ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2g15 |
|---|---|
| Clone Library Name | barley_pub |
>KR412_HUMAN (Q9BQ66) Keratin-associated protein 4-12 (Keratin-associated| protein 4.12) (Ultrahigh sulfur keratin-associated protein 4.12) Length = 201 Score = 32.3 bits (72), Expect = 0.92 Identities = 16/50 (32%), Positives = 19/50 (38%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVCP 5 SCC T +CC S C S C Q C C + C + CP Sbjct: 104 SCCQTTCCRTTCCRPSCCVSSCCRPQCCQSVCCQPTCCRPSCCISSSCCP 153 Score = 31.2 bits (69), Expect = 2.0 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVCPR 2 SCCI+ SCC S C C+ SC+ C + C + + CPR Sbjct: 144 SCCISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT-CVI-STCPR 192
>FBX15_MACFA (Q9GKV7) F-box only protein 15| Length = 434 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = -1 Query: 549 LQLLDLYDCSRITVLAMRWFKKPLFPRLRWLGL--RXSLNRIMVDALVKTRPFLRLAC 382 L L D +T + M W+K P RLRW L + +L+ + V ++ +R+ C Sbjct: 160 LASLSTLDLCGVTPVFMDWYKTPTKHRLRWHSLIAKYNLSHLTVSTMIGCDRLIRIFC 217
>KRA43_HUMAN (Q9BYR4) Keratin-associated protein 4-3 (Keratin-associated protein| 4.3) (Ultrahigh sulfur keratin-associated protein 4.3) (Fragment) Length = 98 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/49 (34%), Positives = 18/49 (36%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 +CC I SCC S C S C T C C I CY C Sbjct: 1 TCCRPSCCISSCCRPSCCISSCCKPSCCQTTCCRPSCC-ISSCYRPQCC 48 Score = 29.3 bits (64), Expect = 7.8 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 SCCI+ SCC + C S C+ + C C + C + + C Sbjct: 16 SCCISSCCKPSCCQTTCCRPSCCISSCYRPQCCQPSCCR-PACCISSCC 63
>MT1_MOUSE (P02802) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 61 Score = 31.2 bits (69), Expect = 2.0 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = -3 Query: 148 CITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 C TG SC SSCAC C + + C C V C G VC Sbjct: 7 CSTG---GSCTCTSSCACKNCKCTSCKKSCCSCCPVGCSKCAQGCVC 50
>GSH1_NEUCR (Q8X0X0) Glutamate--cysteine ligase (EC 6.3.2.2)| (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) Length = 728 Score = 31.2 bits (69), Expect = 2.0 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = -2 Query: 347 HPVTGVATRTTIPKILSPGSWTVSQYPTPKPSARS 243 HP+T TT P+I SPG +T YP P RS Sbjct: 155 HPIT----LTTFPRIGSPGVFTEPSYPVSGPKLRS 185
>THET_THEVU (P04072) Thermitase (EC 3.4.21.66)| Length = 279 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = -2 Query: 329 ATRTTIPKILSPGSWTVSQYPTPKPSARSNAA-AWPYAAVSHVCLPQKGRNSSH 171 +T ++ + +PGSW S YPT ++ S + A P+ A L +GR++S+ Sbjct: 194 STYGSVVDVAAPGSWIYSTYPTSTYASLSGTSMATPHVAGVAGLLASQGRSASN 247
>KRB2D_SHEEP (P08131) Keratin, high-sulfur matrix protein, B2D| Length = 181 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/49 (30%), Positives = 20/49 (40%) Frame = -3 Query: 163 VLVSCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLG 17 + SCC SCC +S S C + + C C+Q GC G Sbjct: 39 IQTSCCQPTSIQTSCCQPTSIQTSCCQPISIQTSCCQPTCLQTSGCETG 87
>MT2_CRILO (P68041) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 30.0 bits (66), Expect = 4.5 Identities = 17/49 (34%), Positives = 18/49 (36%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 SC G SC SC C C T + C C V C G VC Sbjct: 6 SCATDG----SCSCAGSCKCKECKCTTCKKSCCSCCPVGCAKCSQGCVC 50
>MT2_CRIGR (P67981) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 30.0 bits (66), Expect = 4.5 Identities = 17/49 (34%), Positives = 18/49 (36%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 SC G SC SC C C T + C C V C G VC Sbjct: 6 SCATDG----SCSCAGSCKCKECKCTTCKKSCCSCCPVGCAKCSQGCVC 50
>MT1G_HUMAN (P13640) Metallothionein-1G (MT-1G) (Metallothionein-IG) (MT-IG)| (Metallothionein-1K) (MT-1K) Length = 62 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 SC G SC SSC C C + + C C V C G +C Sbjct: 6 SCAAAG---VSCTCASSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCIC 51
