||||||||||| ||| |||||| Sbjct: 578 aagaatcctaatacttcattgggtgggatggcggaacaaacccccaaaattgctttattt 637 Query: 278 ggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattct 337 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 638 ggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatctt 697 Query: 338 tattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 ||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 698 tattggattagaatactttaccatgattcaataagagtaaaaataagga 746
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 442 bits (223), Expect = e-121 Identities = 312/344 (90%), Gaps = 5/344 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||||| |||| ||||| ||||||||| ||||||||||||||||| ||||||||| Sbjct: 415 aaatcgtaactcgaaacaagaaatacaaatttgaagcaataataaagagcggcccgggtt 474 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| ||| |||||||||||||||||||||||| ||| || ||||| Sbjct: 475 aataaaactgagaaaattgacttggaaagaaattttttggaagctccattgtggaattca 534 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 535 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 594 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 595 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 654 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 714 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaata 370 |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 715 cgcgaaatctttattgaattagaatactttaccgcgattcaata 758 Score = 115 bits (58), Expect = 1e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 411 tatctataaatatagaatttagataaatatccacacacatctggatatattctagatctt 470 |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 757 tatctataaatatagaatatagataaatagacacacacatctagatatattctagatctt 816 Query: 471 cttttttgactatatatt 488 |||| ||||||||||||| Sbjct: 817 ctttcttgactatatatt 834
>gb|U54749.1|OAU54749 Otatea acuminata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1025 Score = 442 bits (223), Expect = e-121 Identities = 312/344 (90%), Gaps = 5/344 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||||| |||| ||||| ||||||||| ||||||||||||||||| ||||||||| Sbjct: 392 aaatcgtaactcgaaacaagaaatacaaatttgaagcaataataaagagcggcccgggtt 451 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| ||| |||||||||||||||||||||||| ||| || ||||| Sbjct: 452 aataaaactgagaaaattgacttggaaagaaattttttggaagctccattgtggaattca 511 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 512 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 571 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 572 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 631 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ttatttggtaaggttataatataaattaacaaataagacaggaaagagtaaatattcgcc 691 Query: 327 cgcgaaattcttattgaattagaatactttaccgcgattcaata 370 |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 692 cgcgaaatctttattgaattagaatactttaccgcgattcaata 735 Score = 115 bits (58), Expect = 1e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 411 tatctataaatatagaatttagataaatatccacacacatctggatatattctagatctt 470 |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 734 tatctataaatatagaatatagataaatagacacacacatctagatatattctagatctt 793 Query: 471 cttttttgactatatatt 488 |||| ||||||||||||| Sbjct: 794 ctttcttgactatatatt 811
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 438 bits (221), Expect = e-120 Identities = 292/318 (91%) Strand = Plus / Plus Query: 69 aataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttt 128 |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 474 aataataaggagcagcccgggttaataaaactgagaaaattgactcggaaagaaattttt 533 Query: 129 tggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacag 188 |||||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| Sbjct: 534 tggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaa 593 Query: 189 aacctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatgg 248 ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 594 aacctatgactacataggattttattgaaaagaatcctaatacttcattgggtgggatgg 653 Query: 249 cggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacagg 308 ||||||||||| ||| |||||||||||| |||||||||||||||||||||||| Sbjct: 654 cggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataagacagg 713 Query: 309 aaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaa 368 |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| Sbjct: 714 aaagagtaaatattcgcccgcgaaatctttattggattagaatactttaccacgattcaa 773 Query: 369 taagagtaaaaataagga 386 |||||||||||||||||| Sbjct: 774 taagagtaaaaataagga 791 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| ||||||||||||| Sbjct: 839 tggatatattctagatcttctttcttgactatatatt 875
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 432 bits (218), Expect = e-118 Identities = 292/319 (91%) Strand = Plus / Plus Query: 65 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 |||||||||||| |||| || ||||||||||||||||||||||| |||||||||||||| Sbjct: 459 aagcaataataaggagcaaccggggttaataaaactgagaaaattgactcggaaagaaat 518 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 519 tttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacg 578 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 ||| ||||||||| | |||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 579 acaaaacctatgactgcataggattttattcaaaagaatcctaatacttcattgggtggg 638 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 304 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 639 atggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataaga 698 Query: 305 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 364 |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| Sbjct: 699 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatactttaccacgat 758 Query: 365 tcaataagagtaaaaataa 383 ||||||||||||||||||| Sbjct: 759 tcaataagagtaaaaataa 777 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 455 atatattctagatcttcttttttgactatatatt 488 |||||||||||||||||||| ||||||||||||| Sbjct: 830 atatattctagatcttctttcttgactatatatt 863
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 2122 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 2181 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 2182 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 2240 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 2241 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 2300 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2301 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 2360 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2361 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 2420 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 2421 gaattagaatactttaccgcgattcaataagagtaaaa 2458
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 2122 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 2181 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 2182 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 2240 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 2241 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 2300 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2301 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 2360 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2361 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 2420 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 2421 gaattagaatactttaccgcgattcaataagagtaaaa 2458
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78792 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78733 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78732 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78674 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78673 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78614 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78613 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78554 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78553 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78494 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 78493 gaattagaatactttaccgcgattcaataagagtaaaa 78456 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78414 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78355 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 78354 tgactatatatt 78343
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78792 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78733 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78732 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78674 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78673 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78614 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78613 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78554 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78553 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78494 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 78493 gaattagaatactttaccgcgattcaataagagtaaaa 78456 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78414 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78355 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 78354 tgactatatatt 78343
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78735 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78676 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78675 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78617 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78616 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78557 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78556 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78497 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78496 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78437 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 78436 gaattagaatactttaccgcgattcaataagagtaaaa 78399 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78358 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78299 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 78298 tgactatatatt 78287
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 54798 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 54739 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 54738 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 54680 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 54679 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 54620 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 54619 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 54560 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 54559 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 54500 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 54499 gaattagaatactttaccgcgattcaataagagtaaaa 54462 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 54425 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 54366 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 54365 tgactatatatt 54354
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 127626 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 127567 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 127566 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 127508 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 127507 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 127448 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 127447 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 127388 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 127387 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 127328 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 127327 gaattagaatactttaccgcgattcaataagagtaaaa 127290 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 127253 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 127194 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 127193 tgactatatatt 127182
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78780 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78721 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78720 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78662 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78661 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78602 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78601 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78542 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78541 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78482 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 78481 gaattagaatactttaccgcgattcaataagagtaaaa 78444 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78402 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78343 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 78342 tgactatatatt 78331
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 71962 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 72021 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 72022 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 72080 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 72081 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 72140 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 72141 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 72200 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 72201 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 72260 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 72261 gaattagaatactttaccgcgattcaataagagtaaaa 72298 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 72338 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 72397 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 72398 tgactatatatt 72409
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 76974 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 76915 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 76914 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 76856 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 76855 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 76796 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 76795 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 76736 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 76735 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 76676 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 76675 gaattagaatactttaccgcgattcaataagagtaaaa 76638 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 76603 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 76544 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 76543 tgactatatatt 76532
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 11038 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 10979 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 10978 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 10920 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 10919 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 10860 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 10859 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 10800 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10799 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 10740 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 10739 gaattagaatactttaccgcgattcaataagagtaaaa 10702 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10667 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10608 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 10607 tgactatatatt 10596
>gb|DQ289153.1| Oryza glumipatula F ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1110 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 424 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 483 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 484 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 542 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 543 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 602 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 603 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 662 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 663 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 722 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 723 gaattagaatactttaccgcgattcaataagagtaaaa 760 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 798 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 857 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 858 tgactatatatt 869
>gb|DQ289152.1| Oryza glumipatula E ribosomal protein L16 (ribosomal protein L16) gene, partial cds; chloroplast Length = 1109 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 423 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 482 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 483 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 541 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 542 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 601 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 602 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 661 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 662 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 721 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 722 gaattagaatactttaccgcgattcaataagagtaaaa 759 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 797 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 856 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 857 tgactatatatt 868
>gb|DQ289151.1| Oryza meridionalis D ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1112 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 423 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 482 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 483 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 541 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 542 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 601 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 602 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 661 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 662 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 721 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 722 gaattagaatactttaccgcgattcaataagagtaaaa 759 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 800 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 859 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 860 tgactatatatt 871
>gb|DQ289150.1| Oryza barthii C ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1106 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 422 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 481 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 482 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 540 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 541 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 600 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 601 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 660 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 661 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 720 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 721 gaattagaatactttaccgcgattcaataagagtaaaa 758 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 794 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 853 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 854 tgactatatatt 865
>gb|DQ289148.1| Oryza sativa A ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1113 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 423 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 482 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 483 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 541 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 542 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 601 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 602 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 661 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 662 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 721 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 722 gaattagaatactttaccgcgattcaataagagtaaaa 759 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 801 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 860 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 861 tgactatatatt 872
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 9190889 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 9190948 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 9190949 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 9191007 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 9191008 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 9191067 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 9191068 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 9191127 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9191128 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 9191187 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 9191188 gaattagaatactttaccgcgattcaataagagtaaaa 9191225 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 9113936 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 9113995 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 9113996 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 9114054 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 9114055 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 9114114 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 9114115 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 9114174 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9114175 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 9114234 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 9114235 gaattagaatactttaccgcgattcaataagagtaaaa 9114272 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9191265 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9191324 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 9191325 tgactatatatt 9191336 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9114312 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9114371 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 9114372 tgactatatatt 9114383
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 10370582 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 10370523 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 10370522 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 10370464 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 10370463 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 10370404 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 10370403 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 10370344 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10370343 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 10370284 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 10370283 gaattagaatactttaccgcgattcaataagagtaaaa 10370246 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10370211 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10370152 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 10370151 tgactatatatt 10370140
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 14454907 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 14454966 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 14454967 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 14455025 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 14455026 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 14455085 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 14455086 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 14455145 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14455146 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 14455205 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 14455206 gaattagaatactttaccgcgattcaataagagtaaaa 14455243 Score = 226 bits (114), Expect = 5e-56 Identities = 193/218 (88%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 11895112 ttgaaacaagaaatacaaatttcaaggaataacaaagagtgtcccgagttaataaaactg 11895171 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || ||| |||||||||||||||||||||||| ||| | |||| | ||||||||| Sbjct: 11895172 agaaa-ttgacttggaaagaaattttttggaagctccattgtgagattaaaacctaacca 11895230 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || |||||||||| |||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 11895231 ttaaaggagaagccgtgggaacgacagaacctatgactggataggattttcttgaaaaga 11895290 Query: 222 atcctaacacttcattgggtgggatggcggaacaaacc 259 |||| || |||||||||||||||||||||||||||||| Sbjct: 11895291 atcccaatacttcattgggtgggatggcggaacaaacc 11895328 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 293 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 352 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11895349 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 11895408 Query: 353 ctttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||| Sbjct: 11895409 ctttaccgcgattcaataagagtaaaa 11895435 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 14455279 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 14455338 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 14455339 tgactatatatt 14455350 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 11895468 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 11895527 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 11895528 tgactatatatt 11895539
