ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2g07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108531.1| Zea mays PCO112988 mRNA sequence Length = 792 Score = 258 bits (130), Expect = 9e-66 Identities = 163/174 (93%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| Sbjct: 170 ttcatgtctgatctcgacgtccagcttccatctgcttttgatccgtttgcagaggcaaat 229 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||||||||||| | |||||||||||||||||| |||||||||| |||||| | |||||| Sbjct: 230 gctgaggactccagtgctggtgctggatcaaaggactatgtgcacgtgcgtattcagcag 289 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaaagactacagc 310 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 290 cgcaacggaaggaagagtctgacaactgttcagggcttgaagaaagagtacagc 343
>ref|NM_190883.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 360 Score = 210 bits (106), Expect = 2e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 140 atgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaatgct 199 ||||||||||||||||||||| ||||| | ||||||||||||||||| || || |||||| Sbjct: 1 atgtctgatctcgacgtccagcttccatcagcttttgatccgtttgcggaagccaatgct 60 Query: 200 gaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcagcgc 259 ||||||||| ||| |||||||||||||||| ||||||| || ||||| | ||||||||| Sbjct: 61 gaggactccagcgttggtgctggatcaaaggactatgtacacgtgcgcattcagcagcgc 120 Query: 260 aacggaagaaagagtctgacaactgttcagggcttgaagaaagactacag 309 |||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 121 aacggaagaaagagtctgactactgttcagggcttgaagaaagagtacag 170
>dbj|AK070301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049M22, full insert sequence Length = 1410 Score = 200 bits (101), Expect = 2e-48 Identities = 155/173 (89%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||||| ||| ||||| |||| || ||||||||||||||||||||| Sbjct: 835 ttcatgtctgatctcgacgttcagcttccatctgccttcgatccgtttgctgaggcaaat 894 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||||||||||||||||||| ||||| ||||| | |||||||||||||| |||||||| Sbjct: 895 gctgaggactccggcgctggccctggagcaaaggattatgtgcatgtgcgcatccagcag 954 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaaagactacag 309 |||||||| ||||||||||| || |||||||||||||| ||||| || ||||| Sbjct: 955 cgcaacggcagaaagagtctaactactgttcagggcttaaagaaggagtacag 1007
>ref|XM_475493.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 348 Score = 194 bits (98), Expect = 1e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 140 atgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaatgct 199 ||||||||||||||||| ||| ||||| |||| || |||||||||||||||||||||||| Sbjct: 1 atgtctgatctcgacgttcagcttccatctgccttcgatccgtttgctgaggcaaatgct 60 Query: 200 gaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcagcgc 259 ||||||||||||||||| ||||| ||||| | |||||||||||||| ||||||||||| Sbjct: 61 gaggactccggcgctggccctggagcaaaggattatgtgcatgtgcgcatccagcagcgc 120 Query: 260 aacggaagaaagagtctgacaactgttcagggcttgaagaaagactacag 309 ||||| ||||||||||| || |||||||||||||| ||||| || ||||| Sbjct: 121 aacggcagaaagagtctaactactgttcagggcttaaagaaggagtacag 170
>dbj|AK058219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F05, full insert sequence Length = 731 Score = 192 bits (97), Expect = 5e-46 Identities = 154/173 (89%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||||| ||| ||||| |||| || ||||||||||||||||||||| Sbjct: 156 ttcatgtctgatctcgacgttcagcttccatctgccttcgatccgtttgctgaggcaaat 215 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||||||||||||||||||| ||||| ||||| | |||||||||||| | |||||||| Sbjct: 216 gctgaggactccggcgctggccctggagcaaaggattatgtgcatgtgtgcatccagcag 275 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaaagactacag 309 |||||||| ||||||||||| || |||||||||||||| ||||| || ||||| Sbjct: 276 cgcaacggcagaaagagtctaactactgttcagggcttaaagaaggagtacag 328
>gb|AY104121.1| Zea mays PCO141133 mRNA sequence Length = 815 Score = 188 bits (95), Expect = 7e-45 Identities = 149/167 (89%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||| Sbjct: 163 ttcatgtctgatctcgacgtccagcttccatctgcctttgatccgtttgctgaggcaaat 222 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 ||||||||||| || |||||| ||||| | ||| | |||||||||||||| |||||||| Sbjct: 223 gctgaggactctggtgctggtcctggaacgaaggattatgtgcatgtgcgcatccagcag 282 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaaaga 303 |||||||| |||||||||||||| || || ||||| |||||||||| Sbjct: 283 cgcaacggcagaaagagtctgactacagtccagggtctgaagaaaga 329
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 163 bits (82), Expect = 4e-37 Identities = 121/134 (90%) Strand = Plus / Plus Query: 176 gatccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactat 235 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||| Sbjct: 79741 gatccgtttgctgaggcaaatgctgaggactccggcgctggccctggagcaaaggattat 79800 Query: 236 gtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttg 295 ||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 79801 gtgcatgtgcgcatccagcagcgcaacggcagaaagagtctaactactgttcagggctta 79860 Query: 296 aagaaagactacag 309 ||||| || ||||| Sbjct: 79861 aagaaggagtacag 79874 Score = 46.1 bits (23), Expect = 0.066 Identities = 32/35 (91%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgc 171 |||||||||||||||||||| ||| ||||| |||| Sbjct: 79378 ttcatgtctgatctcgacgttcagcttccatctgc 79412
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 4e-37 Identities = 121/134 (90%) Strand = Plus / Plus Query: 176 gatccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactat 235 ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||| Sbjct: 24393951 gatccgtttgctgaggcaaatgctgaggactccggcgctggccctggagcaaaggattat 24394010 Query: 236 gtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttg 295 ||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||| Sbjct: 24394011 gtgcatgtgcgcatccagcagcgcaacggcagaaagagtctaactactgttcagggctta 24394070 Query: 296 aagaaagactacag 309 ||||| || ||||| Sbjct: 24394071 aagaaggagtacag 24394084 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 192 caaatgctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtcc 251 ||||||||||||||||| | | | ||| || ||||||| ||||||||||||||| | | Sbjct: 19105699 caaatgctgaggactccagtgtttgtgttgcatcaaaggactatgtgcatgtgcccattc 19105640 Query: 252 agcagcgcaacggaagaaagagtctga 278 | |||| |||||||||||||| ||||| Sbjct: 19105639 aacagcacaacggaagaaagaatctga 19105613 Score = 46.1 bits (23), Expect = 0.066 Identities = 32/35 (91%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgc 171 |||||||||||||||||||| ||| ||||| |||| Sbjct: 24393588 ttcatgtctgatctcgacgttcagcttccatctgc 24393622