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 30.0 bits (66), Expect = 4.5 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +2 Query: 344 DVSRYGVPSSSPPHARRKKGRVLTRASTMILFKLXLSPSHRSLGNNGFLNHRIASTVILL 523 D +YG S P RR+ G+ T I +L L P R G G L+ +A+ + Sbjct: 2 DFEQYGQSSQQPRQRRRRAGKRRLNNKTPIAARLALDPQLR--GKVGILSEDLANDLFQQ 59 Query: 524 QS 529 Q+ Sbjct: 60 QA 61
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 30.0 bits (66), Expect = 4.5 Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 3/108 (2%) Frame = +2 Query: 89 HGTGT*GNVTARKYSLSGNTTRDQHKIDESCFDPSGASKHGS-QQHRAKLPHYSSLMVSA 265 HG+G+ + + Y T + + SG SKHGS H + + S A Sbjct: 325 HGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSGQA 384 Query: 266 SDTG--SPSNCQGXXXXXXXXXWRHQSPDVSRYGVPSSSPPHARRKKG 403 S +G S+ Q RH S SP H +R G Sbjct: 385 SSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSG 432
>KRB2A_SHEEP (P02438) Keratin, high-sulfur matrix protein, B2A| Length = 171 Score = 30.0 bits (66), Expect = 4.5 Identities = 15/46 (32%), Positives = 18/46 (39%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLG 17 SCC SCC S S C + + C C+Q GC G Sbjct: 32 SCCQPTSIQTSCCQPISIQTSCCQPTSIQTSCCQPTCLQTSGCETG 77
>MT2_MESAU (P17808) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 61 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/49 (34%), Positives = 18/49 (36%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 SC G SC SC C C T + C C V C G VC Sbjct: 6 SCATDG----SCSCSGSCKCKECKCTTCKKSCCSCCPVGCAKCSQGCVC 50
>MT2H_BOVIN (P55943) Metallothionein-II, hippocampal (MT-2)| Length = 61 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/47 (31%), Positives = 19/47 (40%) Frame = -3 Query: 148 CITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 C TG SC +SC C C + + C C V C G +C Sbjct: 7 CATG---GSCTCANSCTCKACKCASCKKSCCSCCPVGCAKCAQGCIC 50
>MT1M_HUMAN (Q8N339) Metallothionein-1M (MT-1M) (Metallothionein-IM) (MT-IM)| Length = 61 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/47 (34%), Positives = 18/47 (38%) Frame = -3 Query: 148 CITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 C TG SC SC C C + + C C V C G VC Sbjct: 7 CTTG---VSCACTGSCTCKECKCTSCKKSCCSCCPVGCAKCAHGCVC 50
>KRB2C_SHEEP (P02440) Keratin, high-sulfur matrix protein, B2C| Length = 151 Score = 29.6 bits (65), Expect = 5.9 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = -3 Query: 148 CITG*AIFSCCYISSCACSVCMWQTFVVTSC-YVCCVQIXGCYLG 17 C T S C S+C+ + C T + TSC C+Q GC G Sbjct: 13 CSTAGTCGSSCCRSTCSQTSCCQPTSIQTSCCQPTCLQTSGCETG 57
>VGLM_HHV6U (Q04630) Glycoprotein M| Length = 344 Score = 29.6 bits (65), Expect = 5.9 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -1 Query: 177 LSSILCWSLVVLPDKLYFLAVTFPHVPVPCA 85 L SI+C +L + +Y +A+ FP++ PCA Sbjct: 15 LVSIICAALSFINVTVYLIAINFPNLGFPCA 45
>CATA_BRUSU (Q8FWU0) Catalase (EC 1.11.1.6)| Length = 498 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -2 Query: 383 VAARSWGLHTGTHPVTGVATRTTIPKILSPGSWT 282 V A+ WG + GT +TG +R T K+L PG+ T Sbjct: 53 VHAKGWGAY-GTLTITGDISRYTKAKVLQPGAQT 85
>CATA_BRUME (P0A326) Catalase (EC 1.11.1.6)| Length = 498 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -2 Query: 383 VAARSWGLHTGTHPVTGVATRTTIPKILSPGSWT 282 V A+ WG + GT +TG +R T K+L PG+ T Sbjct: 53 VHAKGWGAY-GTLTITGDISRYTKAKVLQPGAQT 85
>CATA_BRUAB (P0A327) Catalase (EC 1.11.1.6)| Length = 498 Score = 29.6 bits (65), Expect = 5.9 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -2 Query: 383 VAARSWGLHTGTHPVTGVATRTTIPKILSPGSWT 282 V A+ WG + GT +TG +R T K+L PG+ T Sbjct: 53 VHAKGWGAY-GTLTITGDISRYTKAKVLQPGAQT 85