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 9258277 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 9258336 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 9258337 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 9258395 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 9258396 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 9258455 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 9258456 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 9258515 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9258516 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 9258575 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 9258576 gaattagaatactttaccgcgattcaataagagtaaaa 9258613 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 9258647 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 9258706 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 9258707 tgactatatatt 9258718
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 12757339 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 12757280 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 12757279 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 12757221 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 12757220 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 12757161 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 12757160 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 12757101 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 12757100 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 12757041 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 12757040 gaattagaatactttaccgcgattcaataagagtaaaa 12757003 Score = 369 bits (186), Expect = 6e-99 Identities = 302/339 (89%), Gaps = 3/339 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| || | ||||||||| ||| Sbjct: 19544245 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcctgagttaataaa-ctg 19544303 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 19544304 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 19544362 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || |||||||||||||||||| |||||||||||||| | |||||||||| ||||||| | Sbjct: 19544363 ttaaaggagaagcagtgggaatgacagaacctatgactggataggattttcttgaaaaaa 19544422 Query: 222 atcctaacacttcattgggtgggatggcggaacaaacc-nnnnnnnttgtcttatttggt 280 |||| || |||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 19544423 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaaattgtcttatttgat 19544482 Query: 281 aagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttat 340 ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 19544483 aaggttatgaattaacaaataagacatgaaagagtaaatattcgcccgcgaaatttttat 19544542 Query: 341 tgaattagaatactttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||||||||||||||| Sbjct: 19544543 tgaattagaatactttaccgcgattcaataagagtaaaa 19544581 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 12756966 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 12756907 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 12756906 tgactatatatt 12756895 Score = 81.8 bits (41), Expect = 2e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 475 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 19544614 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 19544673 Query: 476 ttgactatatatt 488 ||||||||||||| Sbjct: 19544674 ttgactatatatt 19544686
>gb|AF133458.1|AF133458 Leersia virginica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1209 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||||||||| ||||||| |||||||||||||||||| Sbjct: 411 ttgaaacaagaaatacaaatttcaagcaataacaaagagcgtcccgggttaataaaactg 470 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 471 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 529 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||| | Sbjct: 530 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaaa 589 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 ||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 590 gtcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 649 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 650 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 709 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 710 gaattagaatactttaccgcgattcaataagagtaaaa 747 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 409 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 468 |||||||||||||||||||| |||||||||| || |||||||| ||||||||||||||| Sbjct: 787 attatctataaatatagaatatagataaataaacatacacatctagatatattctagatc 846 Query: 469 ttcttttttgactatatatt 488 |||||| ||||||||||||| Sbjct: 847 ttctttcttgactatatatt 866
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 69490 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 69549 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 69550 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 69608 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 69609 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 69668 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 69669 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 69728 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 69729 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 69788 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 69789 gaattagaatactttaccgcgattcaataagagtaaaa 69826 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 69860 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 69919 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 69920 tgactatatatt 69931
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 146710 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 146769 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 146770 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 146828 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 146829 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 146888 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 146889 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 146948 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 146949 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 147008 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 147009 gaattagaatactttaccgcgattcaataagagtaaaa 147046 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 147082 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 147141 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 147142 tgactatatatt 147153
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 54472 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 54531 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 54532 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 54590 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 54591 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 54650 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 54651 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 54710 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 54711 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 54770 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 54771 gaattagaatactttaccgcgattcaataagagtaaaa 54808 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 54844 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 54903 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 54904 tgactatatatt 54915
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 2124 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 2183 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 2184 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 2242 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 2243 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 2302 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2303 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 2362 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2363 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 2422 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 2423 gaattagaatactttaccgcgattcaataagagtaaaa 2460
>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full insert sequence Length = 1764 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 155 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 214 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 215 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 273 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 274 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 333 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 334 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 393 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 394 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 453 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 454 gaattagaatactttaccgcgattcaataagagtaaaa 491 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||| ||| || |||||||| ||||||||||||||| ||||| | Sbjct: 534 taaatatagaatatagatagataaacatacacatctagatatattctagatcctctttct 593 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 594 tgactatatatt 605
>dbj|AK059459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C07, full insert sequence Length = 352 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 1 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 60 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 61 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 119 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 120 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 179 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 180 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 239 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 240 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 299 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 300 gaattagaatactttaccgcgattcaataagagtaaaa 337
>gb|DQ289149.1| Oryza sativa ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1103 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 422 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 481 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 482 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 540 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 541 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 600 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 601 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 660 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 661 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 720 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 721 gaattagaatactttaccgcgattcaataagagtaaaa 758 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 791 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 850 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 851 tgactatatatt 862
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 10376621 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 10376562 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 10376561 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 10376503 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 10376502 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 10376443 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 10376442 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 10376383 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10376382 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 10376323 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 10376322 gaattagaatactttaccgcgattcaataagagtaaaa 10376285 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 10376250 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 10376191 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 10376190 tgactatatatt 10376179
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 78732 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 78673 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 78672 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 78614 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 78613 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 78554 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 78553 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 78494 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78493 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 78434 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 78433 gaattagaatactttaccgcgattcaataagagtaaaa 78396 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 78358 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 78299 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 78298 tgactatatatt 78287
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 428 bits (216), Expect = e-117 Identities = 315/349 (90%), Gaps = 1/349 (0%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||||||| Sbjct: 402 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcccgggtt 461 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 462 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 521 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 522 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 581 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 582 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgct 641 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 ttatttggtaaggttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 701 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 380 ||| ||||||| ||||||| |||||| | ||||||||||||| |||||| Sbjct: 702 aatccttattggattagaaaacttta-cacgattcaataagaataaaaa 749 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| || |||||||||| Sbjct: 802 tggatatattctagatcttctttctttactatatatt 838
>gb|DQ289157.1| Oryza punctata J ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1116 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 430 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 489 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 490 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 548 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 549 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 608 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 609 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 668 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 669 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 728 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 729 gaattagaatactttaccgcgattcaataagagtaaaa 766 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| | |||||||| ||||||||||||||| ||||| | Sbjct: 804 taaatatagaatatagataaataaagatacacatctagatatattctagatcctctttct 863 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 864 tgactatatatt 875
>gb|DQ289156.1| Oryza grandiglumis I ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 430 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 489 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 490 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 548 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 549 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 608 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 609 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 668 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 669 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 728 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 729 gaattagaatactttaccgcgattcaataagagtaaaa 766 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 805 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 864 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 865 tgactatatatt 876
>gb|DQ289155.1| Oryza latifolia H ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 429 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 488 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 489 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 547 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 548 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 607 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 608 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 667 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 668 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 727 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 728 gaattagaatactttaccgcgattcaataagagtaaaa 765 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 806 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 865 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 866 tgactatatatt 877
>gb|DQ289154.1| Oryza officinalis G ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 430 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 489 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 490 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 548 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 549 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 608 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 609 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 668 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 669 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 728 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 729 gaattagaatactttaccgcgattcaataagagtaaaa 766 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 806 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 865 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 866 tgactatatatt 877
>gb|AF133492.1|AF133492 Humbertochloa greenwayi ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1218 Score = 422 bits (213), Expect = e-115 Identities = 305/338 (90%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| |||||||| |||||||||| ||||||| ||||||||||||||||||| Sbjct: 432 ttgaaacaagaaatacaaattctaagcaataacaaagagcagcccgggttaataaaactg 491 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||||| ||||||||||| |||||||||||||||| ||||| |||||| ||||||||| Sbjct: 492 agaaaatggactcggaaagatattttttggaagctccattgcgagattcaaacctaacca 551 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || |||||||||| |||||||||||||||||||||| | |||||||||| ||||||| | Sbjct: 552 ttaaaggagaagctgtgggaacgacagaacctatgactggataggatttttttgaaaaca 611 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 ||||||| |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 612 atcctaatacttcattgggtgggatggcggaacaaaccaaaaaagttgccttatttgata 671 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 672 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatctttatt 731 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||| ||||||||||||||||||||||||||||| Sbjct: 732 gaattagagtactttaccgcgattcaataagagtaaaa 769 Score = 79.8 bits (40), Expect = 8e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| ||||||||||| ||||||||||||||| ||||| | Sbjct: 811 taaatatagaatatagataaataaacacacacatctagatatattctagatcgtctttct 870 Query: 477 tgactata 484 || ||||| Sbjct: 871 tggctata 878
>gb|AF133474.1|AF133474 Poa pratensis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1097 Score = 422 bits (213), Expect = e-115 Identities = 333/376 (88%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 12 taaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaat 71 ||||||||||||||||| | |||| ||||||||||| ||||||| |||||| ||||||| Sbjct: 408 taaaactaatagagaattagaaatcgtaacttgaaaaaagaactctaaatttaaagcaat 467 Query: 72 aataaaga-------gccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 |||||||| |||| |||| |||||||||||||||||||||||||||||||| || Sbjct: 468 aataaagaataaagagccgaccggattaataaaactgagaaaattaactcggaaagatat 527 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 ||||| |||||||| ||| || ||| |||||||||||||||||||||||||||||||| Sbjct: 528 ttttttgaagctccattgtggaattagaacctaaccattcaaggagaagcagtgggaacg 587 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 || |||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||| Sbjct: 588 acggaacctatgatttaataggattttatttaaaaaaatcctaatacttcattgggtggg 647 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 304 |||||||| |||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 648 atggcggagcaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataaga 707 Query: 305 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 364 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 708 caggaaagagtaaatattcgcccgcgaaatccttattgaattagaatactttaccattat 767 Query: 365 tcaataagagtaaaaa 380 |||||||||||||||| Sbjct: 768 tcaataagagtaaaaa 783
>dbj|AK104024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E05, full insert sequence Length = 485 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||| | ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 148 ttgaaacaaggaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 207 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 208 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 266 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 267 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 326 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 327 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 386 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 387 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 446 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 447 gaattagaatactttaccgcgattcaataagagtaaaa 484
>dbj|AK058501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F04, full insert sequence Length = 547 Score = 422 bits (213), Expect = e-115 Identities = 306/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| |||| |||||||| Sbjct: 196 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttagtaaaactg 255 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 256 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 314 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 315 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 374 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 375 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 434 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 435 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 494 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 495 gaattagaatactttaccgcgattcaataagagtaaaa 532
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 416 bits (210), Expect = e-113 Identities = 291/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 65 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 |||||||||||| |||| || ||||||||||||||||||||||| |||||||||||||| Sbjct: 428 aagcaataataaggagcaaccggggttaataaaactgagaaaattgactcggaaagaaat 487 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 488 tttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacg 547 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 ||| ||||||||| | |||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 548 acaaaacctatgactgcataggattttattcaaaagaatcctaatacttcattgggtggg 607 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 304 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 608 atggcggaacaaaccaaaaaaattgtcttatttggtaaggttataaattaacaaataaga 667 Query: 305 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 364 |||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 668 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatacttta-cacgat 726 Query: 365 tcaataagagtaaaaataa 383 ||||||||||||||||||| Sbjct: 727 tcaataagagtaaaaataa 745 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 455 atatattctagatcttcttttttgactatatatt 488 |||||||||||||||||||| ||||||||||||| Sbjct: 797 atatattctagatcttctttcttgactatatatt 830