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 163 bits (82), Expect = 4e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 176 gatccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactat 235 ||||||||||| || || ||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 33645127 gatccgtttgcggaagccaatgctgaggactccagcgttggtgctggatcaaaggactat 33645068 Query: 236 gtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttg 295 || || ||||| | ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 33645067 gtacacgtgcgcattcagcagcgcaacggaagaaagagtctgactactgttcagggcttg 33645008 Query: 296 aagaaagactacag 309 |||||||| ||||| Sbjct: 33645007 aagaaagagtacag 33644994 Score = 56.0 bits (28), Expect = 7e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttg 176 |||||||||||||||||||||||| ||||| | ||||||| Sbjct: 33645475 ttcatgtctgatctcgacgtccagcttccatcagcttttg 33645436
>dbj|AP003290.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C02 Length = 80086 Score = 163 bits (82), Expect = 4e-37 Identities = 121/134 (90%) Strand = Plus / Minus Query: 176 gatccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactat 235 ||||||||||| || || ||||||||||||||| ||| |||||||||||||||| ||||| Sbjct: 59999 gatccgtttgcggaagccaatgctgaggactccagcgttggtgctggatcaaaggactat 59940 Query: 236 gtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttg 295 || || ||||| | ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 59939 gtacacgtgcgcattcagcagcgcaacggaagaaagagtctgactactgttcagggcttg 59880 Query: 296 aagaaagactacag 309 |||||||| ||||| Sbjct: 59879 aagaaagagtacag 59866 Score = 56.0 bits (28), Expect = 7e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttg 176 |||||||||||||||||||||||| ||||| | ||||||| Sbjct: 60347 ttcatgtctgatctcgacgtccagcttccatcagcttttg 60308
>gb|AY365040.1| Zea mays translation initiation factor-like gene, partial sequence Length = 656 Score = 121 bits (61), Expect = 1e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 176 gatccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactat 235 |||||||||||||||||||||||||||| ||| || |||||| ||||| | ||| | ||| Sbjct: 337 gatccgtttgctgaggcaaatgctgagggctctggtgctggtcctggaacgaaggattat 396 Query: 236 gtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttg 295 ||||||||||| |||||||||||||||| |||||||||||||| || || ||||| || Sbjct: 397 gtgcatgtgcgcatccagcagcgcaacggcagaaagagtctgactacagtccagggtctg 456 Query: 296 aagaa 300 ||||| Sbjct: 457 aagaa 461 Score = 40.1 bits (20), Expect = 4.1 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttg 176 ||||||||| |||||||||||||| ||||| |||| |||| Sbjct: 110 ttcatgtct-atctcgacgtccagcttccatctgcctttg 148
>emb|AJ242801.1|SST242801 Sporobolus stapfianus partial mRNA for putative translation initiation factor eIF-1 Length = 796 Score = 103 bits (52), Expect = 3e-19 Identities = 136/164 (82%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||| ||| | ||| | |||||||| || ||||| ||| ||||||| ||| Sbjct: 165 ttcatgtctgatcttgacattcagatcccaactgccttcgatcccttttctgaggccaat 224 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| |||||| || || | ||| ||||||||| |||| || |||||||| |||||||| Sbjct: 225 gctggggactctggtgcggctgcaggatcaaaggactacgttcatgtgcgcatccagcag 284 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||||||||| ||||||||||| |||||||| Sbjct: 285 cgtaatggtcgcaagagtctgacgactgttcagggtttgaagaa 328
>dbj|AB003378.1| Salix bakko mRNA for SUI1 homolog, complete cds Length = 700 Score = 91.7 bits (46), Expect = 1e-15 Identities = 120/145 (82%), Gaps = 6/145 (4%) Strand = Plus / Plus Query: 162 ttccaactgcttttgatccgtttgctgaggcaaatgctgaggactccggcgctggtgctg 221 ||||||||||||| ||||| || |||||||||||||||||||||| ||||||||| Sbjct: 161 ttccaactgctttcgatcccttcgctgaggcaaatgctgaggact------ctggtgctg 214 Query: 222 gatcaaagaactatgtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaa 281 | |||| | ||||| ||||||||||| |||||||| || ||||| || || ||||| | Sbjct: 215 ggacaaaagattatgttcatgtgcgtgtacagcagcgtaatggaaggaaaagcctgacta 274 Query: 282 ctgttcagggcttgaagaaagacta 306 ||||||| || |||||||| ||||| Sbjct: 275 ctgttcaaggattgaagaaggacta 299
>gb|BT013323.1| Lycopersicon esculentum clone 135043R, mRNA sequence Length = 787 Score = 89.7 bits (45), Expect = 5e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 167 ttcatgtctgatctcgacctccaagttcccgctgcttttgatccctttgctgaggcaaat 226 Query: 197 gctga 201 ||||| Sbjct: 227 gctga 231
>gb|BT013262.1| Lycopersicon esculentum clone 134804F, mRNA sequence Length = 1343 Score = 89.7 bits (45), Expect = 5e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 ||||||||||||||||||||||| |||| || ||||||||||| ||||||||||||||| Sbjct: 770 ttcatgtctgatctcgacgtccaaattcctaccgcttttgatccctttgctgaggcaaat 829 Query: 197 gctga 201 ||||| Sbjct: 830 gctga 834 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 275 ctgacaactgttcagggcttgaagaaaga 303 ||||||||||| ||||| ||||||||||| Sbjct: 902 ctgacaactgtgcaggggttgaagaaaga 930
>gb|DQ083224.1| Oryza sativa (indica cultivar-group) clone 5B11F72 mRNA sequence Length = 358 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| | ||| | |||||||| || ||||| ||||||||||| ||| Sbjct: 141 ttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggccaat 200 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| ||||| || || | ||| ||||||||| |||| || ||||| || |||||||| Sbjct: 201 gctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatccagcag 260 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||| ||||| ||||| ||||| |||||||| Sbjct: 261 cgtaatggccgtaagagcctgaccactgtccagggattgaagaa 304
>gb|AF380357.1|AF380357 Porteresia coarctata translational initiation factor eIF1 mRNA, complete cds Length = 773 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| | ||| | |||||||| || ||||| ||||||||||| ||| Sbjct: 153 ttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggccaat 212 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| ||||| || || | ||| ||||||||| |||| || ||||| || |||||||| Sbjct: 213 gctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatccagcag 272 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||| ||||| ||||| ||||| |||||||| Sbjct: 273 cgtaatggccgtaagagcctgaccactgtccagggattgaagaa 316