>KRA15_HUMAN (Q9BYS1) Keratin-associated protein 1-5 (Keratin-associated protein| 1.5) (High sulfur keratin-associated protein 1.5) Length = 174 Score = 29.6 bits (65), Expect = 5.9 Identities = 18/60 (30%), Positives = 22/60 (36%) Frame = -3 Query: 196 PRRVETALINLVLVSCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLG 17 PR +T+ S +G SCC S C S C + C C QI C G Sbjct: 37 PRSCQTSFCGFPSFST--SGTCSSSCCQPSCCETSCCQPSCCETSCCQPSCCQISSCGTG 94
>MT2_COLLI (P15787) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| Length = 63 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/39 (33%), Positives = 15/39 (38%) Frame = -3 Query: 124 SCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 SC SC C C Q+ + C C C G VC Sbjct: 13 SCSCAGSCKCKNCRCQSCRKSCCSCCPASCSNCAKGCVC 51
>MT1_RAT (P02803) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 61 Score = 29.3 bits (64), Expect = 7.8 Identities = 17/47 (36%), Positives = 19/47 (40%) Frame = -3 Query: 148 CITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 C TG SC SSC C C + + C C V C G VC Sbjct: 7 CSTG---GSCTCSSSCGCKNCKCTSCKKSCCSCCPVGCSKCAQGCVC 50
>MT1_CERAE (P02797) Metallothionein-1 (MT-1) (Metallothionein-I) (MT-I)| Length = 61 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/47 (34%), Positives = 18/47 (38%) Frame = -3 Query: 148 CITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 C TG SC SC C C + + C C V C G VC Sbjct: 7 CATG---VSCTCADSCKCKECKCTSCKKSCCSCCPVGCAKCAQGCVC 50
>MT1C_SHEEP (P09578) Metallothionein-1C (MT-1C) (Metallothionein-IC) (MT-IC)| Length = 61 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/47 (31%), Positives = 18/47 (38%) Frame = -3 Query: 148 CITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 C TG SC SC C C + + C C V C G +C Sbjct: 7 CSTG---SSCSCAGSCTCKACRCPSCKKSCCSCCPVGCAKCAQGCIC 50
>MT1B_SHEEP (P09577) Metallothionein-1B (MT-1B) (Metallothionein-IB) (MT-IB)| Length = 61 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 SC +G SC SC C C + + C C V C G VC Sbjct: 6 SCPTSG----SCSCAGSCTCKACRCPSCKKSCCSCCPVGCAKCAQGCVC 50
>UBP25_MOUSE (P57080) Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15)| (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (mUSP25) Length = 1055 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 258 FRRRILAHRPTARAQDLRNRRPRGDTSHRMCPGM 359 FRR +L ++P + AQDL PR HR P M Sbjct: 193 FRRLVLNYKPPSNAQDL----PRNQKEHRNLPFM 222
>KRA48_HUMAN (Q9BYQ9) Keratin-associated protein 4-8 (Keratin-associated protein| 4.8) (Ultrahigh sulfur keratin-associated protein 4.8) (Fragment) Length = 114 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = -3 Query: 154 SCCITG*AIFSCCYISSCACSVCMWQTFVVTSCYVCCVQIXGCYLGNVC 8 SCCI+ SCC S C C T C+ C I C + C Sbjct: 22 SCCISSCCRPSCCVSSCCKPQCCQSVCCQPTCCHPSC-SISSCCRPSCC 69
>UBP25_HUMAN (Q9UHP3) Ubiquitin carboxyl-terminal hydrolase 25 (EC 3.1.2.15)| (Ubiquitin thioesterase 25) (Ubiquitin-specific-processing protease 25) (Deubiquitinating enzyme 25) (USP on chromosome 21) Length = 1087 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +3 Query: 258 FRRRILAHRPTARAQDLRNRRPRGDTSHRMCPGM 359 FRR +L ++P + AQDL PR HR P M Sbjct: 193 FRRLVLNYKPPSNAQDL----PRNQKEHRNLPFM 222
>YX1_CVHSA (P59632) Hypothetical protein X1 (ORF3) (Orf3a)| Length = 274 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -2 Query: 176 SHQSCVGLLLYYRISYIFLLLHFLMCLFRVHVANICCYIMLCMLC 42 SH V + + Y++ L++FL C+ N C IM C LC Sbjct: 92 SHLLLVAAGMEAQFLYLYALIYFLQCI------NACRIIMRCWLC 130 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,463,039 Number of Sequences: 219361 Number of extensions: 1962045 Number of successful extensions: 6378 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5709 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6261 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