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 414 bits (209), Expect = e-112 Identities = 305/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| || |||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 2030 ttgaaacaagaaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactg 2089 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 2090 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 2148 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 2149 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 2208 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2209 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 2268 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2269 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 2328 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 2329 gaattagaatactttaccgcgattcaataagagtaaaa 2366
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 414 bits (209), Expect = e-112 Identities = 305/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| || |||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 27924266 ttgaaacaagaaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactg 27924207 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 27924206 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 27924148 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 27924147 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 27924088 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 27924087 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 27924028 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 27924027 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 27923968 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 27923967 gaattagaatactttaccgcgattcaataagagtaaaa 27923930 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 27923897 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 27923838 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 27923837 tgactatatatt 27923826
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 414 bits (209), Expect = e-112 Identities = 305/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| || |||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 87624 ttgaaacaagaaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactg 87565 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 87564 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 87506 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 87505 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 87446 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 87445 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 87386 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 87385 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 87326 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 87325 gaattagaatactttaccgcgattcaataagagtaaaa 87288 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 87255 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 87196 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 87195 tgactatatatt 87184
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 414 bits (209), Expect = e-112 Identities = 305/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| || |||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 13600 ttgaaacaagaaataaaaatttcaaggaataacaaagagagtcccgagttaataaaactg 13541 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 13540 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 13482 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 13481 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 13422 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 13421 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 13362 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 13361 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 13302 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||||||||||| Sbjct: 13301 gaattagaatactttaccgcgattcaataagagtaaaa 13264 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 13231 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 13172 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 13171 tgactatatatt 13160
>gb|AY847084.1| Pennisetum setaceum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1016 Score = 408 bits (206), Expect = e-111 Identities = 316/355 (89%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || | |||||| ||| ||||| ||||||| ||||| || Sbjct: 393 aaatcgtaacttgaaataaaaaatcaaaatttaaagaaataaaaaagagcagcccgcgtc 452 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 453 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 512 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||||| ||||||||| ||| ||||||| Sbjct: 513 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgacgacatcggatttt 572 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 573 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgct 632 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 ttatttgataagattctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 692 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 ||| ||||||| |||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 693 aatccttattggattagaatactttaccacgattcaataagaataaaaataagga 747
>gb|DQ289158.1| Oryza australiensis k ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 406 bits (205), Expect = e-110 Identities = 304/338 (89%), Gaps = 1/338 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| |||| ||||||||||||| Sbjct: 433 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaactg 492 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 493 agaaa-ttgactcggaaagaaattttttggaagctccattgcgaaattcaaacctaacca 551 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 552 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 611 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 |||| || |||||||||||||||||||||||||||||| ||| |||||||| || Sbjct: 612 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttgata 671 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 672 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttatt 731 Query: 342 gaattagaatactttaccgcgattcaataagagtaaaa 379 |||||| ||||||||||||||||||||||||||||||| Sbjct: 732 gaattaaaatactttaccgcgattcaataagagtaaaa 769 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 805 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 864 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 865 tgactatatatt 876
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 406 bits (205), Expect = e-110 Identities = 291/322 (90%) Strand = Plus / Plus Query: 62 tttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaaga 121 ||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 458 tttaagcaataataaggagcaaccggggttaataaaactgagaaaattgactcggaaaga 517 Query: 122 aattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtggga 181 ||||||||||||||||| |||| | ||||| ||||||||||| |||||||||| |||||| Sbjct: 518 aattttttggaagctccattgcagaattcaaacctaaccattaaaggagaagctgtggga 577 Query: 182 acgacagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggt 241 |||||| ||||||||| | |||||||||||||||||||||||||||| |||||||||||| Sbjct: 578 acgacaaaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggt 637 Query: 242 gggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 301 |||||||||||||||||| ||| |||||||||||| ||||||||||||||||| Sbjct: 638 gggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaata 697 Query: 302 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 361 ||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| | Sbjct: 698 agacaggaaagagtaaatattcgcccgcgaaatctttattggattaagatactttaccac 757 Query: 362 gattcaataagagtaaaaataa 383 |||||||||||||||||||||| Sbjct: 758 gattcaataagagtaaaaataa 779 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 455 atatattctagatcttcttttttgactatatatt 488 |||||||||||||||||||| ||||||||||||| Sbjct: 834 atatattctagatcttctttcttgactatatatt 867
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 1650 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 1592 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 1591 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 1532 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 1531 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 1472 Query: 235 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 294 ||||||||||||||||||||||||| ||| ||||||| |||| || ||||||| Sbjct: 1471 attgggtgggatggcggaacaaaccaaaaaaattgctttatttgataaggttctaaatta 1412 Query: 295 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatact 354 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 1411 acaaataagacaggaaagagtaaatattcgcccgcgaaatccttattggattagaatact 1352 Query: 355 ttaccgcgattcaataagagtaaaaataagga 386 ||||| ||||||||||||| |||||| ||||| Sbjct: 1351 ttaccacgattcaataagaataaaaaaaagga 1320 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 454 gatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||| ||||||||||||| Sbjct: 1273 gatatattctagatcttctttcttgactatatatt 1239
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 81207 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 81149 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 81148 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 81089 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81088 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 81029 Query: 235 attgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatta 294 ||||||||||||||||||||||||| ||| ||||||| |||| || ||||||| Sbjct: 81028 attgggtgggatggcggaacaaaccaaaaaaattgctttatttgataaggttctaaatta 80969 Query: 295 acaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatact 354 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80968 acaaataagacaggaaagagtaaatattcgcccgcgaaatccttattggattagaatact 80909 Query: 355 ttaccgcgattcaataagagtaaaaataagga 386 ||||| ||||||||||||| |||||| ||||| Sbjct: 80908 ttaccacgattcaataagaataaaaaaaagga 80877 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 454 gatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||| ||||||||||||| Sbjct: 80830 gatatattctagatcttctttcttgactatatatt 80796
>gb|AY847095.1| Megastachya mucronata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1154 Score = 400 bits (202), Expect = e-108 Identities = 316/355 (89%), Gaps = 1/355 (0%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||| ||| || || || |||||| ||||||||| ||||||| ||| || || Sbjct: 395 aaatcgtaacttcaaacaataaataaaaatttaaagcaataaaaaagagcagccgggatt 454 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 455 aataaaactgagaaaattgactcggaaataaattttttggaagctccattgcaggattca 514 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 515 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 574 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 575 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtt 634 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 ttatttggtaaggttttaaattaacaaataagacaggaaagagtaaatattcgcccgcga 694 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 ||| |||||| |||||||||||||| | ||||||||||||| |||||| ||||| Sbjct: 695 aatctttattggattagaatacttta-cacgattcaataagaataaaaaaaagga 748 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactat 483 |||||||||||| |||||||||| |||||||| Sbjct: 788 tggatatattctggatcttctttcttgactat 819
>gb|AF133462.1|AF133462 Pariana radiciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1262 Score = 400 bits (202), Expect = e-108 Identities = 341/386 (88%), Gaps = 8/386 (2%) Strand = Plus / Plus Query: 13 aaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaata 72 |||| ||||||||||| |||| ||||||||||| ||||| ||||||||| |||||||| Sbjct: 406 aaaaataatagagaatttgaaatcgtaacttgaaacaagaaatacaaatttgaagcaata 465 Query: 73 ataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgga 132 ||||||||| || |||||||| ||||||||||||||| |||||||||||||||||||| | Sbjct: 466 ataaagagcagctcgggttaaaaaaactgagaaaattgactcggaaagaaattttttgaa 525 Query: 133 agctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacc 192 |||||| ||| |||||||||||||||||||| ||||||||| ||||||||||| ||| || Sbjct: 526 agctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgatagagcc 585 Query: 193 tatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgga 252 ||||| | ||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| Sbjct: 586 tatgactgcataggatttttttggaaagaattctaatacttcattgggtgggatggcgga 645 Query: 253 acaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaag 312 ||||||| ||| |||||| |||| |||||||||||||||||||||||||||| Sbjct: 646 acaaaccaaaaaaattgncttatt---taaggttataaattaacaaataagacaggaaag 702 Query: 313 agtaaatattcgcccgcgaaattcttatt--gaatt--agaatactttaccgcgattcaa 368 |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| Sbjct: 703 agtaaatattcgcccgcgaaatccttattaagaattaaagaatactttaccgcgattcaa 762 Query: 369 taagagtaaaaataaggatatttttt 394 ||||||| ||||||||| ||||||| Sbjct: 763 taagagt-caaataaggagatttttt 787 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 408 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 467 ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||| Sbjct: 807 tattatctataaatatagaatatagataaatagacacagacatctagatatattctagat 866 Query: 468 cttcttttttgactatatatt 488 ||||||| ||||||||||||| Sbjct: 867 cttctttcttgactatatatt 887
>gb|U54750.1|RPU54750 Rhipidocladum pittieri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1010 Score = 400 bits (202), Expect = e-108 Identities = 297/331 (89%), Gaps = 5/331 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||||| |||| ||||| || |||||||||||||||||||||||| || ||||| Sbjct: 396 aaatcgtaactcgaaacaagaaatagaaattttaagcaataataaagagcgtccggggtt 455 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| ||| || ||||| Sbjct: 456 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgtggaattca 515 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||| Sbjct: 516 gacctaaccattaaaggagaagtagtgggaacgacagaacctatgactgcataggatttt 575 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| ||| | Sbjct: 576 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgcc 635 Query: 272 ttatttggtaagtt-----tataaattaacaaataagacaggaaagagtaaatattcgcc 326 |||||||||||| | |||||||||||||||||| |||||||||||||||||||||| Sbjct: 636 ttatttggtaaggttataatataaattaacaaataaggcaggaaagagtaaatattcgcc 695 Query: 327 cgcgaaattcttattgaattagaatacttta 357 |||||||| ||||||||||||||||||||| Sbjct: 696 cgcgaaatctttattgaattagaatacttta 726 Score = 103 bits (52), Expect = 5e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 725 taaatatagaatatagataaatagacacacacatctagatatattctagatcttctttct 784 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 785 tgactatatatt 796
>gb|U54740.1|PRU54740 Pariana radiciflora ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1102 Score = 400 bits (202), Expect = e-108 Identities = 341/386 (88%), Gaps = 8/386 (2%) Strand = Plus / Plus Query: 13 aaaactaatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaata 72 |||| ||||||||||| |||| ||||||||||| ||||| ||||||||| |||||||| Sbjct: 383 aaaaataatagagaatttgaaatcgtaacttgaaacaagaaatacaaatttgaagcaata 442 Query: 73 ataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgga 132 ||||||||| || |||||||| ||||||||||||||| |||||||||||||||||||| | Sbjct: 443 ataaagagcagctcgggttaaaaaaactgagaaaattgactcggaaagaaattttttgaa 502 Query: 133 agctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacc 192 |||||| ||| |||||||||||||||||||| ||||||||| ||||||||||| ||| || Sbjct: 503 agctccattgtgggattcagacctaaccattaaaggagaagtagtgggaacgatagagcc 562 Query: 193 tatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgga 252 ||||| | ||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| Sbjct: 563 tatgactgcataggatttttttggaaagaattctaatacttcattgggtgggatggcgga 622 Query: 253 acaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaag 312 ||||||| ||| |||||| |||| |||||||||||||||||||||||||||| Sbjct: 623 acaaaccaaaaaaattgncttatt---taaggttataaattaacaaataagacaggaaag 679 Query: 313 agtaaatattcgcccgcgaaattcttatt--gaatt--agaatactttaccgcgattcaa 368 |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| Sbjct: 680 agtaaatattcgcccgcgaaatccttattaagaattaaagaatactttaccgcgattcaa 739 Query: 369 taagagtaaaaataaggatatttttt 394 ||||||| ||||||||| ||||||| Sbjct: 740 taagagt-caaataaggagatttttt 764 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 408 tattatctataaatatagaatttagataaatatccacacacatctggatatattctagat 467 ||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||| Sbjct: 784 tattatctataaatatagaatatagataaatagacacagacatctagatatattctagat 843 Query: 468 cttcttttttgactatatatt 488 ||||||| ||||||||||||| Sbjct: 844 cttctttcttgactatatatt 864
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 398 bits (201), Expect = e-108 Identities = 297/330 (90%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 50 agaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatt 109 |||| ||||||||| ||| ||||| ||||||| |||| |||||||||| ||||||| || Sbjct: 23180333 agaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaagtgagaaa-tt 23180391 Query: 110 aactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagga 169 |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||| Sbjct: 23180392 gactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaagga 23180451 Query: 170 gaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaac 229 |||||||||||||||||||||||||| | | |||||||||| ||||||||||||| || Sbjct: 23180452 gaagcagtgggaacgacagaacctattactggataggattttcttgaaaagaatcccaat 23180511 Query: 230 acttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 289 |||||||||||||||||||||||||||||| |||||||||| | |||| |||| Sbjct: 23180512 acttcattgggtgggatggcggaacaaaccaaaaaaattgtcttattcgataaggttatg 23180571 Query: 290 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 349 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 23180572 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattaga 23180631 Query: 350 atactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||| Sbjct: 23180632 atactttaccgcgattcaataagagtaaaa 23180661 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 23180694 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 23180753 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 23180754 tgactatatatt 23180765
>gb|AF133459.1|AF133459 Ehrharta calycina ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1192 Score = 398 bits (201), Expect = e-108 Identities = 299/334 (89%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 413 ttgaaacaagaaatacaaattttaagcaataataaagagcggtccgggttaataaaactg 472 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 | | |||| |||||||||||||||||||| ||||||| ||||| ||| | |||||| || Sbjct: 473 atagaattgactcggaaagaaattttttgaaagctccattgcgaaatttaaacctaatca 532 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || | |||||||| |||||||||||||||| |||| | ||||||||||||||||||||| Sbjct: 533 ttaagggagaagctgtgggaacgacagaactcatgactgcataggattttattgaaaaga 592 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggta 281 ||||||| |||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 593 atcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgata 652 Query: 282 agtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttatt 341 || |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 653 aggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatccttatt 712 Query: 342 gaattagaatactttaccgcgattcaataagagt 375 ||||||||||||||||||| ||||||||| |||| Sbjct: 713 gaattagaatactttaccgtgattcaataggagt 746 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattcta 464 |||||||||||| |||||||||| | ||||||||| ||||||||||| Sbjct: 789 taaatatagaatatagataaataaacgcacacatctagatatattcta 836
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 398 bits (201), Expect = e-108 Identities = 297/330 (90%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 50 agaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatt 109 |||| ||||||||| ||| ||||| ||||||| |||| |||||||||| ||||||| || Sbjct: 130981 agaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaagtgagaaa-tt 131039 Query: 110 aactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagga 169 |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||| Sbjct: 131040 gactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaagga 131099 Query: 170 gaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaac 229 |||||||||||||||||||||||||| | | |||||||||| ||||||||||||| || Sbjct: 131100 gaagcagtgggaacgacagaacctattactggataggattttcttgaaaagaatcccaat 131159 Query: 230 acttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 289 |||||||||||||||||||||||||||||| |||||||||| | |||| |||| Sbjct: 131160 acttcattgggtgggatggcggaacaaaccaaaaaaattgtcttattcgataaggttatg 131219 Query: 290 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 349 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131220 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattaga 131279 Query: 350 atactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||| Sbjct: 131280 atactttaccgcgattcaataagagtaaaa 131309 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 131342 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 131401 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 131402 tgactatatatt 131413
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 398 bits (201), Expect = e-108 Identities = 297/330 (90%), Gaps = 1/330 (0%) Strand = Plus / Plus Query: 50 agaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaatt 109 |||| ||||||||| ||| ||||| ||||||| |||| |||||||||| ||||||| || Sbjct: 15095 agaaatacaaatttcaaggaataacaaagagcgtcccgagttaataaaagtgagaaa-tt 15153 Query: 110 aactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagga 169 |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||| Sbjct: 15154 gactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccattaaagga 15213 Query: 170 gaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaac 229 |||||||||||||||||||||||||| | | |||||||||| ||||||||||||| || Sbjct: 15214 gaagcagtgggaacgacagaacctattactggataggattttcttgaaaagaatcccaat 15273 Query: 230 acttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttata 289 |||||||||||||||||||||||||||||| |||||||||| | |||| |||| Sbjct: 15274 acttcattgggtgggatggcggaacaaaccaaaaaaattgtcttattcgataaggttatg 15333 Query: 290 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 349 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 15334 aattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattaga 15393 Query: 350 atactttaccgcgattcaataagagtaaaa 379 |||||||||||||||||||||||||||||| Sbjct: 15394 atactttaccgcgattcaataagagtaaaa 15423 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 15456 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 15515 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 15516 tgactatatatt 15527
>gb|AY847082.1| Andropogon gerardii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 392 bits (198), Expect = e-106 Identities = 316/355 (89%), Gaps = 2/355 (0%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||| | ||||||||| ||||||| ||| | ||| Sbjct: 402 aaatcgtaacttgaaacaacaaatataaatataaagcaataaaaaagagcagcc-gagtt 460 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 461 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 520 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 521 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactacataggatttt 580 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 |||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 581 attggaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgct 640 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 ttatttgataaggttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 700 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 ||| ||||||| |||||||||||||| | ||||||||||||| |||||| ||||| Sbjct: 701 aatccttattggattagaatacttta-cacgattcaataagaataaaaaaaagga 754 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| ||||||||||||| Sbjct: 798 tggatatattctagatcttctttcttgactatatatt 834
>gb|DQ289159.1| Oryza granulata L ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1142 Score = 392 bits (198), Expect = e-106 Identities = 307/343 (89%), Gaps = 7/343 (2%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||||||||| ||||||| |||||||||||||||||| Sbjct: 424 ttgaaacaagaaatacaaatttcaagcaataacaaagagcgtcccgggttaataaaactg 483 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 484 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 542 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 543 ttaaaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaaga 602 Query: 222 atcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtctta-----tt 276 |||| || |||||||| ||||||||||||||||||||| ||| |||| || Sbjct: 603 atcccaatacttcatt-ggtgggatggcggaacaaaccaaaaaaattgccttatttgatt 661 Query: 277 tggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattc 336 || |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 tgataaggttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattt 721 Query: 337 ttattgaattagaatactttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 ttattgaattagaatactttaccgcgattcaataagagtaaaa 764 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || ||||| || ||||||||||||||||||||| | Sbjct: 821 taaatatagaatatagataaataaacatacacacctagatatattctagatcttctttct 880 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 881 tgactatatatt 892
