ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2g13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloro... 136 1e-32
2ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precur... 135 3e-32
3ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast prec... 128 3e-30
4ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast prec... 125 2e-29
5ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precur... 124 4e-29
6ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precur... 122 2e-28
7ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP) 99 2e-21
8ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precur... 94 8e-20
9ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precur... 93 2e-19
10ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor 93 2e-19
11ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor 89 4e-18
12RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, ch... 72 3e-13
13RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA 71 8e-13
14RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Co... 70 2e-12
15RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (He... 70 2e-12
16RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-bindin... 67 8e-12
17CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit... 66 2e-11
18CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit... 66 2e-11
19CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit... 64 7e-11
20CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit... 64 7e-11
21CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit... 64 7e-11
22CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit... 64 7e-11
23GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochon... 63 2e-10
24RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding ... 62 4e-10
25CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine... 62 5e-10
26CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine... 62 5e-10
27CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-r... 61 6e-10
28CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine... 61 6e-10
29CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine... 61 6e-10
30RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding ... 61 6e-10
31GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10 60 1e-09
32GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A 60 1e-09
33GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A 60 2e-09
34GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2 59 2e-09
35GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7 59 2e-09
36GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-indu... 59 3e-09
37GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein 59 4e-09
38CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine... 58 5e-09
39GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro... 57 9e-09
40RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2 57 1e-08
41ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visu... 56 2e-08
42ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visu... 56 2e-08
43CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcrip... 56 3e-08
44PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-b... 56 3e-08
45RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HS... 55 3e-08
46PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-bi... 55 3e-08
47NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA... 55 3e-08
48RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif p... 55 3e-08
49RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ss... 55 4e-08
50RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2 55 4e-08
51GAR2_SCHPO (P41891) Protein gar2 55 4e-08
52ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC) 55 6e-08
53ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (P... 55 6e-08
54NSR1_YEAST (P27476) Nuclear localization sequence-binding protei... 54 7e-08
55ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encepha... 54 7e-08
56ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encepha... 54 7e-08
57ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalo... 54 7e-08
58RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif pro... 54 1e-07
59ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB) 54 1e-07
60ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2 54 1e-07
61ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 54 1e-07
62ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (E... 54 1e-07
63GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein ... 53 2e-07
64MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing prote... 53 2e-07
65HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (... 52 3e-07
66ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR) 52 3e-07
67HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (... 52 4e-07
68RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif p... 52 4e-07
69ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (E... 52 5e-07
70YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 i... 51 6e-07
71ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1 (... 51 6e-07
72ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1 (... 51 6e-07
73ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1 (He... 51 6e-07
74ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1 (... 51 6e-07
75RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15 51 6e-07
76SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-a... 51 8e-07
77TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha) 51 8e-07
78EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Emb... 51 8e-07
79RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif p... 51 8e-07
80PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g... 51 8e-07
81TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha) 51 8e-07
82DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autoso... 51 8e-07
83CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1 50 1e-06
84HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hn... 50 1e-06
85TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1) 50 1e-06
86TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding p... 50 1e-06
87RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-bindin... 50 2e-06
88ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1 (... 50 2e-06
89RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif p... 50 2e-06
90FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing ... 50 2e-06
91EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (... 49 2e-06
92EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (... 49 2e-06
93PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-bi... 49 2e-06
94MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing prote... 49 3e-06
95RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-bindin... 49 3e-06
96HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34) 49 3e-06
97GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment) 49 3e-06
98ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/... 49 3e-06
99ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/... 49 3e-06
100ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hn... 49 4e-06
101ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (... 49 4e-06
102DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autoso... 49 4e-06
103DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autoso... 49 4e-06
104ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (... 49 4e-06
105RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 h... 49 4e-06
106MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2) 49 4e-06
107MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156) 49 4e-06
108DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autoso... 49 4e-06
109RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 h... 49 4e-06
110HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (... 48 5e-06
111BOLL_MACFA (Q8WP23) Protein boule-like 48 5e-06
112BOLL_HUMAN (Q8N9W6) Protein boule-like 48 5e-06
113TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein 48 5e-06
114PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-bindi... 48 5e-06
115NAM8_YEAST (Q00539) Protein NAM8 48 5e-06
116PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 48 7e-06
117PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 48 7e-06
118RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 h... 48 7e-06
119ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 ... 48 7e-06
120MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing prote... 48 7e-06
121YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 i... 47 9e-06
122PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-bi... 47 9e-06
123THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1... 47 9e-06
124HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (... 47 9e-06
125TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10 (Tran... 47 9e-06
126TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10 (Tr... 47 9e-06
127TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10 (Tr... 47 9e-06
128HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hn... 47 9e-06
129THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and expor... 47 9e-06
130HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hn... 47 1e-05
131PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-bi... 47 1e-05
132PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-bi... 47 1e-05
133PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-bi... 47 1e-05
134PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-bi... 47 1e-05
135PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-bi... 47 1e-05
136YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5 47 1e-05
137TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein) 47 1e-05
138TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein) 47 1e-05
139MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing prote... 47 1e-05
140HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (... 47 1e-05
141HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (... 47 1e-05
142SXL_DROSU (Q24668) Protein sex-lethal 47 1e-05
143SXL_DROME (P19339) Protein sex-lethal 47 1e-05
144ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (... 47 1e-05
145SXL_MEGSC (O01671) Sex-lethal homolog 47 1e-05
146RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 h... 47 1e-05
147RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial pre... 47 2e-05
148MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing prote... 47 2e-05
149MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phos... 47 2e-05
150BOLL_MOUSE (Q924M5) Protein boule-like 47 2e-05
151RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interact... 47 2e-05
152RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif pro... 46 2e-05
153DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in azoosp... 46 2e-05
154RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interact... 46 2e-05
155DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in azoosp... 46 2e-05
156A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1 46 2e-05
157A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1 46 2e-05
158SAP49_SCHPO (O14102) Spliceosome-associated protein 49 46 2e-05
159RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-bindin... 46 2e-05
160PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-... 46 3e-05
161RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-ri... 46 3e-05
162SCE3_SCHPO (O14369) Probable RNA-binding protein sce3 46 3e-05
163RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, fa... 46 3e-05
164PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-bi... 46 3e-05
165MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phos... 46 3e-05
166DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in azoosp... 46 3e-05
167SXL_MUSDO (O17310) Sex-lethal homolog 45 3e-05
168PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-bin... 45 3e-05
169PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-bindi... 45 3e-05
170PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-bi... 45 4e-05
171PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-bind... 45 4e-05
172PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-bi... 45 4e-05
173PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-bi... 45 4e-05
174PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-bi... 45 4e-05
175ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1 45 4e-05
176YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 i... 45 6e-05
177DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3 45 6e-05
178MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musash... 45 6e-05
179MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musa... 45 6e-05
180MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musa... 45 6e-05
181MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing prote... 45 6e-05
182LARK_DROME (Q94901) RNA-binding protein lark 45 6e-05
183DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2 45 6e-05
184DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1 45 6e-05
185DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4 45 6e-05
186SGN1_YEAST (P40561) RNA-binding protein SGN1 44 8e-05
187SXL_CERCA (O61374) Sex-lethal homolog (CCSXL) 44 8e-05
188SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Sp... 44 8e-05
189SXL_CHRRU (O97018) Sex-lethal homolog 44 8e-05
190DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein) 44 8e-05
191RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interact... 44 8e-05
192HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (... 44 8e-05
193SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Spli... 44 8e-05
194SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Sp... 44 8e-05
195SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Sp... 44 8e-05
196SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Sp... 44 8e-05
197PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-... 44 1e-04
198MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musa... 44 1e-04
199MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing prote... 44 1e-04
200MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musa... 44 1e-04
201RSD1_SCHPO (O13845) RNA-binding protein rsd1 44 1e-04
202RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interact... 44 1e-04
203PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-bi... 44 1e-04
204PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic a... 44 1e-04
205REFP2_MOUSE (Q9JJW6) RNA and export factor-binding protein 2 44 1e-04
206PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 44 1e-04
207RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C... 44 1e-04
208MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing prote... 44 1e-04
209NOP12_CANGA (Q6FUS6) Nucleolar protein 12 44 1e-04
210YHH5_YEAST (P38760) Hypothetical 75.9 kDa protein in SPO13-ARG4 ... 44 1e-04
211RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa ho... 44 1e-04
212HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4... 44 1e-04
213PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppres... 43 2e-04
214ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimu... 43 2e-04
215YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 i... 43 2e-04
216RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif pro... 43 2e-04
217IF34_CAEEL (Q19706) Probable eukaryotic translation initiation f... 43 2e-04
218MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing prote... 43 2e-04
219ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimula... 43 2e-04
220PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (6... 43 2e-04
221SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nucl... 43 2e-04
222RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif pro... 43 2e-04
223FCA_ARATH (O04425) Flowering time control protein FCA 43 2e-04
224RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif pro... 42 3e-04
225MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phos... 42 3e-04
226RNP24_SCHPO (Q09100) RNA-binding protein rnp24 42 4e-04
227RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif pro... 42 4e-04
228ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, ... 42 5e-04
229ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimu... 42 5e-04
230NCBP2_ASHGO (Q754W7) Nuclear cap-binding protein subunit 2 42 5e-04
231HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (h... 42 5e-04
232HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 ... 42 5e-04
233HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 ... 42 5e-04
234MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing prote... 42 5e-04
235ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimu... 41 6e-04
236PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-bi... 41 6e-04
237PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-bi... 41 6e-04
238PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-bi... 41 6e-04
239SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein) 41 6e-04
240EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing... 41 6e-04
241RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif p... 41 6e-04
242RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif p... 41 6e-04
243RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif p... 41 6e-04
244RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif p... 41 6e-04
245ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (... 41 6e-04
246IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 s... 41 8e-04
247IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 s... 41 8e-04
248EWS_MOUSE (Q61545) RNA-binding protein EWS 41 8e-04
249SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized ... 40 0.001
250SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized ... 40 0.001
251ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B ... 40 0.001
252RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F... 40 0.001
253RB97D_DROME (Q02926) Ribonucleoprotein RB97D 40 0.001
254NOP12_KLULA (Q6CKV6) Nucleolar protein 12 40 0.001
255FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncog... 40 0.002
256FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein) 40 0.002
257NOP12_SCHPO (O13741) Nucleolar protein 12 40 0.002
258IF39_YEAST (P06103) Eukaryotic translation initiation factor 3 9... 40 0.002
259SART3_HUMAN (Q15020) Squamous cell carcinoma antigen recognized ... 40 0.002
260RAVR1_RAT (Q5XI28) Protein raver-1 40 0.002
261RAVR1_MOUSE (Q9CW46) Protein raver-1 40 0.002
262YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c i... 40 0.002
263RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri... 40 0.002
264ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B ... 40 0.002
265FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein) 40 0.002
266NOP4_YEAST (P37838) Nucleolar protein NOP4 (Nucleolar protein NO... 40 0.002
267RBM8A_MOUSE (Q9CWZ3) RNA-binding protein 8A (RNA-binding motif p... 39 0.002
268RBM8A_HUMAN (Q9Y5S9) RNA-binding protein 8A (RNA-binding motif p... 39 0.002
269DAZ1_CAEEL (Q20870) DAZ protein 1 39 0.002
270CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (C... 39 0.002
271CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (C... 39 0.002
272IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SN... 39 0.002
273MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phos... 39 0.002
274NUCL_XENLA (P20397) Nucleolin (Protein C23) 39 0.003
275IF34_SCHPO (P78795) Probable eukaryotic translation initiation f... 39 0.003
276NOP12_YEAST (Q08208) Nucleolar protein 12 39 0.003
277YNR5_YEAST (P53883) Hypothetical 45.7 kDa protein in RPS3-PSD1 i... 39 0.004
278RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U... 39 0.004
279NCBP2_MOUSE (Q9CQ49) Nuclear cap-binding protein subunit 2 (20 k... 39 0.004
280NCBP2_HUMAN (P52298) Nuclear cap-binding protein subunit 2 (20 k... 39 0.004
281NCBP2_BOVIN (Q3ZBJ1) Nuclear cap-binding protein subunit 2 39 0.004
282RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U... 38 0.005
283RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U... 38 0.005
284MK67I_MOUSE (Q91VE6) MKI67 FHA domain-interacting nucleolar phos... 38 0.005
285SFR12_RAT (Q9JKL7) Splicing factor, arginine/serine-rich 12 (Ser... 38 0.005
286SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (S... 38 0.005
287RNP4F_DROME (Q9W4D2) RNA-binding protein 4F 38 0.005
288SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12 (S... 38 0.005
289NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting... 38 0.005
290RAVR1_HUMAN (Q8IY67) Protein raver-1 38 0.005
291SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attach... 38 0.007
292HNRPC_RAT (P17132) Heterogeneous nuclear ribonucleoprotein C (hn... 38 0.007
293BOULE_DROME (Q24207) Protein boule 38 0.007
294NOP12_YARLI (Q6C2Q7) Nucleolar protein 12 38 0.007
295IF4H_MOUSE (Q9WUK2) Eukaryotic translation initiation factor 4H ... 38 0.007
296IF4H_HUMAN (Q15056) Eukaryotic translation initiation factor 4H ... 38 0.007
297SAFB1_HUMAN (Q15424) Scaffold attachment factor B (Scaffold atta... 37 0.009
298NUCL_RAT (P13383) Nucleolin (Protein C23) 37 0.012
299SAFB2_HUMAN (Q14151) Scaffold attachment factor B2 37 0.012
300NUCL_MESAU (P08199) Nucleolin (Protein C23) 37 0.012
301NUCL_MOUSE (P09405) Nucleolin (Protein C23) 37 0.012
302TADBP_MOUSE (Q921F2) TAR DNA-binding protein 43 (TDP-43) 37 0.016
303SAFB2_MOUSE (Q80YR5) Scaffold attachment factor B2 37 0.016
304NUCL_CHICK (P15771) Nucleolin (Protein C23) 37 0.016
305YAG3_SCHPO (Q09868) Hypothetical RNA-binding protein C12G12.03 i... 37 0.016
306U2AF2_MOUSE (P26369) Splicing factor U2AF 65 kDa subunit (U2 aux... 37 0.016
307U2AF2_HUMAN (P26368) Splicing factor U2AF 65 kDa subunit (U2 aux... 37 0.016
308SET1_SCHPO (Q9Y7R4) Histone-lysine N-methyltransferase, H3 lysin... 37 0.016
309NOP12_ASHGO (Q75BJ7) Nucleolar protein 12 37 0.016
310DAZL_BRARE (Q9YGW7) Deleted in azoospermia-like (DAZ-like protei... 36 0.021
311NUCL_MACFA (Q4R4J7) Nucleolin 36 0.021
312PM14_CAEEL (Q8ITY4) Pre-mRNA branch site p14-like protein 36 0.021
313NUCL_HUMAN (P19338) Nucleolin (Protein C23) 36 0.021
314NUCL_PONPY (Q5RF26) Nucleolin 36 0.021
315TADBP_HUMAN (Q13148) TAR DNA-binding protein 43 (TDP-43) 36 0.021
316RAVR2_HUMAN (Q9HCJ3) Protein raver-2 36 0.027
317HNRU2_HUMAN (P07029) Heterogeneous nuclear ribonucleoprotein UP2... 36 0.027
318PPIE_SCHMA (Q26548) Peptidyl-prolyl cis-trans isomerase E (EC 5.... 35 0.035
319RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (... 35 0.035
320MLO3_SCHPO (Q09330) Protein mlo3 35 0.046
321NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding pr... 35 0.046
322NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding pr... 35 0.046
323NONO_MOUSE (Q99K48) Non-POU domain-containing octamer-binding pr... 35 0.046
324NONO_RAT (Q5FVM4) Non-POU domain-containing octamer-binding prot... 35 0.046
325YQO4_CAEEL (Q09295) Putative RNA-binding protein EEED8.4 35 0.060
326RBM4_MOUSE (Q8C7Q4) RNA-binding protein 4 (RNA-binding motif pro... 35 0.060
327RAVR2_MOUSE (Q7TPD6) Protein raver-2 35 0.060
328G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protei... 35 0.060
329RX21_DROME (Q24491) RNA-binding protein Rsf1 (RNA-binding protei... 35 0.060
330RNP1_CAEEL (Q10667) RNA-binding protein rnp-1 35 0.060
331RBM4_HUMAN (Q9BWF3) RNA-binding protein 4 (RNA-binding motif pro... 35 0.060
332RBM4B_RAT (Q64LC9) RNA-binding protein 4B (RNA-binding motif pro... 35 0.060
333RBM4B_MOUSE (Q8VE92) RNA-binding protein 4B (RNA-binding motif p... 35 0.060
334RBM4_BOVIN (Q3MHX3) RNA-binding protein 4 (RNA-binding motif pro... 35 0.060
335G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protei... 35 0.060
336G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protei... 35 0.060
337G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protei... 35 0.060
338RBM4_RABIT (Q9BDY9) RNA-binding protein 4 (RNA-binding motif pro... 35 0.060
339RBM4B_HUMAN (Q9BQ04) RNA-binding protein 4B (RNA-binding motif p... 35 0.060
340PABPX_SCHPO (Q9P6M8) mRNA export factor crp79 (Polyadenylate-bin... 34 0.079
341IF34_YEAST (Q04067) Eukaryotic translation initiation factor 3 R... 34 0.079
342RBM8A_DROME (Q9V535) RNA-binding protein 8A (Protein tsunagi) 34 0.079
343SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich... 34 0.10
344YQOC_CAEEL (Q09301) Putative RNA-binding protein EEED8.12 34 0.10
345SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich... 34 0.10
346U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 aux... 34 0.10
347RB15B_MOUSE (Q6PHZ5) Putative RNA-binding protein 15B (RNA-bindi... 33 0.18
348RB15B_HUMAN (Q8NDT2) Putative RNA-binding protein 15B (RNA-bindi... 33 0.18
349U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 aux... 33 0.18
350DRBP1_RAT (Q8CFD1) Developmentally-regulated RNA-binding protein 1 33 0.23
351RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-ri... 32 0.30
352DRBP1_MOUSE (Q8BHN5) Developmentally-regulated RNA-binding prote... 32 0.30
353DRBP1_HUMAN (Q8IUH3) Developmentally-regulated RNA-binding prote... 32 0.30
354MSL1_YEAST (P40567) U2 small nuclear ribonucleoprotein B" 32 0.30
355MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing prote... 32 0.39
356DND1_HUMAN (Q8IYX4) Dead end protein homolog 1 (RNA-binding moti... 32 0.39
357MTHR1_YEAST (P46151) Methylenetetrahydrofolate reductase 1 (EC 1... 32 0.39
358DND1_XENLA (Q6DCB7) Dead end protein homolog 1 32 0.51
359DND1_BRARE (Q7T1H5) Dead end protein 1 32 0.51
360YRA1_YEAST (Q12159) RNA annealing protein YRA1 32 0.51
361SFRS1_CHICK (Q5ZML3) Splicing factor, arginine/serine-rich 1 31 0.67
362SFRS1_XENTR (Q6DII2) Splicing factor, arginine/serine-rich 1 31 0.67
363ARP2_PLAFA (P13824) Clustered-asparagine-rich protein (CARP) 31 0.67
364WSC4_YEAST (P38739) Cell wall integrity and stress response comp... 31 0.67
365SF1L1_BRARE (Q7SXP4) Splicing factor, arginine/serine-rich 1-lik... 31 0.67
366SFRS1_PONPY (Q5R7H2) Splicing factor, arginine/serine-rich 1 31 0.67
367SFRS1_MOUSE (Q6PDM2) Splicing factor, arginine/serine-rich 1 31 0.67
368SFRS1_HUMAN (Q07955) Splicing factor, arginine/serine-rich 1 (pr... 31 0.67
369SFRS1_BRARE (Q6NYA0) Splicing factor, arginine/serine-rich 1 31 0.87
370RBM5_HUMAN (P52756) RNA-binding protein 5 (RNA-binding motif pro... 30 1.1
371U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 aux... 30 1.5
372SFRS9_RAT (Q5PPI1) Splicing factor, arginine/serine-rich 9 30 1.5
373SFRS9_HUMAN (Q13242) Splicing factor, arginine/serine-rich 9 (Pr... 30 1.5
374SFRS9_MOUSE (Q9D0B0) Splicing factor, arginine/serine-rich 9 30 1.5
375LEM2_CAEEL (Q9XTB5) LEM protein 2 (Ce-MAN1) (MAN1 homolog) 30 1.5
376U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 aux... 30 1.5
377MRD1_CRYNE (Q5KJL5) Multiple RNA-binding domain-containing prote... 30 1.9
378PTBP1_HUMAN (P26599) Polypyrimidine tract-binding protein 1 (PTB... 30 1.9
379PTBP1_BOVIN (Q8WN55) Polypyrimidine tract-binding protein 1 (PTB) 30 1.9
380DND1_MOUSE (Q6VY05) Dead end protein homolog 1 (RNA-binding moti... 30 1.9
381TOLB_IDILO (Q5QYU0) Protein tolB precursor 29 2.5
382CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associate... 29 2.5
383RSP31_ARATH (P92964) Arginine/serine-rich splicing factor RSP31 29 2.5
384SERC_SPIOL (P52877) Phosphoserine aminotransferase, chloroplast ... 29 2.5
385CPB2_CAERE (Q6E3F2) Cytoplasmic polyadenylation element-binding ... 29 3.3
386TOLB_ACTPL (Q44156) Protein tolB (Fragment) 29 3.3
387CPB2_CAEJA (Q6E3F0) Cytoplasmic polyadenylation element-binding ... 29 3.3
388DAN4_YEAST (P47179) Cell wall protein DAN4 precursor 29 3.3
389SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein... 28 4.3
390TOLB_SALTY (Q8ZQT5) Protein tolB precursor 28 4.3
391TOLB_SALTI (Q8Z8C0) Protein tolB precursor 28 4.3
392TOLB_SALPA (Q5PCN2) Protein tolB precursor 28 4.3
393AREA_GIBFU (P78688) Nitrogen regulatory protein areA 28 4.3
394TOLB_DICD3 (Q934G6) Protein tolB precursor 28 5.6
395VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane an... 28 5.6
396PTBP1_RAT (Q00438) Polypyrimidine tract-binding protein 1 (PTB) ... 28 5.6
397HNRPC_MOUSE (Q9Z204) Heterogeneous nuclear ribonucleoproteins C1... 28 5.6
398GUN2_TRIRE (P07982) Endoglucanase EG-II precursor (EC 3.2.1.4) (... 28 5.6
399PTBP1_MOUSE (P17225) Polypyrimidine tract-binding protein 1 (PTB... 28 5.6
400HNRPC_HUMAN (P07910) Heterogeneous nuclear ribonucleoproteins C1... 28 5.6
401PRT1_PICAN (P12806) Putative PRT1 protein 28 7.4
402RBM10_RAT (P70501) RNA-binding protein 10 (RNA-binding motif pro... 28 7.4
403MUC1_YEAST (P08640) Mucin-like protein 1 precursor 28 7.4
404GAP_CAEEL (P34288) GTPase-activating protein GAP (CeGAP) 28 7.4
405CPB2_CAEEL (Q18317) Cytoplasmic polyadenylation element-binding ... 28 7.4
406SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pr... 28 7.4
407SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4 28 7.4
408YDQ7_SCHPO (O14200) Hypothetical protein C5D6.07c in chromosome I 28 7.4
409TOLB_SHIFL (Q83MM7) Protein tolB precursor 28 7.4
410TOLB_ECOLI (P0A855) Protein tolB precursor 28 7.4
411TOLB_ECOL6 (P0A856) Protein tolB precursor 28 7.4
412TOLB_ECO57 (P0A857) Protein tolB precursor 28 7.4
413RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subun... 28 7.4
414CCL26_HUMAN (Q9Y258) Small inducible cytokine A26 precursor (CCL... 27 9.6
415SCW1_SCHPO (O74452) Cell wall integrity protein scw1 (Strong cel... 27 9.6
416ALBUB_XENLA (P14872) Serum albumin B precursor (74 kDa serum alb... 27 9.6
417EKC1_SCHPO (O74511) Extragenic suppressor of kinetochore protein 1 27 9.6
418BUR1_CANAL (Q9Y7W4) Serine/threonine-protein kinase BUR1 (EC 2.7... 27 9.6
419SODM_AGABI (Q9P4T6) Superoxide dismutase [Mn], mitochondrial pre... 27 9.6
420CPB2_CAEBR (Q6E3F3) Cytoplasmic polyadenylation element-binding ... 27 9.6
421RBP1_DROME (Q02427) RNA-binding protein 1 27 9.6

