>gb|AY109236.1| Zea mays PCO143837 mRNA sequence
          Length = 665

 Score =  115 bits (58), Expect = 1e-22
 Identities = 115/134 (85%)
 Strand = Plus / Plus

                                                                       
Query: 34  aaatcctcgaaaacataaatgcgttgtatgtggtgtacattgagggagtggtgggaaggt 93
           ||||||| |||||||| |||| | | |||||||||||||||||| | ||||| |||||||
Sbjct: 251 aaatcctggaaaacatgaatgggctctatgtggtgtacattgagcgtgtggtcggaaggt 310

                                                                       
Query: 94  tggcgagggaggtggcttctcctgctcaccaggggaagctggacctggatgtcttttcca 153
           |||| ||||| |||||| || |||| || ||||||||||||||||| || || || ||||
Sbjct: 311 tggcaagggatgtggctcctgctgcacatcaggggaagctggacctagaagttttctcca 370

                         
Query: 154 aacttctgtgctga 167
           |||| |||||||||
Sbjct: 371 aactgctgtgctga 384

>ref|XM_483731.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 957

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                       
Query: 58  tgtatgtggtgtacattgagggagtggtgggaaggttggcgagggaggtggcttctcctg 117
           |||||||||| ||||||||| ||||| | ||||| ||||| |||||||| ||| || |||
Sbjct: 848 tgtatgtggtatacattgagcgagtgattggaagattggcaagggaggtagctcctgctg 907

                                                   
Query: 118 ctcaccaggggaagctggacctggatgtcttttccaaact 157
           |||| ||||||||||||||||| || ||| | ||||||||
Sbjct: 908 ctcatcaggggaagctggacctagaagtcctctccaaact 947

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                            
Query: 58       tgtatgtggtgtacattgagggagtggtgggaaggttggcgagggaggtggcttctcctg 117
                |||||||||| ||||||||| ||||| | ||||| ||||| |||||||| ||| || |||
Sbjct: 27807006 tgtatgtggtatacattgagcgagtgattggaagattggcaagggaggtagctcctgctg 27807065

                                                        
Query: 118      ctcaccaggggaagctggacctggatgtcttttccaaact 157
                |||| ||||||||||||||||| || ||| | ||||||||
Sbjct: 27807066 ctcatcaggggaagctggacctagaagtcctctccaaact 27807105

>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0439B07
          Length = 89475

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                         
Query: 58    tgtatgtggtgtacattgagggagtggtgggaaggttggcgagggaggtggcttctcctg 117
             |||||||||| ||||||||| ||||| | ||||| ||||| |||||||| ||| || |||
Sbjct: 61463 tgtatgtggtatacattgagcgagtgattggaagattggcaagggaggtagctcctgctg 61522

                                                     
Query: 118   ctcaccaggggaagctggacctggatgtcttttccaaact 157
             |||| ||||||||||||||||| || ||| | ||||||||
Sbjct: 61523 ctcatcaggggaagctggacctagaagtcctctccaaact 61562

>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1150_A11
          Length = 142010

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                         
Query: 58    tgtatgtggtgtacattgagggagtggtgggaaggttggcgagggaggtggcttctcctg 117
             |||||||||| ||||||||| ||||| | ||||| ||||| |||||||| ||| || |||
Sbjct: 15084 tgtatgtggtatacattgagcgagtgattggaagattggcaagggaggtagctcctgctg 15143

                                                     
Query: 118   ctcaccaggggaagctggacctggatgtcttttccaaact 157
             |||| ||||||||||||||||| || ||| | ||||||||
Sbjct: 15144 ctcatcaggggaagctggacctagaagtcctctccaaact 15183

>gb|AC144631.3| Mus musculus BAC clone RP23-112C14 from 3, complete sequence
          Length = 179548

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 141    gatgtcttttccaaacttctg 161
              |||||||||||||||||||||
Sbjct: 118816 gatgtcttttccaaacttctg 118836

>dbj|AP003113.1| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1747F8
          Length = 161402