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 391 bits (197), Expect = e-105 Identities = 289/322 (89%) Strand = Plus / Plus Query: 65 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 384 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 443 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 |||||||||||||| |||| ||||||| ||||||||||| || ||||||| ||||||||| Sbjct: 444 tttttggaagctccattgcaggattcaaacctaaccattaaaagagaagctgtgggaacg 503 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 ||| ||||||||| | ||||||||||| || ||||||||||||| ||||||||||||||| Sbjct: 504 acaaaacctatgactgcataggatttttttaaaaagaatcctaatacttcattgggtggg 563 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 304 ||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 564 atggcggaacaaaccaaaaaacttgctttatttggtaaggttataaattaacaaataaga 623 Query: 305 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 364 |||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 624 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatactttatcacgat 683 Query: 365 tcaataagagtaaaaataagga 386 ||||||||| |||||||||||| Sbjct: 684 tcaataagaataaaaataagga 705
>gb|AF133463.1|AF133463 Sucrea maculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 391 bits (197), Expect = e-105 Identities = 331/377 (87%), Gaps = 7/377 (1%) Strand = Plus / Plus Query: 18 taatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaa 77 ||||||||||| |||| ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 405 taatagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaagcaataataag 464 Query: 78 gagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctc 137 |||| | || ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 465 gagcaactcgagttaataaaactgagaaaattgactcggaaagaaattttttggaagctc 524 Query: 138 cgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatga 197 | ||| |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 525 cattgtgggattcagacctaaccattaaaggagaagtagtgggaacgatagaacctatga 584 Query: 198 ttccataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaa 257 | ||||| ||| | |||| | |||| |||||||||||| ||||||||||||||| Sbjct: 585 ctgcatagaattcttttga------ttctaatacttcattgggtaggatggcggaacaaa 638 Query: 258 ccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaa 317 || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 639 ccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaagagtaa 698 Query: 318 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 377 ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| Sbjct: 699 atattcgcccgcgaaatccttattgaattagaatactttactgtgattcaataagagt-c 757 Query: 378 aaataaggatatttttt 394 ||||||||| ||||||| Sbjct: 758 aaataaggagatttttt 774 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 430 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 804 tagataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 862
>gb|U54741.1|SMU54741 Sucrea maculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1030 Score = 391 bits (197), Expect = e-105 Identities = 331/377 (87%), Gaps = 7/377 (1%) Strand = Plus / Plus Query: 18 taatagagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaa 77 ||||||||||| |||| ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 365 taatagagaattcgaaatcgtaacttgaaacaagaaatacaaatttaaagcaataataag 424 Query: 78 gagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctc 137 |||| | || ||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 425 gagcaactcgagttaataaaactgagaaaattgactcggaaagaaattttttggaagctc 484 Query: 138 cgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatga 197 | ||| |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| Sbjct: 485 cattgtgggattcagacctaaccattaaaggagaagtagtgggaacgatagaacctatga 544 Query: 198 ttccataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaa 257 | ||||| ||| | |||| | |||| |||||||||||| ||||||||||||||| Sbjct: 545 ctgcatagaattcttttga------ttctaatacttcattgggtaggatggcggaacaaa 598 Query: 258 ccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaa 317 || ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 599 ccaaaaaaattgtcttatttggtaaggttataaattaacaaataagacaggaaagagtaa 658 Query: 318 atattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaa 377 ||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| Sbjct: 659 atattcgcccgcgaaatccttattgaattagaatactttactgtgattcaataagagt-c 717 Query: 378 aaataaggatatttttt 394 ||||||||| ||||||| Sbjct: 718 aaataaggagatttttt 734 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 430 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatatt 488 |||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 764 tagataaatagacacacacatctagatatattctagatcttctttcttgactatatatt 822
>ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 105 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 164 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 165 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 224 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 225 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 284 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 285 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 344 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 345 ttagaatactttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 310 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 369 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 370 tgactatatatt 381
>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24 mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 105 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 164 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 165 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 224 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 225 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 284 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 285 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 344 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 345 ttagaatactttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 310 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 369 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 370 tgactatatatt 381
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 385 bits (194), Expect = e-103 Identities = 293/327 (89%), Gaps = 1/327 (0%) Strand = Plus / Plus Query: 58 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 117 |||||| || |||||||||||||| ||||||| ||||||||||||||||||| ||||||| Sbjct: 411 aaatttaaaccaataataaagagcagcccggggtaataaaactgagaaaattgactcgga 470 Query: 118 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 177 |||| |||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 471 aagatattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 530 Query: 178 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 237 |||||||||| ||||||||| | ||||||||| |||||||||||||||||| |||||||| Sbjct: 531 gggaacgacaaaacctatgactacataggattgtattgaaaagaatcctaatacttcatt 590 Query: 238 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaaca 297 |||||||||||||||||||||| || |||||||||||| || ||||||| || Sbjct: 591 gggtgggatggcggaacaaaccaaaaaaattactttatttggtaagattctaaattacca 650 Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatacttta 357 ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 651 aataagacaggaaagagtaaatattcgcccgcg-aatctttattgaattagaatacttta 709 Query: 358 ccgcgattcaataagagtaaaaataag 384 || ||||||||||||||||||||||| Sbjct: 710 ccatgattcaataagagtaaaaataag 736 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 455 atatattctagatcttcttttttgactatatatt 488 |||||||||||||||||||| || |||||||||| Sbjct: 788 atatattctagatcttctttctttactatatatt 821
>ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 105 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 164 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 165 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 224 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 225 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 284 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 285 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 344 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 345 ttagaatactttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 309 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 368 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 369 tgactatatatt 380
>ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 105 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 164 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 165 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 224 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 225 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 284 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 285 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 344 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 345 ttagaatactttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 309 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 368 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 369 tgactatatatt 380
>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full insert sequence Length = 2166 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Plus Query: 105 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 164 ||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||||| Sbjct: 2 aaattgactcggaaagaaattttttggaagctccattgcgagattcaaacctaaccatta 61 Query: 165 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 224 ||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagcagtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 225 ctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagt 284 | || |||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaaccaaaaaaattgtcttatttgataagg 181 Query: 285 ttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaa 344 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 182 ttatgaattaacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaa 241 Query: 345 ttagaatactttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||||||||||| Sbjct: 242 ttagaatactttaccgcgattcaataagagtaaaa 276 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 319 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 378 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 379 tgactatatatt 390
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 383 bits (193), Expect = e-103 Identities = 289/322 (89%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 65 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 412 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 471 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 |||||||||||||| |||| ||||||| ||||||||||| || ||||||| ||||||||| Sbjct: 472 tttttggaagctccattgcaggattcaaacctaaccattaaaagagaagctgtgggaacg 531 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 ||| ||||||||| | |||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 532 acaaaacctatgactgcataggattttagtaaaaagaatcctaatacttcattgggtggg 591 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 304 ||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 592 atggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataaga 651 Query: 305 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 364 |||||||||||||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 652 caggaaagagtaaatattcgcccgcgaaatctttattggattagaatacttta-cacgat 710 Query: 365 tcaataagagtaaaaataagga 386 ||||||||| |||||||||||| Sbjct: 711 tcaataagaataaaaataagga 732 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 455 atatattctagatcttcttttttgactatatatt 488 |||||||||||||||||||| ||||||||||||| Sbjct: 777 atatattctagatcttctttcttgactatatatt 810
>gb|AY847090.1| Isachne arundinacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1101 Score = 381 bits (192), Expect = e-102 Identities = 288/321 (89%), Gaps = 1/321 (0%) Strand = Plus / Plus Query: 65 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 |||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 395 aagcaataataaggagtagcccgtgttaataaaactgagaaaattgactcggaaagaaat 454 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 |||||||||||||| |||| ||||||| |||||| |||| |||||||||| ||||||||| Sbjct: 455 tttttggaagctccattgcaggattcaaacctaaacattaaaggagaagctgtgggaacg 514 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 ||| ||||||||| |||||||||||||||||||||||||||| |||||||| | |||| Sbjct: 515 acaaaacctatgacagcataggattttattgaaaagaatcctaatacttcattagatggg 574 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 304 ||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 575 atggcggaacaaaccaaaaaaattgctttatttggtaag-ttataaattaacaaataaga 633 Query: 305 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 364 |||||||||||||| ||||||||||||||| |||||| |||||||||||||||| |||| Sbjct: 634 caggaaagagtaaaaattcgcccgcgaaatctttattggattagaatactttaccacgat 693 Query: 365 tcaataagagtaaaaataagg 385 ||||||||||||||||||||| Sbjct: 694 tcaataagagtaaaaataagg 714 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Plus Query: 447 acatctggatatattctagatcttcttttttgactatatatt 488 |||| |||||||||| |||||||||||| | |||||||||| Sbjct: 754 acatttggatatattatagatcttctttctaaactatatatt 795
>gb|AY847114.1| Spartochloa scirpoidea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1176 Score = 377 bits (190), Expect = e-101 Identities = 309/350 (88%), Gaps = 2/350 (0%) Strand = Plus / Plus Query: 37 gtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataa 96 ||||||| ||| || || || |||||| ||||||||| ||||||| ||| |||||||||| Sbjct: 407 gtaacttcaaacaataaataaaaatttaaagcaataaaaaagagcagccggggttaataa 466 Query: 97 aactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacct 156 ||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||| |||| Sbjct: 467 aactgagaaaattgactcggaaatccattttttagaagctccattgcaggattcaaacct 526 Query: 157 aaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattga 216 ||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| |||| Sbjct: 527 aaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggattttcttga 586 Query: 217 aaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatt 276 |||||||||||| |||||||||||||||||||||||||||||| ||| ||||| Sbjct: 587 aaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgctttatt 646 Query: 277 tggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattc 336 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 647 tggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaaccc 706 Query: 337 ttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 |||||| ||||||||||||| | ||||||||||||| |||||||||||| Sbjct: 707 ttattggattagaatacttt--cacgattcaataagaataaaaataagga 754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactat 483 ||||||||||||||||||||||| |||||||| Sbjct: 796 tggatatattctagatcttctttcttgactat 827
>gb|AY847112.1| Cyperochloa hirsuta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 931 Score = 377 bits (190), Expect = e-101 Identities = 313/355 (88%), Gaps = 1/355 (0%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||| ||| || || || |||||| |||||| || ||||||| ||| ||||| Sbjct: 156 aaatcgtaacttcaaacaataaataaaaatttaaagcaacaaaaaagagcagccggggtt 215 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||| Sbjct: 216 aataaaactgagaaaattgactcggaaataaattttttggaagctccattgcaggattca 275 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 276 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 335 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 |||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 336 cttgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 395 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 396 ttatttggtaaggttataaattaacaaataaaacaggaaagagtaaatattcgcccgcga 455 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 ||| |||||| |||| ||||||||| | ||||||||||||| |||||||||||| Sbjct: 456 aatctttattggattaaaatacttta-cacgattcaataagaataaaaataagga 509 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||| ||||||||| |||||||| |||| Sbjct: 552 tggatatattctaaatcttctttcttgactatctatt 588
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 436 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 495 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||| Sbjct: 496 tgactcggaaagaaattttttggaagctccattgtggaattcagacctaaccattaaagg 555 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 556 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 615 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 616 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 675 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 676 aatataaattaacaaataagacagaaaagagtaaatattcgcccgcgaaat 726 Score = 115 bits (58), Expect = 1e-22 Identities = 113/130 (86%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||| ||||||| |||| || |||||||| ||||| Sbjct: 731 gattcaataagagtaaaaataaggagatttttttttagaaagattacattat---ctata 787 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| ||||||||| ||||| ||||| ||||||||||||||||||||| ||| Sbjct: 788 aatatataatacagataaatagacacacgcatctagatatattctagatcttctttcttg 847 Query: 479 actatatatt 488 |||||||||| Sbjct: 848 actatatatt 857
>gb|AY912194.1| Chusquea bambusoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1174 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 397 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 456 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 457 tgactcggaaagaaattttttgtaagctccattgtgggattcagacctaaccattaaagg 516 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 517 agaagtagtgggaacgacagaacctatgactgcataggatcttattgaaaagaatcctaa 576 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 577 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 636 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 aatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 687 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 744 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 803 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 804 tgactatatatt 815 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt 394 |||||||||||||||||||||||||||| |||| Sbjct: 692 gattcaataagagtaaaaataaggatatatttt 724
>gb|U62786.1|COU62786 Chusquea oxylepis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 406 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 465 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 466 tgactcggaaagaaattttttgtaagctccattgtgggattcagacctaaccattaaagg 525 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 526 agaagtagtgggaacgacagaacctatgactgcataggatcttattgaaaagaatcctaa 585 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 586 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 645 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 aatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 696 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 753 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 812 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 813 tgactatatatt 824 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt 394 ||||||||||||||||||||||||||||||||| Sbjct: 701 gattcaataagagtaaaaataaggatatttttt 733
>gb|U62780.1|CAU62780 Chusquea aff. fendleri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 123 bits (62), Expect = 6e-25 Identities = 114/130 (87%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 479 actatatatt 488 |||||||||| Sbjct: 816 actatatatt 825
>gb|AY847085.1| Arundinella hirta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 375 bits (189), Expect = e-101 Identities = 308/349 (88%), Gaps = 7/349 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||| | ||||||||| ||||||| ||| ||||| Sbjct: 399 aaatcgtaacttgaaacaacaaataaaaatataaagcaataaaaaagagcagcc-gggtt 457 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 458 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 517 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 518 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactacataggatttt 577 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 578 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccaaaaaaattgct 637 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 ttatttgataaagttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 697 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 380 ||| || |||||||||||||||| ||||||||||||| |||||| Sbjct: 698 aatcct------attagaatactttaccacgattcaataagaataaaaa 740 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 455 atatattctagatcttcttttttgactatatatt 488 |||||||||||||||||||| ||||||||||||| Sbjct: 797 atatattctagatcttctttcttgactatatatt 830
>gb|AY847076.1| Aristida purpurea var. curvifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1112 Score = 375 bits (189), Expect = e-101 Identities = 309/350 (88%), Gaps = 1/350 (0%) Strand = Plus / Plus Query: 31 aaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggt 90 ||||| ||||||||||| || || || |||||| || ||||||||| |||| || ||||| Sbjct: 377 aaaatcgtaacttgaaacaataaataaaaatttaaaacaataataaggagcagctcgggt 436 Query: 91 taataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattc 150 ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| Sbjct: 437 taataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattc 496 Query: 151 agacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattt 210 | |||||| |||| || ||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 497 aaacctaagcattaaaagagaagctgtgggaacgacaaaacctatgactccataggattt 556 Query: 211 tattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgt 270 | |||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 557 ttttgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgc 616 Query: 271 cttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcg 330 |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 617 tttatttggtaaggttataaattaacaaataagacagtaaagagtaaatatttgcccgcg 676 Query: 331 aaattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 380 |||| |||||| ||| |||||||||| | ||||| |||||||||||||| Sbjct: 677 aaatctttattggatttgaatacttta-cacgatttaataagagtaaaaa 725
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 373 bits (188), Expect = e-100 Identities = 319/364 (87%), Gaps = 2/364 (0%) Strand = Plus / Plus Query: 22 agagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagc 81 ||||||| ||||| ||||||| ||| || || || ||||| ||||||||| ||||||| Sbjct: 394 agagaattcaaaatcgtaacttcaaacaataaataaaaattgaaagcaataaaaaagagc 453 Query: 82 cgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgtt 141 ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| || Sbjct: 454 agcccgggttaataaaactgagaaaattgactcggaaataaattttttggaagctccatt 513 Query: 142 gcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattcc 201 || ||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| | | Sbjct: 514 gcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgc 573 Query: 202 ataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnn 261 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 574 ataggattttattgaaaagaatcctaatacttcattggttgggatggcggaacaaaccaa 633 Query: 262 nnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatat 321 ||| |||||||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 634 aaaaattgctttatttggtaaggttataaattaacaaatatgacaggaaagagtaaattt 693 Query: 322 tcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaat 381 || |||||||||| |||||| |||| |||||||| | ||||||||||||| ||||||| Sbjct: 694 tcccccgcgaaatctttattggattataatacttt--cacgattcaataagaataaaaat 751 Query: 382 aagg 385 |||| Sbjct: 752 aagg 755 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| |||||||| |||| Sbjct: 804 tggatatattctagatcttctttcttgactatctatt 840