>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast|
           precursor
          Length = 289

 Score =  136 bits (342), Expect = 1e-32
 Identities = 64/82 (78%), Positives = 72/82 (87%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           LK+FVGNLPF VDSAQLA LFE AG+VEMVEV+YD++TGRSRGFGFVTM SV EV AA +
Sbjct: 91  LKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQ 150

Query: 278 QFNGYTFQGRPLRVNSGPPPPR 343
           QFNGY   GRPLRVN+GPPPP+
Sbjct: 151 QFNGYELDGRPLRVNAGPPPPK 172



 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +V+VGNL + VD   L  LF + G V    V+YDR +GRS+GFGFVT  S +EV  A++ 
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264

Query: 281 FNGYTFQGRPLRVNSGPP-PPR 343
            +G    GR +RV+     PPR
Sbjct: 265 LDGADLDGRQIRVSEAEARPPR 286



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>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein cp29)
          Length = 342

 Score =  135 bits (340), Expect = 3e-32
 Identities = 67/113 (59%), Positives = 79/113 (69%)
 Frame = +2

Query: 5   AVSSEFDTXXXXXXXXXXXXXXXXXXXXXXXLKVFVGNLPFTVDSAQLAGLFEQAGSVEM 184
           AVSS+F+                        LK+FVGNL F VDSAQLA LFE AG+VEM
Sbjct: 68  AVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEM 127

Query: 185 VEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVNSGPPPPR 343
           VEV+YD++TGRSRGFGFVTM +  EV AA +QFNGY F+GRPLRVN+GPPPP+
Sbjct: 128 VEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPK 180



 Score = 74.3 bits (181), Expect = 7e-14
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +++VGNL + VD   L  LF + G V    V+YDR +GRS+GFGFVT+ S +EV  A+  
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317

Query: 281 FNGYTFQGRPLRVNSGPP-PPR 343
            NG    GR +RV+     PPR
Sbjct: 318 LNGADLDGRQIRVSEAEARPPR 339



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>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)|
          Length = 273

 Score =  128 bits (322), Expect = 3e-30
 Identities = 61/82 (74%), Positives = 70/82 (85%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           LK+FVGNLPF+ DSA LA LFE+AG+VEMVEV+YD++TGRSRGFGFVTM S EEV AA +
Sbjct: 87  LKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQ 146

Query: 278 QFNGYTFQGRPLRVNSGPPPPR 343
           QFNGY   GR LRVNSGPPP +
Sbjct: 147 QFNGYELDGRALRVNSGPPPEK 168



 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +V+VGNL + VD   L  LF + G V   +VVYDR +GRSRGFGFVT  S EEV  A+E 
Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 248

Query: 281 FNGYTFQGRPLRVNSGPP-PPR 343
            +G    GR +RV+     PPR
Sbjct: 249 LDGVDLNGRAIRVSPAEARPPR 270



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>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)|
          Length = 291

 Score =  125 bits (315), Expect = 2e-29
 Identities = 59/82 (71%), Positives = 71/82 (86%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           LK+FVGNLPF+VDSA LAGLFE+AG+VEMVEV+YD++TGRSRGFGFVTM + EEV AA +
Sbjct: 87  LKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQ 146

Query: 278 QFNGYTFQGRPLRVNSGPPPPR 343
           QFNGY   GR +RVN+GP P +
Sbjct: 147 QFNGYEIDGRAIRVNAGPAPAK 168



 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 39/81 (48%), Positives = 52/81 (64%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +V+VGNL + VD   L  LF + G+V   +VVYDR +GRSRGFGFVT  S +EV  A++ 
Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDS 267

Query: 281 FNGYTFQGRPLRVNSGPPPPR 343
            NG    GR +RV++    PR
Sbjct: 268 LNGVDLDGRSIRVSAAEERPR 288



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>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)|
          Length = 279

 Score =  124 bits (312), Expect = 4e-29
 Identities = 60/82 (73%), Positives = 69/82 (84%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           LK+FVGNL F+ DSA LA LFE+AG+VEMVEV+YD++TGRSRGFGFVTM S EEV AA +
Sbjct: 87  LKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQ 146

Query: 278 QFNGYTFQGRPLRVNSGPPPPR 343
           QFNGY   GR LRVNSGPPP +
Sbjct: 147 QFNGYELDGRALRVNSGPPPEK 168



 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +V+VGNL + VD   L  LF + G V   +VVYDR +GRSRGFGFVT  S EEV  A+E 
Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 254

Query: 281 FNGYTFQGRPLRVNSGPP-PPR 343
            +G    GR +RV+     PPR
Sbjct: 255 LDGVDLNGRAIRVSPAEARPPR 276



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>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)|
          Length = 292

 Score =  122 bits (307), Expect = 2e-28
 Identities = 57/82 (69%), Positives = 71/82 (86%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           LK+FVGNLPF+VDSA LAGLFE+AG+VE+VEV+YD+++GRSRGFGFVTM + EEV AA +
Sbjct: 88  LKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQ 147

Query: 278 QFNGYTFQGRPLRVNSGPPPPR 343
           QFNGY   GR +RVN+GP P +
Sbjct: 148 QFNGYEIDGRAIRVNAGPAPAK 169



 Score = 77.8 bits (190), Expect = 6e-15
 Identities = 39/81 (48%), Positives = 52/81 (64%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +V+VGNL + VD   L  LF + G+V   +VVYDR +GRSRGFGFVT  S +EV  A++ 
Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDS 268

Query: 281 FNGYTFQGRPLRVNSGPPPPR 343
            NG    GR +RV++    PR
Sbjct: 269 LNGIDLDGRSIRVSAAEERPR 289



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>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)|
          Length = 233

 Score = 99.4 bits (246), Expect = 2e-21
 Identities = 48/78 (61%), Positives = 57/78 (73%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVGNLP+ VDS +LAG+F+ AG VE+ EV+Y+R T RSRGFGFVTM +VEE   AVE 
Sbjct: 56  KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115

Query: 281 FNGYTFQGRPLRVNSGPP 334
            NGY   GR L VN   P
Sbjct: 116 LNGYDMDGRQLTVNKAAP 133



 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 42/81 (51%), Positives = 52/81 (64%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +V+VGNLP+ VD+++L  LF + G V    VV DR TGRSRGFGFVTM S  EV  A+  
Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 209

Query: 281 FNGYTFQGRPLRVNSGPPPPR 343
            +G T  GR +RVN     PR
Sbjct: 210 LDGQTLDGRAVRVNVAEERPR 230



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>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor|
           (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3)
           (AtRBP33) (RNA-binding protein cp31)
          Length = 329

 Score = 94.0 bits (232), Expect = 8e-20
 Identities = 47/78 (60%), Positives = 57/78 (73%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVGNL + V+S  LA LFEQAG+VE+ EV+Y+R T +SRGFGFVTM SV+E   AVE+
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210

Query: 281 FNGYTFQGRPLRVNSGPP 334
           FN Y   GR L VN   P
Sbjct: 211 FNRYDLNGRLLTVNKAAP 228



 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +V+VGNLP+ VD+ +L  LF + G V    VVYDR TGRSRGFGFVTM  V+E+  A+  
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304

Query: 281 FNGYTFQGRPLRVN-SGPPPPR 343
            +G   +GR +RVN +   PPR
Sbjct: 305 LDGQNLEGRAIRVNVAEERPPR 326



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>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)|
          Length = 276

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 46/78 (58%), Positives = 56/78 (71%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVGNLP+ +DS  LA LF+QAG VE+ EV+Y+R T RSRGFGFVTM +VEE   AVE 
Sbjct: 98  KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 157

Query: 281 FNGYTFQGRPLRVNSGPP 334
           ++ Y   GR L VN   P
Sbjct: 158 YSQYDLNGRLLTVNKAAP 175



 Score = 82.0 bits (201), Expect = 3e-16
 Identities = 37/81 (45%), Positives = 54/81 (66%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +++VGN+P+ +D A+L  +F + G V    VV+DR +GRSRGFGFVTM S  E++ A+  
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251

Query: 281 FNGYTFQGRPLRVNSGPPPPR 343
            +G T  GR +RVN+    PR
Sbjct: 252 LDGQTLDGRTIRVNAAEERPR 272



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>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor|
          Length = 315

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 47/74 (63%), Positives = 55/74 (74%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVGNLP+ VDS  LA LFEQAG VE+ EV+Y+R T +SRGFGFVTM +VEE   AVE 
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196

Query: 281 FNGYTFQGRPLRVN 322
           +N Y   GR L VN
Sbjct: 197 YNRYDVNGRLLTVN 210



 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 37/74 (50%), Positives = 51/74 (68%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +++VGN+P+ +D A+L  LF + G V    VVYDR TGRSRGFGFVTM S  E++ A+  
Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIAN 290

Query: 281 FNGYTFQGRPLRVN 322
            +G +  GR +RVN
Sbjct: 291 LDGQSLDGRTIRVN 304



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>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor|
          Length = 324

 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 44/81 (54%), Positives = 60/81 (74%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +++VGNLPF++ S+QL+ +F +AG+V  VE+VYDR+T RSRGF FVTMGSVEE   A+  
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174

Query: 281 FNGYTFQGRPLRVNSGPPPPR 343
           F+G    GR ++VN  P  PR
Sbjct: 175 FDGSQVGGRTVKVNF-PEVPR 194



 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 30/74 (40%), Positives = 44/74 (59%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K++V NL + + S  L   F         +V+YDR +GRSRGFGF+T  S E + +A++ 
Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDT 277

Query: 281 FNGYTFQGRPLRVN 322
            N    +GRPLR+N
Sbjct: 278 MNEVELEGRPLRLN 291



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>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast|
           precursor (PSRP-2)
          Length = 260

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 32/79 (40%), Positives = 54/79 (68%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +++VGN+P  +++ +L  + E+ G++E+ EV+YD+ +GRSR FGFVTM +VE+  A +E+
Sbjct: 85  RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144

Query: 281 FNGYTFQGRPLRVNSGPPP 337
            N     GR ++VN    P
Sbjct: 145 LNDTEIGGRKIKVNITEKP 163



 Score = 57.4 bits (137), Expect = 9e-09
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           KV++GNL  TV +  L   F + G V   +V     T +S GFGFV+  S EEV AA++ 
Sbjct: 185 KVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQA 244

Query: 281 FNGYTFQGRPLRVN 322
            N    +G+ +RVN
Sbjct: 245 LNNSVLEGQKIRVN 258



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>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA|
          Length = 101

 Score = 70.9 bits (172), Expect = 8e-13
 Identities = 34/79 (43%), Positives = 49/79 (62%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++VGNL + V  A L  +F + GSV+ V++  DR TGR RGFGFV + +  E  AA+E
Sbjct: 1   MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIE 60

Query: 278 QFNGYTFQGRPLRVNSGPP 334
             +G  + GR L+VN   P
Sbjct: 61  ALDGAEWMGRDLKVNKAKP 79



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>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of|
           activating protein 1 and estrogen receptors)
           (Coactivator of AP-1 and ERs) (Transcription coactivator
           CAPER)
          Length = 530

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 29/74 (39%), Positives = 48/74 (64%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           ++++VG+L F +    L G+FE  G +E ++++ D  TGRS+G+GF+T    E    A+E
Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309

Query: 278 QFNGYTFQGRPLRV 319
           Q NG+   GRP++V
Sbjct: 310 QLNGFELAGRPMKV 323



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>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular|
           carcinoma protein 1) (Splicing factor HCC1)
          Length = 530

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 29/74 (39%), Positives = 48/74 (64%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           ++++VG+L F +    L G+FE  G +E ++++ D  TGRS+G+GF+T    E    A+E
Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309

Query: 278 QFNGYTFQGRPLRV 319
           Q NG+   GRP++V
Sbjct: 310 QLNGFELAGRPMKV 323



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>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein|
           23) (RNA-binding region-containing protein 4) (Splicing
           factor SF2)
          Length = 439

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 29/74 (39%), Positives = 47/74 (63%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           ++++VG+L F +    L G+FE  G ++ + ++ D  TGRS+G+GF+T    E    A+E
Sbjct: 263 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 322

Query: 278 QFNGYTFQGRPLRV 319
           Q NG+   GRP+RV
Sbjct: 323 QLNGFELAGRPMRV 336



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>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 616

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGN+P+     QL  +F + GSV    +VYDR TG+ +G+GF      E   +A+   
Sbjct: 18  VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77

Query: 284 NGYTFQGRPLRVNS 325
           NG  F GR LRV++
Sbjct: 78  NGREFSGRALRVDN 91



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>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant|
           (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit,
           tau variant) (TauCstF-64)
          Length = 632

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGN+P+     QL  +F + GSV    +VYDR TG+ +G+GF      E   +A+   
Sbjct: 18  VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77

Query: 284 NGYTFQGRPLRVNS 325
           NG  F GR LRV++
Sbjct: 78  NGREFSGRALRVDN 91



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>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 572

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGN+P+     QL  +F + G V    +VYDR TG+ +G+GF      E   +A+   
Sbjct: 18  VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77

Query: 284 NGYTFQGRPLRVNS 325
           NG  F GR LRV++
Sbjct: 78  NGREFSGRALRVDN 91



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>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 580

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGN+P+     QL  +F + G V    +VYDR TG+ +G+GF      E   +A+   
Sbjct: 18  VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77

Query: 284 NGYTFQGRPLRVNS 325
           NG  F GR LRV++
Sbjct: 78  NGREFSGRALRVDN 91



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>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGN+P+     QL  +F + G V    +VYDR TG+ +G+GF      E   +A+   
Sbjct: 18  VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77

Query: 284 NGYTFQGRPLRVNS 325
           NG  F GR LRV++
Sbjct: 78  NGREFSGRALRVDN 91



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>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 577

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGN+P+     QL  +F + G V    +VYDR TG+ +G+GF      E   +A+   
Sbjct: 18  VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77

Query: 284 NGYTFQGRPLRVNS 325
           NG  F GR LRV++
Sbjct: 78  NGREFSGRALRVDN 91



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>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial|
           precursor (AtGRP2)
          Length = 158

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 34/84 (40%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L +  D A L   F   G V   +V+ DR TGRSRGFGFV         AA+ +
Sbjct: 36  KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95

Query: 281 FNGYTFQGRPLRVNSG---PPPPR 343
            +G    GR +RVN     P  PR
Sbjct: 96  MDGKELNGRHIRVNPANDRPSAPR 119



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>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3) (RNPL)
          Length = 157

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 32/74 (43%), Positives = 41/74 (55%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L F  D   L   F   G +  V VV DR T RSRGFGF+T  + E  + A+  
Sbjct: 7   KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66

Query: 281 FNGYTFQGRPLRVN 322
            NG +  GR +RV+
Sbjct: 67  MNGESLDGRQIRVD 80



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>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP)
          Length = 172

 Score = 61.6 bits (148), Expect = 5e-10
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L F  +   L  +F + G +  V VV DR T RSRGFGFVT  ++++   A+  
Sbjct: 7   KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query: 281 FNGYTFQGRPLRVN 322
            NG +  GR +RV+
Sbjct: 67  MNGKSVDGRQIRVD 80



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>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 61.6 bits (148), Expect = 5e-10
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L F  +   L  +F + G +  V VV DR T RSRGFGFVT  ++++   A+  
Sbjct: 7   KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query: 281 FNGYTFQGRPLRVN 322
            NG +  GR +RV+
Sbjct: 67  MNGKSVDGRQIRVD 80



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>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L F  +   L  +F + G +  V VV DR T RSRGFGFVT  ++++   A+  
Sbjct: 7   KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query: 281 FNGYTFQGRPLRVN 322
            NG +  GR +RV+
Sbjct: 67  MNGKSVDGRQIRVD 80



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>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L F  +   L  +F + G +  V VV DR T RSRGFGFVT  ++++   A+  
Sbjct: 7   KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query: 281 FNGYTFQGRPLRVN 322
            NG +  GR +RV+
Sbjct: 67  MNGKSVDGRQIRVD 80



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>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (A18 hnRNP)
          Length = 172

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 31/74 (41%), Positives = 44/74 (59%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L F  +   L  +F + G +  V VV DR T RSRGFGFVT  ++++   A+  
Sbjct: 7   KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66

Query: 281 FNGYTFQGRPLRVN 322
            NG +  GR +RV+
Sbjct: 67  MNGKSVDGRQIRVD 80



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>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein|
           3)
          Length = 153

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 32/74 (43%), Positives = 41/74 (55%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L F  D   L   F   G +  V VV DR T RSRGFGF+T  + E  + A+  
Sbjct: 7   KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66

Query: 281 FNGYTFQGRPLRVN 322
            NG +  GR +RV+
Sbjct: 67  MNGESLDGRQIRVD 80



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>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 30/74 (40%), Positives = 42/74 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           + FVG L +    A+L   F Q G V   +++ DR TGRSRGFGFVT    + +  A+++
Sbjct: 7   RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66

Query: 281 FNGYTFQGRPLRVN 322
            NG    GR + VN
Sbjct: 67  MNGKELDGRTITVN 80



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>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A|
          Length = 166

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 31/74 (41%), Positives = 40/74 (54%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           + FVG L +  D   L   F Q G V   +++ DR TGRSRGFGFVT    + +  A+E 
Sbjct: 9   RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68

