>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0074L11, complete sequence
          Length = 180703

 Score =  117 bits (59), Expect = 1e-23
 Identities = 135/160 (84%), Gaps = 1/160 (0%)
 Strand = Plus / Minus

                                                                         
Query: 4     gggtattaacacactcctctcactggnggagacttatgctgacttcaccccagttaggat 63
             |||||| ||||| || |||||||| | |||||| ||||||||| ||||||||||||||||
Sbjct: 61908 gggtatcaacacgcttctctcactcgaggagacgtatgctgacatcaccccagttaggat 61849

                                                                         
Query: 64    ttctgacaattcggttacggcgttcgtgtcagttatgaggggttgtaacaaatatgngct 123
              ||||||||||| || || || || || ||| ||||||||||||| ||| |||||| |||
Sbjct: 61848 ctctgacaattcagtgaccgcatttgtatcaattatgaggggttgcaac-aatatgtgct 61790

                                                     
Query: 124   cgttttgcattgntcccttcactagaggcagggagaggtc 163
             | ||||| || | ||| ||||||||||| ||||| |||||
Sbjct: 61789 ccttttgtatcgttcctttcactagaggtagggaaaggtc 61750

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  117 bits (59), Expect = 1e-23
 Identities = 135/160 (84%), Gaps = 1/160 (0%)
 Strand = Plus / Minus

                                                                            
Query: 4        gggtattaacacactcctctcactggnggagacttatgctgacttcaccccagttaggat 63
                |||||| ||||| || |||||||| | |||||| ||||||||| ||||||||||||||||
Sbjct: 21709855 gggtatcaacacgcttctctcactcgaggagacgtatgctgacatcaccccagttaggat 21709796

                                                                            
Query: 64       ttctgacaattcggttacggcgttcgtgtcagttatgaggggttgtaacaaatatgngct 123
                 ||||||||||| || || || || || ||| ||||||||||||| ||| |||||| |||
Sbjct: 21709795 ctctgacaattcagtgaccgcatttgtatcaattatgaggggttgcaac-aatatgtgct 21709737

                                                        
Query: 124      cgttttgcattgntcccttcactagaggcagggagaggtc 163
                | ||||| || | ||| ||||||||||| ||||| |||||
Sbjct: 21709736 ccttttgtatcgttcctttcactagaggtagggaaaggtc 21709697

>dbj|AK066319.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067A17, full
           insert sequence
          Length = 2156

 Score =  117 bits (59), Expect = 1e-23
 Identities = 135/160 (84%), Gaps = 1/160 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gggtattaacacactcctctcactggnggagacttatgctgacttcaccccagttaggat 63
           |||||| ||||| || |||||||| | |||||| ||||||||| ||||||||||||||||
Sbjct: 685 gggtatcaacacgcttctctcactcgaggagacgtatgctgacatcaccccagttaggat 744

                                                                       
Query: 64  ttctgacaattcggttacggcgttcgtgtcagttatgaggggttgtaacaaatatgngct 123
            ||||||||||| || || || || || ||| ||||||||||||| ||| |||||| |||
Sbjct: 745 ctctgacaattcagtgaccgcatttgtatcaattatgaggggttgcaac-aatatgtgct 803

                                                   
Query: 124 cgttttgcattgntcccttcactagaggcagggagaggtc 163
           | ||||| || | ||| ||||||||||| ||||| |||||
Sbjct: 804 ccttttgtatcgttcctttcactagaggtagggaaaggtc 843

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  117 bits (59), Expect = 1e-23
 Identities = 135/160 (84%), Gaps = 1/160 (0%)
 Strand = Plus / Minus

                                                                            
Query: 4        gggtattaacacactcctctcactggnggagacttatgctgacttcaccccagttaggat 63
                |||||| ||||| || |||||||| | |||||| ||||||||| ||||||||||||||||
Sbjct: 22020054 gggtatcaacacgcttctctcactcgaggagacgtatgctgacatcaccccagttaggat 22019995

                                                                            
Query: 64       ttctgacaattcggttacggcgttcgtgtcagttatgaggggttgtaacaaatatgngct 123
                 ||||||||||| || || || || || ||| ||||||||||||| ||| |||||| |||
Sbjct: 22019994 ctctgacaattcagtgaccgcatttgtatcaattatgaggggttgcaac-aatatgtgct 22019936

                                                        
Query: 124      cgttttgcattgntcccttcactagaggcagggagaggtc 163
                | ||||| || | ||| ||||||||||| ||||| |||||
Sbjct: 22019935 ccttttgtatcgttcctttcactagaggtagggaaaggtc 22019896

>dbj|AP006712.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT17E09, TM0627,
             complete sequence
          Length = 101220

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 59/69 (85%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                         
Query: 98    atgaggggttgtaacaaatatgngctcgttttgcattgntcccttcactagaggcaggga 157
             ||||||||||| ||||| |||| |||| ||||| ||||  || |||||||||||||| ||
Sbjct: 84981 atgaggggttgcaacaa-tatgtgctcattttgtattgtacctttcactagaggcagaga 84923

