ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2e21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467417.1| Oryza sativa (japonica cultivar-group), mRNA 66 2e-07
2dbj|AB110204.1| Oryza sativa (japonica cultivar-group) mRNA for ... 66 2e-07
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
4dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
5gb|AY107338.1| Zea mays PCO113049 mRNA sequence 56 2e-04
6gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, compl... 44 0.63
7gb|AE010141.1| Pyrococcus furiosus DSM 3638, section 16 of 173 o... 44 0.63
8emb|CT967308.1| Human DNA sequence from clone XXyac-830B11 on ch... 44 0.63
9dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complet... 44 0.63
10ref|XM_528429.1| PREDICTED: Pan troglodytes similar to G protein... 42 2.5
11ref|NM_195277.1| Oryza sativa (japonica cultivar-group) putative... 42 2.5
12gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
13ref|XM_595269.2| PREDICTED: Bos taurus similar to G protein-coup... 42 2.5
14gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, comple... 42 2.5
15ref|XM_761577.1| Theileria parva strain Muguga chromosome 1 hypo... 42 2.5
16gb|AF455756.1| Mus musculus tenascin-N (Tnn) mRNA, complete cds 42 2.5
17gb|AY278562.1| Homo sapiens G-protein coupled receptor GPR144 (G... 42 2.5
18gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, comp... 42 2.5
19dbj|AK048033.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 2.5
20dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
21gb|AY255620.1| Homo sapiens G protein-coupled receptor PGR24 mRN... 42 2.5
22gb|AC127684.5| Mus musculus BAC clone RP24-171J12 from chromosom... 42 2.5
23ref|NM_182611.1| Homo sapiens G protein-coupled receptor 144 (GP... 42 2.5
24ref|NM_177839.2| Mus musculus tenascin N (Tnn), mRNA 42 2.5
25gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
26emb|AL137846.24| Human DNA sequence from clone RP11-101K10 on ch... 42 2.5
27dbj|AB065601.1| Homo sapiens gene for seven transmembrane helix ... 42 2.5
28ref|XM_636459.1| Dictyostelium discoideum RNA binding protein (D... 40 9.8
29ref|NM_152818.2| Mus musculus oxysterol binding protein 2 (Osbp2... 40 9.8
30gb|AC158554.6| Mus musculus chromosome 15, clone RP23-353O17, co... 40 9.8
31ref|NM_001001876.1| Gallus gallus basement membrane-specific hep... 40 9.8
32gb|BC058602.1| Mus musculus oxysterol binding protein 2, mRNA (c... 40 9.8
33gb|BC031794.1| Mus musculus oxysterol binding protein 2, mRNA (c... 40 9.8
34gb|U42894.1|USU42894 Unidentified soil organism R6-45 16S rRNA g... 40 9.8
35ref|XM_618841.3| PREDICTED: Mus musculus oxysterol binding prote... 40 9.8
36ref|XM_757515.1| Ustilago maydis 521 hypothetical protein (UM064... 40 9.8
37ref|XM_748689.1| Aspergillus fumigatus Af293 Rho guanyl nucleoti... 40 9.8
38ref|XM_862851.1| PREDICTED: Canis familiaris similar to Rap guan... 40 9.8
39ref|XM_862846.1| PREDICTED: Canis familiaris similar to Rap guan... 40 9.8
40ref|XM_862840.1| PREDICTED: Canis familiaris similar to Rap guan... 40 9.8
41ref|XM_539787.2| PREDICTED: Canis familiaris similar to Rap guan... 40 9.8
42ref|XM_848711.1| PREDICTED: Canis familiaris similar to Rap guan... 40 9.8
43gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, com... 40 9.8
44gb|BC058356.1| Mus musculus oxysterol binding protein 2, mRNA (c... 40 9.8
45gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, co... 40 9.8
46gb|AC122722.7| Medicago truncatula clone mth1-3f12, complete seq... 40 9.8
47gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosom... 40 9.8
48emb|AL353624.8| Human DNA sequence from clone RP1-243N19 on chro... 40 9.8
49emb|AL021408.1|HS523C21 Human DNA sequence from clone RP3-523C21... 40 9.8
50gb|DQ129290.1| Uncultured bacterium clone AKIW700 16S ribosomal ... 40 9.8
51gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosom... 40 9.8
52gb|AC159379.14| Mus musculus 10 BAC RP23-210F14 (Roswell Park Ca... 40 9.8
53emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chro... 40 9.8
54emb|AJ584653.1| Gallus gallus mRNA for basement membrane-specifi... 40 9.8
55emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in... 40 9.8
56gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, co... 40 9.8
57emb|BX322588.8| Zebrafish DNA sequence from clone DKEYP-55C8 in ... 40 9.8
58dbj|AK044598.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 9.8
59gb|BC051185.1| Mus musculus oxysterol binding protein 2, mRNA (c... 40 9.8
60dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
61dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
62emb|BX322607.6| Zebrafish DNA sequence from clone DKEYP-20F6 in ... 40 9.8
63gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occlu... 40 9.8
64gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, co... 40 9.8
65gb|AC130004.4| Homo sapiens 3 BAC RP11-237K2 (Roswell Park Cance... 40 9.8
66dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
67gb|AE016754.1| Mus musculus chromosome 10 high-growth region, se... 40 9.8
68dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
69dbj|AB019231.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.8
70gb|AF128626.1|AF128626 Dictyostelium discoideum RNA binding prot... 40 9.8
71dbj|AK071835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.8
72gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, compl... 40 9.8
73emb|BX247878.5| Zebrafish DNA sequence from clone CH211-266O5 in... 40 9.8
74emb|BX296516.3| Zebrafish DNA sequence from clone DKEY-219E20 in... 40 9.8
75gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 1... 40 9.8
76emb|AL645483.7| Mouse DNA sequence from clone RP23-213O14 on chr... 40 9.8 
>ref|XM_467417.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3468