>dbj|AK120697.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170I05, full insert sequence Length = 752 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| | ||| | |||||||| || ||||| ||||||||||| ||| Sbjct: 176 ttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggccaat 235 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| ||||| || || | ||| ||||||||| |||| || ||||| || |||||||| Sbjct: 236 gctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatccagcag 295 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||| ||||| ||||| ||||| |||||||| Sbjct: 296 cgtaatggccgtaagagcctgaccactgtccagggattgaagaa 339
>dbj|AK105037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C07, full insert sequence Length = 1275 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| | ||| | |||||||| || ||||| ||||||||||| ||| Sbjct: 699 ttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggccaat 758 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| ||||| || || | ||| ||||||||| |||| || ||||| || |||||||| Sbjct: 759 gctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatccagcag 818 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||| ||||| ||||| ||||| |||||||| Sbjct: 819 cgtaatggccgtaagagcctgaccactgtccagggattgaagaa 862
>gb|AF094774.1|AF094774 Oryza sativa translation initiation factor (GOS2) mRNA, complete cds Length = 744 Score = 87.7 bits (44), Expect = 2e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| | ||| | |||||||| || ||||| ||||||||||| ||| Sbjct: 156 ttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggccaat 215 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| ||||| || || | ||| ||||||||| |||| || ||||| || |||||||| Sbjct: 216 gctggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatccagcag 275 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||| ||||| ||||| ||||| |||||||| Sbjct: 276 cgtaatggccgtaagagcctgaccactgtccagggattgaagaa 319
>gb|DQ222518.1| Solanum tuberosum clone 120A06 unknown mRNA Length = 699 Score = 81.8 bits (41), Expect = 1e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| |||| ||| || ||||||||||||||||||||||||||| Sbjct: 143 ttcatgtctgatctcgacatccaaattcgtaccgcttttgatccgtttgctgaggcaaat 202 Query: 197 gctga 201 ||||| Sbjct: 203 gctga 207 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 275 ctgacaactgttcagggcttgaagaaaga 303 ||||||||||| ||||| ||||||||||| Sbjct: 275 ctgacaactgtgcaggggttgaagaaaga 303
>ref|XM_478516.1| Oryza sativa (japonica cultivar-group), mRNA Length = 348 Score = 81.8 bits (41), Expect = 1e-12 Identities = 131/161 (81%) Strand = Plus / Plus Query: 140 atgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaatgct 199 ||||||||||||||| | ||| | |||||||| || ||||| ||||||||||| |||||| Sbjct: 1 atgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggccaatgct 60 Query: 200 gaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcagcgc 259 | ||||| || || | ||| ||||||||| |||| || ||||| || |||||||||| Sbjct: 61 ggagactctggtgcggctgcaggatcaaaggactacgttcatgtacgcatccagcagcgt 120 Query: 260 aacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || | ||||| ||||| ||||| ||||| |||||||| Sbjct: 121 aatggccgtaagagcctgaccactgtccagggattgaagaa 161
>emb|AJ309088.1|PPI309088 Pinus pinaster partial mRNA for putative translation factor Length = 635 Score = 73.8 bits (37), Expect = 3e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 233 tatgtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgt 285 |||||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct: 282 tatgtgcatgtgcgcatacagcagcgcaacggtagaaagagtctgacaactgt 334
>ref|NM_104307.3| Arabidopsis thaliana translation initiation factor AT1G54290 mRNA, complete cds Length = 811 Score = 71.9 bits (36), Expect = 1e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 136 gttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaa 195 ||||||||||||||| || || || || || ||||| ||||||||||| ||||| ||||| Sbjct: 241 gttcatgtctgatcttgaagttcaagtccccactgcctttgatccgttcgctgatgcaaa 300 Query: 196 tgctgaggactc 207 |||||||||||| Sbjct: 301 tgctgaggactc 312
>gb|AF372910.1|AF372910 Arabidopsis thaliana At1g54290/F20D21_53 mRNA, complete cds Length = 742 Score = 71.9 bits (36), Expect = 1e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 136 gttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaa 195 ||||||||||||||| || || || || || ||||| ||||||||||| ||||| ||||| Sbjct: 179 gttcatgtctgatcttgaagttcaagtccccactgcctttgatccgttcgctgatgcaaa 238 Query: 196 tgctgaggactc 207 |||||||||||| Sbjct: 239 tgctgaggactc 250
>emb|BX817291.1|CNS0ACKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL12ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 748 Score = 71.9 bits (36), Expect = 1e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 136 gttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaa 195 ||||||||||||||| || || || || || ||||| ||||||||||| ||||| ||||| Sbjct: 178 gttcatgtctgatcttgaagttcaagtccccactgcctttgatccgttcgctgatgcaaa 237 Query: 196 tgctgaggactc 207 |||||||||||| Sbjct: 238 tgctgaggactc 249
>ref|NM_124857.2| Arabidopsis thaliana translation initiation factor AT5G54760 mRNA, complete cds Length = 706 Score = 69.9 bits (35), Expect = 5e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 ||||||||||| || ||| ||||||||| ||||| ||||||||||||||||| || ||| Sbjct: 144 ttcatgtctgaacttgactcccaggttcccactgcctttgatccgtttgctgatgcgaat 203 Query: 197 gctgaggactc 207 | ||||||||| Sbjct: 204 gttgaggactc 214
>gb|DQ083225.1| Oryza sativa (indica cultivar-group) clone 5B11G73 mRNA sequence Length = 268 Score = 69.9 bits (35), Expect = 5e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| | ||| | |||||||| || ||||| ||||||||||| ||| Sbjct: 162 ttcatgtctgatctcgacattcagatcccaactgccttcgatccctttgctgaggccaat 221 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgt 243 |||| ||||| || || | ||| ||||||||| |||| || ||||| Sbjct: 222 gctggagactctggtgcggctgcaggatcaaaggactacgttcatgt 268