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 369 bits (186), Expect = 6e-99 Identities = 302/339 (89%), Gaps = 3/339 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| || | ||||||||| ||| Sbjct: 144957 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcctgagttaataaa-ctg 145015 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 145016 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 145074 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || |||||||||||||||||| |||||||||||||| | |||||||||| ||||||| | Sbjct: 145075 ttaaaggagaagcagtgggaatgacagaacctatgactggataggattttcttgaaaaaa 145134 Query: 222 atcctaacacttcattgggtgggatggcggaacaaacc-nnnnnnnttgtcttatttggt 280 |||| || |||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 145135 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaaattgtcttatttgat 145194 Query: 281 aagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttat 340 ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 145195 aaggttatgaattaacaaataagacatgaaagagtaaatattcgcccgcgaaatttttat 145254 Query: 341 tgaattagaatactttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||||||||||||||| Sbjct: 145255 tgaattagaatactttaccgcgattcaataagagtaaaa 145293 Score = 81.8 bits (41), Expect = 2e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 475 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 145326 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 145385 Query: 476 ttgactatatatt 488 ||||||||||||| Sbjct: 145386 ttgactatatatt 145398
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 369 bits (186), Expect = 6e-99 Identities = 302/339 (89%), Gaps = 3/339 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| ||||||| || | ||||||||| ||| Sbjct: 4144 ttgaaacaagaaatacaaatttcaaggaataacaaagagcgtcctgagttaataaa-ctg 4202 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 4203 agaaa-ttgactcggaaagaaattttttggaagctccattgcgagattcaaacctaacca 4261 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || |||||||||||||||||| |||||||||||||| | |||||||||| ||||||| | Sbjct: 4262 ttaaaggagaagcagtgggaatgacagaacctatgactggataggattttcttgaaaaaa 4321 Query: 222 atcctaacacttcattgggtgggatggcggaacaaacc-nnnnnnnttgtcttatttggt 280 |||| || |||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 4322 atcccaatacttcattgggtgggatggcggaacaaaccaaaaaaaattgtcttatttgat 4381 Query: 281 aagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttat 340 ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 4382 aaggttatgaattaacaaataagacatgaaagagtaaatattcgcccgcgaaatttttat 4441 Query: 341 tgaattagaatactttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||||||||||||||| Sbjct: 4442 tgaattagaatactttaccgcgattcaataagagtaaaa 4480 Score = 81.8 bits (41), Expect = 2e-12 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt- 475 |||||||||||| |||||||||| || |||||||| ||||||||||||||| |||||| Sbjct: 4513 taaatatagaatatagataaataaacatacacatctagatatattctagatcctcttttc 4572 Query: 476 ttgactatatatt 488 ||||||||||||| Sbjct: 4573 ttgactatatatt 4585
>gb|AY912195.1| Chusquea culeou ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1181 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 402 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 461 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 462 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 521 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 522 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 581 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 582 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 641 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 642 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 692 Score = 119 bits (60), Expect = 9e-24 Identities = 114/131 (87%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||||||||||| |||| || |||||||| |||| Sbjct: 697 gattcaataagagtaaaaataaggatatttttttttaagaaagattacattat---ctat 753 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 754 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 813 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 814 gactatatatt 824
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 428 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 487 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 488 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 547 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 548 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 607 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 608 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 667 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 668 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 718 Score = 105 bits (53), Expect = 1e-19 Identities = 112/131 (85%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 |||||||||||||||||| |||||| ||||||| |||| || |||||||| |||| Sbjct: 723 gattcaataagagtaaaantaaggagatttttttttaagaaagattacattat---ctat 779 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 780 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 839 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 840 gactatatatt 850
>gb|U62793.1|NAU62793 Neurolepis aperta ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1052 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 405 aagaaatacaaattttaagcaataataaagagcggcccgggttaataaaactgagaaaat 464 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | ||| |||||||| ||||||||||||||| ||| || ||||||||||||||||| || | Sbjct: 465 tgacttggaaagaatttttttggaagctccattgtggaattcagacctaaccattaaacg 524 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 525 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 584 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 585 tacttcattgggtgggatggcggaacaaaccaaaagaattgccttatttggtaaggttat 644 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 aatataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 695 Score = 103 bits (52), Expect = 5e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 409 attatctataaatatagaatttagataaatatccacacacatctggatatattctagatc 468 |||||||||||||||||||| |||| ||||| ||||||||||| ||||||||| ||||| Sbjct: 767 attatctataaatatagaatatagaaaaatagacacacacatctagatatattccagatc 826 Query: 469 ttcttttttgactatatatt 488 |||||| ||||||||||||| Sbjct: 827 ttctttcttgactatatatt 846 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataagga 386 ||||||||||||||||||||||||| Sbjct: 713 gattcaataagagtaaaaataagga 737
>gb|U62789.1|CTU62789 Chusquea talamancensis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 123 bits (62), Expect = 6e-25 Identities = 114/130 (87%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 479 actatatatt 488 |||||||||| Sbjct: 816 actatatatt 825
>gb|U62788.1|CSU62788 Chusquea spencei ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 123 bits (62), Expect = 6e-25 Identities = 114/130 (87%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 479 actatatatt 488 |||||||||| Sbjct: 816 actatatatt 825
>gb|U62787.1|CSU62787 Chusquea sp. A ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 407 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 466 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 467 tgactcggaaagaaattttttgaaagctccattgtgggattcagacctaaccattaaagg 526 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 527 agaagtagtgggaacgacagaacctatgactgcataggatcttattgaaaagaatcctaa 586 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 587 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 646 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 647 aatataaattaacaaataagataggaaagagtaaatattcgcccgcgaaat 697 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 752 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 811 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 812 tgactatatatt 823 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt 394 ||||||||||||||||||||||||||||||||| Sbjct: 702 gattcaataagagtaaaaataaggatatttttt 734
>gb|U62785.1|COU62785 Chusquea oligophylla ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 406 aagaaatagaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 465 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| Sbjct: 466 tgactcggaaagaaattttttgtaagctccattgtgggattcagacctaaccattaaagg 525 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 526 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 585 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 586 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 645 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 646 aatataaattaacaaataagacaggaaagagtaaatatccgcccgcgaaat 696 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| | Sbjct: 752 taaatatataatacagataaatagacacacacatctagatatattctagatcttctttct 811 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 812 tgactatatatt 823 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt 394 ||||||||||||||||||||||||||||||||| Sbjct: 701 gattcaataagagtaaaaataaggatatttttt 733
>gb|U62784.1|CEU62784 Chusquea exasperata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 tgactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 816 gactatatatt 826
>gb|U54752.1|CTU54752 Chusquea tessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 123 bits (62), Expect = 6e-25 Identities = 114/130 (87%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 479 actatatatt 488 |||||||||| Sbjct: 816 actatatatt 825
>gb|U54758.1|CSU54758 Chusquea sp. 'LC et al. 1309' ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1035 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 405 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 464 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 465 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 524 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 525 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 584 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 585 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 644 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 645 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 695 Score = 103 bits (52), Expect = 5e-19 Identities = 113/133 (84%), Gaps = 9/133 (6%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt------agaaggactacattattatct 415 ||||||||||||||||||||||||| ||||||| |||| || |||||||| || Sbjct: 700 gattcaataagagtaaaaataaggagatttttttttttaagaaagattacattat---ct 756 Query: 416 ataaatatagaatttagataaatatccacacacatctggatatattctagatcttctttt 475 ||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 757 ataaatatataatacggataaatagacacacacatctagatatattctagatcttctttc 816 Query: 476 ttgactatatatt 488 ||||||||||||| Sbjct: 817 ttgactatatatt 829
>gb|U54754.1|CSU54754 Chusquea serpens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataataaggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 816 gactatatatt 826
>gb|U54753.1|CSU54753 Chusquea subtessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 123 bits (62), Expect = 6e-25 Identities = 114/130 (87%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 479 actatatatt 488 |||||||||| Sbjct: 816 actatatatt 825
>gb|U54751.1|CRU54751 Chusquea ramosissima ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 816 gactatatatt 826
>gb|U54760.1|CLU54760 Chusquea liebmannii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 tgactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 699 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 755 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 756 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 815 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 816 gactatatatt 826
>gb|U54759.1|CCU54759 Chusquea coronalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 403 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 462 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 463 tgactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 522 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 523 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 582 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 583 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 642 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 643 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 693 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 698 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 754 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 755 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 814 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 815 gactatatatt 825
>gb|U54757.1|CBU54757 Chusquea bilimekii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1033 Score = 369 bits (186), Expect = 6e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 405 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 464 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 465 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 524 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 525 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 584 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 585 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 644 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 645 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 695 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 700 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 756 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 757 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 816 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 817 gactatatatt 827
>gb|AY847100.1| Chasmanthium sessiliflorum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 367 bits (185), Expect = 2e-98 Identities = 283/318 (88%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||| ||||| Sbjct: 372 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagccagggtt 431 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 432 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 491 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||| | ||||||||| | ||||||||||| Sbjct: 492 aacctaaccattaaaggagaagctgtgggaacgagaaaacctatgactgcataggatttt 551 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| ||||||||||||||||||||| |||||||| || Sbjct: 552 attgaaaagaatcctaatacttcattgggtgggatggcgaaacaaaccaaaaaaaatgct 611 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 671 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 672 aatctttattggattaga 689 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactat 483 ||||||||||||||||||||||| |||||||| Sbjct: 764 tggatatattctagatcttctttcttgactat 795
>gb|AY847099.1| Chasmanthium laxum rpl16 gene, intron; chloroplast Length = 1165 Score = 367 bits (185), Expect = 2e-98 Identities = 283/318 (88%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||| ||||| Sbjct: 393 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagccagggtt 452 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 453 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 512 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||| | ||||||||| | ||||||||||| Sbjct: 513 aacctaaccattaaaggagaagctgtgggaacgagaaaacctatgactgcataggatttt 572 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| ||||||||||||||||||||| |||||||| || Sbjct: 573 attgaaaagaatcctaatacttcattgggtgggatggcgaaacaaaccaaaaaaaatgct 632 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 692 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 693 aatctttattggattaga 710 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactat 483 ||||||||||||||||||||||| |||||||| Sbjct: 786 tggatatattctagatcttctttcttgactat 817
>gb|AY847096.1| Bromuniola gossweileri rpl16 gene, intron; chloroplast Length = 557 Score = 367 bits (185), Expect = 2e-98 Identities = 283/318 (88%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||| ||||| Sbjct: 204 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagccagggtt 263 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 264 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 323 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||| | ||||||||| | ||||||||||| Sbjct: 324 aacctaaccattaaaggagaagctgtgggaacgagaaaacctatgactgcataggatttt 383 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| ||||||||||||||||||||| |||||||| || Sbjct: 384 attgaaaagaatcctaatacttcattgggtgggatggcgaaacaaaccaaaaaaaatgct 443 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 503 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 504 aatctttattggattaga 521
>gb|AF133482.1|AF133482 Chasmanthium laxum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1195 Score = 367 bits (185), Expect = 2e-98 Identities = 307/349 (87%), Gaps = 7/349 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||| ||||| Sbjct: 419 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcctgggtt 478 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 479 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 538 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| ||||||||| |||| |||||| | ||||||||||| Sbjct: 539 aacctaaccattaaaggagaagctgtgggaacg--agaatctatgactgcataggatttt 596 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| ||||||||||||||||||||| |||||||| |||| Sbjct: 597 attgaaaagaatcctaatacttcattgggtgggatggcgaaacaaaccaaaaaaattgtt 656 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 716 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 380 ||| |||||| |||||| ||||||||||||||||| |||||| Sbjct: 717 aatctttattggcttagaa-----caccgcgattcaataagaataaaaa 760 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactat 483 ||||||||||||||||||||||| |||||||| Sbjct: 816 tggatatattctagatcttctttcttgactat 847
>gb|U62781.1|CSU62781 Chusquea scandens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 367 bits (185), Expect = 2e-98 Identities = 256/282 (90%), Gaps = 5/282 (1%) Strand = Plus / Plus Query: 58 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 117 |||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 413 aaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaatttactcgga 472 Query: 118 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 177 ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| ||| Sbjct: 473 aagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtagt 532 Query: 178 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 237 |||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||| Sbjct: 533 gggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaatacttcatt 592 Query: 238 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaat 292 |||||||||||||||||||||| ||| ||||||||||||| | ||||||| Sbjct: 593 gggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttataatataaat 652 Query: 293 taacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 653 taacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 123 bits (62), Expect = 6e-25 Identities = 114/130 (87%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 479 actatatatt 488 |||||||||| Sbjct: 816 actatatatt 825
>gb|AF133483.1|AF133483 Zeugites pittieri ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1107 Score = 363 bits (183), Expect = 4e-97 Identities = 263/292 (90%) Strand = Plus / Plus Query: 58 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 117 |||||| ||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 451 aaatttcaagcaataaaaaagagcagcccgggttaataaaactgagaaaattgactcgga 510 Query: 118 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 177 ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 511 aagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 570 Query: 178 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 237 |||||||| | ||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 571 gggaacgaaaaaacctatgactggataggattttattgaaaagaatcctaatacttcatt 630 Query: 238 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaaca 297 |||||||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct: 631 gggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaaca 690 Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 349 ||||||||||||||||||||| ||||||||||||||| |||||| |||||| Sbjct: 691 aataagacaggaaagagtaaacattcgcccgcgaaatctttattggattaga 742
>gb|AY847089.1| Tristachya biseriata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1150 Score = 361 bits (182), Expect = 1e-96 Identities = 285/322 (88%) Strand = Plus / Plus Query: 65 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 415 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 474 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 |||||||||||||| |||| ||||||| ||||||||||| || ||||||| ||||||||| Sbjct: 475 tttttggaagctccattgcaggattcaaacctaaccattaaaagagaagctgtgggaacg 534 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 ||| ||||||||| | |||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct: 535 acaaaacctatgactgcataggattttattaaaaagaatcctaatacttcattgggcggg 594 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 304 ||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 595 atggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataaga 654 Query: 305 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 364 | | |||||||||||||||||| ||||||| |||||| |||||||||||||| | |||| Sbjct: 655 cngaaaagagtaaatattcgcctgcgaaatctttattggattagaatactttatcacgat 714 Query: 365 tcaataagagtaaaaataagga 386 ||||||| | |||||||||||| Sbjct: 715 tcaataaaaataaaaataagga 736 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| ||||||||||||| Sbjct: 778 tggatatattctagatcttctttcttgactatatatt 814
>gb|U62790.1|CVU62790 Chusquea vulcanalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 361 bits (182), Expect = 1e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 464 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 523 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||||| Sbjct: 524 agaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaa 583 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 643 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 644 aatataaattaaccaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 123 bits (62), Expect = 6e-25 Identities = 114/130 (87%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 479 actatatatt 488 |||||||||| Sbjct: 816 actatatatt 825
>gb|U62782.1|CTU62782 Chusquea tomentosa ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1030 Score = 361 bits (182), Expect = 1e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 403 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 462 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 463 ttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaagg 522 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | |||||| |||| |||||||||||||||| Sbjct: 523 agaagtagtgggaacgacagaacctatgactgcatagggtttttttgaaaagaatcctaa 582 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 583 tacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 642 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 643 aatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 693 Score = 123 bits (62), Expect = 6e-25 Identities = 114/130 (87%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 698 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 754 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 755 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 814 Query: 479 actatatatt 488 |||||||||| Sbjct: 815 actatatatt 824
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 359 bits (181), Expect = 6e-96 Identities = 277/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Minus Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 80552 aataaagagcagcc-gggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 80496 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 80495 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 80436 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80435 ctatgactacataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 80376 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||| ||||||| |||| || |||||||||||||||||||||||| Sbjct: 80375 aacaaaccaaaaaaattgctttatttgataaggttctaaattaacaaataagacaggaaa 80316 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 80315 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 80256 Query: 372 gagtaaaaa 380 || |||||| Sbjct: 80255 gaataaaaa 80247 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| ||||||||||||| Sbjct: 80195 tggatatattctagatcttctttcttgactatatatt 80159
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 359 bits (181), Expect = 6e-96 Identities = 281/314 (89%), Gaps = 2/314 (0%) Strand = Plus / Plus Query: 69 aataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaatttt- 127 ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 419 aataataaagagcagcctgggttaataaaactgagaaaattgactcggaaagaaattttg 478 Query: 128 ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgaca 187 ||||||||||| ||||||| |||||||||||||||| | ||||||||||||||||||||| Sbjct: 479 ttggaagctccattgcggggttcagacctaaccattaatggagaagcagtgggaacgaca 538 Query: 188 gaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggat 246 |||||||||| | |||| |||||| || |||| ||||||||| ||||||||||||||||| Sbjct: 539 gaacctatgactgcataagattttcttaaaaacgaatcctaatacttcattgggtgggat 598 Query: 247 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 306 ||||||||||||| ||| |||||||||||| ||||||||| | ||||||||| Sbjct: 599 ggcggaacaaaccaaaaaaattgctttatttggtaaggttataaattgatgaataagaca 658 Query: 307 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattc 366 |||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||| Sbjct: 659 ggaaagagtaaatattcgcccgcgaaatctttattggattagaatactttactgtgattc 718 Query: 367 aataagagtaaaaa 380 |||||||||||||| Sbjct: 719 aataagagtaaaaa 732 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactatatat 487 ||||||||| ||||||| ||| ||||||||||| ||||||||| |||| ||||||| Sbjct: 779 agataaatagacacacacgtctagatatattctatatcttctttcttgattatatat 835
