ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2f24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MA121_DROME (P53624) Mannosyl-oligosaccharide alpha-1,2-mannosid... 88 2e-17
2MA122_DROME (P53625) Mannosyl-oligosaccharide alpha-1,2-mannosid... 88 2e-17
3MA1C1_HUMAN (Q9NR34) Mannosyl-oligosaccharide 1,2-alpha-mannosid... 82 2e-15
4MA1A1_PIG (O02773) Mannosyl-oligosaccharide 1,2-alpha-mannosidas... 81 3e-15
5MA1A2_MOUSE (P39098) Mannosyl-oligosaccharide 1,2-alpha-mannosid... 77 3e-14
6MA1A1_MOUSE (P45700) Mannosyl-oligosaccharide 1,2-alpha-mannosid... 77 4e-14
7MA1A2_HUMAN (O60476) Mannosyl-oligosaccharide 1,2-alpha-mannosid... 77 4e-14
8MA1A1_RABIT (P45701) Mannosyl-oligosaccharide 1,2-alpha-mannosid... 73 8e-13
9MA1A1_HUMAN (P33908) Mannosyl-oligosaccharide 1,2-alpha-mannosid... 72 1e-12
10MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosacchar... 68 3e-11
11EDEM3_HUMAN (Q9BZQ6) ER degradation-enhancing alpha-mannosidase-... 66 1e-10
12EDEM2_HUMAN (Q9BV94) ER degradation-enhancing alpha-mannosidase-... 64 3e-10
13YH04_YEAST (P38888) Protein YHR204W 57 5e-08
14EDEM1_MOUSE (Q925U4) ER degradation-enhancing alpha-mannosidase-... 56 1e-07
15EDEM1_HUMAN (Q92611) ER degradation-enhancing alpha-mannosidase-... 54 5e-07
16MNS1_CANAL (Q8J0Q0) Mannosyl-oligosaccharide 1,2-alpha-mannosida... 52 2e-06
17YKU1_SCHPO (Q9P7C3) Putative mannosyl-oligosaccharide 1,2-alpha-... 49 2e-05
18MNS1_YEAST (P32906) Endoplasmic reticulum mannosyl-oligosacchari... 46 1e-04
19MAN12_PENCI (P31723) Mannosyl-oligosaccharide alpha-1,2-mannosid... 45 2e-04
20KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen) 36 0.084
21KTN1_VULVU (O97961) Kinectin 34 0.42
22FLIDP_VIBPA (Q56705) Polar flagellar hook-associated protein 2 (... 33 0.55
23ASNA_MYCGA (Q7NAM0) Aspartate--ammonia ligase (EC 6.3.1.1) (Aspa... 32 2.1
24Y864_MYCCT (P43047) Hypothetical protein MCAP_0864 precursor (OR... 32 2.1
25NOG1_YEAST (Q02892) Nucleolar GTP-binding protein 1 31 2.7
26YIO4_YEAST (P40460) Hypothetical 80.5 kDa protein in SLN1-RAD25 ... 31 2.7
27RAD50_HUMAN (Q92878) DNA repair protein RAD50 (EC 3.6.-.-) (hRAD50) 31 2.7
28NOG1_ASHGO (Q74ZK6) Nucleolar GTP-binding protein 1 31 3.5
29YM74_YEAST (Q05024) Hypothetical 26.5 kDa protein in FUS2-RNH1 i... 31 3.5
30RAD50_MOUSE (P70388) DNA repair protein RAD50 (EC 3.6.-.-) (mRad50) 31 3.5
31Y1383_METJA (Q58778) Hypothetical protein MJ1383 precursor 30 4.6
32PWP1_MOUSE (Q99LL5) Periodic tryptophan protein 1 homolog 30 6.0
33Y577_METJA (Q57997) Protein MJ0577 30 6.0
34DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polype... 30 7.9
35TEA1_SCHPO (P87061) Tip elongation aberrant protein 1 (Cell pola... 30 7.9
36CGAT1_HUMAN (Q8TDX6) Chondroitin beta-1,4-N-acetylgalactosaminyl... 30 7.9
37NOG1_CANGA (Q6FRV0) Nucleolar GTP-binding protein 1 30 7.9
38DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polype... 30 7.9
39DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypept... 30 7.9
40DYNA_XENLA (Q6PCJ1) Dynactin-1 30 7.9
41RAD50_RAT (Q9JIL8) DNA repair protein RAD50 (EC 3.6.-.-) 30 7.9
42FGL2_HUMAN (Q14314) Fibroleukin precursor (Fibrinogen-like prote... 30 7.9