Query: 281 FNGYTFQGRPLRVN 322
            NG    GR + VN
Sbjct: 69  MNGQDLDGRSITVN 82



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>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A|
          Length = 169

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 30/74 (40%), Positives = 40/74 (54%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           + FVG L +  D   L   F Q G +   +++ DR TGRSRGFGFVT    + +  A+E 
Sbjct: 9   RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68

Query: 281 FNGYTFQGRPLRVN 322
            NG    GR + VN
Sbjct: 69  MNGQDLDGRSITVN 82



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>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2|
          Length = 168

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 31/74 (41%), Positives = 41/74 (55%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           + FVG L +  ++  L   F   G V   +V+ DR TGRSRGFGFVT  S + +  A+E 
Sbjct: 9   RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68

Query: 281 FNGYTFQGRPLRVN 322
            NG    GR + VN
Sbjct: 69  MNGKELDGRNITVN 82



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>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7|
          Length = 176

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 31/74 (41%), Positives = 40/74 (54%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           + FVG L +  D   L   F Q G V   +++ DR TGRSRGFGFVT    + +  A+E 
Sbjct: 9   RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68

Query: 281 FNGYTFQGRPLRVN 322
            NG    GR + VN
Sbjct: 69  MNGQDLDGRSITVN 82



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>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein|
          Length = 157

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 30/74 (40%), Positives = 39/74 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           + FVG L +   +  L   F   G +   +V+ DR TGRSRGFGFVT  S   +  A+E 
Sbjct: 9   RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68

Query: 281 FNGYTFQGRPLRVN 322
            NG    GR + VN
Sbjct: 69  MNGKELDGRNITVN 82



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>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein|
          Length = 157

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 29/74 (39%), Positives = 40/74 (54%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           + FVG L +  +   L   F Q G +   +++ DR TGRSRGFGFVT    + +  A+E 
Sbjct: 7   RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66

Query: 281 FNGYTFQGRPLRVN 322
            NG    GR + VN
Sbjct: 67  MNGQELDGRNITVN 80



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>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich|
           RNA-binding protein CIRP) (xCIRP)
          Length = 163

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L F  +   L   F + G +  V VV DR T RSRGFGFVT  +V++   A+  
Sbjct: 6   KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65

Query: 281 FNGYTFQGRPLRVN 322
            NG +  GR +RV+
Sbjct: 66  MNGKSVDGRQIRVD 79



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>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 57.4 bits (137), Expect = 9e-09
 Identities = 29/74 (39%), Positives = 41/74 (55%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           + FVG L +  +   L   F Q G V   +++ DR +GRSRGFGFVT    + +  A+E+
Sbjct: 7   RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66

Query: 281 FNGYTFQGRPLRVN 322
            NG    GR + VN
Sbjct: 67  MNGKELDGRVITVN 80



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>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 25/73 (34%), Positives = 41/73 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVG LP+ +    +  +F Q G +  + +V D+ TG+S+GF F+          AV+ F
Sbjct: 38  IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97

Query: 284 NGYTFQGRPLRVN 322
           NG   +GR +RV+
Sbjct: 98  NGIKIKGRTIRVD 110



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>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 519

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 28/73 (38%), Positives = 44/73 (60%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL    + A L  LF   G+V+ V++V D  T + +G+GFV+M + +E A A+   
Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499

Query: 284 NGYTFQGRPLRVN 322
           NGYT   R L+V+
Sbjct: 500 NGYTMGNRVLQVS 512



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMT-------------GRSRGFGFVTM 244
           + V  LP T+   ++  LF   G +E V+++ D+               G+S G+GFV  
Sbjct: 187 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 246

Query: 245 GSVEEVAAAVEQFNGYTFQGRPLRVNSGPP 334
              ++   AV   NG   Q + ++V+   P
Sbjct: 247 VRPQDAEQAVNVLNGLRLQNKTIKVSFARP 276



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTG-RSRGFGFVTMGSVEEVAAAVEQ 280
           ++V  LP T+   +L  +F   G++    ++ +     +++G GF+     EE   A+  
Sbjct: 286 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 345

Query: 281 FNGYT 295
            NG T
Sbjct: 346 LNGTT 350



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>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)|
          Length = 483

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 28/73 (38%), Positives = 44/73 (60%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL    + A L  LF   G+V+ V++V D  T + +G+GFV+M + +E A A+   
Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463

Query: 284 NGYTFQGRPLRVN 322
           NGYT   R L+V+
Sbjct: 464 NGYTMGNRVLQVS 476



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMT-------------GRSRGFGFVTM 244
           + V  LP T+   ++  LF   G +E V+++ D+               G+S G+GFV  
Sbjct: 151 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 210

Query: 245 GSVEEVAAAVEQFNGYTFQGRPLRVNSGPP 334
              ++   AV   NG   Q + ++V+   P
Sbjct: 211 VRPQDAEQAVNVLNGLRLQNKTIKVSFARP 240



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTG-RSRGFGFVTMGSVEEVAAAVEQ 280
           ++V  LP T+   +L  +F   G++    ++ +     +++G GF+     EE   A+  
Sbjct: 250 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 309

Query: 281 FNGYT 295
            NG T
Sbjct: 310 LNGTT 314



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>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription|
           termination factor ctf1)
          Length = 363

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 29/80 (36%), Positives = 40/80 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGN+P+ V   Q+  +F Q G V+  ++V D  TG  +G+GF      E  A AV + 
Sbjct: 9   VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKL 68

Query: 284 NGYTFQGRPLRVNSGPPPPR 343
           N      R +RV      PR
Sbjct: 69  NNSELGPRKIRVEFPSNDPR 88



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>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein|
           PUB1 (ARS consensus-binding protein ACBP-60)
           (Poly(U)-binding protein) (Poly uridylate-binding
           protein)
          Length = 452

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 28/73 (38%), Positives = 40/73 (54%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVG+L   VD   L   F+   S     V++D  TG SRG+GFV+  S ++   A++  
Sbjct: 163 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 222

Query: 284 NGYTFQGRPLRVN 322
            G    GRPLR+N
Sbjct: 223 QGQDLNGRPLRIN 235



 Score = 32.7 bits (73), Expect = 0.23
 Identities = 20/74 (27%), Positives = 31/74 (41%)
 Frame = +2

Query: 107 FVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFN 286
           ++GN+P     A L  LF+  G       + D      +G  F+   + E+ A  +    
Sbjct: 343 YIGNIPHFATEADLIPLFQNFG------FILDFKHYPEKGCCFIKYDTHEQAAVCIVALA 396

Query: 287 GYTFQGRPLRVNSG 328
            + FQGR LR   G
Sbjct: 397 NFPFQGRNLRTGWG 410



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>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA|
           binding protein SEB4) (CLL-associated antigen KW-5)
          Length = 216

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 31/74 (41%), Positives = 38/74 (51%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG LP+    A L   FE  G +E   V+ DR TG+SRG+GFVTM        A + 
Sbjct: 12  KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71

Query: 281 FNGYTFQGRPLRVN 322
            N     GR   VN
Sbjct: 72  PNP-IIDGRKANVN 84



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>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PABP 2)
          Length = 629

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 27/72 (37%), Positives = 43/72 (59%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L F V  +QL   F Q G+V  V V  D +T RS G+G+V   + ++ A A+++ 
Sbjct: 38  LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97

Query: 284 NGYTFQGRPLRV 319
           N     G+P+RV
Sbjct: 98  NYIPLYGKPIRV 109



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 23/68 (33%), Positives = 35/68 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V+V NL  +     L   F + G +    V+ D   G+S+GFGFV   + ++ A AVE  
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-EGKSKGFGFVNFENADDAARAVESL 275

Query: 284 NGYTFQGR 307
           NG+ F  +
Sbjct: 276 NGHKFDDK 283



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 21/72 (29%), Positives = 37/72 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL  ++D   L   F   G++   +V  D  +G+S+G+GFV   + E    A+E+ 
Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKL 184

Query: 284 NGYTFQGRPLRV 319
           NG     + + V
Sbjct: 185 NGMLLNDKQVYV 196



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 23/72 (31%), Positives = 38/72 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V NL  ++   +L  +F   G+V   +V+ D   G S+G GFV   + EE   A+ Q 
Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEATEAMSQL 378

Query: 284 NGYTFQGRPLRV 319
           +G   + +PL V
Sbjct: 379 SGKMIESKPLYV 390



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>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding|
           protein RBP1)
          Length = 672

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFE-QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +FVG+L  T   A L  LF+ +  SV+ V V+ D +TG SR FGFV  G  +E   A+ +
Sbjct: 194 LFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIE 253

Query: 281 FNGYTFQGRPLRVNSGPP 334
            +G  FQGR LRV    P
Sbjct: 254 MSGKWFQGRALRVAYATP 271



 Score = 32.0 bits (71), Expect = 0.39
 Identities = 21/77 (27%), Positives = 33/77 (42%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVG L       QL  LF+  G +  V +         +  GFV      +  A+++  
Sbjct: 362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRIP------NGKNCGFVKFEKRIDAEASIQGL 415

Query: 284 NGYTFQGRPLRVNSGPP 334
            G+   G P+R++ G P
Sbjct: 416 QGFIVGGSPIRLSWGRP 432



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>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 430

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 29/72 (40%), Positives = 42/72 (58%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGNLP+ V+ + +   F   GS+  V +V D+MTG  +GFG+V   + + V  A+ + 
Sbjct: 289 VFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLAL-KL 347

Query: 284 NGYTFQGRPLRV 319
           N     GR LRV
Sbjct: 348 NNSELMGRKLRV 359



 Score = 30.8 bits (68), Expect = 0.87
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMV 187
           VFVGNLP T +  +L   F++ G +E V
Sbjct: 187 VFVGNLPVTCNKKKLKSFFKEYGQIESV 214



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>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding|
           protein SEB4)
          Length = 237

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 31/74 (41%), Positives = 38/74 (51%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG LP+    A L   FE  G +E   V+ DR TG+SRG+GFVTM        A + 
Sbjct: 33  KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92

Query: 281 FNGYTFQGRPLRVN 322
            N     GR   VN
Sbjct: 93  PNP-IIDGRKANVN 105



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>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2|
          Length = 322

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 24/73 (32%), Positives = 41/73 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+G LP+ +    +  +F Q G +  + +V D+ TG+S+GF F+          AV+ F
Sbjct: 38  IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97

Query: 284 NGYTFQGRPLRVN 322
           NG   +GR +RV+
Sbjct: 98  NGIKIKGRTIRVD 110



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>GAR2_SCHPO (P41891) Protein gar2|
          Length = 500

 Score = 55.1 bits (131), Expect = 4e-08
 Identities = 27/77 (35%), Positives = 40/77 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGNL F      L+  F   G ++ + +  D  +GR +GFG+VT   ++     VE  
Sbjct: 368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-M 426

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG+   GRP R++   P
Sbjct: 427 NGHFIAGRPCRLDFSTP 443



 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 27/79 (34%), Positives = 40/79 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVG L + VD   L   FE+ G++    V+ D  +GRS+G+G+V   + E   AAV   
Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324

Query: 284 NGYTFQGRPLRVNSGPPPP 340
                 GR + ++   P P
Sbjct: 325 GTKEIDGRMVNLDLSNPRP 343



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>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)|
          Length = 367

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 30/73 (41%), Positives = 42/73 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL    D + L  LF   G+V  V+V+ D  T + +GFGFVTM + +E A A+   
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345

Query: 284 NGYTFQGRPLRVN 322
           NGY    R L+V+
Sbjct: 346 NGYRLGERVLQVS 358



 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 22/77 (28%), Positives = 38/77 (49%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +   LF   G +E  ++V D++TG+S G+GFV      +   A+   
Sbjct: 41  LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 101 NGLKLQTKTIKVSYARP 117



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP T+   ++  LF Q G +    ++ D+ TG SRG GF+      E   A++  
Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGL 186

Query: 284 NG 289
           NG
Sbjct: 187 NG 188



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>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic|
           cerebellar degeneration-associated antigen)
           (Paraneoplastic limbic encephalitis antigen 21)
          Length = 367

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 30/73 (41%), Positives = 42/73 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL    D + L  LF   G+V  V+V+ D  T + +GFGFVTM + +E A A+   
Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345

Query: 284 NGYTFQGRPLRVN 322
           NGY    R L+V+
Sbjct: 346 NGYRLGERVLQVS 358



 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 22/77 (28%), Positives = 38/77 (49%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +   LF   G +E  ++V D++TG+S G+GFV      +   A+   
Sbjct: 41  LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 101 NGLKLQTKTIKVSYARP 117



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP T+   ++  LF Q G +    ++ D++TG SRG GF+      E   A++  
Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186

Query: 284 NG 289
           NG
Sbjct: 187 NG 188



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>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)|
          Length = 414

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 26/79 (32%), Positives = 40/79 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVG L +++D   L   FE  G V    V+Y+R T RSRG+G+V   +      A+++ 
Sbjct: 170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEM 229

Query: 284 NGYTFQGRPLRVNSGPPPP 340
            G    GRP+  +     P
Sbjct: 230 QGKEIDGRPINCDMSTSKP 248



 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 24/79 (30%), Positives = 40/79 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+GNL F  D   +  LF + G V  V +     T + +GFG+V   ++E+   A++  
Sbjct: 269 LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDAL 328

Query: 284 NGYTFQGRPLRVNSGPPPP 340
            G     RP+R++   P P
Sbjct: 329 QGEYIDNRPVRLDFSSPRP 347



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>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 385

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 30/73 (41%), Positives = 42/73 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL    D + L  LF   G+V  V+V+ D  T + +GFGFVTM + +E A A+   
Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363

Query: 284 NGYTFQGRPLRVN 322
           NGY    R L+V+
Sbjct: 364 NGYRLGDRVLQVS 376



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 22/77 (28%), Positives = 39/77 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +   LF   G +E  ++V D++TG+S G+GFV     ++   A+   
Sbjct: 53  LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 113 NGLRLQTKTIKVSYARP 129



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP T+   +L  LF Q G +    ++ D++TG SRG GF+      E   A++  
Sbjct: 139 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 198

Query: 284 NG 289
           NG
Sbjct: 199 NG 200



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>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 380

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 30/73 (41%), Positives = 42/73 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL    D + L  LF   G+V  V+V+ D  T + +GFGFVTM + +E A A+   
Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358

Query: 284 NGYTFQGRPLRVN 322
           NGY    R L+V+
Sbjct: 359 NGYRLGDRVLQVS 371



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 22/77 (28%), Positives = 39/77 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +   LF   G +E  ++V D++TG+S G+GFV     ++   A+   
Sbjct: 48  LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 108 NGLRLQTKTIKVSYARP 124



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP T+   +L  LF Q G +    ++ D++TG SRG GF+      E   A++  
Sbjct: 134 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 193

Query: 284 NG 289
           NG
Sbjct: 194 NG 195



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>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis|
           antigen HuD) (Hu-antigen D)
          Length = 373

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 30/73 (41%), Positives = 42/73 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL    D + L  LF   G+V  V+V+ D  T + +GFGFVTM + +E A A+   
Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351

Query: 284 NGYTFQGRPLRVN 322
           NGY    R L+V+
Sbjct: 352 NGYRLGDRVLQVS 364



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 22/77 (28%), Positives = 39/77 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +   LF   G +E  ++V D++TG+S G+GFV     ++   A+   
Sbjct: 41  LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 101 NGLRLQTKTIKVSYARP 117



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP T+   +L  LF Q G +    ++ D++TG SRG GF+      E   A++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186

Query: 284 NG 289
           NG
Sbjct: 187 NG 188



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>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 428

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 30/72 (41%), Positives = 41/72 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGNLP+ VD + L   F   GS+  V +V + +TG  RGFG+V   + + V  A+ + 
Sbjct: 287 VFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KL 345

Query: 284 NGYTFQGRPLRV 319
           N     GR LRV
Sbjct: 346 NNSELMGRKLRV 357



 Score = 31.2 bits (69), Expect = 0.67
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMV 187
           VFVGNLP T +  +L   F++ G VE V
Sbjct: 185 VFVGNLPVTCNKKKLKSFFKEYGQVESV 212



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>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)|
          Length = 359

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 29/73 (39%), Positives = 42/73 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL    D + L  +F   G+V  V+V+ D  T + +GFGFVTM + +E A A+   
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337

Query: 284 NGYTFQGRPLRVN 322
           NGY    R L+V+
Sbjct: 338 NGYRLGDRVLQVS 350



 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 22/72 (30%), Positives = 38/72 (52%)
 Frame = +2

Query: 119 LPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTF 298
           LP  +   +L  LF   G +E  ++V D++TG+S G+GFV     ++   A+   NG   
Sbjct: 46  LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL 105

Query: 299 QGRPLRVNSGPP 334
           Q + ++V+   P
Sbjct: 106 QTKTIKVSYARP 117



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP T+   +L  LF Q G +    ++ D++TG SRG GF+      E   A++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186

Query: 284 NG 289
           NG
Sbjct: 187 NG 188



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>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2|
          Length = 359

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 29/73 (39%), Positives = 42/73 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL    D + L  +F   G+V  V+V+ D  T + +GFGFVTM + +E A A+   
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337

Query: 284 NGYTFQGRPLRVN 322
           NGY    R L+V+
Sbjct: 338 NGYRLGDRVLQVS 350



 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 23/77 (29%), Positives = 40/77 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +L  LF   G +E  ++V D++TG+S G+GFV     ++   A+   
Sbjct: 41  LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 101 NGLRLQTKTIKVSYARP 117



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP T+   +L  LF Q G +    ++ D++TG SRG GF+      E   A++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186

Query: 284 NG 289
           NG
Sbjct: 187 NG 188



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>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Hel-N1)
          Length = 359

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 29/73 (39%), Positives = 42/73 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL    D + L  +F   G+V  V+V+ D  T + +GFGFVTM + +E A A+   
Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337

Query: 284 NGYTFQGRPLRVN 322
           NGY    R L+V+
Sbjct: 338 NGYRLGDRVLQVS 350



 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 23/77 (29%), Positives = 40/77 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +L  LF   G +E  ++V D++TG+S G+GFV     ++   A+   
Sbjct: 41  LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 101 NGLRLQTKTIKVSYARP 117



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP T+   +L  LF Q G +    ++ D++TG SRG GF+      E   A++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186

Query: 284 NG 289
           NG
Sbjct: 187 NG 188



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>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like|
           neuronal protein 1) (Nervous system-specific RNA-binding
           protein Mel-N1)
          Length = 360

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 29/73 (39%), Positives = 42/73 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL    D + L  +F   G+V  V+V+ D  T + +GFGFVTM + +E A A+   
Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338

Query: 284 NGYTFQGRPLRVN 322
           NGY    R L+V+
Sbjct: 339 NGYRLGDRVLQVS 351



 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 23/77 (29%), Positives = 40/77 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +L  LF   G +E  ++V D++TG+S G+GFV     ++   A+   
Sbjct: 41  LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 101 NGLRLQTKTIKVSYARP 117



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/62 (33%), Positives = 33/62 (53%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP T+   +L  LF Q G +    ++ D++TG SRG GF+      E   A++  
Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186

Query: 284 NG 289
           NG
Sbjct: 187 NG 188



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>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2|
           (G-strand-binding protein 2) (RAP1 localization factor
           6)
          Length = 427

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 28/76 (36%), Positives = 44/76 (57%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +VF+ NLP++++   L  +F++ G V   +V  D   G SRGFG V   + +E+  A++ 
Sbjct: 220 EVFIINLPYSMNWQSLKDMFKECGHVLRADVELD-FNGFSRGFGSVIYPTEDEMIRAIDT 278

Query: 281 FNGYTFQGRPLRVNSG 328
           FNG   +GR L V  G
Sbjct: 279 FNGMEVEGRVLEVREG 294



 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 27/79 (34%), Positives = 35/79 (44%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL F      L  LF   G V   +++  +  G  RG G V     E V  A+ +F
Sbjct: 124 IFVRNLTFDCTPEDLKELFGTVGEVVEADIITSK--GHHRGMGTVEFTKNESVQDAISKF 181

Query: 284 NGYTFQGRPLRVNSGPPPP 340
           +G  F  R L V    PPP
Sbjct: 182 DGALFMDRKLMVRQDNPPP 200



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>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1|
          Length = 858

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 25/73 (34%), Positives = 38/73 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+ NLPF     ++   FE  G+V+ V +  D+ T  S+G  FV+        AA   
Sbjct: 315 RLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRA 374

Query: 281 FNGYTFQGRPLRV 319
            +G TFQGR L +
Sbjct: 375 KDGSTFQGRLLHL 387



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ + NLPF      +  LF   G ++ V +   +    +RGFGFV   +V E  +A+E 
Sbjct: 720 KILIKNLPFEATKRDIRDLFSSQGQLKSVRLP-KKFDNTTRGFGFVEYSTVREAQSAMEA 778