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 95/111 (85%), Gaps = 6/111 (5%)
 Strand = Plus / Plus

                                                                        
Query: 15   gttactgttggtggtacacggnaagaggcgctttgctgga-ccagagatcagtgaggaag 73
            |||||||| |||||||||||| ||| |||||||||||||| ||| | ||||||||| |||
Sbjct: 2890 gttactgtgggtggtacacgg-aagcggcgctttgctggagccaca-atcagtgagcaag 2947

                                                               
Query: 74   atgaagaagttagtgaagcacaatctgaaagtgtttcagttggcgggcagc 124
            |||| ||    |||||||| || ||||||||||||||| |||| |||||||
Sbjct: 2948 atgaggac---agtgaagctcattctgaaagtgtttcacttggagggcagc 2995



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 445  ggcgaaacaaatcgattgggaaaacgctatggtctttcttcacgacat 492
            |||| ||| |||| |||||||||| |||||||||||||||||| ||||
Sbjct: 3419 ggcggaaccaatcaattgggaaaaagctatggtctttcttcactacat 3466



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 167  caggtgaaaaacgctacaatttgagacgcactacagttgcaaatgc 212
            |||| ||||||||||||||  | || ||||| ||||||||||||||
Sbjct: 3038 caggagaaaaacgctacaacctcaggcgcaccacagttgcaaatgc 3083



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 268  cagacggtagaaactaccgctgatgacacggaaggaacctc 308
            ||||| |||||  ||||||| |||||||| |||||||||||
Sbjct: 3136 cagacagtagaggctaccgcagatgacacagaaggaacctc 3176
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>dbj|AB110204.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein,
            complete cds, contig of clone: OsNMCP1aSE2Nco-5 and
            12FPG031
          Length = 3708

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 95/111 (85%), Gaps = 6/111 (5%)
 Strand = Plus / Plus

                                                                        
Query: 15   gttactgttggtggtacacggnaagaggcgctttgctgga-ccagagatcagtgaggaag 73
            |||||||| |||||||||||| ||| |||||||||||||| ||| | ||||||||| |||
Sbjct: 2890 gttactgtgggtggtacacgg-aagcggcgctttgctggagccaca-atcagtgagcaag 2947

                                                               
Query: 74   atgaagaagttagtgaagcacaatctgaaagtgtttcagttggcgggcagc 124
            |||| ||    |||||||| || ||||||||||||||| |||| |||||||
Sbjct: 2948 atgaggac---agtgaagctcattctgaaagtgtttcacttggagggcagc 2995



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 445  ggcgaaacaaatcgattgggaaaacgctatggtctttcttcacgacataacaa 497
            |||| ||| |||| |||||||||| |||||||||||||||||| |||| ||||
Sbjct: 3419 ggcggaaccaatcaattgggaaaaagctatggtctttcttcactacatgacaa 3471



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                  
Query: 561  attcttggaaatctaggttggtgtgtttggtgatgatg 598
            |||||||||| ||||||||| |||| ||||||||||||
Sbjct: 3532 attcttggaactctaggttg-tgtgcttggtgatgatg 3568