>MA121_DROME (P53624) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 1|
           (EC 3.2.1.113) (Man(9)-alpha-mannosidase)
          Length = 667

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 46/65 (70%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
 Frame = +2

Query: 452 AFEKNSRIASGYVGLRDVNSGE--KDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625
           A EK+ R A GY GLR+V   E  KDD  QSFFLAETLKYLYLLFS  SV+  DEWVFNT
Sbjct: 581 ALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNT 640

Query: 626 EAHPL 640
           EAHPL
Sbjct: 641 EAHPL 645



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>MA122_DROME (P53625) Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform 2|
           (EC 3.2.1.113) (Man(9)-alpha-mannosidase)
          Length = 643

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 46/65 (70%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
 Frame = +2

Query: 452 AFEKNSRIASGYVGLRDVNSGE--KDDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625
           A EK+ R A GY GLR+V   E  KDD  QSFFLAETLKYLYLLFS  SV+  DEWVFNT
Sbjct: 557 ALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNT 616

Query: 626 EAHPL 640
           EAHPL
Sbjct: 617 EAHPL 621



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>MA1C1_HUMAN (Q9NR34) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC (EC|
           3.2.1.113) (Processing alpha-1,2-mannosidase IC)
           (Alpha-1,2-mannosidase IC) (Mannosidase alpha class 1C
           member 1) (HMIC)
          Length = 630

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
 Frame = +2

Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVNSG--EKDDKMQSFFLAETLKYLYLLFSP 586
           +PI  E   +V  A EK  R  +G+ G++DV S     D+K QSFFLAETLKYLYLLFS 
Sbjct: 538 NPIYREWGWEVVLALEKYCRTEAGFSGIQDVYSSTPNHDNKQQSFFLAETLKYLYLLFSE 597

Query: 587 PSVVSFDEWVFNTEAHPL 640
             ++S ++WVFNTEAHPL
Sbjct: 598 DDLLSLEDWVFNTEAHPL 615



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>MA1A1_PIG (O02773) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC|
           3.2.1.113) (Processing alpha-1,2-mannosidase IA)
           (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A
           member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase)
          Length = 659

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
 Frame = +2

Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDV--NSGEKDDKMQSFFLAETLKYLYLLFSP 586
           DP   +   +  EA EK+ R+  GY GLRDV  ++   DD  QSFFLAETLKYLYL+FS 
Sbjct: 567 DPKYRKWAWEAVEALEKHCRVNGGYSGLRDVYVSAQTYDDVQQSFFLAETLKYLYLIFSD 626

Query: 587 PSVVSFDEWVFNTEAHPL 640
             ++  + W+FNTEAHPL
Sbjct: 627 DDLLPLEHWIFNTEAHPL 644



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>MA1A2_MOUSE (P39098) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC|
           3.2.1.113) (Processing alpha-1,2-mannosidase IB)
           (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A
           member 2)
          Length = 641

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
 Frame = +2

Query: 452 AFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625
           A EK+ R++ G+ G++DV +     DD  QSFFLAETLKYLYLLFS   ++  D WVFNT
Sbjct: 560 AIEKSCRVSGGFSGVKDVYAPTPVHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVFNT 619

Query: 626 EAHPL 640
           EAHPL
Sbjct: 620 EAHPL 624



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>MA1A1_MOUSE (P45700) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC|
           3.2.1.113) (Processing alpha-1,2-mannosidase IA)
           (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A
           member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase)
          Length = 655