Query: 281 FNGYTFQGRPL 313
                  GR L
Sbjct: 779 LKHTHLLGRHL 789



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>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L    +   L  +F + G +  + ++ DR T +SRGF FVT+ S  +   A   
Sbjct: 9   KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68

Query: 281 FNGYTFQGRPLRVNS-----------GPPPP 340
            NG +  G+ ++V             GPPPP
Sbjct: 69  MNGKSLDGKAIKVEQATKPFFESGRRGPPPP 99



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>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)|
          Length = 326

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 28/73 (38%), Positives = 41/73 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL    D   L  +F   G+V  V+V+ D  T + +GFGFVTM + EE A A+   
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305

Query: 284 NGYTFQGRPLRVN 322
           NGY    + L+V+
Sbjct: 306 NGYRLGDKILQVS 318



 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 22/77 (28%), Positives = 39/77 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +L  LF   G VE  +++ D++ G S G+GFV   + ++   A+   
Sbjct: 22  LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 82  NGLRLQSKTIKVSYARP 98



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++  LP T+    +  +F + G +    V+ D+ TG SRG  F+      E   A+  F
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167

Query: 284 NGYTFQG--RPLRVNSGPPP 337
           NG+   G   P+ V     P
Sbjct: 168 NGHKPPGSSEPITVKFAANP 187



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>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome) (Glycoprotein
           p43)
          Length = 391

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L    +   L  +F + G +  V ++ DR T +SRGF FVT  S  +   A   
Sbjct: 9   KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68

Query: 281 FNGYTFQGRPLRVNS-----------GPPPP 340
            NG +  G+ ++V             GPPPP
Sbjct: 69  MNGKSLDGKAIKVEQATKPSFESGRRGPPPP 99



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>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)|
          Length = 375

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 28/72 (38%), Positives = 41/72 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGNLP+ ++ + L   F   GS+  V +V + +TG  RGFG+V   + + V  A+ + 
Sbjct: 293 VFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KL 351

Query: 284 NGYTFQGRPLRV 319
           N     GR LRV
Sbjct: 352 NNSELMGRKLRV 363



 Score = 31.2 bits (69), Expect = 0.67
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMV 187
           VFVGNLP T +  +L   F++ G VE V
Sbjct: 191 VFVGNLPVTCNKKKLKSFFKEYGQVESV 218



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>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like|
           generic protein) (MelG)
          Length = 326

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 28/73 (38%), Positives = 41/73 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL    D   L  +F   G+V  V+V+ D  T + +GFGFVTM + EE A A+   
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305

Query: 284 NGYTFQGRPLRVN 322
           NGY    + L+V+
Sbjct: 306 NGYRLGDKILQVS 318



 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 22/77 (28%), Positives = 39/77 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +L  LF   G VE  +++ D++ G S G+GFV   + ++   A+   
Sbjct: 22  LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG   Q + ++V+   P
Sbjct: 82  NGLRLQSKTIKVSYARP 98



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>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I|
          Length = 297

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 24/72 (33%), Positives = 41/72 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV  +   +   +L  +F + G+V  V ++ + +T  SRGFGF++  +VEE  +A++  
Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162

Query: 284 NGYTFQGRPLRV 319
           N   F GR L V
Sbjct: 163 NSQEFYGRVLNV 174



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>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1)
          Length = 371

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FEQ G++    V+ D  T RSRGFGFVT  +VEEV AA+
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 71



 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/60 (38%), Positives = 34/60 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FEQ G +E++E++ DR +G+ RGF FVT    + V   V Q
Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 164



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>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (Unwinding protein 1)
           (UP1) (Fragment)
          Length = 195

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FEQ G++    V+ D  T RSRGFGFVT  +VEEV AA+
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 71



 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/60 (38%), Positives = 34/60 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FEQ G +E++E++ DR +G+ RGF FVT    + V   V Q
Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 164



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>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand RNA-binding
           protein) (hnRNP core protein A1) (HDP)
          Length = 319

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FEQ G++    V+ D  T RSRGFGFVT  +VEEV AA+
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 71



 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/60 (38%), Positives = 34/60 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FEQ G +E++E++ DR +G+ RGF FVT    + V   V Q
Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 164



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>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1) (HDP-1)
           (Topoisomerase-inhibitor suppressed)
          Length = 319

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 28/58 (48%), Positives = 35/58 (60%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FEQ G++    V+ D  T RSRGFGFVT  +VEEV AA+
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 71



 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/60 (38%), Positives = 34/60 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FEQ G +E++E++ DR +G+ RGF FVT    + V   V Q
Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 164



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>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15|
          Length = 296

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 23/71 (32%), Positives = 40/71 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++G++P+     Q+  L    G V  +++++D  TGRS+G+ F+    +E  A+AV   
Sbjct: 20  VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79

Query: 284 NGYTFQGRPLR 316
           NGY    R L+
Sbjct: 80  NGYQLGSRFLK 90



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>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated|
           protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor
           SF3b 49 kDa subunit)
          Length = 424

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 29/73 (39%), Positives = 40/73 (54%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V+VG L   V    L  LF QAG V    +  DR+TG+ +G+GFV   S E+   A++  
Sbjct: 15  VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74

Query: 284 NGYTFQGRPLRVN 322
           N     G+P+RVN
Sbjct: 75  NMIKLYGKPIRVN 87



 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSV-EMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +F+GNL   +D   L   F   G + +  +++ D  TG S+G+ F+   S +   AA+E 
Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query: 281 FNGYTFQGRPLRVN 322
            NG     RP+ V+
Sbjct: 162 MNGQYLCNRPITVS 175



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>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 282

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 25/59 (42%), Positives = 36/59 (61%)
 Frame = +2

Query: 146 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 322
           L  +F + G +  V VVYD+ TGRSRGF FV    +++   A+E+ NG    GR +RV+
Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 193



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>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)|
           binding protein) (ePABP)
          Length = 629

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 29/72 (40%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    +D  +L  +F   G+   V+V+ D  TGRSRGFGFV  G+ EE   AV + 
Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEM 251

Query: 284 NGYTFQGRPLRV 319
           NG    GR + V
Sbjct: 252 NGKEVNGRMIYV 263



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 38/74 (51%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   G++   +V+ +   G S+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVSTKPLYV 365



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 21/72 (29%), Positives = 35/72 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L   V  A L   F  AG +  + V  D  T RS G+ ++      +   A++  
Sbjct: 13  LYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72

Query: 284 NGYTFQGRPLRV 319
           N    +GRP+R+
Sbjct: 73  NFEVIKGRPIRI 84



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VF+ NL  ++D+  L   F   G++   +VV D     SRG+GFV   + E    A++  
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 758

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 29/74 (39%), Positives = 43/74 (58%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           L +FVG LP +  S QL  LF Q G V+   VV ++ +   RGFG+VT   +E+V  A++
Sbjct: 3   LTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62

Query: 278 QFNGYTFQGRPLRV 319
           +    TF+G  + V
Sbjct: 63  EIT--TFEGCKINV 74



 Score = 35.8 bits (81), Expect = 0.027
 Identities = 22/74 (29%), Positives = 37/74 (50%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++ + NL F      L  +F Q G+V  V +   +  G+ RGFGFV   ++ E   A++ 
Sbjct: 114 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALKG 172

Query: 281 FNGYTFQGRPLRVN 322
            N    +GR + V+
Sbjct: 173 MNMKEIKGRTVAVD 186



 Score = 33.9 bits (76), Expect = 0.10
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEE------VA 265
           VF+ NL F  +  +L  L +Q G ++ V +V    T  S+G  F    + E        A
Sbjct: 336 VFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAA 395

Query: 266 AAVEQFNGYTFQGRPLRVN 322
           +   +  G    GR L+V+
Sbjct: 396 SPENEAGGLKLDGRQLKVD 414



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>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660|
           (Poly(A)-binding protein At2g36660) (PABP)
          Length = 609

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 26/72 (36%), Positives = 41/72 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V N+   V   +L   F Q G++   +++ D   G+S+GFGFV   + EE   AV+ F
Sbjct: 306 IYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEK-GKSKGFGFVCFSTPEEAIDAVKTF 364

Query: 284 NGYTFQGRPLRV 319
           +G  F G+PL V
Sbjct: 365 HGQMFHGKPLYV 376



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 22/61 (36%), Positives = 35/61 (57%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV NLP +V +A L  +F++ G++   +V      G+SRG+GFV     +   AA++  
Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTL 172

Query: 284 N 286
           N
Sbjct: 173 N 173



 Score = 34.3 bits (77), Expect = 0.079
 Identities = 20/72 (27%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L  +V    L   F +  S+  V +  D  +GRS  +G+    S ++   A+E+ 
Sbjct: 26  LYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKK 85

Query: 284 NGYTFQGRPLRV 319
           N     G+ +RV
Sbjct: 86  NNSLLNGKMIRV 97



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>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)|
          Length = 281

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 25/59 (42%), Positives = 36/59 (61%)
 Frame = +2

Query: 146 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 322
           L  +F + G +  V VVYD+ TGRSRGF FV    +++   A+E+ NG    GR +RV+
Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 191



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>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 296

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE-- 277
           VFVG +   +D  ++ G F + GSV+ V+++ DR TG S+G+GFV+  +  +V   VE  
Sbjct: 42  VFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVESQ 100

Query: 278 -QFNG----------------YTFQGRPLRVNSGPPP 337
             F+G                Y  Q RPL  N  PPP
Sbjct: 101 INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPP 137



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>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1|
          Length = 632

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQA-GSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +FVG+L  T + + L   F     S    +++ D +TG SR +GFV   S +E   A+  
Sbjct: 184 IFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMH 243

Query: 281 FNGYTFQGRPLRVNSGPPPPR 343
             GY  QGRPLR++   P  R
Sbjct: 244 MQGYLCQGRPLRISVASPKSR 264



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>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L    +   L  +F + G +  + ++ DR T +SRGF FVT  S  +       
Sbjct: 9   KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68

Query: 281 FNGYTFQGRPLRVNS-----------GPPPP 340
            NG +  G+ ++V             GPPPP
Sbjct: 69  MNGKSLDGKAIKVEQATKPSFESGRRGPPPP 99



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>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)|
          Length = 386

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVG+L   + +  +   F   G +    VV D  TG+S+G+GFV+  +  +   A++Q 
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query: 284 NGYTFQGRPLRVN---SGPPPPR 343
            G    GR +R N     PP P+
Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPK 190



 Score = 36.2 bits (82), Expect = 0.021
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VGNL   V  A +  LF Q G  +  +++ D  T  +  + FV        AAA+   
Sbjct: 9   LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66

Query: 284 NGYTFQGRPLRVNSGPPP 337
           NG    G+ ++VN    P
Sbjct: 67  NGRKIMGKEVKVNWATTP 84



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>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)|
           (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15
           (p15-TIA-1)]
          Length = 386

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVG+L   + +  +   F   G +    VV D  TG+S+G+GFV+  +  +   A++Q 
Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167

Query: 284 NGYTFQGRPLRVN---SGPPPPR 343
            G    GR +R N     PP P+
Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPK 190



 Score = 36.2 bits (82), Expect = 0.021
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VGNL   V  A +  LF Q G  +  +++ D  T  +  + FV        AAA+   
Sbjct: 9   LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66

Query: 284 NGYTFQGRPLRVNSGPPP 337
           NG    G+ ++VN    P
Sbjct: 67  NGRKIMGKEVKVNWATTP 84



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>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 960

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/73 (34%), Positives = 37/73 (50%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FV NLP+T     L  LF + G +  +    D +T + +GF F+T    E    A  +
Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462

Query: 281 FNGYTFQGRPLRV 319
            +G  FQGR L V
Sbjct: 463 VDGQVFQGRMLHV 475



 Score = 33.5 bits (75), Expect = 0.13
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRM-TGRSRGFGFV 238
           K+ V N+PF   S ++  LF   G ++ V +      TG  RGFGFV
Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFV 879



 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++ V NLP  +   +   LF   G++    + + +  G+ R FGF+   S EE   A + 
Sbjct: 3   RLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTK-DGKFRKFGFIGFKSEEEAQKAQKH 61

Query: 281 FN 286
           FN
Sbjct: 62  FN 63



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>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1|
           (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 319

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FEQ G++    V+ D  T RSRGFGFVT  +VE+V AA+
Sbjct: 14  KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAM 71



 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FEQ G +E++E++ DR +G+ RGF FVT      V   V Q
Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQ 164



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>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)|
          Length = 749

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 28/69 (40%), Positives = 41/69 (59%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           L +FVG LP +  S QL  LF Q G V+   VV ++ +   RGFG+VT   +E+V  A++
Sbjct: 3   LTLFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62

Query: 278 QFNGYTFQG 304
           +    TF+G
Sbjct: 63  EIT--TFEG 69



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFG---FVTMGSVEEVAAAV 274
           VF+ NL F  +   L  + +Q G ++ V VV    T  S+G     F+T  + ++  AA 
Sbjct: 326 VFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAA 385

Query: 275 E---QFNGYTFQGRPLRVN 322
               +  G    GR L+V+
Sbjct: 386 SPEAEGGGLKLDGRQLKVD 404



 Score = 32.0 bits (71), Expect = 0.39
 Identities = 20/74 (27%), Positives = 35/74 (47%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++ + NL F      L  +F   G+V  V +   +  G+ RGF FV   ++ E   A++ 
Sbjct: 114 RLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIP-KKPDGKMRGFAFVQFKNLLEAGKALKG 172

Query: 281 FNGYTFQGRPLRVN 322
            N    +GR + V+
Sbjct: 173 ANMKEIKGRTVAVD 186



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>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X|
           protein 1)
          Length = 415

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/74 (33%), Positives = 42/74 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++ V N+PF      L  +FE+ G V  VE++++     S+GFGFVTM   ++   A ++
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQE 211

Query: 281 FNGYTFQGRPLRVN 322
            +G   +GR + VN
Sbjct: 212 LHGSMIEGRKIEVN 225



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>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic|
           poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B)
          Length = 629

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 28/72 (38%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    +D  +L  +F   G+   V+V+ D  +GRSRGFGFV  G+ EE   AV + 
Sbjct: 193 VYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEM 251

Query: 284 NGYTFQGRPLRV 319
           NG    GR + V
Sbjct: 252 NGKEVNGRMVYV 263



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 38/74 (51%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   G++   +V+ +   G S+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG--GHSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVSTKPLYV 365



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 20/72 (27%), Positives = 35/72 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++G+L   V  A L   F  AG +  + V  D  T RS G+ ++      +   A++  
Sbjct: 13  LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72

Query: 284 NGYTFQGRPLRV 319
           N    +GRP+R+
Sbjct: 73  NFEVIKGRPIRI 84



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 23/72 (31%), Positives = 34/72 (47%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VF+ NL  ++D+  L   F   G +   +VV D     SRG+GFV   + E    A++  
Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic|
           poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A)
          Length = 629

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 28/72 (38%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    +D  +L  +F   G+   V+V+ D  +GRSRGFGFV  G+ EE   AV + 
Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEM 251

Query: 284 NGYTFQGRPLRV 319
           NG    GR + V
Sbjct: 252 NGKEVNGRMIYV 263



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 25/74 (33%), Positives = 38/74 (51%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   G++   +V+ +   G S+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVSTKPLYV 365



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++G+L   V  A L   F  AG +  + V  D  T RS  + ++      +   A++  
Sbjct: 13  LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTM 72

Query: 284 NGYTFQGRPLRV 319
           N    +GRP+R+
Sbjct: 73  NFEVIKGRPIRI 84



 Score = 36.2 bits (82), Expect = 0.021
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VF+ NL  ++D+  L   F   G++   +VV D     SRG+GFV   + E    A++  
Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein|
           4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP)
           (Activated-platelet protein 1) (APP-1)
          Length = 644

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 27/74 (36%), Positives = 40/74 (54%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + +++ NL  T+D  +L   F   GS+   +V+ +   GRS+GFGFV   S EE   AV 
Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVGSKPLYV 365



 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 26/68 (38%), Positives = 36/68 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    VD   L  LF Q G    V+V+ D   G+S+GFGFV+    E+   AVE+ 
Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEM 251

Query: 284 NGYTFQGR 307
           NG    G+
Sbjct: 252 NGKEISGK 259



 Score = 35.8 bits (81), Expect = 0.027
 Identities = 22/72 (30%), Positives = 35/72 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VF+ NL  ++D+  L   F   G++   +VV D     S+G+ FV   + E    A+E+ 
Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1|
          Length = 828

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 27/78 (34%), Positives = 38/78 (48%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+ NL +T        LF Q G +E V +  +  TG+ +GF  V     E   AA E 
Sbjct: 302 RLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEA 361

Query: 281 FNGYTFQGRPLRVNSGPP 334
            +G  FQGR L +  G P
Sbjct: 362 QDGKIFQGRLLHILPGKP 379



 Score = 37.0 bits (84), Expect = 0.012
 Identities = 23/71 (32%), Positives = 31/71 (43%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ + NLPF      +  LF   GS++ V V   +    SRGF F    S +E   A+  
Sbjct: 704 KILIKNLPFEATKKDVQKLFGAFGSLKTVRVP-KKFNSESRGFAFAEYVSAKEAEHAMSA 762

Query: 281 FNGYTFQGRPL 313
             G    GR L
Sbjct: 763 LQGTHLLGRRL 773



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLF------EQAG----SVEMVEVVYDRMTGRSRGFGFVTMGS 250
           ++ V NLP  +D A L   F      + AG     +  V+VV  R  G++R FGFV   S
Sbjct: 3   RLIVKNLPPYLDEAGLKKHFSTVKDPKSAGFAPSDITDVKVVRAR-DGKTRRFGFVGFRS 61

Query: 251 VEEVAAAVEQFN 286
            E   AAV+ F+
Sbjct: 62  DETAEAAVKYFD 73



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>RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-binding motif protein|
           11)
          Length = 281

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 30/72 (41%), Positives = 37/72 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVGNL   V    L  LF QAG +  V +  DR  G+ + FGFV     E V+ A+   
Sbjct: 12  VFVGNLEARVREEILYELFLQAGPLTKVTICKDR-EGKPKSFGFVCFKHPESVSYAIALL 70

Query: 284 NGYTFQGRPLRV 319
           NG    GRP+ V
Sbjct: 71  NGIRLYGRPINV 82



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>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)|
          Length = 429

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 26/79 (32%), Positives = 38/79 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVGNL +      L   F Q G V   +++  R  G  RG G V   + ++V  A+ Q+
Sbjct: 138 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRAIRQY 195

Query: 284 NGYTFQGRPLRVNSGPPPP 340
           +G  F  R + V    PPP
Sbjct: 196 DGAFFMDRKIFVRQDNPPP 214



 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 26/75 (34%), Positives = 44/75 (58%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +V V NLP +V+   L  +F++ G+V   +V  D   G S G G V+   ++++  A+E+
Sbjct: 237 EVIVKNLPASVNWQALKDIFKECGNVAHADVELDG-DGVSTGSGTVSFYDIKDLHRAIEK 295

Query: 281 FNGYTFQGRPLRVNS 325
           +NGY+ +G  L V S
Sbjct: 296 YNGYSIEGNVLDVKS 310



 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++  NLPF+   + L  LFE  G V   E+ YD   G   G   V   +V++    +E+ 
Sbjct: 353 IYCSNLPFSTAKSDLYDLFETIGKVNNAELRYD-SKGAPTGIAVVEYDNVDDADVCIERL 411

Query: 284 NGYTFQGRPLRVN 322
           N Y + G  L ++
Sbjct: 412 NNYNYGGCDLDIS 424



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>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)|
          Length = 142

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 25/59 (42%), Positives = 33/59 (55%)
 Frame = +2

Query: 146 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 322
           L   F   G V   +++ DR T RSRGFGFVT  + E + +A+E  NG    GR + VN
Sbjct: 3   LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVN 61



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>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 341

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FE+ G ++ +E++ DR +G+ RGFGFVT    + V   V Q
Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 160

Query: 281 ----FNGYTFQGR 307
                NG+  + R
Sbjct: 161 KYHTINGHNAEVR 173



 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 25/58 (43%), Positives = 33/58 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   +EQ G +    V+ D  + RSRGFGFVT  S+ EV AA+
Sbjct: 10  KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM 67



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>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /|
           hnRNP B1)
          Length = 353

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FE+ G ++ +E++ DR +G+ RGFGFVT    + V   V Q
Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 172

Query: 281 ----FNGYTFQGR 307
                NG+  + R
Sbjct: 173 KYHTINGHNAEVR 185



 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 25/58 (43%), Positives = 33/58 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   +EQ G +    V+ D  + RSRGFGFVT  S+ EV AA+
Sbjct: 22  KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM 79



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>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 34/58 (58%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FE+ G++    V+ D  T RSRGFGFVT   VEEV AA+
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93



 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FE+ G +E +EV+ DR +G+ RGF FVT    + V   V Q
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186



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>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 379