>gb|BT016285.1| Zea mays clone Contig118 mRNA sequence Length = 861 Score = 63.9 bits (32), Expect = 3e-07 Identities = 131/164 (79%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| | ||| | |||||||| || ||||| || |||||||| ||| Sbjct: 243 ttcatgtctgatctcgacattcagatcccaactgccttcgatcccttcgctgaggccaat 302 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| |||||| || || | || || |||||| |||| || || ||||| |||||||| Sbjct: 303 gctggggactctggtgcggcagcagggtcaaaggactacgtacacgtgcgcatccagcag 362 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||| ||||| || || ||||| |||||||| Sbjct: 363 cgtaatggtcgcaagagcctgactaccgtccagggattgaagaa 406
>gb|BT000649.1| Arabidopsis thaliana putative protein translation factor Sui1 homolog (At1g54290/F20D21_53) mRNA, complete cds Length = 342 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 140 atgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaatgct 199 ||||||||||| || || || || || ||||| ||||||||||| ||||| ||||||||| Sbjct: 1 atgtctgatcttgaagttcaagtccccactgcctttgatccgttcgctgatgcaaatgct 60 Query: 200 gaggactc 207 |||||||| Sbjct: 61 gaggactc 68
>gb|AF508969.1| Triticum aestivum translation initiation factor mRNA, complete cds Length = 742 Score = 63.9 bits (32), Expect = 3e-07 Identities = 131/164 (79%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||| ||||| ||| | |||||||| ||||| || ||||| ||||| ||| Sbjct: 133 ttcatgtctgatcttgacgttcagatcccaactgcctttgacccctttgccgaggcgaat 192 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| |||| | || || | ||| |||||||| |||| || ||||| || |||||||| Sbjct: 193 gctggggacgctggtgcagctgccggatcaaaagactacgttcatgtacgcatccagcag 252 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||| ||||| ||||| ||||| ||||||| Sbjct: 253 cgtaatggtcgcaagagcctgaccactgtccagggtctgaagaa 296
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 177 atccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactatg 236 ||||||||| || |||||||||||||||||| | | |||||||||||||||| | |||| Sbjct: 10475958 atccgtttgtggaagcaaatgctgaggactccagtgttggtgctggatcaaaggaatatg 10476017 Query: 237 tgca 240 |||| Sbjct: 10476018 tgca 10476021 Score = 58.0 bits (29), Expect = 2e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 176 gatccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactat 235 ||||| ||||||||||| ||||||| ||||| || || | ||| ||||||||| |||| Sbjct: 20680391 gatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaaaggactac 20680332 Query: 236 gtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttg 295 || ||||| || |||||||||| || || | ||||| ||||| ||||| ||||| ||| Sbjct: 20680331 gttcatgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtccagggattg 20680272 Query: 296 aagaa 300 ||||| Sbjct: 20680271 aagaa 20680267 Score = 40.1 bits (20), Expect = 4.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 259 caacggaagaaagagtctgacaactgttcagggcttgaagaaagactacagc 310 |||||||||||| || |||| | |||||| |||||||||| ||| |||||| Sbjct: 10476042 caacggaagaaaaagactgattattgttcaaggcttgaagagagaatacagc 10476093
>gb|BT005836.1| Arabidopsis thaliana At5g54760 gene, complete cds Length = 342 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 140 atgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaatgct 199 |||||||| || ||| ||||||||| ||||| ||||||||||||||||| || |||| | Sbjct: 1 atgtctgaacttgactcccaggttcccactgcctttgatccgtttgctgatgcgaatgtt 60 Query: 200 gaggactc 207 |||||||| Sbjct: 61 gaggactc 68
>dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0042E08 Length = 166257 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 177 atccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactatg 236 ||||||||| || |||||||||||||||||| | | |||||||||||||||| | |||| Sbjct: 27287 atccgtttgtggaagcaaatgctgaggactccagtgttggtgctggatcaaaggaatatg 27346 Query: 237 tgca 240 |||| Sbjct: 27347 tgca 27350 Score = 40.1 bits (20), Expect = 4.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 259 caacggaagaaagagtctgacaactgttcagggcttgaagaaagactacagc 310 |||||||||||| || |||| | |||||| |||||||||| ||| |||||| Sbjct: 27371 caacggaagaaaaagactgattattgttcaaggcttgaagagagaatacagc 27422
>dbj|AK101048.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033009H10, full insert sequence Length = 2452 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 177 atccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactatg 236 ||||||||| || |||||||||||||||||| | | |||||||||||||||| | |||| Sbjct: 2045 atccgtttgtggaagcaaatgctgaggactccagtgttggtgctggatcaaaggaatatg 2104 Query: 237 tgca 240 |||| Sbjct: 2105 tgca 2108 Score = 40.1 bits (20), Expect = 4.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 259 caacggaagaaagagtctgacaactgttcagggcttgaagaaagactacagc 310 |||||||||||| || |||| | |||||| |||||||||| ||| |||||| Sbjct: 2129 caacggaagaaaaagactgattattgttcaaggcttgaagagagaatacagc 2180
>dbj|AK067031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091L18, full insert sequence Length = 2921 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 177 atccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactatg 236 ||||||||| || |||||||||||||||||| | | |||||||||||||||| | |||| Sbjct: 2575 atccgtttgtggaagcaaatgctgaggactccagtgttggtgctggatcaaaggaatatg 2634 Query: 237 tgca 240 |||| Sbjct: 2635 tgca 2638 Score = 40.1 bits (20), Expect = 4.1 Identities = 44/52 (84%) Strand = Plus / Plus Query: 259 caacggaagaaagagtctgacaactgttcagggcttgaagaaagactacagc 310 |||||||||||| || |||| | |||||| |||||||||| ||| |||||| Sbjct: 2659 caacggaagaaaaagactgattattgttcaaggcttgaagagagaatacagc 2710
>gb|AY103847.1| Zea mays PCO105184 mRNA sequence Length = 1006 Score = 63.9 bits (32), Expect = 3e-07 Identities = 131/164 (79%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| | ||| | |||||||| || ||||| || |||||||| ||| Sbjct: 361 ttcatgtctgatctcgacattcagatcccaactgccttcgatcccttcgctgaggccaat 420 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| |||||| || || | || || |||||| |||| || || ||||| |||||||| Sbjct: 421 gctggggactctggtgcggcagcagggtcaaaggactacgtacacgtgcgcatccagcag 480 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||| ||||| || || ||||| |||||||| Sbjct: 481 cgtaatggtcgcaagagcctgactaccgtccagggattgaagaa 524