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = +2

Query: 449 EAFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFN 622
           EA E + R+  GY GLRDV    +  DD  QSFFLAETLKYLYL+FS   ++  + W+FN
Sbjct: 575 EALESHCRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHWIFN 634

Query: 623 TEAHP 637
           TEAHP
Sbjct: 635 TEAHP 639



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>MA1A2_HUMAN (O60476) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC|
           3.2.1.113) (Processing alpha-1,2-mannosidase IB)
           (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A
           member 2)
          Length = 641

 Score = 77.0 bits (188), Expect = 4e-14
 Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = +2

Query: 452 AFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625
           A EK  R+  G+ G++DV S     DD  QSFFLAETLKYLYLLFS   ++  D WVFNT
Sbjct: 560 AIEKYCRVNGGFSGVKDVYSSTPTHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVFNT 619

Query: 626 EAHPL 640
           EAHPL
Sbjct: 620 EAHPL 624



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>MA1A1_RABIT (P45701) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC|
           3.2.1.113) (Processing alpha-1,2-mannosidase IA)
           (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A
           member 1) (Man(9)-alpha-mannosidase) (Fragment)
          Length = 469

 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
 Frame = +2

Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVN-SGEK-DDKMQSFFLAETLKYLYLLFSP 586
           DP   +   +  EA E + R+  GY GLRDV  + EK D+  QSFFLAETLKYLYL+FS 
Sbjct: 377 DPKYRKWAWEAVEALESHCRVNGGYSGLRDVYFTHEKYDNVQQSFFLAETLKYLYLIFSD 436

Query: 587 PSVVSFDEWVFNTEAHPL 640
             ++  + W+FNTEAH L
Sbjct: 437 DDLLPLEHWIFNTEAHLL 454



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>MA1A1_HUMAN (P33908) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC|
           3.2.1.113) (Processing alpha-1,2-mannosidase IA)
           (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A
           member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase)
          Length = 653

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = +2

Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVNSGEK--DDKMQSFFLAETLKYLYLLFSP 586
           DP   +   +  EA E + R+  GY GLRDV    +  DD  QSFFLAETLKYLYL+FS 
Sbjct: 561 DPKYRKWAWEAVEALENHCRVNGGYSGLRDVYLLHESYDDVQQSFFLAETLKYLYLIFSD 620

Query: 587 PSVVSFDEWVFNTEAHPL 640
             ++  + W+FN+EAH L
Sbjct: 621 DDLLPLEHWIFNSEAHLL 638



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>MA1B1_HUMAN (Q9UKM7) Endoplasmic reticulum mannosyl-oligosaccharide|
           1,2-alpha-mannosidase (EC 3.2.1.113) (ER
           alpha-1,2-mannosidase) (Mannosidase alpha class 1B
           member 1) (Man9GlcNAc2-specific-processing
           alpha-mannosidase)
          Length = 699

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 5/72 (6%)
 Frame = +2

Query: 440 KVKEAFEKNSRIASG-YVGLRDVNSGEKD---DKMQSFFLAETLKYLYLLFS-PPSVVSF 604
           ++ ++F + +R+ SG Y  + +V   +K    DKM+SFFL ETLKYL+LLFS  P+++S 
Sbjct: 622 EILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGETLKYLFLLFSDDPNLLSL 681

Query: 605 DEWVFNTEAHPL 640
           D +VFNTEAHPL
Sbjct: 682 DAYVFNTEAHPL 693



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>EDEM3_HUMAN (Q9BZQ6) ER degradation-enhancing alpha-mannosidase-like 3|
          Length = 889

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = +2

Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPS 592
           DP   E  + + E   K +R+  G+  ++DV +G  +D+M SFFLAE  KYLYLLF+   
Sbjct: 376 DPYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKE 435

Query: 593 VVSFD--EWVFNTEAHPL 640
            + FD  +++F TEAH L
Sbjct: 436 DIIFDIEDYIFTTEAHLL 453



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>EDEM2_HUMAN (Q9BV94) ER degradation-enhancing alpha-mannosidase-like 2|
           precursor
          Length = 578

 Score = 64.3 bits (155), Expect = 3e-10
 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 19/95 (20%)
 Frame = +2