>gb|AY847075.1| Karroochloa purpurea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 357 bits (180), Expect = 2e-95 Identities = 305/349 (87%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||||||||||||||| || | | ||||| ||| ||||||||||||| ||||||||| Sbjct: 374 aaattgtaacttgaaacaactaatcaaaattgaaagaaataataaagagcagcccgggtt 433 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||||||||| ||||||||||||| |||||||| |||| ||||||| Sbjct: 434 aataaaactgagaaaattaactcgaaaagaaatttttttgaagctccattgcaggattca 493 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| ||||||||||| ||||||||| | ||||||||||| Sbjct: 494 aacctaaccattaaaggagaagctatgggaacgacaaaacctatgactgcataggatttt 553 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| || |||| |||||||||||||||||||||| ||| Sbjct: 554 attgaaaagaatcctaatacatcatcgggtgggatggcggaacaaaccccaaaacttgct 613 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 ttatttggtaaaattataaattaacaaataagacaggaaagagtaaatattcgcccgcga 673 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 380 ||| |||||| ||| ||||||||||| ||||||||||| |||||| Sbjct: 674 aatatttattggattcgaatactttactataattcaataagactaaaaa 722
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 357 bits (180), Expect = 2e-95 Identities = 311/358 (86%), Gaps = 8/358 (2%) Strand = Plus / Plus Query: 31 aaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggt 90 ||||| ||||||||||| || || || |||||| || ||||||||| |||| || ||||| Sbjct: 382 aaaatcgtaacttgaaacaataaataaaaatttaaaacaataataaggagcagctcgggt 441 Query: 91 taataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattc 150 ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| Sbjct: 442 taataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattc 501 Query: 151 agacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggattt 210 | |||||| |||| || ||||||| |||||||||||| ||||||||| |||||||||||| Sbjct: 502 aaacctaagcattaaaagagaagctgtgggaacgacaaaacctatgactccataggattt 561 Query: 211 tattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgt 270 | |||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct: 562 ttttgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgc 621 Query: 271 cttatttggtaagtttataaattaa--------caaataagacaggaaagagtaaatatt 322 |||||||||||| ||||||||||| |||||||||||| |||||||||||||| Sbjct: 622 tttatttggtaaggttataaattaacaaataagcaaataagacagtaaagagtaaatatt 681 Query: 323 cgcccgcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 380 |||||||||||| |||||| ||| |||||||||||| ||||| |||||||||||||| Sbjct: 682 cgcccgcgaaatctttattggatttgaatactttaccacgatttaataagagtaaaaa 739
>gb|AY912196.1| Neurolepis aristata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1206 Score = 353 bits (178), Expect = 3e-94 Identities = 261/291 (89%), Gaps = 5/291 (1%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 414 aagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 473 Query: 109 taactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaagg 168 | |||||||||||||||||||||||||||| ||| || ||||||||||||||||| |||| Sbjct: 474 tgactcggaaagaaattttttggaagctccattgtggaattcagacctaaccattaaagg 533 Query: 169 agaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaa 228 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 534 agaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaatcctaa 593 Query: 229 cacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt--- 285 | |||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 594 tatttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggttat 653 Query: 286 --tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 |||||||||||||||||| ||| ||||||||||| |||||||||||||| Sbjct: 654 aatataaattaacaaataagccagaaaagagtaaattttcgcccgcgaaat 704 Score = 107 bits (54), Expect = 3e-20 Identities = 112/130 (86%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||| ||||||| |||| || |||||||| ||||| Sbjct: 709 gattcaataagagtaaaaataaggagatttttttttagaaagattacattat---ctata 765 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| ||||||||| ||| | ||||| ||||||||||||||||||||| ||| Sbjct: 766 aatatataatccagataaatagacactcgcatctagatatattctagatcttctttcttg 825 Query: 479 actatatatt 488 |||||||||| Sbjct: 826 actatatatt 835
>gb|AY847086.1| Danthoniopsis dinteri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1152 Score = 351 bits (177), Expect = 1e-93 Identities = 285/322 (88%), Gaps = 1/322 (0%) Strand = Plus / Plus Query: 65 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 ||||||||| ||||||| |||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 417 aagcaataaaaaagagcagccccggttgataaaactgagaaaattgactcggaaagaaat 476 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 |||||||||||||| |||| ||||||| |||||||| || || ||||||| ||||||||| Sbjct: 477 tttttggaagctccattgcaggattcaaacctaacctttaaaagagaagctgtgggaacg 536 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 ||| ||||||||| | ||||||||||| | ||||||||||||| ||||||||||||||| Sbjct: 537 acaaaacctatgactgcataggattttttgaaaaagaatcctaatacttcattgggtggg 596 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataaga 304 |||||||| |||||| ||| |||||||||||| |||||||||||||||||||| Sbjct: 597 atggcggatcaaaccaaaaaaattgctttatttggtaaggttataaattaacaaataaga 656 Query: 305 caggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgat 364 |||||||||||||||||||||||||||||| ||||| |||||||||||||| | |||| Sbjct: 657 caggaaagagtaaatattcgcccgcgaaatctttattagattagaatacttta-cacgat 715 Query: 365 tcaataagagtaaaaataagga 386 ||||||||| |||||||||||| Sbjct: 716 tcaataagaataaaaataagga 737 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||| ||| || |||||||||| Sbjct: 779 tggatatattctagatcttttttctttactatatatt 815
>gb|AF133477.1|AF133477 Zea mays ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 351 bits (177), Expect = 1e-93 Identities = 275/309 (88%), Gaps = 2/309 (0%) Strand = Plus / Plus Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 ||||||||| | ||||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 437 aataaagagtcagccgggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 494 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 495 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 554 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 ctatgactacataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 614 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 |||||||| ||| ||||||| || | || |||||||||||||||||||||||| Sbjct: 615 aacaaaccaaaaaaattgctttatttgataggattctaaattaacaaataagacaggaaa 674 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 675 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 734 Query: 372 gagtaaaaa 380 || |||||| Sbjct: 735 gaataaaaa 743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| ||||||||||||| Sbjct: 796 tggatatattctagatcttctttcttgactatatatt 832
>gb|U62791.1|CJU62791 Chusquea juergensii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1059 Score = 351 bits (177), Expect = 1e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 408 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 467 Query: 109 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 166 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 468 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 527 Query: 167 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 226 ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 528 ggagaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcct 587 Query: 227 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 285 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 588 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 647 Query: 286 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 648 ataatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 700 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 705 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 761 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 762 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 821 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 822 gactatatatt 832
>gb|U54756.1|CPU54756 Chusquea pinifolia ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1038 Score = 351 bits (177), Expect = 1e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 408 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 467 Query: 109 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 166 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 468 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 527 Query: 167 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 226 ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 528 ggagaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcct 587 Query: 227 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 285 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 588 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 647 Query: 286 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 648 ataatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 700 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 705 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 761 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 762 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 821 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 822 gactatatatt 832
>gb|AY847107.1| Zeugites hackelii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1073 Score = 349 bits (176), Expect = 5e-93 Identities = 268/301 (89%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||||||| Sbjct: 398 aaatcgtaacttgaaacaataaataaaaatttcaagcaataaaaaagagcagcccgggtt 457 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 458 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 517 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 518 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactggataggatttt 577 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 578 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 637 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 638 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 697 Query: 332 a 332 | Sbjct: 698 a 698
>gb|AY847083.1| Paspalum conjugatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1157 Score = 349 bits (176), Expect = 5e-93 Identities = 305/352 (86%), Gaps = 10/352 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || ||||| ||||||||| ||||||| ||||||||| Sbjct: 392 aaatcgtaacttgaaacaacaaataaaaattgaaagcaataaaaaagagcagcccgggtt 451 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||| |||||||| |||||||| |||| ||||||| Sbjct: 452 aataaaactgagaaaattgactcggaaagcaatttttttgaagctccattgcaggattca 511 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||| ||||| |||||||||| |||||||||||| ||||||||| | ||||||||||| Sbjct: 512 aacctagccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttt 571 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||||||||||||||||||||||||||| |||||| ||| Sbjct: 572 attgaaaagaatcctaacacttcattgggtgggatggcggagcaaaccaaaaaaattgct 631 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ttatttgataaggttctaaattaacaaataagacaggaaagagtaaatattcgcccgcga 691 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataa 383 ||| |||| |||||||||| ||||||||||||| ||||||||| Sbjct: 692 aatcctta----------atactttaccacgattcaataagaataaaaataa 733 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 |||||||| |||||||||||||| ||||||||||||| Sbjct: 776 tggatatactctagatcttctttcttgactatatatt 812
>gb|AY847078.1| Eragrostis curvula ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1163 Score = 349 bits (176), Expect = 5e-93 Identities = 295/337 (87%), Gaps = 10/337 (2%) Strand = Plus / Plus Query: 58 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 117 |||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 425 aaatttaaagcaataataaagagcagcccgggttaataaaactgagagaattaactcgga 484 Query: 118 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 177 ||| |||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 485 aag------tttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 538 Query: 178 gggaacgacagaacctatgattccataggattt----tattgaaaagaatcctaacactt 233 |||||||||| || |||||| | |||||||||| |||||||||||||||||| |||| Sbjct: 539 gggaacgacaaaagctatgactgcataggatttattttattgaaaagaatcctaatactt 598 Query: 234 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatt 293 |||||||||||||||||||||||||| ||| ||||||| |||| ||||||||| Sbjct: 599 cattgggtgggatggcggaacaaaccaaaaaaattgctttatttgttaaggttataaatt 658 Query: 294 aacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatac 353 ||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| |||||| Sbjct: 659 aacaaataagacaagaaagagtaaatattcgcccgcgaaatccttattggattcgaatac 718 Query: 354 tttaccgcgattcaataagagtaaaaataaggatatt 390 ||||| ||||||||||| ||||||||||||||||| Sbjct: 719 tttactatgattcaataagggtaaaaataaggatatt 755 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||| ||| ||||||||||||| Sbjct: 795 tggatatattctagatcttttttcttgactatatatt 831
>gb|AF133480.1|AF133480 Zoysia matrella ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1204 Score = 347 bits (175), Expect = 2e-92 Identities = 296/337 (87%), Gaps = 5/337 (1%) Strand = Plus / Plus Query: 58 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 117 |||||| ||| ||||| ||||||| ||||| ||||||||||||||||||||| ||||||| Sbjct: 451 aaatttaaagaaataaaaaagagcagcccgcgttaataaaactgagaaaattgactcgga 510 Query: 118 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 177 ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 511 aagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 570 Query: 178 gggaacgacagaacctatgattccataggatt----ttattgaaaagaatcctaacactt 233 |||||||||| ||||||||| | ||||||||| ||||||||||||||||||| |||| Sbjct: 571 gggaacgacaaaacctatgactgcataggattgattttattgaaaagaatcctaatactt 630 Query: 234 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatt 293 |||||||||||||||||||||||||| ||| |||||||||||| ||||||||| Sbjct: 631 cattgggtgggatggcggaacaaaccaaaaaaattgctttatttggtaaggttataaatt 690 Query: 294 aacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatac 353 ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 691 aacaaataagacaagaaagagtaaatattcgcccgcgaaatctttattggattagaatag 750 Query: 354 tttaccgcgattcaataagagtaaaaataaggatatt 390 ||||| ||| || || |||| |||||||||||||| Sbjct: 751 tttactatgatcca-taggagtcaaaataaggatatt 786 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 455 atatattctagatcttcttttttgactatatatt 488 |||||||| ||||||||||| || |||||||||| Sbjct: 839 atatattccagatcttctttctttactatatatt 872
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 345 bits (174), Expect = 8e-92 Identities = 314/363 (86%), Gaps = 10/363 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| |||| |||||| || || || |||||| ||||||||||||||||| |||||| || Sbjct: 388 aaatcgtaatttgaaacaataaataaaaatttaaagcaataataaagagcagcccggatt 447 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||||||||| |||| |||||||||||| |||| ||||||| Sbjct: 448 aataaaactgagaaaattaactcgaaaag------tttggaagctccattgcaggattca 501 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatag----ga 207 ||||||||||| |||||||||| |||||||||||| ||||||||| | ||||| || Sbjct: 502 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgcataggattga 561 Query: 208 ttttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnt 267 ||||||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct: 562 ttttattgaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaat 621 Query: 268 tgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgccc 327 || |||||||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 622 tgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgccc 681 Query: 328 gcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaataaggat 387 ||||||| |||||| ||||||||||||||| ||||||||||| |||||| |||||| Sbjct: 682 gcgaaatctttattggattagaatactttactatgattcaataaggttaaaaaaaaggat 741 Query: 388 att 390 ||| Sbjct: 742 att 744
>gb|U62783.1|CSU62783 Chusquea sp. B ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 343 bits (173), Expect = 3e-91 Identities = 253/282 (89%), Gaps = 5/282 (1%) Strand = Plus / Plus Query: 58 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 117 |||||| |||| |||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 413 aaatttgaagccataataaagagcggcccgggttaataaaactgagaaaatttactcgga 472 Query: 118 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 177 ||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| | | Sbjct: 473 aagaaattttttggaagctccattgtgggattcagacctaaccattaaaggagaagtaat 532 Query: 178 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 237 |||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||| Sbjct: 533 gggaacgacagaacctatgactgcataggatttttttgaaaagaatcctaatacttcatt 592 Query: 238 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt-----tataaat 292 |||||||||||||||||||||| | | ||||||||||||| | ||||||| Sbjct: 593 gggtgggatggcggaacaaaccaaaaaaatggccttatttggtaaggttataatataaat 652 Query: 293 taacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 653 taacaaataagacaggaaagagtaaacattcgcccgcgaaat 694 Score = 123 bits (62), Expect = 6e-25 Identities = 114/130 (87%), Gaps = 6/130 (4%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt---agaaggactacattattatctata 418 ||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| Sbjct: 699 gattcaataagagtaaaaataaggatattttttttaagaaagattac---attatctata 755 Query: 419 aatatagaatttagataaatatccacacacatctggatatattctagatcttcttttttg 478 |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 756 aatatataatacggataaatagacacacacatctagatatattctagatcttctttcttg 815 Query: 479 actatatatt 488 |||||||||| Sbjct: 816 actatatatt 825
>gb|U54755.1|CWU54755 Chusquea windischii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1034 Score = 343 bits (173), Expect = 3e-91 Identities = 262/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 166 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 464 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 523 Query: 167 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 226 ||||||| ||||||||||||||||||||||| | | ||||||||| |||||||||||||| Sbjct: 524 ggagaagtagtgggaacgacagaacctatgactgcctaggatttttttgaaaagaatcct 583 Query: 227 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 285 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 643 Query: 286 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 644 ataatataaattaacaaataagacaggaaagagtaaacattcgcccgcgaaat 696 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 701 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 757 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 758 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 817 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 818 gactatatatt 828
>gb|AY847103.1| Pohlidium petiolatum rpl16 gene, intron; chloroplast Length = 1018 Score = 339 bits (171), Expect = 5e-90 Identities = 260/292 (89%) Strand = Plus / Plus Query: 58 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 117 |||||| ||||||||| ||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 372 aaatttcaagcaataaaaaagagcagccccggttaataaaactgagaaaattgactcgga 431 Query: 118 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 177 ||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| || Sbjct: 432 aagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgt 491 Query: 178 gggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttcatt 237 |||||||||| ||||||||| | |||||||||| |||||||||||||||| |||||||| Sbjct: 492 gggaacgacaaaacctatgactggataggatttttttgaaaagaatcctaatacttcatt 551 Query: 238 gggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaaca 297 |||||||||||||||||||||| | | |||||||||||| ||||||||||||| Sbjct: 552 gggtgggatggcggaacaaaccaaaaaaatggctttatttggtaaggttataaattaaca 611 Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattaga 349 ||||||||||||||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 612 aataagacaggaaagggtaaacattcgcccgcgaaatctttattggattaga 663
>gb|AY847109.1| Zeugites munroanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 952 Score = 335 bits (169), Expect = 8e-89 Identities = 279/318 (87%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||| ||| Sbjct: 276 aaatcgtaacttgaaacaataaataaaaatttcaagcaataaaaaagagcagcccgagtt 335 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 336 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 395 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 396 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactagataggatttt 455 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 || |||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 456 atggaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 515 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||| |||||||||||||| |||| ||||||| Sbjct: 516 ttatttggtaaggttataaattaacaaataaggcaggaaagagtaaacattcccccgcga 575 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 576 aatctttattggattaga 593
>gb|AY847108.1| Zeugites mexicanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1056 Score = 335 bits (169), Expect = 8e-89 Identities = 279/318 (87%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||| ||| Sbjct: 386 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcccgagtt 445 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||| Sbjct: 446 aataaaactgagaaaattgacccggaaagaaattttttggaagctccattgcaggattca 505 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 506 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactggataggatttt 565 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 || |||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 566 atggaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 625 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 626 ttatttggtaaggttataaattaacaaataaggcaggaaagagtaaacattcgcccgcga 685 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 686 aatctttattggattaga 703
>gb|AY847094.1| Centotheca lappacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 815 Score = 335 bits (169), Expect = 8e-89 Identities = 307/355 (86%), Gaps = 9/355 (2%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||| ||| || || || |||||| |||| ||| ||||||| ||| ||||| Sbjct: 52 aaatcgtaacttcaaacaataaataaaaatttaaagcggtaaaaaagagcagccggggtt 111 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| | ||||||| |||||||||||||||||| |||| ||||||| Sbjct: 112 aataaaactgagaaaattgattcggaaataaattttttggaagctccattgcaggattca 171 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||||| ||| ||||| | ||||||||||| Sbjct: 172 aacctaaccattaaaggagaagctgtgggaacgacaaaacttatgactgcataggatttt 231 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| ||||||||||| |||||||||||||||||| ||| Sbjct: 232 attgaaaagaatcctaatacttcattgggcgggatggcggaacaaaccaaaaaaattgct 291 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 ttatttggtaaggttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 351 Query: 332 aattcttattgaattagaatactttaccgcgattcaataagagtaaaaataagga 386 | || |||||||||||||| | ||||||||||||| |||||||||||| Sbjct: 352 a--------tggattagaatacttta-cacgattcaataagaataaaaataagga 397 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| |||||||| |||| Sbjct: 438 tggatatattctagatcttctttattgactatctatt 474
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 335 bits (169), Expect = 8e-89 Identities = 285/326 (87%), Gaps = 10/326 (3%) Strand = Plus / Plus Query: 58 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 117 |||||| ||||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct: 447 aaatttgaagcaataataaagagcagcccaggttaataaaactaagaaaattaactcgga 506 Query: 118 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 177 ||| ||||||| ||||||||| ||||||| ||||||||||| |||||||||| || Sbjct: 507 aag------tttggaaactccgttgcaggattcaaacctaaccattaaaggagaagctgt 560 Query: 178 gggaacgacagaacctatgattccataggatt----ttattgaaaagaatcctaacactt 233 |||||||||| ||||||||| | ||||||||| ||||||||||||||||||| |||| Sbjct: 561 gggaacgacaaaacctatgactgcataggattgattttattgaaaagaatcctaatactt 620 Query: 234 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaatt 293 ||||||| |||||||||||||||||| |||||||||||| |||| ||||||||| Sbjct: 621 cattgggcgggatggcggaacaaaccaaaaaaattgtcttatttgataaggttataaatt 680 Query: 294 aacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatac 353 ||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 681 aacaaataagacaagaaagagtaaatattcgcccgcgaaatctttattggattagaatac 740 Query: 354 tttaccgcgattcaataagagtaaaa 379 ||||| ||||||||||| |||||| Sbjct: 741 tttactatgattcaataagggtaaaa 766 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| || |||||||||| Sbjct: 820 tggatatattctagatcttctttctttactatatatt 856