>gb|AF034944.1|AF034944 Zea mays translation initiation factor GOS2 (TIF) mRNA, complete cds Length = 759 Score = 63.9 bits (32), Expect = 3e-07 Identities = 131/164 (79%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 |||||||||||||||||| | ||| | |||||||| || ||||| || |||||||| ||| Sbjct: 133 ttcatgtctgatctcgacattcagatcccaactgccttcgatcccttcgctgaggccaat 192 Query: 197 gctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtccagcag 256 |||| |||||| || || | || || |||||| |||| || || ||||| |||||||| Sbjct: 193 gctggggactctggtgcggcagcagggtcaaaggactacgtacacgtgcgcatccagcag 252 Query: 257 cgcaacggaagaaagagtctgacaactgttcagggcttgaagaa 300 || || || | ||||| ||||| || || ||||| |||||||| Sbjct: 253 cgtaatggtcgcaagagcctgaccaccgtccagggattgaagaa 296
>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0014C03, complete sequence Length = 143739 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 192 caaatgctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtcc 251 ||||||||||||||||| | | | ||| || ||||||| ||||||||||||||| | | Sbjct: 118342 caaatgctgaggactccagtgtttgtgttgcatcaaaggactatgtgcatgtgcccattc 118283 Query: 252 agcagcgcaacggaagaaagagtctga 278 | |||| |||||||||||||| ||||| Sbjct: 118282 aacagcacaacggaagaaagaatctga 118256
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 192 caaatgctgaggactccggcgctggtgctggatcaaagaactatgtgcatgtgcgtgtcc 251 ||||||||||||||||| | | | ||| || ||||||| ||||||||||||||| | | Sbjct: 27597 caaatgctgaggactccagtgtttgtgttgcatcaaaggactatgtgcatgtgcccattc 27538 Query: 252 agcagcgcaacggaagaaagagtctga 278 | |||| |||||||||||||| ||||| Sbjct: 27537 aacagcacaacggaagaaagaatctga 27511
>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence Length = 127640 Score = 60.0 bits (30), Expect = 4e-06 Identities = 104/128 (81%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 176 gatccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactat 235 ||||| |||||||||||||||||||||||| |||| ||||| | ||||||| | || Sbjct: 53484 gatccttttgctgaggcaaatgctgaggacgccggtgctgggtc---atcaaaggagtac 53540 Query: 236 gtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttg 295 || ||| | ||| | |||||||| || || ||||| || |||||||||| ||||| ||| Sbjct: 53541 gtccatattcgtatacagcagcgaaatggtagaaaaagcttgacaactgtccagggattg 53600 Query: 296 aagaaaga 303 |||||||| Sbjct: 53601 aagaaaga 53608
>emb|X51910.1|OSGOS2G O.sativa (rice) constitutive GOS2 gene Length = 3192 Score = 58.0 bits (29), Expect = 2e-05 Identities = 101/125 (80%) Strand = Plus / Plus Query: 176 gatccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactat 235 ||||| ||||||||||| ||||||| ||||| || || | ||| ||||||||| |||| Sbjct: 2321 gatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaaaggactac 2380 Query: 236 gtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttg 295 || ||||| || |||||||||| || || | ||||| ||||| ||||| ||||| ||| Sbjct: 2381 gttcatgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtccagggattg 2440 Query: 296 aagaa 300 ||||| Sbjct: 2441 aagaa 2445
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 58.0 bits (29), Expect = 2e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 176 gatccgtttgctgaggcaaatgctgaggactccggcgctggtgctggatcaaagaactat 235 ||||| ||||||||||| ||||||| ||||| || || | ||| ||||||||| |||| Sbjct: 33141 gatccctttgctgaggccaatgctggagactctggtgcggctgcaggatcaaaggactac 33082 Query: 236 gtgcatgtgcgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttg 295 || ||||| || |||||||||| || || | ||||| ||||| ||||| ||||| ||| Sbjct: 33081 gttcatgtacgcatccagcagcgtaatggccgtaagagcctgaccactgtccagggattg 33022 Query: 296 aagaa 300 ||||| Sbjct: 33021 aagaa 33017
>gb|L33876.1|TOBPASEQC Nicotiana tabacum (clone 12) activating factor DNA sequence Length = 243 Score = 56.0 bits (28), Expect = 7e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 145 tgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggc 192 |||| ||||||||||| | ||| ||||||||||||| ||||||||||| Sbjct: 99 tgatatcgacgtccagatcccatctgcttttgatccatttgctgaggc 146
>gb|L41693.1|PS300016E Eucalyptus globulus bicostata symbiont (F00058) mRNA, ESTun016 Length = 256 Score = 52.0 bits (26), Expect = 0.001 Identities = 49/56 (87%), Gaps = 3/56 (5%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgt---ccaggttccaactgcttttgatccgtttgctga 189 ||||||||||| ||||||| ||||||||||||| |||||||||| |||||||| Sbjct: 20 ttcatgtctgagctcgacggtgcccaggttccaactacttttgatccttttgctga 75
>emb|AJ519839.1|CAR519839 Coffea arabica mRNA for SUI1 protein Length = 678 Score = 50.1 bits (25), Expect = 0.004 Identities = 55/65 (84%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 ||||||||||| |||| ||||| |||| |||||||||| || ||||||||||| ||| Sbjct: 132 ttcatgtctgaattcgatctccagactccagctgcttttgacccttttgctgaggccaat 191 Query: 197 gctga 201 ||||| Sbjct: 192 gctga 196
>emb|AJ249397.1|PPR249397 Phleum pratense mRNA for putative protein translation factor SUI (SUI1 gene), partial Length = 560 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 269 aagagtctgacaactgttcagggcttgaagaa 300 ||||||||||| ||||| |||||||||||||| Sbjct: 70 aagagtctgactactgtccagggcttgaagaa 101
>gb|AC005287.4| Arabidopsis thaliana chromosome I BAC F20D21 genomic sequence, complete sequence Length = 143186 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Minus Query: 176 gatccgtttgctgaggcaaatgctgaggactc 207 |||||||| ||||| ||||||||||||||||| Sbjct: 40704 gatccgttcgctgatgcaaatgctgaggactc 40673
>ref|NM_118847.2| Arabidopsis thaliana translation initiation factor AT4G27130 mRNA, complete cds Length = 811 Score = 46.1 bits (23), Expect = 0.066 Identities = 59/71 (83%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 ||||||||||| || || |||||| || ||||| || || ||||||||||| || ||| Sbjct: 248 ttcatgtctgaacttgattcccaggtccctactgccttcgacccgtttgctgatgcgaat 307 Query: 197 gctgaggactc 207 ||||||||||| Sbjct: 308 gctgaggactc 318
>gb|BC067680.1| Danio rerio v-maf musculoaponeurotic fibrosarcoma oncogene homolog g (avian), 2, mRNA (cDNA clone MGC:85896 IMAGE:6970881), complete cds Length = 2377 Score = 46.1 bits (23), Expect = 0.066 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 agctcacacatcaagacaataaa 94 ||||||||||||||||||||||| Sbjct: 2100 agctcacacatcaagacaataaa 2078
>gb|AY060537.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 342 Score = 46.1 bits (23), Expect = 0.066 Identities = 44/51 (86%) Strand = Plus / Plus Query: 157 ccaggttccaactgcttttgatccgtttgctgaggcaaatgctgaggactc 207 |||||| || ||||| || || ||||||||||| || |||||||||||||| Sbjct: 18 ccaggtccctactgccttcgacccgtttgctgatgcgaatgctgaggactc 68