Query: 413 DPINNERREKVKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPS 592
           DP   E      E+ EK S++  G+  ++D+   + D++M+SFFLAET+KYLYLLF P +
Sbjct: 386 DPTLLELGRDAVESIEKISKVECGFATIKDLRDHKLDNRMESFFLAETVKYLYLLFDPTN 445

Query: 593 VV-----SFDE--------------WVFNTEAHPL 640
            +     +FD               ++FNTEAHP+
Sbjct: 446 FIHNNGSTFDAVITPYGECILGAGGYIFNTEAHPI 480



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>YH04_YEAST (P38888) Protein YHR204W|
          Length = 796

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
 Frame = +2

Query: 443 VKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 616
           +K+ F+ N     G+ G ++V +GE  D+M++F L+ETLKYLYLLF   + +  S  + +
Sbjct: 437 LKQRFKSNC----GFAGFQNVITGELQDRMETFVLSETLKYLYLLFDEENELHNSASDVI 492

Query: 617 FNTEAHPL 640
           F+TEAHP+
Sbjct: 493 FSTEAHPM 500



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>EDEM1_MOUSE (Q925U4) ER degradation-enhancing alpha-mannosidase-like 1|
          Length = 652

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
 Frame = +2

Query: 443 VKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 616
           + ++ EK +++  GY  L  V    K+D+M+SFFL+ET KYLYLLF   + V  S   ++
Sbjct: 512 ILQSLEKYTKVKCGYATLHHVIDKSKEDRMESFFLSETCKYLYLLFDEENPVHKSGTRYM 571

Query: 617 FNTEAH 634
           F TE H
Sbjct: 572 FTTEGH 577



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>EDEM1_HUMAN (Q92611) ER degradation-enhancing alpha-mannosidase-like 1|
          Length = 657

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +2

Query: 443 VKEAFEKNSRIASGYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSPPSVV--SFDEWV 616
           + ++ EK +++  GY  L  V     +D+M+SFFL+ET KYLYLLF   + V  S   ++
Sbjct: 517 ILQSLEKYTKVKCGYATLHHVIDKSTEDRMESFFLSETCKYLYLLFDEDNPVHKSGTRYM 576

Query: 617 FNTEAH 634
           F TE H
Sbjct: 577 FTTEGH 582



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>MNS1_CANAL (Q8J0Q0) Mannosyl-oligosaccharide 1,2-alpha-mannosidase (EC|
           3.2.1.113) (Man(9)-alpha-mannosidase)
          Length = 565

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
 Frame = +2

Query: 464 NSRIASGYVGLRDVNSGEKD------DKMQSFFLAETLKYLYLLFSPPSVVSFDEWVFNT 625
           NS     +  L DV S + +      D  +SF+ AETLKYLYLLF   + +   ++VFNT
Sbjct: 442 NSEGEVSFSSLSDVTSFDSNGLPKFKDNTESFWWAETLKYLYLLFDDTNKIPLTDYVFNT 501

Query: 626 EAHP 637
           EAHP
Sbjct: 502 EAHP 505



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>YKU1_SCHPO (Q9P7C3) Putative mannosyl-oligosaccharide 1,2-alpha-mannosidase|
           (EC 3.2.1.113) (Man(9)-alpha-mannosidase)
          Length = 521

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
 Frame = +2

Query: 515 EKDDKMQSFFLAETLKYLYLLFSPP-SVVSFDEWVFNTEAHP 637
           ++ DK +SF+ AETLKYLYLLF    S++    + FNTEAHP
Sbjct: 467 DQRDKTESFWFAETLKYLYLLFEDDFSILPLTNYTFNTEAHP 508



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>MNS1_YEAST (P32906) Endoplasmic reticulum mannosyl-oligosaccharide|
           1,2-alpha-mannosidase (EC 3.2.1.113) (ER
           alpha-1,2-mannosidase) (Man(9)-alpha-mannosidase)
          Length = 549