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 34/58 (58%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FE+ G++    V+ D  T RSRGFGFVT   VEEV AA+
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93



 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FE+ G +E +EV+ DR +G+ RGF FVT    + V   V Q
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186



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>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 295

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE-- 277
           VFVG +   +D  ++   F + GSV+ V+++ DR TG S+G+GFV+  +  +V   VE  
Sbjct: 42  VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVESQ 100

Query: 278 -QFNG----------------YTFQGRPLRVNSGPPP 337
             F+G                Y  Q RPL  N  PPP
Sbjct: 101 INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPP 137



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>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1) (DAZ homolog)
           (SPGY-like-autosomal)
          Length = 295

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE-- 277
           VFVG +   +D  ++   F + GSV+ V+++ DR TG S+G+GFV+  +  +V   VE  
Sbjct: 42  VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVESQ 100

Query: 278 -QFNG----------------YTFQGRPLRVNSGPPP 337
             F+G                Y  Q RPL  N  PPP
Sbjct: 101 INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPP 137



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>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)|
          Length = 378

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 34/58 (58%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FE+ G++    V+ D  T RSRGFGFVT   VEEV AA+
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93



 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FE+ G +E +EV+ DR +G+ RGF FVT    + V   V Q
Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186



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>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2|
           (hnRNP A3(B))
          Length = 385

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 33/58 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FEQ G +    V+ D  T RSRGFGFVT   VEEV A++
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASM 85



 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 23/60 (38%), Positives = 32/60 (53%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FE  G +E +EV+ DR +G+ RGF FVT    + V   V Q
Sbjct: 119 KIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 178



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>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)|
          Length = 591

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 27/72 (37%), Positives = 38/72 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL F V   +L  +F  AG+V+  ++  D+  G+SRG G VT     E   A+  F
Sbjct: 226 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQAISMF 284

Query: 284 NGYTFQGRPLRV 319
           NG     RP+ V
Sbjct: 285 NGQFLFDRPMHV 296



 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           +VF+ N+P+ +    +  L  E+ G V  VE+  D   G+SRG G V     E V  A+E
Sbjct: 92  RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKALE 150

Query: 278 QFNGYTFQGRPLRVNSGP 331
             N Y   GRPL +   P
Sbjct: 151 TMNKYDLSGRPLNIKEDP 168



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 25/73 (34%), Positives = 34/73 (46%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FV NLPF +   +L   F Q G V   E+  +   G+S+G G V   S E    A   
Sbjct: 515 QIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME--NGKSKGCGTVRFESAESAEKACRI 572

Query: 281 FNGYTFQGRPLRV 319
            NG    GR + V
Sbjct: 573 MNGIKISGREIDV 585



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>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)|
          Length = 600

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 27/72 (37%), Positives = 38/72 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL F V   +L  +F  AG+V+  ++  D+  G+SRG G VT     E   A+  F
Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQAISMF 293

Query: 284 NGYTFQGRPLRV 319
           NG     RP+ V
Sbjct: 294 NGQFLFDRPMHV 305



 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           +VF+ N+P+ +    +  L  E+ G V  VE+  D   G+SRG G V     E V  A+E
Sbjct: 101 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKALE 159

Query: 278 QFNGYTFQGRPLRVNSGP 331
             N Y   GRPL +   P
Sbjct: 160 TMNKYDLSGRPLNIKEDP 177



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/73 (34%), Positives = 34/73 (46%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FV NLPF +   +L   F Q G V   E+  +   G+S+G G V   S E    A   
Sbjct: 524 QIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME--NGKSKGCGTVRFDSPESAEKACRI 581

Query: 281 FNGYTFQGRPLRV 319
            NG    GR + V
Sbjct: 582 MNGIKISGREIDV 594



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>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted|
           in azoospermia-like 1)
          Length = 298

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE-- 277
           VFVG +   +D  ++   F + GSV+ V+++ DR TG S+G+GFV+  +  +V   VE  
Sbjct: 42  VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVESQ 100

Query: 278 -QFNG----------------YTFQGRPLRVNSGPPP 337
             F+G                Y  Q RPL  N  PPP
Sbjct: 101 INFHGKKLKLGPAIRKQNLCTYHVQPRPLIFNPPPPP 137



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>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1|
           (hnRNP A3(A))
          Length = 373

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 33/58 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FEQ G +    V+ D  T RSRGFGFVT   VEEV A++
Sbjct: 28  KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASM 85



 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L    E  G +E +EV+ DR +G+ RGF FVT    + V   V Q
Sbjct: 119 KIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 178



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>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)|
          Length = 728

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 27/72 (37%), Positives = 37/72 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV NL + V   +L  +F  AG V   +++ D+  G+SRG G VT     E   A+  F
Sbjct: 204 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGIVTFEQSIEAVQAISMF 262

Query: 284 NGYTFQGRPLRV 319
           NG     RP+ V
Sbjct: 263 NGQLLFDRPMHV 274



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + F+ N+PF V    L  L  E+ G V  VE++ D   G+SRG   V     E +  A E
Sbjct: 70  RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 128

Query: 278 QFNGYTFQGRPLRVNSGP 331
             N ++  GRPL+V   P
Sbjct: 129 VLNKHSLSGRPLKVKEDP 146



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FV NLPF      L   F + G V   ++  +   G+S+G G V   S E    A   
Sbjct: 652 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 709

Query: 281 FNGYTFQGRPLRV 319
            NG    GR + V
Sbjct: 710 MNGMKLSGREIDV 722



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>BOLL_MACFA (Q8WP23) Protein boule-like|
          Length = 283

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 25/77 (32%), Positives = 45/77 (58%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FVG + F  + + L   F Q GSV+ V++V DR  G S+G+GFVT  + E+    +++
Sbjct: 34  RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92

Query: 281 FNGYTFQGRPLRVNSGP 331
                ++ +  ++N GP
Sbjct: 93  AEKLNYKDK--KLNIGP 107



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>BOLL_HUMAN (Q8N9W6) Protein boule-like|
          Length = 283

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 25/77 (32%), Positives = 45/77 (58%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FVG + F  + + L   F Q GSV+ V++V DR  G S+G+GFVT  + E+    +++
Sbjct: 34  RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92

Query: 281 FNGYTFQGRPLRVNSGP 331
                ++ +  ++N GP
Sbjct: 93  AEKLNYKDK--KLNIGP 107



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>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein|
          Length = 348

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSR----GFGFVTMGSVEEVAA 268
           +VFVG L  +   +++  LFE  G+V  V + + R+   +R    G  FVT  + E+V  
Sbjct: 45  RVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDK 104

Query: 269 AVEQFNGYTFQGRPLRVNSGPP 334
           A+E  NG T   R + V    P
Sbjct: 105 AIETLNGKTLDDREIVVQKARP 126



 Score = 32.0 bits (71), Expect = 0.39
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 215 RSRGFGFVTMGSVEEVAAAVEQFNG 289
           R RGFGFV+  + E+ + A+E+ NG
Sbjct: 256 RGRGFGFVSFANAEDQSRAIEEMNG 280



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>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 634

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL  T+D  +L   F   G++   +V+ D   GRS+GFGFV   +  E   AV 
Sbjct: 287 VNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDE-EGRSKGFGFVCFNAASEATCAVT 345

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 346 ELNGRVVGSKPLYV 359



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 21/72 (29%), Positives = 37/72 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+LP  V+ + L   F  AG V  + V  D +T RS G+ +V      +   A++  
Sbjct: 4   LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTM 63

Query: 284 NGYTFQGRPLRV 319
           N    + +P+R+
Sbjct: 64  NFDLVRNKPIRI 75



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 22/62 (35%), Positives = 32/62 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V+V N     D  +L   FE  G +   +V+  +  G+S+GFGFV   + E   AAV+  
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243

Query: 284 NG 289
           NG
Sbjct: 244 NG 245



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 21/77 (27%), Positives = 37/77 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VF+ NL   +D+  +   F   G++   +V  D   G S+G+GFV   + E    ++++ 
Sbjct: 92  VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEK-GNSKGYGFVHFETEEAANTSIDKV 150

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG    G+ + V    P
Sbjct: 151 NGMLLNGKKVYVGKFIP 167



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>NAM8_YEAST (Q00539) Protein NAM8|
          Length = 523

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +FVG+L   V  +QL  LF  +  S    ++V+D++TG S+G+GFV   + +E   A+ +
Sbjct: 165 IFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSE 224

Query: 281 FNGYTFQGRPLRV 319
             G    GR ++V
Sbjct: 225 MQGVFLNGRAIKV 237



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>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 26/77 (33%), Positives = 37/77 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG L   VD   L   F   G +  +++  D  T + RGF FV     E+ AAA++  
Sbjct: 8   LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67

Query: 284 NGYTFQGRPLRVNSGPP 334
           N     GR +RVN   P
Sbjct: 68  NESELFGRTIRVNLAKP 84



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>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 301

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 26/77 (33%), Positives = 37/77 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG L   VD   L   F   G +  +++  D  T + RGF FV     E+ AAA++  
Sbjct: 8   LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67

Query: 284 NGYTFQGRPLRVNSGPP 334
           N     GR +RVN   P
Sbjct: 68  NESELFGRTIRVNLAKP 84



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>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2|
           (hnRNP A2(B))
          Length = 358

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FE+ G +E  E++ D+ +G+ RGFGFVT    + V   V Q
Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQ 160

Query: 281 ----FNGYTFQGR 307
                NG+  + R
Sbjct: 161 KYHTINGHNAEVR 173



 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 27/69 (39%), Positives = 36/69 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L F      L   +EQ G +    V+ D  + RSRGFGFVT   + EV AA+  
Sbjct: 10  KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69

Query: 281 FNGYTFQGR 307
              +T  GR
Sbjct: 70  -RPHTIDGR 77



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>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP|
           A1) (Helix-destabilizing protein) (Single-strand binding
           protein) (hnRNP core protein A1)
          Length = 365

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 23/60 (38%), Positives = 34/60 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FEQ G +E++E++ DR +G+ RGF FVT    + V   V Q
Sbjct: 106 KIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQ 165



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L F      L   FEQ G++    V+ D  + RSRGFGFVT  S +EV AA+
Sbjct: 15  KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAM 72



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>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1|
          Length = 825

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 21/73 (28%), Positives = 39/73 (53%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FV NLP+    + L  +F + G +E + V +D  +  S+GF +V     +    A ++
Sbjct: 302 RLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKE 361

Query: 281 FNGYTFQGRPLRV 319
            +G  FQGR + +
Sbjct: 362 LDGKHFQGRLMHI 374



 Score = 34.3 bits (77), Expect = 0.079
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVV--YDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+ + NLPF      +  LF   G +  V V   +DR    +RGFGF    S  E   A+
Sbjct: 703 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRS---ARGFGFADFVSAREAENAM 759

Query: 275 EQFNGYTFQGRPL 313
           +        GR L
Sbjct: 760 DALKNTHLLGRRL 772



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>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic|
           region
          Length = 781

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 19/73 (26%), Positives = 41/73 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVG +  ++   +L+ LF + G +  ++++YD+  G   G+GF++     + +  +++ 
Sbjct: 197 IFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKEL 256

Query: 284 NGYTFQGRPLRVN 322
           NG T  G  L +N
Sbjct: 257 NGRTVNGSTLFIN 269



 Score = 34.7 bits (78), Expect = 0.060
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 221 RGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 322
           +G+GF+ + + E+  AA+E FNG+ + G  L VN
Sbjct: 381 KGYGFIKLINHEQALAAIETFNGFMWHGNRLVVN 414



 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 200 DRMTGRSRGFGFVTMGSVEEVAAAVEQFNGY 292
           D   G SRG+GFV+  S  + A A+   +GY
Sbjct: 593 DLPVGSSRGYGFVSFESPLDAAKAILNTDGY 623



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>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 24/75 (32%), Positives = 39/75 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NL  T++  +L   F   GS+   +V+ +   G+ +GFG V   S EE   AV++ 
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361

Query: 284 NGYTFQGRPLRVNSG 328
           NG     +PL V  G
Sbjct: 362 NGRVVGSKPLHVTLG 376



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV N+   +D  +L  LF + G  E V+V+ D  +G+S+GFGFV   + E    AV   
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 284 NGYTFQGRPLRV 319
           +G +  G+ L V
Sbjct: 260 HGKSIDGKVLYV 271



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 20/80 (25%), Positives = 32/80 (40%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L   V    L   F  AG +    +  D +T    G+G+V      +   A+   
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 284 NGYTFQGRPLRVNSGPPPPR 343
           N     G+P R+    P  R
Sbjct: 80  NFDLINGKPFRLMWSQPDDR 99



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>THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1)|
           (Transcriptional coactivator Aly/REF) (bZIP-enhancing
           factor BEF)
          Length = 256

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 26/73 (35%), Positives = 39/73 (53%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ V NL F V  A +  LF + G+++   V YDR +GRS G   V      +   A++Q
Sbjct: 106 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQ 164

Query: 281 FNGYTFQGRPLRV 319
           +NG    GRP+ +
Sbjct: 165 YNGVPLDGRPMNI 177



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>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)|
          Length = 729

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 27/72 (37%), Positives = 37/72 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV NL + V   +L  +F  AG V   +++ D+  G+SRG G VT     E   A+  F
Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSIEAVQAISMF 263

Query: 284 NGYTFQGRPLRV 319
           NG     RP+ V
Sbjct: 264 NGQLLFDRPMHV 275



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + F+ N+PF V    L  L  E+ G V  VE++ D   G+SRG   V     E +  A E
Sbjct: 71  RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 129

Query: 278 QFNGYTFQGRPLRVNSGP 331
             N ++  GRPL+V   P
Sbjct: 130 VLNKHSLSGRPLKVKEDP 147



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FV NLPF      L   F + G V   ++  +   G+S+G G V   S E    A   
Sbjct: 653 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 710

Query: 281 FNGYTFQGRPLRV 319
            NG    GR + V
Sbjct: 711 MNGMKLSGREIDV 723



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>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (RA301)
          Length = 288

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 23/59 (38%), Positives = 35/59 (59%)
 Frame = +2

Query: 146 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 322
           L  +F + G +  V +VYD+ + RSRGF FV   +V++   A E+ NG    GR +RV+
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192



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>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog) (Silica-induced gene 41 protein) (SIG-41)
          Length = 288

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 23/59 (38%), Positives = 35/59 (59%)
 Frame = +2

Query: 146 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 322
           L  +F + G +  V +VYD+ + RSRGF FV   +V++   A E+ NG    GR +RV+
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192



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>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10|
           (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein
           homolog)
          Length = 288

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 23/59 (38%), Positives = 35/59 (59%)
 Frame = +2

Query: 146 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 322
           L  +F + G +  V +VYD+ + RSRGF FV   +V++   A E+ NG    GR +RV+
Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192



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>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4|
           protein)
          Length = 689

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 27/72 (37%), Positives = 37/72 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV NL + V   +L  +F  AG V   +++ D+  G+SRG G VT     E   A+  F
Sbjct: 165 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSIEAVQAISMF 223

Query: 284 NGYTFQGRPLRV 319
           NG     RP+ V
Sbjct: 224 NGQLLFDRPMHV 235



 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + F+ N+PF V    L  L  E+ G V  VE++ D   G+SRG   V     E +  A E
Sbjct: 70  RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 128

Query: 278 QFNGYTFQGRPLRVNSGP 331
             N ++  GRPL+V   P
Sbjct: 129 VLNKHSLSGRPLKVKEDP 146



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FV NLPF      L   F + G V   ++  +   G+S+G G V   S E    A   
Sbjct: 613 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 670

Query: 281 FNGYTFQGRPLRV 319
            NG    GR + V
Sbjct: 671 MNGMKLSGREIDV 683



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>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export|
           factor-binding protein 1) (REF1-I) (Ally of AML-1 and
           LEF-1) (Aly/REF)
          Length = 254

 Score = 47.4 bits (111), Expect = 9e-06
 Identities = 26/73 (35%), Positives = 39/73 (53%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ V NL F V  A +  LF + G+++   V YDR +GRS G   V      +   A++Q
Sbjct: 105 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQ 163

Query: 281 FNGYTFQGRPLRV 319
           +NG    GRP+ +
Sbjct: 164 YNGVPLDGRPMNI 176



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>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Liver regeneration-related
           protein LRRG077)
          Length = 533

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 22/64 (34%), Positives = 39/64 (60%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FVG +P  +   +L  LFE+AG +  + ++ D +TG +RG+ FVT  + E    AV+ 
Sbjct: 73  EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 132

Query: 281 FNGY 292
           +N +
Sbjct: 133 YNNH 136



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 21/78 (26%), Positives = 33/78 (42%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL  TV    L   F Q G +E V+ + D        + F+     +    A+E+ 
Sbjct: 250 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 301

Query: 284 NGYTFQGRPLRVNSGPPP 337
           NG   +G  + +    PP
Sbjct: 302 NGKDLEGENIEIVFAKPP 319



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>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/75 (32%), Positives = 39/75 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NL  T++  +L   F   GS+   +V+ +   G+ +GFG V   S EE   AV++ 
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361

Query: 284 NGYTFQGRPLRVNSG 328
           NG     +PL V  G
Sbjct: 362 NGRIVGSKPLHVTLG 376



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV N+   +D  +L  LF + G  E V+V+ D  +G+S+GFGFV   + E    AV   
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 284 NGYTFQGRPLRV 319
           +G +  G+ L V
Sbjct: 260 HGKSIDGKVLYV 271



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 20/80 (25%), Positives = 32/80 (40%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L   V    L   F  AG +    +  D +T    G+G+V      +   A+   
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 284 NGYTFQGRPLRVNSGPPPPR 343
           N     G+P R+    P  R
Sbjct: 80  NFDLINGKPFRLMWSQPDDR 99



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>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/75 (32%), Positives = 39/75 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NL  T++  +L   F   GS+   +V+ +   G+ +GFG V   S EE   AV++ 
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361

Query: 284 NGYTFQGRPLRVNSG 328
           NG     +PL V  G
Sbjct: 362 NGRIVGSKPLHVTLG 376



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV N+   +D  +L  LF + G  E V+V+ D  +G+S+GFGFV   + E    AV   
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 284 NGYTFQGRPLRV 319
           +G +  G+ L V
Sbjct: 260 HGKSIDGKVLYV 271



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 20/80 (25%), Positives = 32/80 (40%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L   V    L   F  AG +    +  D +T    G+G+V      +   A+   
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 284 NGYTFQGRPLRVNSGPPPPR 343
           N     G+P R+    P  R
Sbjct: 80  NFDLINGKPFRLMWSQPDDR 99



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>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/75 (32%), Positives = 39/75 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NL  T++  +L   F   GS+   +V+ +   G+ +GFG V   S EE   AV++ 
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361

Query: 284 NGYTFQGRPLRVNSG 328
           NG     +PL V  G
Sbjct: 362 NGRIVGSKPLHVTLG 376



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV N+   +D  +L  LF + G  E V+V+ D  +G+S+GFGFV   + E    AV   
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 284 NGYTFQGRPLRV 319
           +G +  G+ L V
Sbjct: 260 HGKSIDGKVLYV 271



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 20/80 (25%), Positives = 32/80 (40%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L   V    L   F  AG +    +  D +T    G+G+V      +   A+   
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 284 NGYTFQGRPLRVNSGPPPPR 343
           N     G+P R+    P  R
Sbjct: 80  NFDLINGKPFRLMWSQPDDR 99



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>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/75 (32%), Positives = 39/75 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NL  T++  +L   F   GS+   +V+ +   G+ +GFG V   S EE   AV++ 
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361

Query: 284 NGYTFQGRPLRVNSG 328
           NG     +PL V  G
Sbjct: 362 NGRIVGSKPLHVTLG 376



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV N+   +D  +L  LF + G  E V+V+ D  +G+S+GFGFV   + E    AV   
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 284 NGYTFQGRPLRV 319
           +G +  G+ L V
Sbjct: 260 HGKSIDGKVLYV 271



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 20/80 (25%), Positives = 32/80 (40%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L   V    L   F  AG +    +  D +T    G+G+V      +   A+   
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 284 NGYTFQGRPLRVNSGPPPPR 343
           N     G+P R+    P  R
Sbjct: 80  NFDLINGKPFRLMWSQPDDR 99



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>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 382

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/75 (32%), Positives = 39/75 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NL  T++  +L   F   GS+   +V+ +   G+ +GFG V   S EE   AV++ 
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361

Query: 284 NGYTFQGRPLRVNSG 328
           NG     +PL V  G
Sbjct: 362 NGRIVGSKPLHVTLG 376



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV N+   +D  +L  LF + G  E V+V+ D  +G+S+GFGFV   + E    AV   
Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259

Query: 284 NGYTFQGRPLRV 319
           +G +  G+ L V
Sbjct: 260 HGKSIDGKVLYV 271



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 20/80 (25%), Positives = 32/80 (40%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L   V    L   F  AG +    +  D +T    G+G+V      +   A+   
Sbjct: 20  LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79