>gb|AY037234.1| Arabidopsis thaliana AT4g27130/T24A18_80 mRNA, complete cds Length = 737 Score = 46.1 bits (23), Expect = 0.066 Identities = 59/71 (83%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 ||||||||||| || || |||||| || ||||| || || ||||||||||| || ||| Sbjct: 200 ttcatgtctgaacttgattcccaggtccctactgccttcgacccgtttgctgatgcgaat 259 Query: 197 gctgaggactc 207 ||||||||||| Sbjct: 260 gctgaggactc 270
>emb|BX828314.1|CNS0A3U9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH75ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 738 Score = 46.1 bits (23), Expect = 0.066 Identities = 59/71 (83%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 ||||||||||| || || |||||| || ||||| || || ||||||||||| || ||| Sbjct: 177 ttcatgtctgaacttgattcccaggtccctactgccttcgacccgtttgctgatgcgaat 236 Query: 197 gctgaggactc 207 ||||||||||| Sbjct: 237 gctgaggactc 247
>emb|BX828730.1|CNS0A3GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 46.1 bits (23), Expect = 0.066 Identities = 59/71 (83%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 ||||||||||| || || |||||| || ||||| || || ||||||||||| || ||| Sbjct: 178 ttcatgtctgaacttgattcccaggtccctactgccttcgacccgtttgctgatgcgaat 237 Query: 197 gctgaggactc 207 ||||||||||| Sbjct: 238 gctgaggactc 248
>ref|NM_212941.1| Danio rerio v-maf musculoaponeurotic fibrosarcoma oncogene homolog g (avian), 2 (mafg2), mRNA Length = 2377 Score = 46.1 bits (23), Expect = 0.066 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 agctcacacatcaagacaataaa 94 ||||||||||||||||||||||| Sbjct: 2100 agctcacacatcaagacaataaa 2078
>gb|AY088288.1| Arabidopsis thaliana clone 5206 mRNA, complete sequence Length = 805 Score = 46.1 bits (23), Expect = 0.066 Identities = 59/71 (83%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 ||||||||||| || || |||||| || ||||| || || ||||||||||| || ||| Sbjct: 248 ttcatgtctgaacttgattcccaggtccctactgccttcgacccgtttgctgatgcgaat 307 Query: 197 gctgaggactc 207 ||||||||||| Sbjct: 308 gctgaggactc 318
>gb|AF098672.1|AF098672 Brassica oleracea translation initiation factor nps45 mRNA, complete cds Length = 560 Score = 46.1 bits (23), Expect = 0.066 Identities = 59/71 (83%) Strand = Plus / Plus Query: 137 ttcatgtctgatctcgacgtccaggttccaactgcttttgatccgtttgctgaggcaaat 196 ||||||||||| || || |||||| || ||||| || || ||||||||||| || ||| Sbjct: 25 ttcatgtctgaacttgattcccaggtccctactgccttcgacccgtttgctgatgcgaat 84 Query: 197 gctgaggactc 207 ||||||||||| Sbjct: 85 gctgaggactc 95
>gb|AC021736.9| Homo sapiens chromosome 8, clone RP11-115J16, complete sequence Length = 158806 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 gtgttgcctttctcctcctccc 36 |||||||||||||||||||||| Sbjct: 109987 gtgttgcctttctcctcctccc 110008
>gb|AC022784.7| Homo sapiens chromosome 8, clone RP11-10A14, complete sequence Length = 187253 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 15 gtgttgcctttctcctcctccc 36 |||||||||||||||||||||| Sbjct: 42093 gtgttgcctttctcctcctccc 42114
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 44.1 bits (22), Expect = 0.26 Identities = 55/66 (83%) Strand = Plus / Plus Query: 245 cgtgtccagcagcgcaacggaagaaagagtctgacaactgttcagggcttgaagaaagac 304 |||||||||||||| || || || || || ||||||| || |||||| |||||||||| Sbjct: 4022 cgtgtccagcagcgaaatggtaggaaaagcttgacaaccgtccagggcctgaagaaagag 4081 Query: 305 tacagc 310 |||||| Sbjct: 4082 tacagc 4087 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 176 gatccgtttgctgaggcaaatgctgaggactc 207 |||||||||||||| || |||| ||||||||| Sbjct: 3959 gatccgtttgctgatgcgaatgttgaggactc 3990
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ttgctgaggcaaatgctgagg 203 ||||||||||||||||||||| Sbjct: 38737 ttgctgaggcaaatgctgagg 38757
>ref|XM_358340.5| PREDICTED: Mus musculus nucleoporin 214, transcript variant 1 (Nup214), mRNA Length = 8209 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 1927 ccgtgttgccgttctcctcctcccc 1951
>ref|XM_989973.1| PREDICTED: Mus musculus nucleoporin 214, transcript variant 5 (Nup214), mRNA Length = 2642 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 1927 ccgtgttgccgttctcctcctcccc 1951
>ref|XM_990012.1| PREDICTED: Mus musculus nucleoporin 214, transcript variant 6 (Nup214), mRNA Length = 3364 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 1927 ccgtgttgccgttctcctcctcccc 1951
>ref|XM_990051.1| PREDICTED: Mus musculus nucleoporin 214, transcript variant 7 (Nup214), mRNA Length = 4281 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 1927 ccgtgttgccgttctcctcctcccc 1951
>ref|XM_990078.1| PREDICTED: Mus musculus nucleoporin 214, transcript variant 8 (Nup214), mRNA Length = 5765 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 273 ccgtgttgccgttctcctcctcccc 297
>ref|XM_990101.1| PREDICTED: Mus musculus nucleoporin 214, transcript variant 9 (Nup214), mRNA Length = 8552 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 2324 ccgtgttgccgttctcctcctcccc 2348
>ref|XM_990130.1| PREDICTED: Mus musculus nucleoporin 214, transcript variant 10 (Nup214), mRNA Length = 8155 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 1927 ccgtgttgccgttctcctcctcccc 1951
>ref|XM_990157.1| PREDICTED: Mus musculus nucleoporin 214, transcript variant 11 (Nup214), mRNA Length = 8209 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 1927 ccgtgttgccgttctcctcctcccc 1951
>ref|XM_917102.2| PREDICTED: Mus musculus nucleoporin 214, transcript variant 2 (Nup214), mRNA Length = 8210 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 1928 ccgtgttgccgttctcctcctcccc 1952
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 ccgtttgctgaggcaaatgctgaggactc 207 ||||||||||| || |||||||||||||| Sbjct: 109175 ccgtttgctgatgcgaatgctgaggactc 109147
>emb|AL035680.1|ATT24A18 Arabidopsis thaliana DNA chromosome 4, BAC clone T24A18, partial sequence (ESSA project) Length = 45980 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 179 ccgtttgctgaggcaaatgctgaggactc 207 ||||||||||| || |||||||||||||| Sbjct: 25664 ccgtttgctgatgcgaatgctgaggactc 25636