>gb|AY847110.1| Zeugites pringlei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1060 Score = 327 bits (165), Expect = 2e-86 Identities = 278/318 (87%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||| ||| Sbjct: 390 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcccgagtt 449 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||| Sbjct: 450 aataaaactgagaaaattgacccggaaagaaattttttggaagctccattgcaggattca 509 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 510 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactggataggatttt 569 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 || |||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 570 atggaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 629 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 630 ttatttggtaagattttaaattaacaaataaggcaggaaagagtaaacattcgcccgcga 689 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 690 aatctttattggattaga 707
>gb|AF133491.1|AF133491 Joinvillea ascendens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1229 Score = 327 bits (165), Expect = 2e-86 Identities = 281/319 (88%), Gaps = 6/319 (1%) Strand = Plus / Plus Query: 68 caataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaatttt 127 |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 439 caataataaagagcaccctgggttaataaaactgagaaaattgactcggaaagaaatttt 498 Query: 128 tt-ggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 || ||||||||| ||||||| |||||||||||||||| | |||||||| ||||||||||| Sbjct: 499 tttggaagctccattgcggggttcagacctaaccattaatggagaagctgtgggaacgac 558 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 ||||||||||| | ||||||||| ||||||||| ||||||||| | |||||||||||||| Sbjct: 559 agaacctatgactgcataggattctattgaaaacgaatcctaagaattcattgggtggga 618 Query: 246 tggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaa----caaata 301 |||||||||||||| ||||||||||||||||| |||| |||| | | |||| Sbjct: 619 tggcggaacaaaccaagaaaattgtcttatttggtaaggttatgaattgaacctcgaata 678 Query: 302 agacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgc 361 ||||||||||||||||||||||||||||||||| |||||| |||| |||| ||| |||| Sbjct: 679 agacaggaaagagtaaatattcgcccgcgaaatctttattggattacaatattttgccgc 738 Query: 362 gattcaataagagtaaaaa 380 ||||| ||||||||||||| Sbjct: 739 gattcgataagagtaaaaa 757
>gb|AY912198.1| Guadua angustifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1079 Score = 323 bits (163), Expect = 3e-85 Identities = 240/268 (89%), Gaps = 5/268 (1%) Strand = Plus / Plus Query: 44 gaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgag 103 |||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 292 gaaacaagaaatacaaatttgaagcaataataaagagcggcccgggttaataaaactgag 351 Query: 104 aaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccatt 163 |||||| ||| |||||||||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 352 aaaattgacttggaaagaaattttttggaagctccattgtggaattcagacctaaccatt 411 Query: 164 caaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaat 223 ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 412 aaaggagaagtagtgggaacgacagaacctatgactgcataggattttattgaaaagaat 471 Query: 224 cctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaag 283 ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 472 cctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaag 531 Query: 284 tt-----tataaattaacaaataagaca 306 | ||||||||||||||||||||| Sbjct: 532 gttctaatataaattaacaaataagaca 559 Score = 180 bits (91), Expect = 3e-42 Identities = 140/156 (89%), Gaps = 9/156 (5%) Strand = Plus / Plus Query: 339 attgaattagaatactttaccgcgattcaataagagtaaaaataaggatatttttt---- 394 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 562 attgaattagaatactttaccgcgattcaataagagtaaaaataaggagatttttttttt 621 Query: 395 --agaaggactacattattatctataaatatagaatttagataaatatccacacacatct 452 ||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||| Sbjct: 622 taagaaggattacattat---ctataaatatagaatatagataaatagacacacacatct 678 Query: 453 ggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||| ||||||||||||| Sbjct: 679 agatatattctagatcttctttcttgactatatatt 714
>gb|AF133478.1|AF133478 Sorghum bicolor ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1200 Score = 323 bits (163), Expect = 3e-85 Identities = 258/293 (88%), Gaps = 8/293 (2%) Strand = Plus / Plus Query: 88 ggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggga 147 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| Sbjct: 478 ggttaataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcagga 537 Query: 148 ttcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagga 207 |||| ||||||||||| |||||||||| |||||||||||| | ||||||| | ||||||| Sbjct: 538 ttcaaacctaaccattaaaggagaagctgtgggaacgacaaagcctatgactacatagga 597 Query: 208 ttttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnt 267 |||||||| ||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 598 ttttattggaaagaatcctaactcttcattgggtgggatggcggaacaaaccaaaaaatt 657 Query: 268 tgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgccc 327 || ||||||| |||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 658 tgctttatttgataaggttctaaattaacaaataagacaggaaagagtaaatattcgccc 717 Query: 328 gcgaaattcttattgaattagaatactttaccgcgattcaataagagtaaaaa 380 ||||||| | ||||||||||||||| ||||||||||||| |||||| Sbjct: 718 gcgaaatcc--------ttagaatactttaccacgattcaataagaataaaaa 762 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 454 gatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||| ||||||||||||| Sbjct: 815 gatatattctagatcttctttcttgactatatatt 849
>gb|AY847105.1| Zeugites americanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 944 Score = 319 bits (161), Expect = 5e-84 Identities = 278/318 (87%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || |||||| ||||||||| ||||||| ||||| ||| Sbjct: 276 aaatcgtaacttgaaacaataaataaaaatttaaagcaataaaaaagagcagcccgagtt 335 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||| Sbjct: 336 aataaaactgagaaaattgacccggaaagaaattttttggaagctccattgcaggattca 395 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||| | ||||||||| | |||||||||| Sbjct: 396 aacctaaccattaaaggagaagctgtgggaacgaaaaaacctatgactggataggatttt 455 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 || |||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct: 456 atggaaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaatggct 515 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| ||||||| ||||||||||| |||||||||||||| |||||||||||| Sbjct: 516 ttatttggtaaggttataaa-taacaaataaggcaggaaagagtaaacattcgcccgcga 574 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 575 aatctttattggattaga 592
>gb|AF133490.1|AF133490 Streptochaeta angustifolia ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1243 Score = 319 bits (161), Expect = 5e-84 Identities = 288/330 (87%), Gaps = 7/330 (2%) Strand = Plus / Plus Query: 69 aataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaatttt- 127 ||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| Sbjct: 478 aataataaagagcaacctgggttaataaaactgagaaaatggactcggaaagaaattttg 537 Query: 128 ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgaca 187 ||||||||||| |||| || |||||||||||||||| |||||||| |||||||||||| Sbjct: 538 ttggaagctccattgcagggttcagacctaaccattagtggagaagctgtgggaacgaca 597 Query: 188 gaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggat 246 |||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 598 gaacctatgactacataggattttattgaaaacgaatcctaatacttcattgggtgggat 657 Query: 247 ggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagaca 306 ||||||||||||| ||| |||||||||||| || | |||| || ||||||||| Sbjct: 658 ggcggaacaaaccaaaaaaattgctttatttggtaaggttttgaattgacgaataagaca 717 Query: 307 ggaaagagtaaatattcgcccgcgaaattcttattgaattagaa-----tactttaccgc 361 |||||||||||||||||||||||||||| |||||| |||| || |||||||||| Sbjct: 718 ggaaagagtaaatattcgcccgcgaaatctttattggattacaatactttactttaccgt 777 Query: 362 gattcaataagagtaaaaataaggatattt 391 ||||||||||||||||||||||||| |||| Sbjct: 778 gattcaataagagtaaaaataaggagattt 807 Score = 44.1 bits (22), Expect = 0.43 Identities = 49/58 (84%) Strand = Plus / Plus Query: 430 tagataaatatccacacacatctggatatattctagatcttcttttttgactatatat 487 |||||||||| |||| |||||| |||| ||| || |||||||| |||||||||||| Sbjct: 844 tagataaatagacacagacatctagatagattttatctcttctttcttgactatatat 901
>gb|U62792.1|CNU62792 Chusquea nudiramea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1034 Score = 319 bits (161), Expect = 5e-84 Identities = 259/293 (88%), Gaps = 7/293 (2%) Strand = Plus / Plus Query: 49 aagaactacaaattttaagcaataataaagagccgcccgggttaataaaactgagaaaat 108 ||||| || |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 404 aagaaataaaaatttgaagcaataataaagagcggcccgggttaataaaactgagaaaat 463 Query: 109 ta--actcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaa 166 | |||||||||||||||||||||||||||| ||| |||||||||||||||||||| || Sbjct: 464 ttttactcggaaagaaattttttggaagctccattgtgggattcagacctaaccattaaa 523 Query: 167 ggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatcct 226 ||||||| ||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct: 524 ggagaagtagtgggaacgacagaacctatgactgcataggatttttttgaaaagaatcct 583 Query: 227 aacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggtaagtt- 285 || |||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 584 aatacttcattgggtgggatggcggaacaaaccaaaaaaattgccttatttggtaaggtt 643 Query: 286 ----tataaattaacaaataagacaggaaagagtaaatattcgcccgcgaaat 334 |||||||| |||| ||||||||| ||||||| | ||||||||||||||| Sbjct: 644 ataatataaattgacaattaagacaggcaagagtatacattcgcccgcgaaat 696 Score = 111 bits (56), Expect = 2e-21 Identities = 113/131 (86%), Gaps = 7/131 (5%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatttttt----agaaggactacattattatctat 417 ||||||||||||||||||||||||| ||||||| |||| || |||||||| |||| Sbjct: 701 gattcaataagagtaaaaataaggagatttttttttaagaaagattacattat---ctat 757 Query: 418 aaatatagaatttagataaatatccacacacatctggatatattctagatcttctttttt 477 ||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| || Sbjct: 758 aaatatataatacggataaatagacacacacatctagatatattctagatcttctttctt 817 Query: 478 gactatatatt 488 ||||||||||| Sbjct: 818 gactatatatt 828
>gb|AF133479.1|AF133479 Eleusine indica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1091 Score = 307 bits (155), Expect = 2e-80 Identities = 286/332 (86%), Gaps = 10/332 (3%) Strand = Plus / Plus Query: 58 aaattttaagcaataataaagagccgcccgggttaataaaactgagaaaattaactcgga 117 |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| Sbjct: 451 aaattttaagcaataataaagagcagcccaggttaataaaactaagaaaattaactcgga 510 Query: 118 aagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagt 177 ||| ||||||||||||||||| ||||||| ||||||||||| |||||||||| || Sbjct: 511 aagtttaagtttggaagctccgttgcaggattcaaacctaaccattaaaggagaagctgt 570 Query: 178 gggaacgacagaacctatgattccatag----gattttattgaaaagaatcctaacactt 233 |||||||||| ||||||||| | ||||| ||||||||||||||||||||||| |||| Sbjct: 571 gggaacgacaaaacctatgactgcataggattgattttattgaaaagaatcctaatactt 630 Query: 234 cattgggtgggatggcggaacaaaccnnnnnnnttgtcttatttggt------aagttta 287 ||||||| |||||||||||||||||| |||| ||||||| | ||| ||| Sbjct: 631 cattgggcgggatggcggaacaaaccaaaaaaattgttttatttgattttaataaggtta 690 Query: 288 taaattaacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaatta 347 ||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||| Sbjct: 691 taaattaacaaataagacaagaaagagtaaatattcgcccgcgaaatctttattggatta 750 Query: 348 gaatactttaccgcgattcaataagagtaaaa 379 ||||||||||| ||||||||||| |||||| Sbjct: 751 gaatactttactatgattcaataagggtaaaa 782 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 453 ggatatattctagatcttcttttttgactatatatt 488 |||||||||||||||||||||| ||||||||||||| Sbjct: 839 ggatatattctagatcttctttcttgactatatatt 874
>gb|AF133464.1|AF133464 Lithachne pauciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1189 Score = 307 bits (155), Expect = 2e-80 Identities = 301/351 (85%), Gaps = 7/351 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaata-----ataaagagccgccc 86 |||| ||||||||||| ||||| || ||||||||||||||| |||| |||| | Sbjct: 408 aaatcgtaacttgaaacaagaaatataaattttaagcaatacaataataaggagcaactg 467 Query: 87 gggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcggg 146 ||||||||||||||||||||||| |||| |||||| ||||||||||| |||| ||| || Sbjct: 468 gggttaataaaactgagaaaattgactcagaaagatattttttggaaactccattgtgga 527 Query: 147 attcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg 206 ||||||||||||||||| ||||||||| ||||||||||| ||||||||||| | |||| Sbjct: 528 attcagacctaaccattaaaggagaagtagtgggaacgatagaacctatgactgtataga 587 Query: 207 attttattgaaaagaatcctaacacttcatt--gggtgggatggcggaacaaaccnnnnn 264 ||||| ||||||||||| |||| ||||||| ||| |||||||||||||||||| Sbjct: 588 atttttttgaaaagaattctaattcttcattaggggagggatggcggaacaaaccaaaaa 647 Query: 265 nnttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcg 324 ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 648 aattgtcttatttagtaaggttataaattaacaaataagataggaaagagtaaatattcg 707 Query: 325 cccgcgaaattcttattgaattagaatactttaccgcgattcaataagagt 375 |||||||||| ||||||||| | ||| ||||||| |||||||||||||||| Sbjct: 708 cccgcgaaatccttattgaagtggaaaactttactgcgattcaataagagt 758 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 445 acacatctggatatattctagatcttcttttttgactatatatt 488 |||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 802 acacatctagatatattctagatcttttttcttgactatatatt 845
>gb|AY847101.1| Orthoclada laxa ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1068 Score = 301 bits (152), Expect = 1e-78 Identities = 278/322 (86%), Gaps = 4/322 (1%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||| ||||||| || || | ||||||| ||||||||| ||||||| ||||||||| Sbjct: 395 aaatcgtaccttgaaacaataaatccaaatttaaagcaataaaaaagagcagcccgggtt 454 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 ||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||| Sbjct: 455 aataaaactgagaaaatgggctcggaaagaaattttttggaagctccattgcagaattca 514 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccatagg----a 207 |||||||||| |||||||||| |||||||||||| ||||||||| | ||||| | Sbjct: 515 atcctaaccattaaaggagaagctgtgggaacgacaaaacctatgactggataggattta 574 Query: 208 ttttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnt 267 ||||||||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct: 575 ttttattgaaaagaatcctaatatttcattgggtgggatggcggaacaaaccaaaaaaat 634 Query: 268 tgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgccc 327 | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 635 ggctttatttggtaaggttataaattaacaaataagacaggaaagagtaaacattcgccc 694 Query: 328 gcgaaattcttattgaattaga 349 ||||||| |||||| |||||| Sbjct: 695 gcgaaatctttattggattaga 716
>gb|AY847104.1| Zeugites sylvaticus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1051 Score = 293 bits (148), Expect = 3e-76 Identities = 208/228 (91%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||| ||||||||||| || || || ||||| ||||||||| ||||||| ||||||||| Sbjct: 370 aaatcgtaacttgaaacaataaataaaaattgcaagcaataaaaaagagcagcccgggtt 429 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 430 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 489 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 ||||||||||| |||||||||| |||||||||||| ||||||||| | |||||||||| Sbjct: 490 aacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactggataggatttt 549 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaacc 259 ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 550 attgaaaagaatcctaatacttcattgggtgggatggcggaacaaacc 597 Score = 107 bits (54), Expect = 3e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| | Sbjct: 609 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcta 668 Query: 332 aattcttattgaattaga 349 |||| |||||| |||||| Sbjct: 669 aatttttattggattaga 686
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 285 bits (144), Expect = 7e-74 Identities = 237/268 (88%), Gaps = 3/268 (1%) Strand = Plus / Plus Query: 38 taacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaa 97 |||||||||| || || || |||||| ||||||||||||||||| || |||||||||||| Sbjct: 403 taacttgaaacaaaaaataaaaatttaaagcaataataaagagcagctcgggttaataaa 462 Query: 98 actgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagaccta 157 |||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 463 actgagaaaattgactcggaaagaaattttttggaagctccattgcaggattcaaaccta 522 Query: 158 accattcaaggagaagcagtgggaacgacagaacctatgattccatagga--ttttattg 215 |||||| |||||||||| |||||||||||| ||||||||| | ||||||| |||| ||| Sbjct: 523 accattaaaggagaagctgtgggaacgacaaaacctatgactgcataggatttttttttg 582 Query: 216 aaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtcttat 275 ||||||||||||| |||||||||||||||||||||||||||||| ||| |||| Sbjct: 583 aaaagaatcctaatacttcattgggtgggatggcggaacaaaccaaaaaaattgctttat 642 Query: 276 ttggtaagtttataaattaacaaataag 303 ||||| || ||||||||||||||||||| Sbjct: 643 ttggt-agattataaattaacaaataag 669 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 338 tattgaattagaatactttaccgcgattcaataagagtaaaaa 380 ||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 670 tattggattagaatactttaccacgattcaataagagtaaaaa 712
>gb|AY847111.1| Zeugites sagittatus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1018 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Plus Query: 22 agagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagc 81 ||||||| | |||| ||||||||||| || || | ||||| ||||||||| ||||||| Sbjct: 333 agagaattagaaatcgtaacttgaaacaataaaaaaaaattgcaagcaataaaaaagagc 392 Query: 82 cgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgtt 141 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 393 agcccgggttaataaaactgagaaaattgactcggaaagaaattttttggaagctccatt 452 Query: 142 gcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattcc 201 || ||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| | Sbjct: 453 gcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgg 512 Query: 202 ataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaacc 259 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 513 ataggattttattgaaaagaatcctaatacttcattgggggggatggcggaacaaacc 570 Score = 107 bits (54), Expect = 3e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 582 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 641 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 642 aatctttattggattaga 659
>gb|AY847102.1| Lophatherum gracile ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1078 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Plus Query: 22 agagaatgaaaaattgtaacttgaaagaagaactacaaattttaagcaataataaagagc 81 ||||||| | |||| ||||||||||| || || | ||||| ||||||||| ||||||| Sbjct: 393 agagaattagaaatcgtaacttgaaacaataaaaaaaaattgcaagcaataaaaaagagc 452 Query: 82 cgcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagctccgtt 141 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 453 agcccgggttaataaaactgagaaaattgactcggaaagaaattttttggaagctccatt 512 Query: 142 gcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacctatgattcc 201 || ||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| | Sbjct: 513 gcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaacctatgactgg 572 Query: 202 ataggattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaacc 259 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 573 ataggattttattgaaaagaatcctaatacttcattgggggggatggcggaacaaacc 630 Score = 107 bits (54), Expect = 3e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 642 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 701 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 702 aatctttattggattaga 719
>gb|AY847113.1| Micraira lazaridis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 757 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 65 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 90 aagcattaataaagagtagcccgggttaataaaactgagaaaattgactcggaaataaat 149 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 |||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 150 tttttggaagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacg 209 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 ||| ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 210 acaaaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtggg 269 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataa 302 ||||||||||||||| ||| |||||||||||| |||||||||||||||||| Sbjct: 270 atggcggaacaaacc-aaaaaattgctttatttggtaag-ttataaattaacaaataa 325 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| || |||||||||| Sbjct: 418 tggatatattctagatcttctttctttactatatatt 454 Score = 52.0 bits (26), Expect = 0.002 Identities = 49/54 (90%), Gaps = 2/54 (3%) Strand = Plus / Plus Query: 338 tattgaattagaatactttaccgcgattcaata-agagtaaaaataaggatatt 390 ||||| |||||||||||||||| ||||| |||| ||||||||||||||| |||| Sbjct: 326 tattgtattagaatactttaccacgatt-aatatagagtaaaaataagggtatt 378
>gb|AY847098.1| Chasmanthium latifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1132 Score = 274 bits (138), Expect = 3e-70 Identities = 273/318 (85%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 32 aaattgtaacttgaaagaagaactacaaattttaagcaataataaagagccgcccgggtt 91 |||||||||||||||| || || || ||||| ||||||||| ||||||| ||| ||||| Sbjct: 365 aaattgtaacttgaaacaataaataaaaattgaaagcaataaaaaagagcagcctgggtt 424 Query: 92 aataaaactgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattca 151 |||||||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| Sbjct: 425 aataaaactgagaaaattgactcggaaagaaattttttggaagctccattgcaggattca 484 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||| |||||||||| |||||||||| | ||||||||| | ||||||||||| Sbjct: 485 aacctaaccatgaaaggagaagctgtgggaacgagaaaacctatgactgcataggatttt 544 Query: 212 attgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnnnttgtc 271 ||||||||||||||||| ||||||||||||||||||||||| | | || ||| Sbjct: 545 attgaaaagaatcctaatacttcattgggtgggatggcggacctagccaaaaaaattgct 604 Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||| |||| |||| | ||| || | |||||||||||||||||||| Sbjct: 605 ttatttggtaaggttatcaatt-acaa--aggactggcatgagtaaatattcgcccgcga 661 Query: 332 aattcttattgaattaga 349 ||| |||||| |||||| Sbjct: 662 aatctttattggattaga 679 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactat 483 ||||||||||||||||||||||| |||||||| Sbjct: 754 tggatatattctagatcttctttcttgactat 785
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 80530 aataaagagcagcc-gggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 80474 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 80473 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 80414 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 |||||| | ||||||| ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 80413 ctatgactacatagga-tttattg-aaagaatcctaacacttcattgg--tggatggcgg 80358 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 ||||||| ||| ||||||| |||| || |||||||||||||||||||||||| Sbjct: 80357 -acaaacc-acaaaattgctttatttgataaggttctaaattaacaaataagacaggaaa 80300 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 80299 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 80240 Query: 372 gagtaaaaa 380 || |||||| Sbjct: 80239 gaataaaaa 80231 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| ||||||||||||| Sbjct: 80179 tggatatattctagatcttctttcttgactatatatt 80143
>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA Length = 1368 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Plus Query: 72 aataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaattttttgg 131 |||||||||| ||| ||||||||||||||||||||||| ||||||||| ||| || || Sbjct: 47 aataaagagcagcc-gggttaataaaactgagaaaattgactcggaaaaaaaaatt--gg 103 Query: 132 aagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaac 191 ||||||| |||| ||||||| ||||||||||| |||||||||| |||||||||||| ||| Sbjct: 104 aagctccattgcaggattcaaacctaaccattaaaggagaagctgtgggaacgacaaaac 163 Query: 192 ctatgattccataggattttattgaaaagaatcctaacacttcattgggtgggatggcgg 251 |||||| | |||||||||| ||||||| |||||||||||||||||||| ||||||||| Sbjct: 164 ctatgactacataggattt-attgaaa-gaatcctaacacttcattggt--ggatggcgg 219 Query: 252 aacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaataagacaggaaa 311 | |||||| ||| ||||||| |||| || |||||||||||||||||||||||| Sbjct: 220 a-caaaccacaaaa-ttgctttatttgataaggttctaaattaacaaataagacaggaaa 277 Query: 312 gagtaaatattcgcccgcgaaattcttattgaattagaatactttaccgcgattcaataa 371 ||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||| Sbjct: 278 gagtaaatattcgcccgcgaaatccttattggattagaatactttaccacgattcaataa 337 Query: 372 gagtaaaaa 380 || |||||| Sbjct: 338 gaataaaaa 346 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactatatatt 488 ||||||||||||||||||||||| ||||||||||||| Sbjct: 398 tggatatattctagatcttctttcttgactatatatt 434