Query: 284 NGYTFQGRPLRVNSGPPPPR 343
           N     G+P R+    P  R
Sbjct: 80  NFDLINGKPFRLMWSQPDDR 99



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>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 26/73 (35%), Positives = 38/73 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG L   V  + L  L  QAG V  V +  DR+T   +GFGFV     E+   A++  
Sbjct: 15  IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74

Query: 284 NGYTFQGRPLRVN 322
           N     G+P++VN
Sbjct: 75  NMIKLYGKPIKVN 87



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMV-EVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +FVGNL   VD   L   F   G +  V +++ D  +G S+GF F+   S E    A+E 
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161

Query: 281 FNGYTFQGRPLRVN 322
            NG     R + V+
Sbjct: 162 MNGQFLCNRAITVS 175



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>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 375

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVG+L   + +  +   F   G +    VV D  TG+S+G+GFV+  +  +   A+   
Sbjct: 99  VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158

Query: 284 NGYTFQGRPLRVN---SGPPPPR 343
            G    GR +R N     PP P+
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPK 181



 Score = 31.6 bits (70), Expect = 0.51
 Identities = 20/78 (25%), Positives = 35/78 (44%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VGNL   V    +  LF Q G  +  +++ +  +     + FV      + AAA+   
Sbjct: 11  LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRDAAAALAAM 68

Query: 284 NGYTFQGRPLRVNSGPPP 337
           NG    G+ ++VN    P
Sbjct: 69  NGRKILGKEVKVNWATTP 86



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>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)|
          Length = 392

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFVG+L   + +  +   F   G +    VV D  TG+S+G+GFV+  +  +   A+   
Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query: 284 NGYTFQGRPLRVN---SGPPPPR 343
            G    GR +R N     PP P+
Sbjct: 176 GGQWLGGRQIRTNWATRKPPAPK 198



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 15/93 (16%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGR----SRGFG-----------FV 238
           ++VGNL   V    +  LF Q G  +  +++ ++   R    S GF            FV
Sbjct: 11  LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70

Query: 239 TMGSVEEVAAAVEQFNGYTFQGRPLRVNSGPPP 337
                 + AAA+   NG    G+ ++VN    P
Sbjct: 71  EFYEHRDAAAALAAMNGRKILGKEVKVNWATTP 103



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>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1|
          Length = 841

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+ N+ +         LF Q G++E V +  D  TG+S+GF +V     E+   A   
Sbjct: 311 RLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRS 370

Query: 281 FNGYTFQGRPLRV 319
            +   FQGR L +
Sbjct: 371 LDKQIFQGRLLHI 383



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 23/71 (32%), Positives = 32/71 (45%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ + NLPF      L  LF   G ++ V V   +    +RGF FV    ++E   A+ Q
Sbjct: 718 KIIIKNLPFEATRKDLLELFGAFGQLKSVRVP-KKFDQSARGFAFVEFNLMKEAETAMSQ 776

Query: 281 FNGYTFQGRPL 313
             G    GR L
Sbjct: 777 LEGVHLLGRRL 787



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>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1) (pp68)
          Length = 623

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 22/64 (34%), Positives = 39/64 (60%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FVG +P  +   +L  LFE+AG +  + ++ D +TG +RG+ FVT  + E    AV+ 
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222

Query: 281 FNGY 292
           +N +
Sbjct: 223 YNNH 226



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 21/78 (26%), Positives = 33/78 (42%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL  TV    L   F Q G +E V+ + D        + F+     +    A+E+ 
Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391

Query: 284 NGYTFQGRPLRVNSGPPP 337
           NG   +G  + +    PP
Sbjct: 392 NGKDLEGENIEIVFAKPP 409



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>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)|
           (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic
           RNA-interacting protein) (Glycine-and tyrosine-rich
           RNA-binding protein) (GRY-RBP) (NS1-associated protein
           1)
          Length = 623

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 22/64 (34%), Positives = 39/64 (60%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FVG +P  +   +L  LFE+AG +  + ++ D +TG +RG+ FVT  + E    AV+ 
Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222

Query: 281 FNGY 292
           +N +
Sbjct: 223 YNNH 226



 Score = 32.7 bits (73), Expect = 0.23
 Identities = 21/78 (26%), Positives = 33/78 (42%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL  TV    L   F Q G +E V+ + D        + F+     +    A+E+ 
Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391

Query: 284 NGYTFQGRPLRVNSGPPP 337
           NG   +G  + +    PP
Sbjct: 392 NGKDLEGENIEIVFAKPP 409



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>SXL_DROSU (Q24668) Protein sex-lethal|
          Length = 354

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V NLP T+   QL  +F + GS+    ++ D++TGR RG  FV     EE   A+   
Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274

Query: 284 NGYTFQG--RPLRV 319
           N    +G  +PL V
Sbjct: 275 NNVIPEGGSQPLSV 288



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>SXL_DROME (P19339) Protein sex-lethal|
          Length = 354

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V NLP T+   QL  +F + GS+    ++ D++TGR RG  FV     EE   A+   
Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272

Query: 284 NGYTFQG--RPLRV 319
           N    +G  +PL V
Sbjct: 273 NNVIPEGGSQPLSV 286



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>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)|
          Length = 305

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV-AAAVE 277
           K+FVG L   V    L   F Q G+VE  E++ D+ +G+ RGFGFV   + +    AAV 
Sbjct: 99  KLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVV 158

Query: 278 QFNGYTFQGRPLRVNSGPP 334
           +F  +  QG  + V    P
Sbjct: 159 KF--HPIQGHRVEVKKAVP 175



 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 25/58 (43%), Positives = 33/58 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+F+G L      + L G FE  G++    VV +  T RSR FGFVT  +VEE  AA+
Sbjct: 8   KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAM 65



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>SXL_MEGSC (O01671) Sex-lethal homolog|
          Length = 321

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           + V  LP  +   +L  LF   G +    ++ D  TG S G+GFV  GS  +   A+   
Sbjct: 80  LIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNL 139

Query: 284 NGYTFQGRPLRVNSGPP 334
           NG T + + ++V+   P
Sbjct: 140 NGITVRNKRIKVSFARP 156



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>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1|
           (hnRNP A2(A))
          Length = 346

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 27/69 (39%), Positives = 37/69 (53%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L F      L   +EQ G++    V+ D  + RSRGFGFVT   + EV AA+  
Sbjct: 10  KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69

Query: 281 FNGYTFQGR 307
              +T  GR
Sbjct: 70  -RPHTIDGR 77



 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +    +   L   FE+ G ++ +E++ D+ +G+ RGF FVT    + V   V Q
Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQ 160

Query: 281 ----FNGYTFQGR 307
                NG+  + R
Sbjct: 161 KYHTINGHNAEVR 173



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>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor|
          Length = 212

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 24/74 (32%), Positives = 36/74 (48%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+++G L    D   L   F     V    V+ +++TGRSRG+GFV   S +   +A+  
Sbjct: 32  KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISA 91

Query: 281 FNGYTFQGRPLRVN 322
            NG    G  + VN
Sbjct: 92  MNGQELNGFNISVN 105



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>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1|
          Length = 878

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 22/73 (30%), Positives = 37/73 (50%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+ N+ +T        LF   G +E V +  D  TG+S+GF +V   + +  A A  +
Sbjct: 331 RLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVE 390

Query: 281 FNGYTFQGRPLRV 319
            +   FQGR L +
Sbjct: 391 LDKQIFQGRLLHI 403



 Score = 35.4 bits (80), Expect = 0.035
 Identities = 23/71 (32%), Positives = 32/71 (45%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ V NLPF      +  LF   G ++ V V   +    +RGF FV     +E   A++Q
Sbjct: 753 KIIVKNLPFEATRKDVFELFSSFGQLKSVRVP-KKFDKSARGFAFVEFLLPKEAENAMDQ 811

Query: 281 FNGYTFQGRPL 313
             G    GR L
Sbjct: 812 LQGVHLLGRRL 822



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>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein|
           (Nucleolar protein interacting with the FHA domain of
           pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34)
          Length = 293

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 25/77 (32%), Positives = 36/77 (46%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V+V +LP  +D  Q+   F Q G+V    +   + TG S+G+ FV   S +      E  
Sbjct: 47  VYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETM 106

Query: 284 NGYTFQGRPLRVNSGPP 334
           N Y F  R L  +  PP
Sbjct: 107 NNYLFGERLLECHFMPP 123



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>BOLL_MOUSE (Q924M5) Protein boule-like|
          Length = 281

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 24/77 (31%), Positives = 44/77 (57%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FVG + F  +   L   F Q GSV+ V++V DR  G S+G+GF+T  + E+    +++
Sbjct: 34  RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQE 92

Query: 281 FNGYTFQGRPLRVNSGP 331
                ++ +  ++N GP
Sbjct: 93  AEKLNYKDK--KLNIGP 107



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>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2|
           (Suppressor of CDC2 with RNA-binding motif 3)
          Length = 407

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 25/79 (31%), Positives = 41/79 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NLP ++D  +L G+ +  G V    ++ D  +G SRG GF  M S E+  A +  F
Sbjct: 137 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHF 195

Query: 284 NGYTFQGRPLRVNSGPPPP 340
           N     G+ ++   G P P
Sbjct: 196 N-----GKYIKTPPGVPAP 209



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>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)|
           (Hexaribonucleotide-binding protein 2) (Repressor of
           tamoxifen transcriptional activity)
          Length = 390

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 24/75 (32%), Positives = 41/75 (54%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++ V N+PF      L  +F Q G +  VE++++     S+GFGFVT  +  +   A E+
Sbjct: 122 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 179

Query: 281 FNGYTFQGRPLRVNS 325
            +G   +GR + VN+
Sbjct: 180 LHGTVVEGRKIEVNN 194



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>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 407

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 25/78 (32%), Positives = 38/78 (48%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +P      +L   F++ G V  V ++YD    R RGFGF+T    + V  AV  
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-N 172

Query: 281 FNGYTFQGRPLRVNSGPP 334
            + +   G+ + V    P
Sbjct: 173 MHFHDIMGKKVEVKRAEP 190



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L ++     L   F Q G V    ++ D+ T +SRGFGFV       V   +  
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query: 281 FNGYTFQGRPLRVNSGPPPPR 343
              +T  GR   ++  P  PR
Sbjct: 71  -RPHTLDGR--NIDPKPCTPR 88



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>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2|
          Length = 383

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 22/62 (35%), Positives = 35/62 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NLP ++D  +L G+ +  G V    ++ D  +G SRG GF  M S E+  A +  F
Sbjct: 139 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCEAIITHF 197

Query: 284 NG 289
           NG
Sbjct: 198 NG 199



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>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1)
          Length = 406

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 25/78 (32%), Positives = 38/78 (48%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +P      +L   F++ G V  V ++YD    R RGFGF+T    + V  AV  
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-N 172

Query: 281 FNGYTFQGRPLRVNSGPP 334
            + +   G+ + V    P
Sbjct: 173 MHFHDIMGKKVEVKRAEP 190



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L ++     L   F Q G V    ++ D+ T +SRGFGFV       V   +  
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query: 281 FNGYTFQGRPLRVNSGPPPPR 343
              +T  GR   ++  P  PR
Sbjct: 71  -RPHTLDGR--NIDPKPCTPR 88



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>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1|
          Length = 396

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 24/75 (32%), Positives = 41/75 (54%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++ V N+PF      L  +F Q G +  VE++++     S+GFGFVT  +  +   A E+
Sbjct: 117 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 174

Query: 281 FNGYTFQGRPLRVNS 325
            +G   +GR + VN+
Sbjct: 175 LHGTVVEGRKIEVNN 189



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>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1|
          Length = 397

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 24/75 (32%), Positives = 41/75 (54%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++ V N+PF      L  +F Q G +  VE++++     S+GFGFVT  +  +   A E+
Sbjct: 118 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 175

Query: 281 FNGYTFQGRPLRVNS 325
            +G   +GR + VN+
Sbjct: 176 LHGTVVEGRKIEVNN 190



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>SAP49_SCHPO (O14102) Spliceosome-associated protein 49|
          Length = 335

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 26/73 (35%), Positives = 35/73 (47%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVGNL   VD   L   F   G +     V     GRS+G+GFV+  S E   AA+E  
Sbjct: 101 LFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAM 160

Query: 284 NGYTFQGRPLRVN 322
           N      +P+ V+
Sbjct: 161 NNQFLMNKPITVS 173



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 24/73 (32%), Positives = 36/73 (49%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++GNL   V  + L  L  QAG V  + +  DR+     GFGF      ++V  A +  
Sbjct: 13  IYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQIL 72

Query: 284 NGYTFQGRPLRVN 322
           N     G+P+RVN
Sbjct: 73  NQVKLFGKPIRVN 85



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>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein|
           19)
          Length = 952

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 25/73 (34%), Positives = 35/73 (47%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FV NL +T     L  LF   G +  +    D +T + +GF FVT    E    A  +
Sbjct: 401 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 460

Query: 281 FNGYTFQGRPLRV 319
            +G  FQGR L V
Sbjct: 461 VDGQVFQGRMLHV 473



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGR---SRGFGFVTMGSVEEVAAAV 274
           +F+ NL F+     L G+F + G+++   +   +       S GFGFV     E+   A+
Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKAL 783

Query: 275 EQFNGYTFQGRPLRV 319
           +Q  G+T  G  L V
Sbjct: 784 KQLQGHTVDGHKLEV 798



 Score = 32.7 bits (73), Expect = 0.23
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRM-TGRSRGFGFV 238
           K+ V N+PF  +  ++  LF   G ++ V +      TG  RGFGFV
Sbjct: 825 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFV 871



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>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein|
           1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B)
           (PABP 1-B) (xPABP1-B)
          Length = 633

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 27/74 (36%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   GS+   +V+ +   GRS+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVATKPLYV 365



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 25/72 (34%), Positives = 38/72 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    +D  +L   F Q G+   V+V+ D   G+SRGFGFV+    E+   AV+  
Sbjct: 193 VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDM 251

Query: 284 NGYTFQGRPLRV 319
           NG    G+ + V
Sbjct: 252 NGKDLNGKAIFV 263



 Score = 37.0 bits (84), Expect = 0.012
 Identities = 21/72 (29%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL  ++D+  L   F   G++   +VV D     S+G+GFV   + E    A+++ 
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)|
           (CeSF2/ASF)
          Length = 258

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 25/73 (34%), Positives = 38/73 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           KV+VGNLP  V   ++  +F + G ++ V++     +GR   F FV      +   AV  
Sbjct: 10  KVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAEDAVRA 65

Query: 281 FNGYTFQGRPLRV 319
            +GY F GR +RV
Sbjct: 66  RDGYEFDGRRIRV 78



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>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3|
          Length = 388

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 26/75 (34%), Positives = 40/75 (53%)
 Frame = +2

Query: 110 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           VGNL F +    L   F +   V  + +V D +T RSRGFG+V   + + ++AA+   +G
Sbjct: 98  VGNLSFDLTENDLGDFFGEG--VTSIRLVIDPLTERSRGFGYVEFETADTLSAAL-ALSG 154

Query: 290 YTFQGRPLRVNSGPP 334
               GRP+R+    P
Sbjct: 155 EDLMGRPVRITVAEP 169



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>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member|
           A1 (RNA-binding motif protein 1)
          Length = 496

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 23/79 (29%), Positives = 40/79 (50%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L    +   L  +F + G +  V ++ DR T +SRGF F+T  +  +   A + 
Sbjct: 9   KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKD 67

Query: 281 FNGYTFQGRPLRVNSGPPP 337
            NG +  G+ ++V     P
Sbjct: 68  MNGKSLHGKAIKVEQAKKP 86



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>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3) (Testis-specific poly(A)-binding protein)
          Length = 631

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   G++   +V+ +   GRS+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVATKPLYV 365



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    +D  +L  LF + G    V+V+ D  +G+S+GFGFV+    E+   AV++ 
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251

Query: 284 NGYTFQGRPLRV 319
           NG    G+ + V
Sbjct: 252 NGKELNGKQIYV 263



 Score = 34.3 bits (77), Expect = 0.079
 Identities = 21/72 (29%), Positives = 35/72 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL  ++++  L       G++    VV D     S+G+GFV   + E    A+++ 
Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKM 158

Query: 284 NGYTFQGRPLRV 319
           NG    GR + V
Sbjct: 159 NGMLLNGRKVFV 170



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>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
           (Nucleolar phosphoprotein NOPP34-like protein)
          Length = 269

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 26/77 (33%), Positives = 37/77 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+LP  +   QL   FEQ G V  + V   + TG S+G+GFV     E      E  
Sbjct: 47  LYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETM 106

Query: 284 NGYTFQGRPLRVNSGPP 334
           N Y    R ++ +  PP
Sbjct: 107 NNYLMGERIIKCHVIPP 123



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>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in|
           azoospermia-associated protein 1) (Proline-rich Vg1
           mRNA-binding protein)
          Length = 360

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 25/78 (32%), Positives = 37/78 (47%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +P      +L   F + G V  V ++YD    R RGFGF+T    + V  AV  
Sbjct: 115 KIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-N 173

Query: 281 FNGYTFQGRPLRVNSGPP 334
            + +   G+ + V    P
Sbjct: 174 MHFHDIMGKKVEVKRAEP 191



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L ++     L   F Q G V    ++ D+ T +SRGFGFV       V   +  
Sbjct: 11  KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70

Query: 281 FNGYTFQGRPLRVNSGPPPPR 343
              +T  GR   ++  P  PR
Sbjct: 71  -RPHTLDGR--NIDPKPCTPR 88



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>SXL_MUSDO (O17310) Sex-lethal homolog|
          Length = 324

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V NLP T+   +L  +F + G++    ++ D++TGR RG  FV     EE   A+   
Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISAL 249

Query: 284 NGYTFQG--RPLRV 319
           N    +G  +PL V
Sbjct: 250 NNVIPEGASQPLTV 263



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>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (Poly(A)-binding protein II) (PABII)
          Length = 166

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 24/72 (33%), Positives = 37/72 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V+VGN+ ++V   +L   F   GSV  V ++ D+ TG  +GF ++       V  A+   
Sbjct: 57  VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNAL-LL 115

Query: 284 NGYTFQGRPLRV 319
           NG     RPL+V
Sbjct: 116 NGSMLHERPLKV 127



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>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)|
           (PABP)
          Length = 653

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 25/74 (33%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + +F+ NL   VD  +L   F   G++   +++ D   G+S+GFGFV   + EE   AV 
Sbjct: 364 VNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQ-GKSKGFGFVCYTTPEEANKAVT 422

Query: 278 QFNGYTFQGRPLRV 319
           + N     G+PL V
Sbjct: 423 EMNQRMLAGKPLYV 436



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VF+ NL   +D+  L   F   G +   +V  D + G ++G+GFV   SVE   AA+E  
Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDEL-GNAKGYGFVHFDSVESANAAIEHV 228

Query: 284 NGYTFQGRPLRV 319
           NG     + + V
Sbjct: 229 NGMLLNDKKVYV 240



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 22/72 (30%), Positives = 38/72 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ NL   +   + + LF Q G +  + +V D+   + RGFGFV   + E    AV++ 
Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVDEL 321

Query: 284 NGYTFQGRPLRV 319
           N   ++G+ L V
Sbjct: 322 NDKEYKGKKLYV 333



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>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein|
           3) (PABP 3)
          Length = 660

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL  ++D+  L   F   G++   +V  D +TGRS+G+GFV     E   AA+++ 
Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKL 196

Query: 284 NG 289
           NG
Sbjct: 197 NG 198



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NL  +VD  +L  +F + G+V   +V+ +   G SRGFGFV   + EE   A+ + 
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEM 392

Query: 284 NGYTFQGRPLRV 319
           NG     +PL +
Sbjct: 393 NGKMIGRKPLYI 404



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 24/62 (38%), Positives = 34/62 (54%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V+V NLP  +   +L   F + G +    V+ D+ +G SR FGFV     E  A+AVE+ 
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEKM 289

Query: 284 NG 289
           NG
Sbjct: 290 NG 291



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>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   G++   +V+ +   GRS+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVATKPLYV 365



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    +D  +L  LF + G    V+V+ D  +G+S+GFGFV+    E+   AV++ 
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251

Query: 284 NGYTFQGRPLRV 319
           NG    G+ + V
Sbjct: 252 NGKELNGKQIYV 263



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL  ++D+  L   F   G++   +VV D     S+G+GFV   + E    A+E+ 
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   G++   +V+ +   GRS+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVATKPLYV 365



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    +D  +L  LF + G    V+V+ D  +G+S+GFGFV+    E+   AV++ 
Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251

Query: 284 NGYTFQGRPLRV 319
           NG    G+ + V
Sbjct: 252 NGKELNGKQIYV 263



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL  ++D+  L   F   G++   +VV D     S+G+GFV   + E    A+E+ 
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   G++   +V+ +   GRS+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVATKPLYV 365