>gb|BC039282.1| Mus musculus nucleoporin 214, mRNA (cDNA clone MGC:37347 IMAGE:4976266), complete cds Length = 4962 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 273 ccgtgttgccgttctcctcctcccc 297
>gb|AC092562.4| Papio hamadryas BAC RP41-285I13 (Rosewell Park Cancer Institute BAC Library) complete sequence Length = 183586 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 gttgcctttctcctcctcccc 37 ||||||||||||||||||||| Sbjct: 111275 gttgcctttctcctcctcccc 111255
>dbj|AK162214.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420458G07 product:Warning: possibly chimeric clone, full insert sequence Length = 2440 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 612 ccgtgttgccgttctcctcctcccc 636
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ttgctgaggcaaatgctgagg 203 ||||||||||||||||||||| Sbjct: 28079604 ttgctgaggcaaatgctgagg 28079624 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ttgctgaggcaaatgctgag 202 |||||||||||||||||||| Sbjct: 21437476 ttgctgaggcaaatgctgag 21437457
>gb|AY855167.1| Sus scrofa RPGR mRNA, partial cds Length = 1737 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ttgcctttctcctcctccccc 38 ||||||||||||||||||||| Sbjct: 257 ttgcctttctcctcctccccc 237
>dbj|AK122189.1| Mus musculus mRNA for mKIAA0023 protein Length = 6558 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 1885 ccgtgttgccgttctcctcctcccc 1909
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 ttgctgaggcaaatgctgagg 203 ||||||||||||||||||||| Sbjct: 28064482 ttgctgaggcaaatgctgagg 28064502 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ttgctgaggcaaatgctgag 202 |||||||||||||||||||| Sbjct: 21747675 ttgctgaggcaaatgctgag 21747656
>emb|AL928893.10| Mouse DNA sequence from clone RP23-55I14 on chromosome 2, complete sequence Length = 235241 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 ccgtgttgcctttctcctcctcccc 37 |||||||||| |||||||||||||| Sbjct: 83021 ccgtgttgccgttctcctcctcccc 83045
>gb|U81042.1|ATU81042 Arabidopsis thaliana translation initiation factor gene, complete cds Length = 1787 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 179 ccgtttgctgaggcaaatgctgaggactc 207 ||||||||||| || |||||||||||||| Sbjct: 1093 ccgtttgctgatgcgaatgctgaggactc 1121
>gb|AC009343.9| Drosophila melanogaster clone BACR08L17, complete sequence Length = 182492 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tgcgtgtccagcagcgcaac 262 |||||||||||||||||||| Sbjct: 123097 tgcgtgtccagcagcgcaac 123116
>ref|XM_516381.1| PREDICTED: Pan troglodytes similar to translation factor sui1 homolog (LOC460285), mRNA Length = 599 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 361 tccagcaacggaacggcagaaagacactgactactgttcagggc 404
>gb|AC123708.17| Mus musculus chromosome 9, clone RP23-366E1, complete sequence Length = 195563 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 |||||||||||||||| || |||| ||||| ||||| |||||| Sbjct: 128486 tccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 128443
>gb|AC159376.12| Mus musculus 10 BAC RP23-114N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223292 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 acacatcaagacaataaata 96 |||||||||||||||||||| Sbjct: 98444 acacatcaagacaataaata 98425
>gb|AY505029.1| Helicobacter pylori isolate 4a hypothetical protein gene, partial cds; hypervariable region; and 16S ribosomal RNA gene, partial sequence Length = 1297 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 caatcaaaccaaacaacaag 136 |||||||||||||||||||| Sbjct: 698 caatcaaaccaaacaacaag 717
>gb|DQ279927.1| Human herpesvirus 4 strain AG876, complete genome Length = 172764 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcatgtgcgtgtccagcagc 257 |||||||||||||||||||| Sbjct: 73747 gcatgtgcgtgtccagcagc 73728
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ccaatcaaaccaaacaacaa 135 |||||||||||||||||||| Sbjct: 4648 ccaatcaaaccaaacaacaa 4629
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ttgctgaggcaaatgctgag 202 |||||||||||||||||||| Sbjct: 95226 ttgctgaggcaaatgctgag 95207
>gb|AC102432.9| Mus musculus chromosome 19, clone RP24-114A21, complete sequence Length = 199240 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 tatgtgcatgtgcgtgtcca 252 |||||||||||||||||||| Sbjct: 123617 tatgtgcatgtgcgtgtcca 123636
>gb|AC161413.5| Mus musculus chromosome 19, clone RP23-106D17, complete sequence Length = 215356 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 tatgtgcatgtgcgtgtcca 252 |||||||||||||||||||| Sbjct: 7446 tatgtgcatgtgcgtgtcca 7427
>ref|NM_005875.2| Homo sapiens eukaryotic translation initiation factor 1B (EIF1B), mRNA Length = 1014 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 364 tccagcaacggaacggcagaaagacactgactactgttcagggc 407
>gb|BC006996.1| Homo sapiens eukaryotic translation initiation factor 1B, mRNA (cDNA clone MGC:12271 IMAGE:4044439), complete cds Length = 1023 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 348 tccagcaacggaacggcagaaagacactgactactgttcagggc 391
>gb|AC104186.2| Homo sapiens chromosome 3 clone RP11-391M1, complete sequence Length = 186317 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 20512 tccagcaacggaacggcagaaagacactgactactgttcagggc 20555
>emb|CR610118.1| full-length cDNA clone CS0DI083YG09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 869 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 242 tccagcaacggaacggcagaaagacactgactactgttcagggc 285
>emb|CR601510.1| full-length cDNA clone CS0DI009YF18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 706 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 161 tccagcaacggaacggcagaaagacactgactactgttcagggc 204
>emb|CR600400.1| full-length cDNA clone CS0DN002YE04 of Adult brain of Homo sapiens (human) Length = 790 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 163 tccagcaacggaacggcagaaagacactgactactgttcagggc 206
>ref|NM_176144.1| Drosophila melanogaster CG33144-RA (CG33144), mRNA Length = 4515 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 tgcgtgtccagcagcgcaac 262 |||||||||||||||||||| Sbjct: 1743 tgcgtgtccagcagcgcaac 1724
>gb|AC159377.8| Mus musculus 10 BAC RP23-335D19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205483 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 acacatcaagacaataaata 96 |||||||||||||||||||| Sbjct: 151457 acacatcaagacaataaata 151438
