>gb|AC183989.2| Pan troglodytes BAC clone CH251-207E6 from chromosome 2, complete
             sequence
          Length = 163596

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 41    gtctgtccatctgcctctgtc 61
             |||||||||||||||||||||
Sbjct: 55990 gtctgtccatctgcctctgtc 55970

>gb|AC113483.7| Mus musculus chromosome 1, clone RP23-343E12, complete sequence
          Length = 207188

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    tctgtccatctgcctctgtct 62
             |||||||||||||||||||||
Sbjct: 25723 tctgtccatctgcctctgtct 25703

>gb|AC156549.8| Mus musculus chromosome 1, clone RP24-104O22, complete sequence
          Length = 164489

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    tctgtccatctgcctctgtct 62
             |||||||||||||||||||||
Sbjct: 26961 tctgtccatctgcctctgtct 26981

>gb|AC139887.3| Homo sapiens BAC clone RP11-440L14 from 4, complete sequence
          Length = 186774

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 85     aagaggtctccctgcccagtg 105
              |||||||||||||||||||||
Sbjct: 174261 aagaggtctccctgcccagtg 174241

>gb|AC064869.6| Homo sapiens BAC clone RP11-534J18 from 2, complete sequence
          Length = 169514

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 41     gtctgtccatctgcctctgtc 61
              |||||||||||||||||||||
Sbjct: 141891 gtctgtccatctgcctctgtc 141871

>dbj|BS000236.1| Pan troglodytes chromosome 22 clone:PTB-058L13, map 22, complete
             sequences
          Length = 160456

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 41    gtctgtccatctgcctctgtctacc 65
             |||||||||| ||||||||||||||
Sbjct: 69612 gtctgtccatttgcctctgtctacc 69636

>dbj|BS000234.1| Pan troglodytes chromosome 22 clone:PTB-190I13, map 22, complete
              sequences
          Length = 174520

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 41     gtctgtccatctgcctctgtctacc 65
              |||||||||| ||||||||||||||
Sbjct: 161327 gtctgtccatttgcctctgtctacc 161351

>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 41     gtctgtccatctgcctctgtctacc 65
              |||| ||||||||||||||||||||
Sbjct: 133877 gtctctccatctgcctctgtctacc 133901

>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171
              region, complete sequence
          Length = 158063

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 41     gtctgtccatctgcctctgtctacc 65
              |||| ||||||||||||||||||||
Sbjct: 133877 gtctctccatctgcctctgtctacc 133901

>ref|XM_473397.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 384

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 230 tccatcttcctcagccagcg 249
           ||||||||||||||||||||
Sbjct: 149 tccatcttcctcagccagcg 130

>gb|AC115858.14| Mus musculus chromosome 7, clone RP24-285C16, complete sequence
          Length = 175843

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 226    ctcttccatcttcctcagcc 245
              ||||||||||||||||||||
Sbjct: 142917 ctcttccatcttcctcagcc 142898

>gb|AC009159.12| Homo sapiens chromosome 16 clone RP11-70D24, complete sequence
          Length = 165921

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    gtctccctgcccagtgatcc 109
             ||||||||||||||||||||
Sbjct: 89704 gtctccctgcccagtgatcc 89723

>gb|AC127234.3| Mus musculus BAC clone RP24-566K14 from chromosome 18, complete sequence
          Length = 181515

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     gtctgtccatctgcctctgt 60
              ||||||||||||||||||||
Sbjct: 131337 gtctgtccatctgcctctgt 131318

>gb|AC122798.3| Mus musculus BAC clone RP23-301A3 from 2, complete sequence
          Length = 206324

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     atggaacagcagcctgaaga 88
              ||||||||||||||||||||
Sbjct: 157492 atggaacagcagcctgaaga 157511

>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21,
             complete sequence
          Length = 141787

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   tccatcttcctcagccagcg 249
             ||||||||||||||||||||
Sbjct: 52754 tccatcttcctcagccagcg 52773

>emb|AL031120.1|HS459L4 Human DNA sequence from clone RP3-459L4 on chromosome 6p22.3-24.1
             Contains part of the SCA1 gene for spinocerebellar ataxia
             1 (olivopontocerebellar ataxia 1, autosomal dominant,
             ataxin 1), complete sequence
          Length = 165363

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    tctgtccatctgcctctgtc 61
             ||||||||||||||||||||
Sbjct: 34964 tctgtccatctgcctctgtc 34983

>gb|AC005185.1| Homo sapiens Xp22 BAC GSHB-383H3 (Genome Systems Human BAC Library)
             complete sequence
          Length = 124351

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   acacatgcaaagtcagataa 130
             ||||||||||||||||||||
Sbjct: 57249 acacatgcaaagtcagataa 57268

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 230      tccatcttcctcagccagcg 249
                ||||||||||||||||||||
Sbjct: 27316826 tccatcttcctcagccagcg 27316845

>emb|BX005248.13| Zebrafish DNA sequence from clone CH211-155H12 in linkage group 8,
             complete sequence
          Length = 185135

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    gaatggaacagcagcctgaa 86
             ||||||||||||||||||||
Sbjct: 54702 gaatggaacagcagcctgaa 54721

>gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complete sequence
          Length = 184937

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     gtctgtccatctgcctctgt 60
              ||||||||||||||||||||
Sbjct: 132705 gtctgtccatctgcctctgt 132686

>emb|AL844577.3| Mouse DNA sequence from clone RP23-129P1 on chromosome 2, complete
              sequence
          Length = 204516

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     atggaacagcagcctgaaga 88
              ||||||||||||||||||||
Sbjct: 124772 atggaacagcagcctgaaga 124753


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,622,248
Number of Sequences: 3902068
Number of extensions: 2622248
Number of successful extensions: 50866
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50823
Number of HSP's gapped (non-prelim): 43
length of query: 286
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 264
effective length of database: 17,147,199,772
effective search space: 4526860739808
effective search space used: 4526860739808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)