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    +D  +L  LF + G    V+V+ D  +G+S+GFGFV+    E+   AV++ 
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251

Query: 284 NGYTFQGRPLRV 319
           NG    G+ + V
Sbjct: 252 NGKELNGKQIYV 263



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL  ++D+  L   F   G++   +VV D     S+G+GFV   + E    A+E+ 
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein|
           1) (PABP 1)
          Length = 636

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   G++   +V+ +   GRS+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVATKPLYV 365



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    +D  +L  LF + G    V+V+ D  +G+S+GFGFV+    E+   AV++ 
Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251

Query: 284 NGYTFQGRPLRV 319
           NG    G+ + V
Sbjct: 252 NGKELNGKQIYV 263



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL  ++D+  L   F   G++   +VV D     S+G+GFV   + E    A+E+ 
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1|
          Length = 346

 Score = 45.1 bits (105), Expect = 4e-05
 Identities = 24/60 (40%), Positives = 32/60 (53%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L        +   + Q G +  + V+ D  T RSRGFGFVT     EV AA++Q
Sbjct: 24  KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83



 Score = 33.9 bits (76), Expect = 0.10
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +2

Query: 146 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           L   F + G+V   E++ D+ T + RGFGFVT    + V   V Q
Sbjct: 130 LTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174



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>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic|
           region
          Length = 220

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V  LP      +L+  F Q G ++ V +  ++ TG SR +GF+   + E+   A E  
Sbjct: 93  IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESM 152

Query: 284 NGYTFQGRPLRVNSGP 331
           N Y   G  L+V   P
Sbjct: 153 NNYLLMGHLLQVRVLP 168



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>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3|
          Length = 486

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 274
           VFVG +   +D  ++   F + GSV+ V+++ +R TG S+G+GFV+  +   V+++  + 
Sbjct: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 100

Query: 275 EQFNGYTF----------------QGRPLRVNSGPPP 337
             F+G                   Q RPL VN  PPP
Sbjct: 101 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPP 137



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>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           K+FVG L        +   FEQ G V+   +++D+ T R RGFGFVT  S + V    E
Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 241
           K+F+G L +      L   F Q G V+   V+ D +T RSRGFGFVT
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67



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>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           K+FVG L        +   FEQ G V+   +++D+ T R RGFGFVT  S + V    E
Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 241
           K+F+G L +      L   F Q G V+   V+ D +T RSRGFGFVT
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67



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>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)|
          Length = 362

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           K+FVG L        +   FEQ G V+   +++D+ T R RGFGFVT  S + V    E
Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 241
           K+F+G L +      L   F Q G V+   V+ D +T RSRGFGFVT
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67



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>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1|
          Length = 819

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 21/73 (28%), Positives = 35/73 (47%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FV NL +    ++L  +F   G +E + V +D     S+GF +V     +    A   
Sbjct: 296 RLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRN 355

Query: 281 FNGYTFQGRPLRV 319
            +G  FQGR L +
Sbjct: 356 LDGKIFQGRLLHI 368



 Score = 34.3 bits (77), Expect = 0.079
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVV--YDRMTGRSRGFGFVTMGSVEEVAAAV 274
           K+ + NLPF      +  LF   G +  V V   +DR    +RGFGF    S  E   A+
Sbjct: 698 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRS---ARGFGFADFVSAREAENAM 754

Query: 275 EQFNGYTFQGRPL 313
           +        GR L
Sbjct: 755 DALKNTHLLGRRL 767



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>LARK_DROME (Q94901) RNA-binding protein lark|
          Length = 352

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 24/73 (32%), Positives = 41/73 (56%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVGNL     + ++  LF++ G+V   ++V        R +GFV +  V +V  A+++
Sbjct: 87  KIFVGNLTDKTRAPEVRELFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAIKE 138

Query: 281 FNGYTFQGRPLRV 319
            NG    G+PL+V
Sbjct: 139 LNGRVVDGQPLKV 151



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 23/75 (30%), Positives = 40/75 (53%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+GNL     + +L  LFE+ G+V   +VV        + +GFV M + ++   A++ 
Sbjct: 8   KLFIGNLDEKTQATELRALFEKYGTVVECDVV--------KNYGFVHMETEQQGRDAIQN 59

Query: 281 FNGYTFQGRPLRVNS 325
            NGYT     ++V +
Sbjct: 60  LNGYTLNEFAIKVEA 74



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>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2|
          Length = 558

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 274
           VFVG +   +D  ++   F + GSV+ V+++ +R TG S+G+GFV+  +   V+++  + 
Sbjct: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 100

Query: 275 EQFNGYTF----------------QGRPLRVNSGPPP 337
             F+G                   Q RPL VN  PPP
Sbjct: 101 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPP 137



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>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1|
          Length = 744

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 274
           VFVG +   +D  ++   F + GSV+ V+++ +R TG S+G+GFV+  +   V+++  + 
Sbjct: 372 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 430

Query: 275 EQFNGYTF----------------QGRPLRVNSGPPP 337
             F+G                   Q RPL VN  PPP
Sbjct: 431 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPP 467



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 274
           VFVG +   +D  ++   F + GSV+ V+++ +R TG S+G+GFV+  +   V+++  + 
Sbjct: 207 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 265

Query: 275 EQFNGYTF----------------QGRPLRVNSGPPP 337
             F+G                   Q RPL VN  PPP
Sbjct: 266 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPP 302



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 274
           VFVG +   +D  ++   F + GSV+ V+++ +R TG S+G+GFV+  +   V+++  + 
Sbjct: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 100

Query: 275 EQFNGYTF----------------QGRPLRVNSGPPP 337
             F+G                   Q RPL VN  PPP
Sbjct: 101 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPP 137



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>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4|
          Length = 579

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 274
           VFVG +   +D  ++   F + GSV+ V+++ +R TG S+G+GFV+  +   V+++  + 
Sbjct: 207 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 265

Query: 275 EQFNGYTF----------------QGRPLRVNSGPPP 337
             F+G                   Q RPL VN  PPP
Sbjct: 266 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPP 302



 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 19/97 (19%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 274
           VFVG +   +D  ++   F + GSV+ V+++ +R TG S+G+GFV+  +   V+++  + 
Sbjct: 42  VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 100

Query: 275 EQFNGYTF----------------QGRPLRVNSGPPP 337
             F+G                   Q RPL VN  PPP
Sbjct: 101 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPP 137



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>SGN1_YEAST (P40561) RNA-binding protein SGN1|
          Length = 250

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 22/73 (30%), Positives = 40/73 (54%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVGN+   V   Q+   F+  G ++ + ++YDR TG  +G+G++   S      A+ Q 
Sbjct: 66  IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKAL-QL 124

Query: 284 NGYTFQGRPLRVN 322
           NG   +G+ + V+
Sbjct: 125 NGGELKGKKIAVS 137



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>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)|
          Length = 348

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V NLP T+   QL  +F + G +    ++ D++TG+ RG  FV     EE   A+   
Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 257

Query: 284 NGYTFQG--RPLRV 319
           N    +G  +PL V
Sbjct: 258 NNVIPEGASQPLTV 271



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>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 221

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
 Frame = +2

Query: 110 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           V NL +      L  +FE+ G V  V +  DR T  SRGF FV      +   A++  +G
Sbjct: 18  VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77

Query: 290 YTFQGRPLRV--------------NSGPPPPR 343
               GR LRV                GPPP R
Sbjct: 78  AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109



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>SXL_CHRRU (O97018) Sex-lethal homolog|
          Length = 307

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V NLP T+   +L  +F + G++    ++ D++TG+ RG  FV     EE   A+   
Sbjct: 173 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 232

Query: 284 NGYTFQG--RPLRV 319
           N    +G  +PL V
Sbjct: 233 NNVIPEGASQPLTV 246



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>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)|
          Length = 289

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 23/58 (39%), Positives = 37/58 (63%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           VFVG +   ++ A++   FEQ G+V+ V+++ DR TG S+G+GFV+     +V   VE
Sbjct: 38  VFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIVE 94



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>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1)
          Length = 403

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NLP ++D  +L  + +  G V    V+ D  +G SRG GF  M S E+  A +  F
Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRVLRDS-SGASRGVGFARMESTEKCEAVIGHF 201

Query: 284 NG 289
           NG
Sbjct: 202 NG 203



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>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 21/64 (32%), Positives = 38/64 (59%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +VFVG +P  +   +L  LFE+AG +  + ++ D ++G++RG+ F+T    E    AV+ 
Sbjct: 166 EVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKL 225

Query: 281 FNGY 292
            + Y
Sbjct: 226 CDSY 229



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/80 (25%), Positives = 33/80 (41%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FV NL  TV    L   F + G +E V+ + D        + FV          A+++ 
Sbjct: 343 LFVRNLATTVTEEILEKSFSEFGKLERVKKLKD--------YAFVHFEDRGAAVKAMDEM 394

Query: 284 NGYTFQGRPLRVNSGPPPPR 343
           NG   +G  + +    PP +
Sbjct: 395 NGKEIEGEEIEIVLAKPPDK 414



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>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
 Frame = +2

Query: 110 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           V NL +      L  +FE+ G V  V +  DR T  SRGF FV      +   A++  +G
Sbjct: 17  VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76

Query: 290 YTFQGRPLRV--------------NSGPPPPR 343
               GR LRV                GPPP R
Sbjct: 77  AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 108



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>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
 Frame = +2

Query: 110 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           V NL +      L  +FE+ G V  V +  DR T  SRGF FV      +   A++  +G
Sbjct: 17  VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76

Query: 290 YTFQGRPLRV--------------NSGPPPPR 343
               GR LRV                GPPP R
Sbjct: 77  AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 108



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>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein) (Putative myelin regulatory factor 1) (MRF-1)
          Length = 220

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
 Frame = +2

Query: 110 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           V NL +      L  +FE+ G V  V +  DR T  SRGF FV      +   A++  +G
Sbjct: 17  VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76

Query: 290 YTFQGRPLRV--------------NSGPPPPR 343
               GR LRV                GPPP R
Sbjct: 77  AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 108



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>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 220

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
 Frame = +2

Query: 110 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           V NL +      L  +FE+ G V  V +  DR T  SRGF FV      +   A++  +G
Sbjct: 17  VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76

Query: 290 YTFQGRPLRV--------------NSGPPPPR 343
               GR LRV                GPPP R
Sbjct: 77  AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 108



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>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein|
           1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A)
           (PABP 1-A) (xPABP1-A)
          Length = 633

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 26/74 (35%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + ++V NL   +D  +L   F   G++   +V+ +   GRS+GFGFV   S EE   AV 
Sbjct: 294 VNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351

Query: 278 QFNGYTFQGRPLRV 319
           + NG     +PL V
Sbjct: 352 EMNGRIVATKPLYV 365



 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L   V  A L   F  AG +  + V  D +T RS G+ +V      +   A++  
Sbjct: 13  LYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72

Query: 284 NGYTFQGRPLRV 319
           N    +GRP+R+
Sbjct: 73  NFDVIKGRPVRI 84



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 22/72 (30%), Positives = 39/72 (54%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V++ N    ++  +L  +F + G    V+V+ D   G+S+GFGFV+    E+   AV++ 
Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDEM 251

Query: 284 NGYTFQGRPLRV 319
           NG    G+ + V
Sbjct: 252 NGKDMNGKSMFV 263



 Score = 37.0 bits (84), Expect = 0.012
 Identities = 21/72 (29%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL  ++D+  L   F   G++   +VV D     S+G+GFV   + E    A+++ 
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKM 158

Query: 284 NGYTFQGRPLRV 319
           NG     R + V
Sbjct: 159 NGMLLNDRKVFV 170



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>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 328

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           K+FVG L        +   FEQ G VE   +++D+ T R RGFGFVT  + + V    E
Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L +      L   F + G +    V+ D  T RSRGFGFVT      V   + Q
Sbjct: 22  KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81



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>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1|
          Length = 838

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 23/73 (31%), Positives = 35/73 (47%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+ N+ +         LF   G +E V V  D  TG+S+GF +V     E  A A  +
Sbjct: 302 RLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIE 361

Query: 281 FNGYTFQGRPLRV 319
            +   FQGR L +
Sbjct: 362 LDKQIFQGRLLHI 374



 Score = 35.0 bits (79), Expect = 0.046
 Identities = 23/71 (32%), Positives = 31/71 (43%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ V NLPF      +  LF   G ++ V V   +    +RGF FV      E   A++Q
Sbjct: 713 KIIVKNLPFEATRKDVFELFSSFGQLKSVRVP-KKFDKSARGFAFVEFLLPSEAENAMDQ 771

Query: 281 FNGYTFQGRPL 313
             G    GR L
Sbjct: 772 LQGVHLLGRRL 782



 Score = 33.9 bits (76), Expect = 0.10
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGS--VEMVEVVYDRMTG---RSRGFGFVTMGSVEEV 262
           + +FV NL F+  SAQLA  F+      V  V+   D        S GFGF+   + E+ 
Sbjct: 612 VSIFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLSMGFGFIEFRTKEQA 671

Query: 263 AAAVEQFNGYTFQGRPLRV 319
            A +   +G    G  +++
Sbjct: 672 GAVIAAMDGAVIDGHKIQL 690



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLF----EQAG-----SVEMVEVVYDRMTGRSRGFGFVTMGSV 253
           +V V  LP  ++ A+L   F    +Q G      +  V++V D+ +G SR F F+   S 
Sbjct: 3   RVIVKGLPIYLEEARLRAHFLKRLQQQGRGSEDQITDVKIVKDK-SGNSRRFAFIGYRSE 61

Query: 254 EEVAAAVEQFNG 289
           ++   A+E FNG
Sbjct: 62  QDAFDAIEYFNG 73



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>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)|
          Length = 346

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 23/59 (38%), Positives = 31/59 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           K+FVG L        +   FEQ G VE   +++D+ T R RGFGFVT  + + V    E
Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L +      L   F + G +    V+ D  T RSRGFGFVT      V   + Q
Sbjct: 22  KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81



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>RSD1_SCHPO (O13845) RNA-binding protein rsd1|
          Length = 604

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 23/76 (30%), Positives = 39/76 (51%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++ V N+ F +    +  +FE  G +E V +  D    RS+GFG++   +      A+E+
Sbjct: 341 RLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQN-RSKGFGYIQYRNPISARNALEK 399

Query: 281 FNGYTFQGRPLRVNSG 328
            NG+   GR +RV  G
Sbjct: 400 MNGFDLAGRNMRVCLG 415



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 26/72 (36%), Positives = 39/72 (54%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VFV  L   + S +L   FEQAG V   ++V D+++GRS+G  +V     + V AA+   
Sbjct: 242 VFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI-AL 300

Query: 284 NGYTFQGRPLRV 319
           +G    G P+ V
Sbjct: 301 SGKRLLGLPVIV 312



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>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1|
           (Single-stranded DNA-binding protein MSSP-1) (Suppressor
           of CDC2 with RNA-binding motif 2)
          Length = 406

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/62 (33%), Positives = 34/62 (54%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NLP ++D  +L  + +  G V    ++ D  +G SRG GF  M S E+  A +  F
Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHF 201

Query: 284 NG 289
           NG
Sbjct: 202 NG 203



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>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein|
           5) (PABP 5)
          Length = 668

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 25/62 (40%), Positives = 34/62 (54%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V+V NLP  +   +L   F + G +    V+ D+ +G SR FGFV   S E  A AVE+ 
Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEKM 285

Query: 284 NG 289
           NG
Sbjct: 286 NG 287



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 24/72 (33%), Positives = 41/72 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++ NL  +V+  +L  +F + G+V   +V+ +   G SRGFGFV   + EE   A+++ 
Sbjct: 330 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEM 388

Query: 284 NGYTFQGRPLRV 319
           NG     +PL V
Sbjct: 389 NGKMIGRKPLYV 400



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 22/62 (35%), Positives = 35/62 (56%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           VF+ NL  ++D+  L   F   G++   +V  D + GRS+G+GFV     E   AA+++ 
Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKL 192

Query: 284 NG 289
           NG
Sbjct: 193 NG 194



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>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear|
           (Poly(A)-binding protein) (PABP) (ARS consensus-binding
           protein ACBP-67) (Polyadenylate tail-binding protein)
          Length = 576

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 24/72 (33%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG+L  +V  A L  +F   GSV  + V  D +T  S G+ +V     E    A+EQ 
Sbjct: 39  LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQL 98

Query: 284 NGYTFQGRPLRV 319
           N    +GR  R+
Sbjct: 99  NYTPIKGRLCRI 110



 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 25/74 (33%), Positives = 39/74 (52%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           + +FV NL  +VD  +L   F   G++   +V+     G+S+GFGFV   + EE   A+ 
Sbjct: 321 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTE-NGKSKGFGFVCFSTPEEATKAIT 379

Query: 278 QFNGYTFQGRPLRV 319
           + N     G+PL V
Sbjct: 380 EKNQQIVAGKPLYV 393



 Score = 35.8 bits (81), Expect = 0.027
 Identities = 20/72 (27%), Positives = 33/72 (45%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NL   +D+  L   F   G +   ++  D   G+S+GFGFV          A++  
Sbjct: 127 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDAL 185

Query: 284 NGYTFQGRPLRV 319
           NG    G+ + V
Sbjct: 186 NGMLLNGQEIYV 197



 Score = 32.3 bits (72), Expect = 0.30
 Identities = 21/72 (29%), Positives = 30/72 (41%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++V N+       Q   LF + G +    +  D   G+ +GFGFV     E+   AVE  
Sbjct: 220 LYVKNINSETTDEQFQELFAKFGPIVSASLEKDA-DGKLKGFGFVNYEKHEDAVKAVEAL 278

Query: 284 NGYTFQGRPLRV 319
           N     G  L V
Sbjct: 279 NDSELNGEKLYV 290



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>REFP2_MOUSE (Q9JJW6) RNA and export factor-binding protein 2|
          Length = 218

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 25/73 (34%), Positives = 38/73 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ V NL F V  A +  LF + G+++   V YDR +GRS G   V      +   A++Q
Sbjct: 76  KLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDR-SGRSLGTADVHFERRADALKAMKQ 134

Query: 281 FNGYTFQGRPLRV 319
           + G    GRP+ +
Sbjct: 135 YKGVPLDGRPMDI 147



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>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase|
           E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33)
          Length = 300

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VG L   V    L   F   G +  +++  D  + R RGF F+     E+ AAA++  
Sbjct: 8   IYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNM 67

Query: 284 NGYTFQGRPLRVNSGPP 334
           N     GR +RVN   P
Sbjct: 68  NDSELCGRTIRVNLAKP 84



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>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)|
           (hnRNP 48) (HRP48.1)
          Length = 421

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTM---GSVEEV 262
           KVF+G LP  V    L   F + G V  V ++YD+   +SRGFGF++     SVE V
Sbjct: 97  KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHV 153



 Score = 38.5 bits (88), Expect = 0.004
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L +      L+  F + G +    V+ +  +GRSRGFGFVT      V   ++ 
Sbjct: 8   KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ- 66

Query: 281 FNG-YTFQGRPL 313
            NG +T  GR +
Sbjct: 67  -NGPHTLDGRTI 77



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>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1|
          Length = 887

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 23/76 (30%), Positives = 36/76 (47%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+ N+ +T        LF   G +E V V  D  TG+S+GF +V     +    A  +
Sbjct: 346 RLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVE 405

Query: 281 FNGYTFQGRPLRVNSG 328
            +   FQGR L +  G
Sbjct: 406 LDKQIFQGRLLHILPG 421



 Score = 35.8 bits (81), Expect = 0.027
 Identities = 23/71 (32%), Positives = 33/71 (46%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ V NLPF      +  LF   G ++ V V   +    +RGF FV     +E   A++Q
Sbjct: 764 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVP-KKFDKSARGFAFVEFLLPKEAENAMDQ 822

Query: 281 FNGYTFQGRPL 313
            +G    GR L
Sbjct: 823 LHGVHLLGRRL 833



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +2

Query: 185 VEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           V+++ DR  G SR FGF+   + E+   AVE FNG
Sbjct: 46  VKILRDR-NGESRRFGFIGYRNEEDAFDAVEYFNG 79



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>NOP12_CANGA (Q6FUS6) Nucleolar protein 12|
          Length = 396

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 22/57 (38%), Positives = 30/57 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           VFVGNL F  D   L   F   GS+E V +V D  T   +GF +V    ++ V+ A+
Sbjct: 230 VFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKGFAYVQFNELQSVSKAL 286



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>YHH5_YEAST (P38760) Hypothetical 75.9 kDa protein in SPO13-ARG4 intergenic|
           region
          Length = 659

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/72 (29%), Positives = 40/72 (55%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+GNL  TV    L  +F++  S E  +V  D +T +S G+G++      +  +A ++F
Sbjct: 113 LFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKEF 172