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
 Frame = +2

Query: 515 EKDDKMQSFFLAETLKYLYLLFSPPSVVSFD--EWVFNTEAHP 637
           +K + M+SF+LAETLKYLY+LF    +  FD  + VFNTEAHP
Sbjct: 491 KKSNNMESFWLAETLKYLYILF----LDEFDLTKVVFNTEAHP 529



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>MAN12_PENCI (P31723) Mannosyl-oligosaccharide alpha-1,2-mannosidase precursor|
           (EC 3.2.1.113) (Man(9)-alpha-mannosidase)
          Length = 511

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
 Frame = +2

Query: 452 AFEKNSRIASGYVGLRDVNS---GEKDDKMQSFFLAETLKYLYLLFSPPSVVSFDE---- 610
           A     R  SG+  + DVN    G K D  +SF  AE +KY YL  S  +     +    
Sbjct: 436 AINSTCRTDSGFAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHSEDAAWQVQKGGKN 495

Query: 611 -WVFNTEAHPL 640
            +V+NTEAHP+
Sbjct: 496 TFVYNTEAHPI 506



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>KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen)|
          Length = 1357

 Score = 36.2 bits (82), Expect = 0.084
 Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
 Frame = +2

Query: 275  LVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEID-PINNERREKVKE 451
            ++SE E EIS L NE++ L                     KD VE     NN+ REK  E
Sbjct: 1000 VISEREKEISGLWNELDSL---------------------KDAVEHQRKKNNDLREKNWE 1038

Query: 452  AFEKNSRIASGYVGLRD-VNSGEKDDKMQ----SFFLAETLKYLYLLFSPPSVVSFDEWV 616
            A E    +AS    L+D VN   K+ + Q         E LK L+   S PS +S+ EW+
Sbjct: 1039 AME---ALASTEKMLQDKVNKTSKERQQQVEAVELEAKEVLKKLFPKVSVPSNLSYGEWL 1095

Query: 617  FNTE 628
               E
Sbjct: 1096 HGFE 1099



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>KTN1_VULVU (O97961) Kinectin|
          Length = 1330

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
 Frame = +2

Query: 275  LVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEA 454
            ++SE E EI+ L+NE++ L               A+   RK        NN+ REK  EA
Sbjct: 1000 VISEREKEITGLQNELDSL-------------KEAVEHQRKK-------NNDLREKNWEA 1039

Query: 455  FEKNSRIASGYVGLRD-VNSGEKDDKMQ-----SFFLAETLKYLYLLFSPPSVVSFDEWV 616
             E    +AS    L+D VN   K ++ Q          E LK L+   S P  +++ EW+
Sbjct: 1040 ME---ALASTEKMLQDKVNKTSKVERQQYVEAIELEAKEVLKKLFPKVSVPPNLNYGEWL 1096

Query: 617  FNTEAHP 637
               E  P
Sbjct: 1097 RGFEKKP 1103



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>FLIDP_VIBPA (Q56705) Polar flagellar hook-associated protein 2 (HAP2) (Filament|
           cap protein) (Flagellar cap protein)
          Length = 670

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
 Frame = +2

Query: 263 DRQSLVSEYESEISQ-LKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERRE 439
           + + L+ + ++EI Q + +E  +L  ++ +   +L E  A  I R    ++DP   ER E
Sbjct: 353 EAKQLLEQEKAEIEQKIADEKQELDAKVERG--ELSEEQAKQIHR---AKLDPQERERLE 407

Query: 440 KVKEAFEKNSRIASG---YVGLRDVNSGEKDD 526
           K+ EA  K ++  S    Y+G+ +V +G+  +
Sbjct: 408 KIDEAEAKIAKAQSSFEEYLGMTEVQAGQDSE 439



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>ASNA_MYCGA (Q7NAM0) Aspartate--ammonia ligase (EC 6.3.1.1) (Asparagine|
           synthetase A)
          Length = 329

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 15/49 (30%), Positives = 30/49 (61%)
 Frame = +2

Query: 260 WDRQSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLV 406
           WD +  +SE +  +  LKN +N+++  L++A +++ E   I   +KDL+
Sbjct: 118 WDWELRISENDRNVEFLKNTVNKIYKVLKEAQLKVNEKYGI-FEQKDLL 165



