>GSHB_NITEU (Q82V16) Glutathione synthetase (EC 6.3.2.3) (Glutathione synthase)|
           (GSH synthetase) (GSH-S) (GSHase)
          Length = 320

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = -3

Query: 379 VEQRHVVWHAGEVL---RRLPLDDPPEGDHRRQEE 284
           ++Q  + W   +V+   R L L DPPEGDHR  EE
Sbjct: 37  LQQNDLAWKDHQVIGFARPLTLLDPPEGDHRWYEE 71

>PGFRB_CANFA (Q6QNF3) Beta platelet-derived growth factor receptor precursor (EC|
           2.7.10.1) (PDGF-R-beta)
          Length = 1103

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -3

Query: 406 QPVPCG*EAVEQRHVVWHAGEVLRRLPLDDPPE--GDHRRQEEEQSNNIARDPEEE 245
           Q V C    + Q H+ W     L+R P + PP   G+   +E +   N+   PE++
Sbjct: 432 QTVRCRGRGMPQPHLTWSTCSDLKRCPRELPPTPLGNSSEEESQLETNVTYWPEDQ 487

>STB3_YEAST (Q12427) Protein STB3 (SIN3-binding protein 3)|
          Length = 513

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = -1

Query: 414 TNGNPYHADRRQLSSVMLYGTPEKSSVDFLLMILQKVTTGDRKRNRAITLPETP 253
           +NG+PY   RR+   V    TPE    +   +I QK+    R R R+   P TP
Sbjct: 242 SNGDPYSFGRRRSQVVFADSTPENIEHE---IIAQKIRPLLRNRRRSSIKPHTP 292

>PGFRB_HUMAN (P09619) Beta platelet-derived growth factor receptor precursor (EC|
           2.7.10.1) (PDGF-R-beta) (CD140b antigen)
          Length = 1106

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = -3

Query: 406 QPVPCG*EAVEQRHVVWHAGEVLRRLPLDDPPE--GDHRRQEEEQSNNIARDPEEE 245
           Q V C    + Q +++W A   L+R P + PP   G+   +E +   N+    EE+
Sbjct: 432 QTVRCRGRGMPQPNIIWSACRDLKRCPRELPPTLLGNSSEEESQLETNVTYWEEEQ 487

>YM8M_YEAST (Q03263) Hypothetical transport protein YMR279C|
          Length = 540

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 383 LLSAWYGLPFVSPNNILVTTINGAGSVIEAIYVVIF 490
           LL AWY +P   P NI   +++  GS +  I +++F
Sbjct: 246 LLMAWYSIPNNVPTNIHGLSMDWTGSALAIIGLILF 281

>COAT_TYLCA (P36278) Coat protein (CP)|
          Length = 256

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = -3

Query: 439 RHQDVVRGHERQPVPCG*EAVEQRHVVWHAGEVL 338
           R  DV RG E    PC  ++ EQRH V H G+VL
Sbjct: 60  RSPDVPRGCEG---PCKVQSYEQRHDVAHVGKVL 90

>FMN1B_MOUSE (Q05859) Formin-1 isoform IV (Limb deformity protein)|
          Length = 1206

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
 Frame = -3

Query: 418 GHERQPVPCG*EAVEQRHVVWHAGEVLRRLPLDDPPEGDHRRQEEEQSNN------IARD 257
           G+E  P      +V+   V+W  G ++      D  +GD   +EE   +       +  +
Sbjct: 119 GYELSPATV---SVDNEEVIWVRGTLVHTTSDSDSEDGDQEAEEESSLDTQKPTTVVLCE 175

Query: 256 PEEEPRD 236
           P +EP+D
Sbjct: 176 PSQEPKD 182

>EHMT1_HUMAN (Q9H9B1) Histone-lysine N-methyltransferase, H3 lysine-9 specific 5|
            (EC 2.1.1.43) (Histone H3-K9 methyltransferase 5)
            (H3-K9-HMTase 5) (Euchromatic histone-lysine
            N-methyltransferase 1) (Eu-HMTase1) (G9a-like protein 1)
            (GLP1)
          Length = 1267

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 475  DGLDHRPRAVDRR-HQDVVRGHERQPVPC 392
            D    RP  V+R   +D+ RG+ER P+PC
Sbjct: 966  DSAPDRPSPVERIVSRDIARGYERIPIPC 994

>DAL81_YEAST (P21657) Transcriptional activator protein DAL81 (Regulatory|
           protein UGA35)
          Length = 970

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -1

Query: 399 YHADRRQLSSVMLYGTPEKSSVDFLLMILQKVTTGDRKRNRAITL-PETPKKNLAICSIS 223
           YH+  + LS  M Y TP+K + +  L +    T     R     L P+TPK+ + +C  +
Sbjct: 595 YHSLPKNLS--MSYATPQKLNSNSTLTLAYFATEITLHRKIICALNPQTPKELVQVCRTA 652

Query: 222 AR 217
           AR
Sbjct: 653 AR 654

>DNAA_TREPA (O83047) Chromosomal replication initiator protein dnaA|
          Length = 464

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 93  LSSQRLGIQYRARQHGSCVYGC 28
           LS+  LGI++  R H + +YGC
Sbjct: 414 LSTTELGIEFGGRDHSTVIYGC 435

>CN100_HUMAN (Q9P055) Medulloblastoma antigen MU-MB-50.4|
          Length = 326

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = +2

Query: 350 GVPYNMTLLNCLLSAWYGLPFVSPNNILVTTINGAGSVIEAIYVVIFLIFA 502
           GV Y  +    +LS WY + + +P+   VTT++     +  +Y ++F+ +A
Sbjct: 128 GVLYIRSCRVLMLSDWYTMLY-NPSPDYVTTVHCTHEAVYPLYTIVFIYYA 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,890,569
Number of Sequences: 219361
Number of extensions: 1166747
Number of successful extensions: 4291
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4265
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)