Query: 284 NGYTFQGRPLRV 319
           N   F G+ +++
Sbjct: 173 NYTVFFGQEVKI 184



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>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog|
          Length = 300

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 15/45 (33%), Positives = 30/45 (66%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFV 238
           +F+G LP+ +D  +L   F + G +E + +V D++T +S+G+ F+
Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFI 153



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>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage|
           factor IB) (CFIB)
          Length = 534

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 26/78 (33%), Positives = 40/78 (51%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG +   V   +    F Q G++   +++ D+ TG+SRGFGFVT  S + V   V Q
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQ 302

Query: 281 FNGYTFQGRPLRVNSGPP 334
                F+ R + +    P
Sbjct: 303 NKFIDFKDRKIEIKRAEP 320



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTM---GSVEEVAAA 271
           K+F+G L +      L   F + G+V  ++++ D  TGRSRGFGF++     SV+EV   
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219

Query: 272 VEQFNG 289
               +G
Sbjct: 220 QHILDG 225



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>PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppressor 4)|
          Length = 611

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 22/72 (30%), Positives = 38/72 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+G+L  TV    L G+F++  S    +V  D +T +S G G++     EE   A+E+ 
Sbjct: 93  LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152

Query: 284 NGYTFQGRPLRV 319
           N     G+ +R+
Sbjct: 153 NYTKVNGKEIRI 164



 Score = 30.8 bits (68), Expect = 0.87
 Identities = 16/72 (22%), Positives = 34/72 (47%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +F+ NLP       +   F + G ++ + +     T     + FVT  +  +   A++++
Sbjct: 305 IFIKNLPTITTRDDILNFFSEVGPIKSIYL--SNATKVKYLWAFVTYKNSSDSEKAIKRY 362

Query: 284 NGYTFQGRPLRV 319
           N + F+G+ L V
Sbjct: 363 NNFYFRGKKLLV 374



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>ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimulating|
           protein)
          Length = 595

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+G LP  +   +L  L E+ G +  + ++ D   G +RG+ FVT  + +E   A++Q
Sbjct: 57  EIFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMD-FNGNNRGYAFVTFSNKQEAKNAIKQ 115

Query: 281 FNGYTFQ-GRPLRV 319
            N Y  + GR L V
Sbjct: 116 LNNYEIRTGRLLGV 129



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFE--QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           ++V NL  +     +   F   + G+VE V+ + D        + FV   + E+   A++
Sbjct: 233 LYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284

Query: 278 QFNGYTFQGRPLRVNSGPP 334
             NG    G P+ V    P
Sbjct: 285 ALNGKVLDGSPIEVTLAKP 303



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>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I|
          Length = 219

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 25/74 (33%), Positives = 41/74 (55%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++FVGNL   V+   L   F +  S+   +VV DR  G++RGFGFV+    ++   A  +
Sbjct: 31  RLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDR-EGKTRGFGFVSFKDSDQFLKAWRE 89

Query: 281 FNGYTFQGRPLRVN 322
            NG     RP++++
Sbjct: 90  KNGKYIGSRPVKLS 103



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>RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 266

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 26/72 (36%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVGNL   V    L  LF QAG V  V++  D+  G+ + F FV       V  A+   
Sbjct: 12  LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYAMNLL 70

Query: 284 NGYTFQGRPLRV 319
           NG    GRP+++
Sbjct: 71  NGIKLYGRPIKI 82



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>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3|
           subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding
           subunit) (eIF3g)
          Length = 256

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 23/70 (32%), Positives = 37/70 (52%)
 Frame = +2

Query: 110 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           V NLP  ++  +L  LF + G V  + +  D++TG  +GF FVT  S ++ A A+ + N 
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239

Query: 290 YTFQGRPLRV 319
                  L+V
Sbjct: 240 IRMYHMVLKV 249



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>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1|
          Length = 861

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+ N+ ++        LF   G ++ V V  D  TG S+GF +V     EE   A  +
Sbjct: 326 RLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIE 385

Query: 281 FNGYTFQGRPLRV 319
            +   FQGR L +
Sbjct: 386 LDKQIFQGRLLHI 398



 Score = 35.8 bits (81), Expect = 0.027
 Identities = 23/71 (32%), Positives = 32/71 (45%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ V NLPF      +  LF   G ++ V V   +    +RGF FV     +E   A++Q
Sbjct: 739 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVP-KKFDKSARGFAFVEFVLPKEAENAMDQ 797

Query: 281 FNGYTFQGRPL 313
             G    GR L
Sbjct: 798 LQGVHLLGRRL 808



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>ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating|
           protein)
          Length = 594

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+G LP  +   +L  L E+ G +  + ++ D   G +RG+ FVT  + +E   A++Q
Sbjct: 57  EIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKQEAKNAIKQ 115

Query: 281 FNGYTFQ-GRPLRV 319
            N Y  + GR L V
Sbjct: 116 LNNYEIRNGRLLGV 129



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFE--QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           ++V NL  +     +   F   + G+VE V+ + D        + FV   + E+   A++
Sbjct: 233 LYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284

Query: 278 QFNGYTFQGRPLRVNSGPP 334
             NG    G P+ V    P
Sbjct: 285 ALNGKVLDGSPIEVTLAKP 303



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>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly|
           U-binding splicing factor) (Protein half pint) (PUF60
           homolog)
          Length = 637

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 21/73 (28%), Positives = 38/73 (52%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +V+VG++ F +    +   F   G ++ + + +D +T + +GF FV     E    A+EQ
Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190

Query: 281 FNGYTFQGRPLRV 319
            NG    GR ++V
Sbjct: 191 MNGALMGGRNIKV 203



 Score = 31.6 bits (70), Expect = 0.51
 Identities = 15/80 (18%), Positives = 35/80 (43%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           +++V ++   +    +  +FE  G +   ++         +G+GF+   + + +  A+  
Sbjct: 228 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAS 287

Query: 281 FNGYTFQGRPLRVNSGPPPP 340
            N +   G+ LRV     PP
Sbjct: 288 MNLFDLGGQLLRVGRSITPP 307



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>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear|
           ribonucleoprotein 40) (HNRNP 40)
          Length = 344

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV 262
           K+FVG L +     +L   F + G +E + V  D  TGRSRGF F+   + E +
Sbjct: 57  KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAI 110



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 22/80 (27%), Positives = 39/80 (48%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L   +   ++   F Q G++  VE+ +D+   + +GF F+T  S E+V   + +
Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDS-EQVVTDLLK 195

Query: 281 FNGYTFQGRPLRVNSGPPPP 340
                  G+ + V    P P
Sbjct: 196 TPKQKIAGKEVDVKRATPKP 215



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>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)|
          Length = 419

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 23/82 (28%), Positives = 37/82 (45%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           +K+FVGNL     + ++  LF Q G +   ++V        + FGFV M S  E   A++
Sbjct: 2   VKIFVGNLSPNTTAEEIRSLFSQYGKISECDIV--------KNFGFVHMDSKSEADEAIQ 53

Query: 278 QFNGYTFQGRPLRVNSGPPPPR 343
             + Y   G  + V      P+
Sbjct: 54  NLHHYMLNGMAMNVEMSKGKPK 75



 Score = 34.7 bits (78), Expect = 0.060
 Identities = 21/73 (28%), Positives = 35/73 (47%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+ VGN+  +  + +L   FE+ G V   ++V D        + FV M  VE+   A+  
Sbjct: 79  KLHVGNISSSCTNQELRAKFEEYGPVVECDIVKD--------YAFVHMERVEDAMEAISG 130

Query: 281 FNGYTFQGRPLRV 319
            +   FQG+ + V
Sbjct: 131 LDNTAFQGKLMSV 143



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>FCA_ARATH (O04425) Flowering time control protein FCA|
          Length = 747

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG+L       ++  +F Q G VE V ++ D    +SRG GFV   S E   AA++ 
Sbjct: 212 KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYR-QSRGCGFVKYSSKETAMAAIDG 270

Query: 281 FNG-YTFQG--RPLRVNSGPP 334
            NG YT +G  +PL V    P
Sbjct: 271 LNGTYTMRGCNQPLIVRFAEP 291



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 19/59 (32%), Positives = 35/59 (59%)
 Frame = +2

Query: 98  LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 274
           +K+FVG++P T    ++   FEQ G+V  V ++ D+ TG+ +G  FV   + ++   A+
Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAI 178



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>RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 262

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 26/72 (36%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVGNL   V    L  LF QAG V  V++  D+  G+ + F FV       V  A+   
Sbjct: 12  LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYAMNLL 70

Query: 284 NGYTFQGRPLRV 319
           NG    GRP+++
Sbjct: 71  NGIKLFGRPIKI 82



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>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like|
          Length = 276

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 21/77 (27%), Positives = 36/77 (46%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +++G++P  +   QL   F Q G+V  + +   + TG S+G+ +V     E      +  
Sbjct: 43  IYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTM 102

Query: 284 NGYTFQGRPLRVNSGPP 334
           N Y F  R L+    PP
Sbjct: 103 NNYLFCERLLKCEFVPP 119



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>RNP24_SCHPO (Q09100) RNA-binding protein rnp24|
          Length = 369

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           +FVGNL F    A L   F Q G +  V ++    TG+ +GFGFV    ++    A+E
Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAME 287



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>RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 265

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 26/72 (36%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           +FVGNL   V    L  LF QAG V  V++  D+  G+ + F FV       V  A+   
Sbjct: 12  LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKLKQFAFVNFKHEVSVPYAMNLL 70

Query: 284 NGYTFQGRPLRV 319
           NG    GRP+++
Sbjct: 71  NGIKLFGRPIKI 82



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>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 21/47 (44%), Positives = 27/47 (57%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 241
           K+F+G L +      L   FEQ G +  V V+ D  T RSRGFGF+T
Sbjct: 18  KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFIT 64



 Score = 37.0 bits (84), Expect = 0.012
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV 262
           K+FVG +   ++   L   F+Q G+V    +V D+ T + RGF FV     + V
Sbjct: 109 KLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPV 162



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>ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimulating|
           protein)
          Length = 594

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+G LP  +   +L  L E+ G +  + ++ D   G +RG+ FVT  +  E   A++Q
Sbjct: 57  EIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKVEAKNAIKQ 115

Query: 281 FNGYTFQ-GRPLRV 319
            N Y  + GR L V
Sbjct: 116 LNNYEIRNGRLLGV 129



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFE--QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           ++V NL  +     +   F   + G+VE V+ + D        + FV   + E+   A++
Sbjct: 233 LYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284

Query: 278 QFNGYTFQGRPLRVNSGPP 334
             NG    G P+ V    P
Sbjct: 285 ALNGKVLDGSPIEVTLAKP 303



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>NCBP2_ASHGO (Q754W7) Nuclear cap-binding protein subunit 2|
          Length = 218

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 22/76 (28%), Positives = 37/76 (48%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VGNL F     QL  LF + GS+E + +  DR      GF F+   + +E  AA++  
Sbjct: 48  IYVGNLSFYTSEEQLYELFSKCGSIEKIIMGLDRFKFTPCGFCFIIYQTPQEALAALKYL 107

Query: 284 NGYTFQGRPLRVNSGP 331
           +      R + ++  P
Sbjct: 108 SKTKLDDREITIDLDP 123



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>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 353

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L +      L   F + G V    +  D +TGRSRGFGFV     E V   ++Q
Sbjct: 96  KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L       ++   F   G VE +E+  D  T + RGF F+T    E V   +E+
Sbjct: 181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 240



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>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L +      L   F + G V    +  D +TGRSRGFGFV     E V   ++Q
Sbjct: 98  KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L       ++   F   G VE +E+  D  T + RGF F+T    E V   +E+
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242



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>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)|
           (AU-rich element RNA-binding protein 1)
          Length = 355

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 22/60 (36%), Positives = 30/60 (50%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+F+G L +      L   F + G V    +  D +TGRSRGFGFV     E V   ++Q
Sbjct: 98  KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L       ++   F   G VE +E+  D  T + RGF F+T    E V   +E+
Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242



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>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1|
          Length = 833

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 20/73 (27%), Positives = 35/73 (47%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+ NL ++     L  LF   G +E V +  D+ T   +GF ++     ++   A  +
Sbjct: 324 RLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLE 383

Query: 281 FNGYTFQGRPLRV 319
            +   FQGR L V
Sbjct: 384 LDAKPFQGRLLHV 396



 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 218 SRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRV 319
           S GFGFV         AA+   NG+   G  L +
Sbjct: 664 SMGFGFVEFKDKASAVAAMHAMNGFVLDGHKLEI 697



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>ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimulating|
           protein)
          Length = 587

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           ++F+G LP  +   +L  L E+ G +  + ++ D   G +RG+ FVT  +  E   A++Q
Sbjct: 57  EIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKLEAKNAIKQ 115

Query: 281 FNGYTFQ-GRPLRV 319
            N Y  + GR L V
Sbjct: 116 LNNYEIRNGRLLGV 129



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFE--QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           ++V NL  +     +   F   + G+VE V+ + D        + FV   + E+   A++
Sbjct: 233 LYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284

Query: 278 QFNGYTFQGRPLRVNSGPP 334
             NG    G P+ V    P
Sbjct: 285 ALNGKVLDGSPIEVTLAKP 303



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>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 19/72 (26%), Positives = 38/72 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VGN+ +   + +L   F   GSV  V ++ D+ +G  +GF ++     E V  ++   
Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 231

Query: 284 NGYTFQGRPLRV 319
           +   F+GR ++V
Sbjct: 232 DESLFRGRQIKV 243



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>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA-binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 305

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 19/72 (26%), Positives = 38/72 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VGN+ +   + +L   F   GSV  V ++ D+ +G  +GF ++     E V  ++   
Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 231

Query: 284 NGYTFQGRPLRV 319
           +   F+GR ++V
Sbjct: 232 DESLFRGRQIKV 243



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>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein|
           2) (PolyA binding protein II) (PABII)
           (Polyadenylate-binding nuclear protein 1) (Nuclear
           poly(A)-binding protein 1)
          Length = 301

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 19/72 (26%), Positives = 38/72 (52%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           ++VGN+ +   + +L   F   GSV  V ++ D+ +G  +GF ++     E V  ++   
Sbjct: 169 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 227

Query: 284 NGYTFQGRPLRV 319
           +   F+GR ++V
Sbjct: 228 DESLFRGRQIKV 239



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>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)|
          Length = 303

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 22/72 (30%), Positives = 36/72 (50%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 283
           V+VGNLP  +   ++  LF + G V  +++   ++  R  G+ FV      +   A+   
Sbjct: 9   VYVGNLPGDIREREVEDLFSKYGPVVQIDL---KVPPRPPGYAFVEFDDARDAEDAIHGR 65

Query: 284 NGYTFQGRPLRV 319
           +GY F G  LRV
Sbjct: 66  DGYDFDGHRLRV 77



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>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma|
           breakpoint region 1 protein)
          Length = 656

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEM--------VEVVYDRMTGRSRGFGFVTMGSVEE 259
           ++V  L  +V    LA  F+Q G V+M        + +  D+ TG+ +G   V+      
Sbjct: 363 IYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 422

Query: 260 VAAAVEQFNGYTFQGRPLRVNSGPPPP 340
             AAVE F+G  FQG  L+V+     P
Sbjct: 423 AKAAVEWFDGKDFQGSKLKVSLARKKP 449



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>RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif protein 14)|
          Length = 669

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/73 (34%), Positives = 36/73 (49%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVGN+     S +L  LFE+ G V   +VV D        + FV M    +  AA+ Q
Sbjct: 80  KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQ 131

Query: 281 FNGYTFQGRPLRV 319
            NG   +G+ + V
Sbjct: 132 LNGKEVKGKRINV 144



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>RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif protein 14)|
          Length = 669

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/73 (34%), Positives = 36/73 (49%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVGN+     S +L  LFE+ G V   +VV D        + FV M    +  AA+ Q
Sbjct: 80  KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQ 131

Query: 281 FNGYTFQGRPLRV 319
            NG   +G+ + V
Sbjct: 132 LNGKEVKGKRINV 144



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>RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif protein 14)|
           (RRM-containing coactivator activator/modulator)
           (Synaptotagmin-interacting protein) (SYT-interacting
           protein)
          Length = 669

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/73 (34%), Positives = 36/73 (49%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVGN+     S +L  LFE+ G V   +VV D        + FV M    +  AA+ Q
Sbjct: 80  KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQ 131

Query: 281 FNGYTFQGRPLRV 319
            NG   +G+ + V
Sbjct: 132 LNGKEVKGKRINV 144



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>RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif protein 14)|
          Length = 669

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 25/73 (34%), Positives = 36/73 (49%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVGN+     S +L  LFE+ G V   +VV D        + FV M    +  AA+ Q
Sbjct: 80  KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQ 131

Query: 281 FNGYTFQGRPLRV 319
            NG   +G+ + V
Sbjct: 132 LNGKEVKGKRINV 144



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>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core|
           protein A1-A) (PEN repeat clone P9)
          Length = 365

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 20/47 (42%), Positives = 28/47 (59%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 241
           K+F+G L +      L   FE+ G++  V V+ D  T RSRGFGF+T
Sbjct: 32  KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 78



 Score = 39.7 bits (91), Expect = 0.002
 Identities = 20/60 (33%), Positives = 30/60 (50%)
 Frame = +2

Query: 101 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
           K+FVG L    D   +   F+  G++  + +V D+ TG+ RGF FV     + V   V Q
Sbjct: 123 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 182



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>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (Eif3p42) (eIF3g)
          Length = 320

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 22/75 (29%), Positives = 35/75 (46%)
 Frame = +2

Query: 110 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           V NL        L  LF   GS+  + +  D+ TG+S+GF F++    E+ A A+   +G
Sbjct: 243 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSG 302

Query: 290 YTFQGRPLRVNSGPP 334
           + +    L V    P
Sbjct: 303 FGYDHLILNVEWAKP 317



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>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4|
           (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit)
           (eIF3 p42) (eIF3g)
          Length = 320

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 22/75 (29%), Positives = 35/75 (46%)
 Frame = +2

Query: 110 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 289
           V NL        L  LF   GS+  + +  D+ TG+S+GF F++    E+ A A+   +G
Sbjct: 243 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSG 302

Query: 290 YTFQGRPLRVNSGPP 334
           + +    L V    P
Sbjct: 303 FGYDHLILNVEWAKP 317



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>EWS_MOUSE (Q61545) RNA-binding protein EWS|
          Length = 655

 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
 Frame = +2

Query: 104 VFVGNLPFTVDSAQLAGLFEQAGSVEM--------VEVVYDRMTGRSRGFGFVTMGSVEE 259
           ++V  L   V    LA  F+Q G V+M        + +  D+ TG+ +G   V+      
Sbjct: 362 IYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 421

Query: 260 VAAAVEQFNGYTFQGRPLRVNSGPPPP 340
             AAVE F+G  FQG  L+V+     P
Sbjct: 422 AKAAVEWFDGKDFQGSKLKVSLARKKP 448



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>SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized by T-cells 3|
            (SART-3) (mSART-3) (Tumor-rejection antigen SART3)
          Length = 962

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 21/81 (25%), Positives = 43/81 (53%)
 Frame = +2

Query: 101  KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
            K+F+  LPF+    +L  + +  G+V+ + +V +R  G+ +G  +V   +  + + AV +
Sbjct: 802  KLFISGLPFSCTKEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMK 860

Query: 281  FNGYTFQGRPLRVNSGPPPPR 343
             +G T +   ++V    PP R
Sbjct: 861  MDGMTIRENVIKVAISNPPQR 881



 Score = 36.6 bits (83), Expect = 0.016
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
 Frame = +2

Query: 104 VFVGNLPFTVD--SAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 277
           VFV NLP++++    +L  LFE  G V  +  ++    G  RG+ +V  G  +    A+E
Sbjct: 706 VFVSNLPYSIEEPEVKLRPLFEVCGEVVQIRPIFSN-RGDFRGYCYVEFGEEKSAQQALE 764

Query: 278 QFNGYTFQGRPLRVN 322
             +    +GRP+ V+
Sbjct: 765 -LDRKIVEGRPMFVS 778



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>SART3_PONPY (Q5REG1) Squamous cell carcinoma antigen recognized by T-cells 3|
            (SART-3)
          Length = 981

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 21/81 (25%), Positives = 43/81 (53%)
 Frame = +2

Query: 101  KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 280
            K+F+  LPF+    +L  + +  G+V+ + +V +R  G+ +G  +V   +  + + AV +
Sbjct: 820  KLFISGLPFSCTKEELEEICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMK 878

Query: 281  FNGYTFQGRPLRVNSGPPPPR 343
             +G T +   ++V    PP R
Sbjct: 879  MDGMTIKENVIKVAISNPPQR 899


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,077,559
Number of Sequences: 219361
Number of extensions: 686660
Number of successful extensions: 3558
Number of sequences better than 10.0: 421
Number of HSP's better than 10.0 without gapping: 3023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3482
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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