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>Y864_MYCCT (P43047) Hypothetical protein MCAP_0864 precursor (ORF R8)|
          Length = 470

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
 Frame = +2

Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVK 448
           Q+ +   E ++  + N+IN    +L+   ++ E+N    I  KD  +I+ +  E+R+ VK
Sbjct: 38  QNEIKRIEKQLKSINNDINIKENELKSLLLEDEKNL---ISSKD--KINKLKQEQRDLVK 92

Query: 449 EAFEKN---SRIASGYVGLRDVNSGEKDDK 529
           + F++    S++      L+  +  +KD K
Sbjct: 93  KDFDQKQMISKLTKDLTNLKLESETKKDQK 122



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>NOG1_YEAST (Q02892) Nucleolar GTP-binding protein 1|
          Length = 647

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
 Frame = +2

Query: 275 LVSEYESEI---SQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKV 445
           L S  E+++   S++ N +N++H    +A   ++  P I    K+L + DP +  RR+  
Sbjct: 340 LASRIENKLKSQSRINNVLNKIHVAQPQARDDVKRTPFIPESVKNLKKYDPEDPNRRKLA 399

Query: 446 KEAFEKNSRIASGYVGLRDVNSGEK----DDKMQSFFLAETL--KYLYLLFSP 586
           ++   +N     G  G+ +VN  +K    DD+ ++  + E L  K +Y    P
Sbjct: 400 RDIEAEN-----GGAGVFNVNLKDKYLLEDDEWKNDIMPEILDGKNVYDFLDP 447



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>YIO4_YEAST (P40460) Hypothetical 80.5 kDa protein in SLN1-RAD25 intergenic|
           region
          Length = 691

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLV-EIDPIN 424
           E EI  L++ I++LH  LRK GI  E+       R+ L  E+D IN
Sbjct: 389 EEEIKALQSNISELHKILRKKGISTEQFELQNQEREKLTRELDKIN 434



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>RAD50_HUMAN (Q92878) DNA repair protein RAD50 (EC 3.6.-.-) (hRAD50)|
          Length = 1312

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 19/64 (29%), Positives = 35/64 (54%)
 Frame = +2

Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVK 448
           + +V  YE+E+  LKN + ++   L K  ++L+        RK  +E D  N+E  EK++
Sbjct: 238 KEIVKSYENELDPLKNRLKEIEHNLSKI-MKLDNEIKALDSRKKQMEKD--NSELEEKME 294

Query: 449 EAFE 460
           + F+
Sbjct: 295 KVFQ 298



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>NOG1_ASHGO (Q74ZK6) Nucleolar GTP-binding protein 1|
          Length = 642

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 21/79 (26%), Positives = 38/79 (48%)
 Frame = +2

Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469
           ++ I+ + N+I+  H Q R  G+  E  P I    K++ + DP + ERR   ++   +N 
Sbjct: 351 QTRITNVLNKIHVAHPQKRDDGV--ERTPYIPEAFKNVKKYDPEDPERRPLARDIEAENG 408

Query: 470 RIASGYVGLRDVNSGEKDD 526
                 + L+D    E D+
Sbjct: 409 GAGVFNINLKDSYLLENDE 427



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>YM74_YEAST (Q05024) Hypothetical 26.5 kDa protein in FUS2-RNH1 intergenic|
           region
          Length = 226

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 24/91 (26%), Positives = 44/91 (48%)
 Frame = +2

Query: 266 RQSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKV 445
           R++L   Y   +   +  IN+L   L + G  ++ENP + IP+ DL+  D   + R +K 
Sbjct: 29  RKALQILYSVNLDSQRKLINELI--LERFG-DIQENPRVLIPKNDLISRDQELSLRLQKE 85

Query: 446 KEAFEKNSRIASGYVGLRDVNSGEKDDKMQS 538
           +E   +++R   G    +     +K+D   S
Sbjct: 86  EERPLRSTRKRKGKSESKSKRKKKKNDSPDS 116