>gb|BC033505.1| Mus musculus eukaryotic translation initiation factor 1B, mRNA (cDNA clone MGC:36534 IMAGE:4209443), complete cds Length = 910 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 |||||||||||||||| || |||| ||||| ||||| |||||| Sbjct: 280 tccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 323
>gb|BC030319.1| Mus musculus eukaryotic translation initiation factor 1B, mRNA (cDNA clone MGC:40900 IMAGE:5372299), complete cds Length = 891 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 |||||||||||||||| || |||| ||||| ||||| |||||| Sbjct: 178 tccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 221
>ref|NM_026892.1| Mus musculus eukaryotic translation initiation factor 1B (Eif1b), mRNA Length = 885 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 |||||||||||||||| || |||| ||||| ||||| |||||| Sbjct: 276 tccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 319
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 tcaaaccaaacaacaagttc 139 |||||||||||||||||||| Sbjct: 2237200 tcaaaccaaacaacaagttc 2237181
>emb|CR542223.1| Homo sapiens full open reading frame cDNA clone RZPDo834C1025D for gene GC20, translation factor sui1 homolog; complete cds, without stopcodon Length = 339 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 104 tccagcaacggaacggcagaaagacactgactactgttcagggc 147
>dbj|AB169765.1| Macaca fascicularis brain cDNA, clone: QtrA-11743, similar to human translation factor sui1 homolog (GC20), mRNA, RefSeq: NM_005875.1 Length = 1019 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 364 tccagcaacggaacggcagaaagacactgactactgttcagggc 407
>dbj|AK013965.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001N14 product:ADULT MALE CEREBELLUM CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:1500010M16:SIMILAR TO PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG, FULL INSERT SEQUENCE homolog [Mus musculus], full insert sequence Length = 849 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 |||||||||||||||| || |||| ||||| ||||| |||||| Sbjct: 282 tccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 325
>dbj|AK005192.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500010M16 product:Protein translation factor SUI1 homolog GC20 homolog [Homo sapiens], full insert sequence Length = 885 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 |||||||||||||||| || |||| ||||| ||||| |||||| Sbjct: 276 tccagcagcgcaacggcaggaagacgctgaccactgtgcagggc 319
>dbj|AK223448.1| Homo sapiens mRNA for translation factor sui1 homolog, clone: FCC113D06 Length = 929 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 359 tccagcaacggaacggcagaaagacactgactactgttcagggc 402
>gb|BT003306.1| Drosophila melanogaster GH08706 full insert cDNA Length = 4533 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 tgcgtgtccagcagcgcaac 262 |||||||||||||||||||| Sbjct: 1743 tgcgtgtccagcagcgcaac 1724
>gb|AF263452.1|AF263452 Homo sapiens translational factor eIF-1 mRNA, complete cds Length = 945 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 337 tccagcaacggaacggcagaaagacactgactactgttcagggc 380
>gb|AF077052.1| Homo sapiens protein translation factor sui1 homolog mRNA, complete cds Length = 992 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 345 tccagcaacggaacggcagaaagacactgactactgttcagggc 388
>gb|AY894036.1| Synthetic construct Homo sapiens clone FLH131152.01L translation factor sui1-like (GC20) mRNA, partial cds Length = 342 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 249 tccagcagcgcaacggaagaaagagtctgacaactgttcagggc 292 ||||||| || ||||| ||||||| ||||| |||||||||||| Sbjct: 104 tccagcaacggaacggcagaaagacactgactactgttcagggc 147
>emb|AL840629.24| Mouse DNA sequence from clone RP23-334A5 on chromosome 4, complete sequence Length = 214140 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 ccaatcaaaccaaacaacaa 135 |||||||||||||||||||| Sbjct: 207713 ccaatcaaaccaaacaacaa 207732
>emb|V01555.2|EBV Epstein-Barr virus (EBV) genome, strain B95-8 Length = 172281 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcatgtgcgtgtccagcagc 257 |||||||||||||||||||| Sbjct: 85901 gcatgtgcgtgtccagcagc 85882
>gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22 of 73 of the complete sequence Length = 257907 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tgcgtgtccagcagcgcaac 262 |||||||||||||||||||| Sbjct: 115011 tgcgtgtccagcagcgcaac 115030
>dbj|AP002500.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2240G15, complete sequences Length = 49000 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gtttgctgaggcaaatgctgagga 204 ||||||||| |||||||||||||| Sbjct: 27397 gtttgctgaagcaaatgctgagga 27420
>gb|AY961628.3| Human herpesvirus 4 strain GD1, complete genome Length = 171657 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcatgtgcgtgtccagcagc 257 |||||||||||||||||||| Sbjct: 73631 gcatgtgcgtgtccagcagc 73612
>emb|AJ507799.2|HHV507799 Human herpesvirus 4 complete wild type genome Length = 171823 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcatgtgcgtgtccagcagc 257 |||||||||||||||||||| Sbjct: 73613 gcatgtgcgtgtccagcagc 73594
>gb|M80517.1|HS4B958RAJ Epstein-Barr virus, artifactual joining of B95-8 complete genome and the sequences from Raji of the large deletion found in B95-8 Length = 184113 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gcatgtgcgtgtccagcagc 257 |||||||||||||||||||| Sbjct: 85901 gcatgtgcgtgtccagcagc 85882
>gb|L13695.1|AGLRPE Aglaothamnion neglectum R-phycoerythrin gamma-subunit mRNA, complete cds Length = 1273 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cctcccccgcgttcgccgtc 50 |||||||||||||||||||| Sbjct: 166 cctcccccgcgttcgccgtc 185 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,926,605 Number of Sequences: 3902068 Number of extensions: 2926605 Number of successful extensions: 74435 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74029 Number of HSP's gapped (non-prelim): 402 length of query: 310 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 288 effective length of database: 17,147,199,772 effective search space: 4938393534336 effective search space used: 4938393534336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