>gb|AY847106.1| Zeugites capillaris ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1062 Score = 270 bits (136), Expect = 4e-69 Identities = 199/220 (90%) Strand = Plus / Plus Query: 40 acttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaac 99 |||||||| || || || ||||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 404 acttgaaacaataaataaaaattgcaagcaataaaaaagagcagcccgggttaataaaac 463 Query: 100 tgagaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaac 159 |||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||| Sbjct: 464 tgagaaaattgactcggaaagaaattttttggaagctccattgcaggattcaagcctaac 523 Query: 160 cattcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaa 219 |||| |||||||||| |||||||||||| ||||||||| | |||||||||||||||||| Sbjct: 524 cattaaaggagaagctgtgggaacgacaaaacctatgactggataggattttattgaaaa 583 Query: 220 gaatcctaacacttcattgggtgggatggcggaacaaacc 259 |||||||| |||||||||||||||||||||||||||||| Sbjct: 584 aaatcctaatacttcattgggtgggatggcggaacaaacc 623 Score = 101 bits (51), Expect = 2e-18 Identities = 60/63 (95%) Strand = Plus / Plus Query: 272 ttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgcccgcga 331 |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 634 ttatttggtaaggttataaattaccaaataagacaggaaagagtaaacattcgcccgcga 693 Query: 332 aat 334 ||| Sbjct: 694 aat 696
>gb|AY847097.1| Chasmanthium curvifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 982 Score = 270 bits (136), Expect = 4e-69 Identities = 210/237 (88%) Strand = Plus / Plus Query: 65 aagcaataataaagagccgcccgggttaataaaactgagaaaattaactcggaaagaaat 124 ||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 424 aagcaataaaaaagagcagcctgggttaataaaactgagaaaattgactcggaaagaaat 483 Query: 125 tttttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacg 184 |||||||||||||| |||| ||||||| |||||||||| |||||||||| ||||||||| Sbjct: 484 tttttggaagctccattgcaggattcaaacctaaccatgaaaggagaagctgtgggaacg 543 Query: 185 acagaacctatgattccataggattttattgaaaagaatcctaacacttcattgggtggg 244 | | ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 544 agaaaacctatgactgcataggattttattgaaaagaatcctaatacttcattgggtggg 603 Query: 245 atggcggaacaaaccnnnnnnnttgtcttatttggtaagtttataaattaacaaata 301 |||||||||||| || ||| ||||||||| || ||||||||||||||||| Sbjct: 604 atggcggaacaagccaaaaaaattgctttatttggttaggttataaattaacaaata 660 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 452 tggatatattctagatcttcttttttgactat 483 ||||||||||||||||||||||| |||||||| Sbjct: 719 tggatatattctagatcttctttcttgactat 750
>dbj|AP007101.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: SES205A, clone: SSE-79kb Length = 671 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007100.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Jw385, clone: SJw-79kb Length = 672 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007099.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Glagah, clone: SGl-79kb Length = 671 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007098.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: COL/PAPUA N.G/TARC/E12, clone: EPN-79kb Length = 666 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007097.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: IN95-009, clone: EIN-79kb Length = 666 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007096.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Ooshima, clone: SiO-79kb Length = 666 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007095.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Chunnee, clone: BCh-79kb Length = 666 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007094.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Tekcha, clone: SiTe-79kb Length = 666 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007093.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Kewali14, clone: BKe-79kb Length = 666 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007092.1| Saccharum robustum chloroplast gene for ribosomal protein L16, exon 2, partial sequence Length = 666 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007091.1| Saccharum robustum chloroplast gene for ribosomal protein L16, partial cds, strain: 6, clone: R6-79kb Length = 666 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007090.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Fiji40, clone: OFi-79kb Length = 665 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>dbj|AP007089.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Badila, clone: OBa-79kb Length = 665 Score = 264 bits (133), Expect = 2e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Minus Query: 56 acaaattttaagcaataa-taaagagccgcccgggttaataaaactgagaaaattaactc 114 |||||| | ||||||||| |||||||| ||| ||||||||||||||||||||||| |||| Sbjct: 200 acaaatataaagcaataaataaagagcagcc-gggttaataaaactgagaaaattgactc 142 Query: 115 ggaaagaaattttttggaagctccgttgcgggattcagacctaaccattcaaggagaagc 174 |||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||| Sbjct: 141 ggaaagaaattttttggaagctccattgcaggattcaaacctaaccattaaaggagaagc 82 Query: 175 agtgggaacgacagaacctatgattccataggattttattgaaaagaatcctaacacttc 234 |||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||||| Sbjct: 81 tgtgggaacgacaaaacctatgactacataggattttattggaaagaatcctaacacttc 22 Query: 235 attgggtgggatggcggaaca 255 ||||||||||||||||||||| Sbjct: 21 attgggtgggatggcggaaca 1
>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA Length = 1742 Score = 226 bits (114), Expect = 5e-56 Identities = 193/218 (88%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 155 ttgaaacaagaaatacaaatttcaaggaataacaaagagtgtcccgagttaataaaactg 214 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || ||| |||||||||||||||||||||||| ||| | |||| | ||||||||| Sbjct: 215 agaaa-ttgacttggaaagaaattttttggaagctccattgtgagattaaaacctaacca 273 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || |||||||||| |||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 274 ttaaaggagaagccgtgggaacgacagaacctatgactggataggattttcttgaaaaga 333 Query: 222 atcctaacacttcattgggtgggatggcggaacaaacc 259 |||| || |||||||||||||||||||||||||||||| Sbjct: 334 atcccaatacttcattgggtgggatggcggaacaaacc 371 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 293 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 352 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 392 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 451 Query: 353 ctttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||| Sbjct: 452 ctttaccgcgattcaataagagtaaaa 478 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 511 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 570 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 571 tgactatatatt 582
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 226 bits (114), Expect = 5e-56 Identities = 193/218 (88%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 42 ttgaaagaagaactacaaattttaagcaataataaagagccgcccgggttaataaaactg 101 |||||| ||||| ||||||||| ||| ||||| |||||| |||| ||||||||||||| Sbjct: 76602 ttgaaacaagaaatacaaatttcaaggaataacaaagagtgtcccgagttaataaaactg 76661 Query: 102 agaaaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaacca 161 ||||| || ||| |||||||||||||||||||||||| ||| | |||| | ||||||||| Sbjct: 76662 agaaa-ttgacttggaaagaaattttttggaagctccattgtgagattaaaacctaacca 76720 Query: 162 ttcaaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaaga 221 || |||||||||| |||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 76721 ttaaaggagaagccgtgggaacgacagaacctatgactggataggattttcttgaaaaga 76780 Query: 222 atcctaacacttcattgggtgggatggcggaacaaacc 259 |||| || |||||||||||||||||||||||||||||| Sbjct: 76781 atcccaatacttcattgggtgggatggcggaacaaacc 76818 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 293 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 352 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76839 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 76898 Query: 353 ctttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||| Sbjct: 76899 ctttaccgcgattcaataagagtaaaa 76925 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 76958 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 77017 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 77018 tgactatatatt 77029
>ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 105 aaattaactcggaaagaaattttttggaagctccgttgcgggattcagacctaaccattc 164 ||||| ||| |||||||||||||||||||||||| ||| | |||| | ||||||||||| Sbjct: 2 aaattgacttggaaagaaattttttggaagctccattgtgagattaaaacctaaccatta 61 Query: 165 aaggagaagcagtgggaacgacagaacctatgattccataggattttattgaaaagaatc 224 |||||||||| |||||||||||||||||||||| | |||||||||| |||||||||||| Sbjct: 62 aaggagaagccgtgggaacgacagaacctatgactggataggattttcttgaaaagaatc 121 Query: 225 ctaacacttcattgggtgggatggcggaacaaacc 259 | || |||||||||||||||||||||||||||||| Sbjct: 122 ccaatacttcattgggtgggatggcggaacaaacc 156 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Plus Query: 293 taacaaataagacaggaaagagtaaatattcgcccgcgaaattcttattgaattagaata 352 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 177 taacaaataagacaggaaagagtaaatattcgcccgcgaaatttttattgaattagaata 236 Query: 353 ctttaccgcgattcaataagagtaaaa 379 ||||||||||||||||||||||||||| Sbjct: 237 ctttaccgcgattcaataagagtaaaa 263 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||| ||||| | Sbjct: 296 taaatatagaatatagataaataaacatacacatctagatatattctagatcctctttct 355 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 356 tgactatatatt 367
>gb|AF276969.1| Spartina anglica ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 5e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 206 gattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnn 265 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 41 gattttattgaaaagaatcctaatacttcattggg-gggatggcggaacaaaccaaaaaa 99 Query: 266 nttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgc 325 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 attgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgc 159 Query: 326 ccgcgaaattcttattgaattagaatactttaccgcgattcaataag 372 ||||||||| |||||| ||||||||||||||| ||||||||||| Sbjct: 160 ccgcgaaatctttattggattagaatactttactatgattcaataag 206 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatt 390 ||||||||||| |||||||||||||||| Sbjct: 244 gattcaataaggttaaaaataaggatatt 272
>gb|AF276968.1| Spartina alterniflora ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 5e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Plus Query: 206 gattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnn 265 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 41 gattttattgaaaagaatcctaatacttcattggg-gggatggcggaacaaaccaaaaaa 99 Query: 266 nttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgc 325 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 attgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgc 159 Query: 326 ccgcgaaattcttattgaattagaatactttaccgcgattcaataag 372 ||||||||| |||||| ||||||||||||||| ||||||||||| Sbjct: 160 ccgcgaaatctttattggattagaatactttactatgattcaataag 206 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatt 390 ||||||||||| |||||||||||||||| Sbjct: 244 gattcaataaggttaaaaataaggatatt 272
>gb|AF133489.1|AF133489 Anomochloa marantoidea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 184 bits (93), Expect = 2e-43 Identities = 152/169 (89%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 93 ataaaactgagaaaattaactcggaaagaaatttt-ttggaagctccgttgcgggattca 151 |||||||||||||||| ||||||||| |||||| ||||||||||| |||| || |||| Sbjct: 464 ataaaactgagaaaatggactcggaaataaatttggttggaagctccattgcagggttca 523 Query: 152 gacctaaccattcaaggagaagcagtgggaacgacagaacctatgattccataggatttt 211 |||||||||||| | |||||||| ||||||||||||||||| |||| | ||||||||| | Sbjct: 524 gacctaaccattaatggagaagctgtgggaacgacagaacccatgactgcataggattct 583 Query: 212 attgaaaa-gaatcctaacacttcattgggtgggatggcggaacaaacc 259 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 584 tttgaaaacgaatcctaacacttcattgggtgggatggcggaacaaacc 632 Score = 65.9 bits (33), Expect = 1e-07 Identities = 79/93 (84%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 303 gacaggaaagagtaaatattcgcccgcgaaattcttatt-gaattagaatactttaccgc 361 |||||||||||||||||||||||||||||||| ||||| | | | |||||||| || Sbjct: 690 gacaggaaagagtaaatattcgcccgcgaaatctttattatagtaacaatactttcccat 749 Query: 362 gattcaataagagtaaaaataaggatatttttt 394 |||||||||||| |||||| || || ||||||| Sbjct: 750 gattcaataagaataaaaagaaagagatttttt 782 Score = 44.1 bits (22), Expect = 0.43 Identities = 46/53 (86%), Gaps = 2/53 (3%) Strand = Plus / Plus Query: 431 agataaatatccacacacatctggatatattctagatcttcttttttgactat 483 |||||||||| |||||| ||| ||||||||||| |||||||| |||||||| Sbjct: 826 agataaatat--acacacgtctagatatattctatctcttctttcttgactat 876
>gb|AF276970.1| Spartina maritima ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 656 Score = 180 bits (91), Expect = 3e-42 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 206 gattttattgaaaagaatcctaacacttcattgggtgggatggcggaacaaaccnnnnnn 265 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 41 gattttattgaaaagaatcctaatacttcattggg-gggatggcggaacaaaccaaaaaa 99 Query: 266 nttgtcttatttggtaagtttataaattaacaaataagacaggaaagagtaaatattcgc 325 ||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100 attgctttatttggtaaggttataaattaacaaataagacaagaaagagtaaatattcgc 159 Query: 326 ccgcgaaattcttattgaattagaatacttta 357 ||||||||| |||||| |||||||||||||| Sbjct: 160 ccgcgaaatctttattggattagaatacttta 191 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 362 gattcaataagagtaaaaataaggatatt 390 ||||||||||| |||||||||||||||| Sbjct: 220 gattcaataaggttaaaaataaggatatt 248
>gb|AY855878.1| Musa textilis voucher NEU0001 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1033 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY855877.1| Musa troglodytarum voucher NEU0388 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY855876.1| Musa troglodytarum voucher NEU0385 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>gb|AY855875.1| Musa jackeyi voucher NEU0389 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 101 bits (51), Expect = 2e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 673 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 616 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | |||||||||||||||| | |||||||| |||||||||| Sbjct: 615 gttgggagctccattgcagagttcagacctaaccattaatggagaagctatgggaacgac 556 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 555 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 496 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 495 tggcggaacgaacc 482 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 437 aataaaacagtaaagagtcaatattcgcccgcgaaa 402
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 24915926 taaatatagaatatagataaataaacatacacatctagatatattctagatcttctttct 24915985 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 24915986 tgactatatatt 24915997 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 337 ttattgaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 24915853 ttattgaattagaa-actttaccacgatttaataagagtaaaa 24915894 Score = 52.0 bits (26), Expect = 0.002 Identities = 48/54 (88%), Gaps = 1/54 (1%) Strand = Plus / Minus Query: 83 gcccgggttaataaaactgagaaaattaactcggaaagaaattttttggaagct 136 ||||||||||||||||||| ||||| | | ||||||||| | |||||||||||| Sbjct: 10696488 gcccgggttaataaaactgtgaaaa-tgattcggaaagagaatttttggaagct 10696436
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 417 taaatatagaatttagataaatatccacacacatctggatatattctagatcttcttttt 476 |||||||||||| |||||||||| || |||||||| ||||||||||||||||||||| | Sbjct: 77209 taaatatagaatatagataaataaacatacacatctagatatattctagatcttctttct 77268 Query: 477 tgactatatatt 488 |||||||||||| Sbjct: 77269 tgactatatatt 77280 Score = 54.0 bits (27), Expect = 4e-04 Identities = 40/43 (93%), Gaps = 1/43 (2%) Strand = Plus / Plus Query: 337 ttattgaattagaatactttaccgcgattcaataagagtaaaa 379 |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 77136 ttattgaattagaa-actttaccacgatttaataagagtaaaa 77177
>gb|AY500680.1| Physocarpus opulifolius voucher JSh1015 rpl16 gene, intron; chloroplast Length = 932 Score = 93.7 bits (47), Expect = 5e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 134 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 193 ||||||||| | ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 404 gctccgttgtagaattcagacctaaccattaatcgagaagtggtgggaacgacagaacct 463 Query: 194 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 252 ||| | |||| |||| ||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 464 gtgaatgcataagattctattgaaaacgaatcctaatgattcattgggtaggatggcgga 523 Query: 253 acaaacc 259 || |||| Sbjct: 524 acgaacc 530 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 308 gaaagagtaaatattcgcccgcgaa 332 ||||||||||||||||||||||||| Sbjct: 591 gaaagagtaaatattcgcccgcgaa 615
>gb|AY727405.1| Trillium ovatum rpL16 gene, intron; chloroplast Length = 988 Score = 93.7 bits (47), Expect = 5e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 134 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 193 ||||| |||| | |||||| |||||||||| | || ||||| |||||||||||||||| Sbjct: 435 gctccattgcagaattcaggcctaaccattaatggcgaagctatgggaacgacagaaccc 494 Query: 194 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 252 ||||| |||||||| ||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 495 gtgattgtataggattctattgaaaacgaatcctaatgattcattgggtgggatggcgga 554 Query: 253 acaaacc 259 || |||| Sbjct: 555 acgaacc 561 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 308 gaaagagtaaatattcgcccgcgaa 332 |||||||| |||||||||||||||| Sbjct: 625 gaaagagtcaatattcgcccgcgaa 649
>gb|AY855889.1| Musa x paradisiaca voucher TM128 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 5e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855888.1| Musa x paradisiaca voucher ITC0677 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 5e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855886.1| Musa x paradisiaca voucher ITC0983 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 5e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855885.1| Musa x paradisiaca voucher TM139 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 93.7 bits (47), Expect = 5e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855884.1| Musa acuminata voucher TM71 (QSG) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 5e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855881.1| Musa banksii voucher ITC0254 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 5e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855880.1| Musa acuminata subsp. malaccensis voucher ITC0250 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 5e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|AY855879.1| Musa acuminata subsp. malaccensis voucher TM68 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 93.7 bits (47), Expect = 5e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Minus Query: 69 aataataaagagccgcccgggttaataaaa-ctgagaaaattaactcggaaagaaatttt 127 |||||||||||||| | |||||||||||| || || | ||| ||||| ||| |||||| Sbjct: 651 aataataaagagcctc--gggttaataaaaactaaggagattgactcgagaaggaatttt 594 Query: 128 -ttggaagctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgac 186 |||| |||||| |||| | ||||| |||||||||| | |||||||| |||||||||| Sbjct: 593 gttgggagctccattgcagagttcaggcctaaccattaacggagaagctatgggaacgac 534 Query: 187 agaacctatgattccataggattttattgaaaa-gaatcctaacacttcattgggtggga 245 |||||| ||| | ||||||||| || |||||| |||||| || | |||||||||||||| Sbjct: 533 ggaacctgtgactgcataggattctactgaaaacgaatccgaataattcattgggtggga 474 Query: 246 tggcggaacaaacc 259 ||||||||| |||| Sbjct: 473 tggcggaacgaacc 460 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 298 aataagacaggaaagagtaaatattcgcccgcgaaa 333 ||||| |||| ||||||||||||||||||||||||| Sbjct: 415 aataaaacagtaaagagtaaatattcgcccgcgaaa 380
>gb|DQ100233.1| Purshia tridentata voucher 20A ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 8e-15 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 134 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 193 ||||||||| | ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 391 gctccgttgtagaattcagacctaaccattaatcgagaagtggtgggaacgacagaacct 450 Query: 194 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 252 ||| | |||| |||| ||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 451 gtgaatgcataagattctattgaaaacgaatcctaatgattcattgggtaggatggcgga 510 Query: 253 a 253 | Sbjct: 511 a 511 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 308 gaaagagtaaatattcgcccgcgaa 332 ||||||||||||||||||||||||| Sbjct: 578 gaaagagtaaatattcgcccgcgaa 602
>gb|DQ100231.1| Purshia tridentata voucher 1-1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 8e-15 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 134 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 193 ||||||||| | ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 391 gctccgttgtagaattcagacctaaccattaatcgagaagtggtgggaacgacagaacct 450 Query: 194 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 252 ||| | |||| |||| ||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 451 gtgaatgcataagattctattgaaaacgaatcctaatgattcattgggtaggatggcgga 510 Query: 253 a 253 | Sbjct: 511 a 511 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 308 gaaagagtaaatattcgcccgcgaa 332 ||||||||||||||||||||||||| Sbjct: 578 gaaagagtaaatattcgcccgcgaa 602
>gb|DQ100229.1| Purshia tridentata voucher B23 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 8e-15 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Plus Query: 134 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 193 ||||||||| | ||||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 391 gctccgttgtagaattcagacctaaccattaatcgagaagtggtgggaacgacagaacct 450 Query: 194 atgattccataggattttattgaaaa-gaatcctaacacttcattgggtgggatggcgga 252 ||| | |||| |||| ||||||||| ||||||||| |||||||||| |||||||||| Sbjct: 451 gtgaatgcataagattctattgaaaacgaatcctaatgattcattgggtaggatggcgga 510 Query: 253 a 253 | Sbjct: 511 a 511 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 308 gaaagagtaaatattcgcccgcgaa 332 ||||||||||||||||||||||||| Sbjct: 578 gaaagagtaaatattcgcccgcgaa 602
>gb|AY151625.1| Stylapterus ericoides subsp. pallidus rpl16 gene, intron; chloroplast gene for chloroplast product Length = 956 Score = 89.7 bits (45), Expect = 8e-15 Identities = 108/128 (84%), Gaps = 2/128 (1%) Strand = Plus / Plus Query: 134 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 193 ||||||||| | ||||| ||||||||||| | ||||| | |||||||||| |||||| Sbjct: 379 gctccgttgtagaattcaaacctaaccattaattgagaaacgatgggaacgacggaacct 438 Query: 194 atgattccataggattttattgaaaa--gaatcctaacacttcattgggtgggatggcgg 251 ||| | |||||||||| |||||||| ||||||||| | |||||||||||||||||||| Sbjct: 439 gtgaatacataggatttcattgaaaaacgaatcctaataattcattgggtgggatggcgg 498 Query: 252 aacaaacc 259 ||| |||| Sbjct: 499 aacgaacc 506 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 308 gaaagagtaaatattcgcccgcgaa 332 ||||||| ||||||||||||||||| Sbjct: 567 gaaagaggaaatattcgcccgcgaa 591
>gb|AY151624.1| Stylapterus ericifolius rpl16 gene, intron; chloroplast gene for chloroplast product Length = 956 Score = 89.7 bits (45), Expect = 8e-15 Identities = 108/128 (84%), Gaps = 2/128 (1%) Strand = Plus / Plus Query: 134 gctccgttgcgggattcagacctaaccattcaaggagaagcagtgggaacgacagaacct 193 ||||||||| | ||||| ||||||||||| | ||||| | |||||||||| |||||| Sbjct: 379 gctccgttgtagaattcaaacctaaccattaattgagaaacgatgggaacgacggaacct 438 Query: 194 atgattccataggattttattgaaaa--gaatcctaacacttcattgggtgggatggcgg 251 ||| | |||||||||| |||||||| ||||||||| | |||||||||||||||||||| Sbjct: 439 gtgaatacataggatttcattgaaaaatgaatcctaataattcattgggtgggatggcgg 498 Query: 252 aacaaacc 259 ||| |||| Sbjct: 499 aacgaacc 506 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 308 gaaagagtaaatattcgcccgcgaa 332 ||||||| ||||||||||||||||| Sbjct: 567 gaaagaggaaatattcgcccgcgaa 591 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,496,379 Number of Sequences: 3902068 Number of extensions: 7496379 Number of successful extensions: 176310 Number of sequences better than 10.0: 2835 Number of HSP's better than 10.0 without gapping: 2704 Number of HSP's successfully gapped in prelim test: 135 Number of HSP's that attempted gapping in prelim test: 167965 Number of HSP's gapped (non-prelim): 7224 length of query: 495 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 473 effective length of database: 17,147,199,772 effective search space: 8110625492156 effective search space used: 8110625492156 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