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 259   aaatctattgttttgctgttattct 283
             |||| ||||||||||||||||||||
Sbjct: 61383 aaatgtattgttttgctgttattct 61407

>ref|NM_113165.3| Arabidopsis thaliana unknown protein AT3G22660 mRNA, complete cds
          Length = 1135

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 322 tcatcaatcatgttcatcacatca 345
           |||||||||||||||||| |||||
Sbjct: 120 tcatcaatcatgttcatctcatca 97

>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence
          Length = 206380

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   tcactcacatattcatcaat 329
             ||||||||||||||||||||
Sbjct: 92182 tcactcacatattcatcaat 92163

>gb|AC102525.8| Mus musculus chromosome 8, clone RP24-133K20, complete sequence
          Length = 162463

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    tcactcacatattcatcaat 329
              ||||||||||||||||||||
Sbjct: 136155 tcactcacatattcatcaat 136136

>gb|AC167244.2| Mus musculus BAC clone RP24-84C23 from chromosome 9, complete sequence
          Length = 235852

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    tctattgttttgctgttatt 281
              ||||||||||||||||||||
Sbjct: 103399 tctattgttttgctgttatt 103380

>emb|BX088548.10| Zebrafish DNA sequence from clone CH211-188E4, complete sequence
          Length = 152713

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    gcttctcctgctcaccaggg 127
              ||||||||||||||||||||
Sbjct: 145522 gcttctcctgctcaccaggg 145541

>emb|CR853286.10| Zebrafish DNA sequence from clone DKEY-218F9 in linkage group 19,
             complete sequence
          Length = 163733

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   gcttctcctgctcaccaggg 127
             ||||||||||||||||||||
Sbjct: 80266 gcttctcctgctcaccaggg 80285

>gb|AC129016.4| Mus musculus BAC clone RP24-389J11 from chromosome 10, complete sequence
          Length = 160180

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gagggagtggtgggaaggtt 94
              ||||||||||||||||||||
Sbjct: 125512 gagggagtggtgggaaggtt 125531

>gb|BT001010.1| Arabidopsis thaliana At3g22660/MWI23_3 mRNA, complete cds
          Length = 882

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 322 tcatcaatcatgttcatcacatca 345
           |||||||||||||||||| |||||
Sbjct: 53  tcatcaatcatgttcatctcatca 30

>gb|AC073125.5| Homo sapiens BAC clone RP11-636L15 from 7, complete sequence
          Length = 188804

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 81     gtggtgggaaggttggcgagggag 104
              |||||||||||||||| |||||||
Sbjct: 111450 gtggtgggaaggttggggagggag 111427

>emb|BX293991.12| Zebrafish DNA sequence from clone CH211-261I24 in linkage group 11,
             complete sequence
          Length = 198825

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   gcttctcctgctcaccaggg 127
             ||||||||||||||||||||
Sbjct: 47206 gcttctcctgctcaccaggg 47187

>emb|BX927088.11| Zebrafish DNA sequence from clone CH211-212M21 in linkage group 2,
              complete sequence
          Length = 201361

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    gcttctcctgctcaccaggg 127
              ||||||||||||||||||||
Sbjct: 134012 gcttctcctgctcaccaggg 133993

>gb|AC117489.3| Homo sapiens 3 BAC CTD-2006M22 (CalTech BAC Library D) complete
             sequence
          Length = 145729

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   tctattgttttgctgttatt 281
             ||||||||||||||||||||
Sbjct: 48224 tctattgttttgctgttatt 48205

>gb|AC037441.12| Homo sapiens chromosome , clone RP11-87E22, complete sequence
          Length = 163147

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 81    gtggtgggaaggttggcgagggaggtgg 108
             ||||||||||||| |||| |||||||||
Sbjct: 10991 gtggtgggaaggtgggcgggggaggtgg 11018

>dbj|AK132708.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4922501A19 product:hypothetical protein,
            full insert sequence
          Length = 4642

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  accaggggaagctggacctg 140
            ||||||||||||||||||||
Sbjct: 2816 accaggggaagctggacctg 2835

>gb|AC079950.23| Homo sapiens 12q BAC RP11-575A21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 135123