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>RAD50_MOUSE (P70388) DNA repair protein RAD50 (EC 3.6.-.-) (mRad50)|
          Length = 1312

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = +2

Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVK 448
           Q +V  YE E+  LKN + ++   L K  ++L+        RK  +E D  N+E  +K++
Sbjct: 238 QEIVRSYEDELEPLKNRLKEIEHNLSKI-MKLDNEIKALESRKKQMEKD--NSELEQKME 294

Query: 449 EAFE 460
           + F+
Sbjct: 295 KVFQ 298



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>Y1383_METJA (Q58778) Hypothetical protein MJ1383 precursor|
          Length = 256

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
 Frame = +2

Query: 278 VSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGI-PRKDLVEIDPINNERREKVKEA 454
           +  +E+ + +L   IN+L  + +K G+ L     +G+ PR    EID    E  +K+K  
Sbjct: 39  IKVWEAHVEKLL--INELE-RAKKVGLNLFI--CVGMHPRAIPPEID----EALDKIKSY 89

Query: 455 FEKNSRIAS-GYVGLRDVNSGEKDDKMQSFFLAETLKYLYLLFSP 586
              NSR+   G +GL      EK+  ++   LAE L    ++ +P
Sbjct: 90  INYNSRVVGIGEIGLEKATKEEKEVFIKQLLLAEELNMPAVVHTP 134



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>PWP1_MOUSE (Q99LL5) Periodic tryptophan protein 1 homolog|
          Length = 501

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
 Frame = +2

Query: 260 WDRQSLVSEYESEISQLKNEINQL----HGQLRKAGIQLEENPAIGIPRKDLVEIDPINN 427
           W R+ +  E   ++   K E+N+L     G+L++ G   EE    G P +D ++  P   
Sbjct: 12  WVRRGVAKETPDKVELSKEEVNRLIAEAKGKLQEEGGSEEEE--AGNPSEDGMQSGPTQA 69

Query: 428 ERREKVKEAFEKNSRI-----ASGYVGLRDVNSGEKDDKMQSFFLAETL 559
             RE +++   ++ R       +GY    D+++ +++D   +  + E+L
Sbjct: 70  PPRESLEDGDPQDDRTLDDDELAGY----DLDNYDEEDNPDAETIGESL 114



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>Y577_METJA (Q57997) Protein MJ0577|
          Length = 162

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
 Frame = +2

Query: 278 VSEYESEIS-----QLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEI 412
           V E+E+E+      + KN++  +  +L   G ++++   +GIP +++V+I
Sbjct: 66  VEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKI 115



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>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1281

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/82 (21%), Positives = 38/82 (46%)
 Frame = +2

Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469
           + E+  LK  +++L   L     ++EE  + G                  ++K+  E+N+
Sbjct: 322 QQEVEALKERVDELTTDLEILKAEIEEKGSDGAASS-------------YQLKQLEEQNA 368

Query: 470 RIASGYVGLRDVNSGEKDDKMQ 535
           R+    V +RD++S EK + ++
Sbjct: 369 RLKDALVRMRDLSSSEKQEHVK 390



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>TEA1_SCHPO (P87061) Tip elongation aberrant protein 1 (Cell polarity protein|
            tea1)
          Length = 1147

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +2

Query: 314  NEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDP-INNERREKVKEAFEKNSRIASGYV 490
            NEI  LH Q+R    +LE+       R+ L+     I +  R +++EA EK S +     
Sbjct: 881  NEIELLHDQIRITNAKLEK-------REKLINASKYIEDTLRSEIQEAAEKVSNLEFSNF 933

Query: 491  GLRDVNS 511
             L++ NS
Sbjct: 934  NLKEENS 940



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>CGAT1_HUMAN (Q8TDX6) Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 1|
           (EC 2.4.1.174) (beta4GalNAcT-1)
          Length = 532

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +2

Query: 260 WDRQ--SLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPR 394
           W+ Q  + VS  + +I+QLK E+ +   QLR    Q  +   +G+ R
Sbjct: 64  WEEQHRNYVSSLKRQIAQLKEELQERSEQLRNGQYQASDAAGLGLDR 110