                      
Query: 158   gaggtcacg 166
             | |||||||
Sbjct: 84922 gcggtcacg 84914

>dbj|AB120535.2| Nicotiana tabacum NtCAPL mRNA, complete cds
          Length = 2160

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 114 aatatgngctcgttttgcattgntcccttcactagagg 151
           |||||| |||| || ||||||| |||||||||||||||
Sbjct: 906 aatatgtgctcattctgcattgttcccttcactagagg 943

>gb|BT013845.1| Lycopersicon esculentum clone 132802F, mRNA sequence
          Length = 2181

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 129 tgcattgntcccttcactagagg 151
           ||||||| |||||||||||||||
Sbjct: 921 tgcattgttcccttcactagagg 943

>emb|AL031717.11|HS361A3 Human DNA sequence from clone LA16c-361A3 on chromosome 16 Contains
             part of gene simliar to murine JNK/SAPK-associated
             protein-1, STSs, GSSs and CpG islands, complete sequence
          Length = 43288

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 151   gcagggagaggtcacggccc 170
             ||||||||||||||||||||
Sbjct: 40651 gcagggagaggtcacggccc 40632

>gb|AC012180.6| Homo sapiens chromosome 16 clone RP11-31I10, complete sequence
          Length = 69437

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 151 gcagggagaggtcacggccc 170
           ||||||||||||||||||||
Sbjct: 165 gcagggagaggtcacggccc 146

>gb|AE006639.1| Homo sapiens 16p13.3 sequence section 7 of 8
          Length = 270150

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gcagggagaggtcacggccc 170
              ||||||||||||||||||||
Sbjct: 154541 gcagggagaggtcacggccc 154522

>gb|AC159225.4| Mus musculus chromosome 1, clone RP24-306F17, complete sequence
          Length = 168805

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 56    gttaggatttctgacaatt 74
             |||||||||||||||||||
Sbjct: 71500 gttaggatttctgacaatt 71482

>gb|AC112521.4| Mus musculus BAC clone RP23-186C6 from 9, complete sequence
          Length = 230334

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 147    agaggcagggagaggtcac 165
              |||||||||||||||||||
Sbjct: 188392 agaggcagggagaggtcac 188374

>gb|AC102568.8| Mus musculus chromosome 1, clone RP23-224O10, complete sequence
          Length = 239053

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 56    gttaggatttctgacaatt 74
             |||||||||||||||||||
Sbjct: 33405 gttaggatttctgacaatt 33423

>gb|AC073048.7| Homo sapiens BAC clone RP11-54E21 from 7, complete sequence
          Length = 166183

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 142   tcactagaggcagggagag 160
             |||||||||||||||||||
Sbjct: 52923 tcactagaggcagggagag 52941

>ref|XM_845253.1| PREDICTED: Canis familiaris hypothetical protein LOC608278
           (LOC608278), mRNA
          Length = 1179

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 151 gcagggagaggtcacggcc 169
           |||||||||||||||||||
Sbjct: 844 gcagggagaggtcacggcc 862

>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 219585

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    gtgtcagttatgaggggtt 107
             |||||||||||||||||||
Sbjct: 93459 gtgtcagttatgaggggtt 93441

>emb|AL356157.14| Human DNA sequence from clone RP11-733D4 on chromosome 10 Contains part
              of a novel gene, complete sequence
          Length = 198917

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 146    tagaggcagggagaggtca 164
              |||||||||||||||||||
Sbjct: 164700 tagaggcagggagaggtca 164718

>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the
              3' end of the OPRL1 gene for opiate receptor-like 1
              protein, the GPR8 gene encoding a G protein-coupled
              receptor, the KIAA0835 gene encoding a protein similar to
              the myelin transcription factor 1 (MYT1), a novel gene, 7
              CpG islands, ESTs, STSs and GSSs, complete sequence
          Length = 179888

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 144    actagaggcagggagaggt 162
              |||||||||||||||||||
Sbjct: 108454 actagaggcagggagaggt 108472

>gb|AC018517.7| Homo sapiens, clone RP11-115N12, complete sequence
          Length = 180917

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 45    acttcaccccagttaggat 63
             |||||||||||||||||||
Sbjct: 78719 acttcaccccagttaggat 78701

>gb|AC155637.4| Mus musculus 10 BAC RP24-227O16 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 159189

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 89   gtgtcagttatgaggggtt 107
            |||||||||||||||||||
Sbjct: 3925 gtgtcagttatgaggggtt 3943

>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 38      tatgctgacttcaccccag 56
               |||||||||||||||||||
Sbjct: 2111252 tatgctgacttcaccccag 2111270

>pdb|486D|F Chain F, X-Ray Crystal Structures Of 70s Ribosome Functional
          Complexes
          Length = 85

 Score = 38.2 bits (19), Expect = 8.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 44 gacttcaccccagttagga 62
          |||||||||||||||||||
Sbjct: 84 gacttcaccccagttagga 66


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 948,116
Number of Sequences: 3902068
Number of extensions: 948116
Number of successful extensions: 87778
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87673
Number of HSP's gapped (non-prelim): 100
length of query: 177
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 155
effective length of database: 17,147,199,772
effective search space: 2657815964660
effective search space used: 2657815964660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)