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    cacatattgttccattgtct 308
              ||||||||||||||||||||
Sbjct: 109517 cacatattgttccattgtct 109536

>gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, complete sequence
          Length = 194297

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tattgttccattgtctttca 312
             ||||||||||||||||||||
Sbjct: 94861 tattgttccattgtctttca 94842

>gb|AC021427.10| Homo sapiens chromosome 11, clone RP11-399N15, complete sequence
          Length = 174147

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    tattgttccattgtctttca 312
              ||||||||||||||||||||
Sbjct: 156913 tattgttccattgtctttca 156894

>gb|AY058884.1| Arabidopsis thaliana AT3g22660/MWI23_3 mRNA, complete cds
          Length = 1116

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 322 tcatcaatcatgttcatcacatca 345
           |||||||||||||||||| |||||
Sbjct: 120 tcatcaatcatgttcatctcatca 97

>dbj|AK040492.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length
          enriched library, clone:A430103D08 product:weakly
          similar to EPSILON TUBULIN [Paramecium tetraurelia],
          full insert sequence
          Length = 3526

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 75 gagggagtggtgggaaggtt 94
          ||||||||||||||||||||
Sbjct: 30 gagggagtggtgggaaggtt 11

>ref|NM_001034902.1| Mus musculus similar to empty spiracles homolog 1 (LOC545861), mRNA
          Length = 4642

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  accaggggaagctggacctg 140
            ||||||||||||||||||||
Sbjct: 2816 accaggggaagctggacctg 2835

>gb|AC009428.4|AC009428 Homo sapiens chromosome , clone RP11-45M12, complete sequence
          Length = 167172

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ggatgtcttttccaaacttc 159
             ||||||||||||||||||||
Sbjct: 57822 ggatgtcttttccaaacttc 57803

>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 285     gaagcacatattgttccatt 304
               ||||||||||||||||||||
Sbjct: 1104644 gaagcacatattgttccatt 1104625

>dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23
          Length = 77273

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 322  tcatcaatcatgttcatcacatca 345
            |||||||||||||||||| |||||
Sbjct: 6280 tcatcaatcatgttcatctcatca 6303

>dbj|AK129558.1| Homo sapiens cDNA FLJ26047 fis, clone PRS02335
          Length = 1784

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 262  tctattgttttgctgttatt 281
            ||||||||||||||||||||
Sbjct: 1360 tctattgttttgctgttatt 1379

>emb|CR354561.11| Zebrafish DNA sequence from clone DKEY-203K18 in linkage group 25,
             complete sequence
          Length = 163175

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   gcttctcctgctcaccaggg 127
             ||||||||||||||||||||
Sbjct: 83122 gcttctcctgctcaccaggg 83141

>gb|AC153373.4| Mus musculus 6 BAC RP23-100J14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 218409

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   accaggggaagctggacctg 140
             ||||||||||||||||||||
Sbjct: 57760 accaggggaagctggacctg 57779

>gb|AC131775.4| Mus musculus BAC clone RP24-313O6 from 6, complete sequence
          Length = 171720

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   tgctaataaatctattgttt 271
             ||||||||||||||||||||
Sbjct: 63477 tgctaataaatctattgttt 63458

>gb|AC153958.2| Mus musculus 10 BAC RP24-541B4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 176618

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 75     gagggagtggtgggaaggtt 94
              ||||||||||||||||||||
Sbjct: 133102 gagggagtggtgggaaggtt 133083

>gb|AC055854.14| Homo sapiens chromosome 8, clone RP11-459E5, complete sequence
          Length = 138388

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 81    gtggtgggaaggttggcgagggaggtgg 108
             ||||||||||||| |||| |||||||||
Sbjct: 86138 gtggtgggaaggtgggcgggggaggtgg 86165


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,521,557
Number of Sequences: 3902068
Number of extensions: 3521557
Number of successful extensions: 72445
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72363
Number of HSP's gapped (non-prelim): 82
length of query: 348
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 326
effective length of database: 17,147,199,772
effective search space: 5589987125672
effective search space used: 5589987125672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)