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>NOG1_CANGA (Q6FRV0) Nucleolar GTP-binding protein 1|
          Length = 645

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
 Frame = +2

Query: 275 LVSEYESEI---SQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKV 445
           L S  E+++   +++ N +N++H    +A   +E  P I    K L + DP + ERR   
Sbjct: 340 LASRIENKLKSQARITNVLNKIHVAKPQARDDVERTPYIPEEFKKLKKYDPEDPERRLLA 399

Query: 446 KEAFEKNSRIASGYVGLRDVNSGEK----DDKMQSFFLAETL--KYLYLLFSP 586
           ++   +N     G  G+ ++N  +K    DD+ ++  + E +  K +Y    P
Sbjct: 400 RDIEAEN-----GGAGVFNINLKDKYILDDDEWKNDIMPEIMDGKNVYDFLDP 447



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>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued) (p135)
          Length = 1278

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/82 (21%), Positives = 38/82 (46%)
 Frame = +2

Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469
           + E+  LK  +++L   L     ++EE  + G                  ++K+  E+N+
Sbjct: 322 QQEVEALKERVDELTTDLEILKAEIEEKGSDGAASS-------------YQLKQLEEQNA 368

Query: 470 RIASGYVGLRDVNSGEKDDKMQ 535
           R+    V +RD++S EK + ++
Sbjct: 369 RLKDALVRMRDLSSSEKQEHVK 390



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>DYNA_RAT (P28023) Dynactin-1 (150 kDa dynein-associated polypeptide)|
           (DP-150) (DAP-150) (p150-glued)
          Length = 1280

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/82 (21%), Positives = 38/82 (46%)
 Frame = +2

Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469
           + E+  LK  +++L   L     ++EE  + G                  ++K+  E+N+
Sbjct: 321 QQEVEALKERVDELTTDLEILKAEIEEKGSDGAASS-------------YQLKQLEEQNA 367

Query: 470 RIASGYVGLRDVNSGEKDDKMQ 535
           R+    V +RD++S EK + ++
Sbjct: 368 RLKDALVRMRDLSSSEKQEHVK 389



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>DYNA_XENLA (Q6PCJ1) Dynactin-1|
          Length = 1232

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/82 (23%), Positives = 40/82 (48%)
 Frame = +2

Query: 290 ESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVKEAFEKNS 469
           E     L+ E++ L  ++ +  I LE      I + ++ E          +VK+  E+N+
Sbjct: 273 EERAESLQQEVDTLKDKVEEHKIDLE------ILKHEIEEKGSDGAASSYQVKQLEEQNA 326

Query: 470 RIASGYVGLRDVNSGEKDDKMQ 535
           R+    V +RD+++ EK + ++
Sbjct: 327 RLKEALVRMRDLSASEKQEHIK 348



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>RAD50_RAT (Q9JIL8) DNA repair protein RAD50 (EC 3.6.-.-)|
          Length = 1312

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/64 (28%), Positives = 35/64 (54%)
 Frame = +2

Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGIQLEENPAIGIPRKDLVEIDPINNERREKVK 448
           + +V  YE+E+  LKN + ++   L K  ++L+        RK  +E D  N+E  +K++
Sbjct: 238 REIVKAYENELEPLKNRLKEIEHNLSKI-MRLDNEIKALDSRKKQMEKD--NSELEQKME 294

Query: 449 EAFE 460
           + F+
Sbjct: 295 KVFQ 298



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>FGL2_HUMAN (Q14314) Fibroleukin precursor (Fibrinogen-like protein 2) (pT49)|
          Length = 439

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +2

Query: 269 QSLVSEYESEISQLKNEINQLHGQLRKAGI 358
           +S V++  SE+   K EIN LHG+L K  +
Sbjct: 134 ESEVNKLSSELKNAKEEINVLHGRLEKLNL 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,148,035
Number of Sequences: 219361
Number of extensions: 972801
Number of successful extensions: 3412
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 3340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3399
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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