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                          
Query: 167  caggtgaaaaacgctacaatttgagacgcactacagttgcaaatgc 212
            |||| ||||||||||||||  | || ||||| ||||||||||||||
Sbjct: 3038 caggagaaaaacgctacaacctcaggcgcaccacagttgcaaatgc 3083



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 268  cagacggtagaaactaccgctgatgacacggaaggaacctc 308
            ||||| |||||  ||||||| |||||||| |||||||||||
Sbjct: 3136 cagacagtagaggctaccgcagatgacacagaaggaacctc 3176
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 95/111 (85%), Gaps = 6/111 (5%)
 Strand = Plus / Minus

                                                                            
Query: 15       gttactgttggtggtacacggnaagaggcgctttgctgga-ccagagatcagtgaggaag 73
                |||||||| |||||||||||| ||| |||||||||||||| ||| | ||||||||| |||
Sbjct: 29402050 gttactgtgggtggtacacgg-aagcggcgctttgctggagccaca-atcagtgagcaag 29401993

                                                                   
Query: 74       atgaagaagttagtgaagcacaatctgaaagtgtttcagttggcgggcagc 124
                |||| ||    |||||||| || ||||||||||||||| |||| |||||||
Sbjct: 29401992 atgaggac---agtgaagctcattctgaaagtgtttcacttggagggcagc 29401945



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 445      ggcgaaacaaatcgattgggaaaacgctatggtctttcttcacgacataacaa 497
                |||| ||| |||| |||||||||| |||||||||||||||||| |||| ||||
Sbjct: 29401244 ggcggaaccaatcaattgggaaaaagctatggtctttcttcactacatgacaa 29401192



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Minus

                                                      
Query: 561      attcttggaaatctaggttggtgtgtttggtgatgatg 598
                |||||||||| ||||||||| |||| ||||||||||||
Sbjct: 29401131 attcttggaactctaggttg-tgtgcttggtgatgatg 29401095



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 268      cagacggtagaaactaccgctgatgacacggaaggaacctc 308
                ||||| |||||  ||||||| |||||||| |||||||||||
Sbjct: 29401694 cagacagtagaggctaccgcagatgacacagaaggaacctc 29401654
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>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_H06
          Length = 139868

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 95/111 (85%), Gaps = 6/111 (5%)
 Strand = Plus / Minus

                                                                         
Query: 15    gttactgttggtggtacacggnaagaggcgctttgctgga-ccagagatcagtgaggaag 73
             |||||||| |||||||||||| ||| |||||||||||||| ||| | ||||||||| |||
Sbjct: 52922 gttactgtgggtggtacacgg-aagcggcgctttgctggagccaca-atcagtgagcaag 52865

                                                                
Query: 74    atgaagaagttagtgaagcacaatctgaaagtgtttcagttggcgggcagc 124
             |||| ||    |||||||| || ||||||||||||||| |||| |||||||
Sbjct: 52864 atgaggac---agtgaagctcattctgaaagtgtttcacttggagggcagc 52817



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 445   ggcgaaacaaatcgattgggaaaacgctatggtctttcttcacgacataacaa 497
             |||| ||| |||| |||||||||| |||||||||||||||||| |||| ||||
Sbjct: 52116 ggcggaaccaatcaattgggaaaaagctatggtctttcttcactacatgacaa 52064



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Minus

                                                   
Query: 561   attcttggaaatctaggttggtgtgtttggtgatgatg 598
             |||||||||| ||||||||| |||| ||||||||||||
Sbjct: 52003 attcttggaactctaggttg-tgtgcttggtgatgatg 51967



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 268   cagacggtagaaactaccgctgatgacacggaaggaacctc 308
             ||||| |||||  ||||||| |||||||| |||||||||||
Sbjct: 52566 cagacagtagaggctaccgcagatgacacagaaggaacctc 52526
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>gb|AY107338.1| Zea mays PCO113049 mRNA sequence
          Length = 866

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 357 tgcatcccagttgcaagagttctcccaggctgaaactgttgatgcccatgct 408
           ||||||||||||||| ||||| ||||||| ||||  || |||||||||||||
Sbjct: 284 tgcatcccagttgcatgagttttcccaggttgaagttggtgatgcccatgct 335



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 100 gaaagtgtttcagttggcgggcagcctcgtaagaggaggca 140
           |||||||||||| |||| |||||||  ||||||||| ||||
Sbjct: 15  gaaagtgtttcacttggagggcagcgccgtaagaggcggca 55
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>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome
          Length = 149705

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 440   tggatggcgaaacaaatcgattggga 465
             ||||||||||||||||| ||||||||
Sbjct: 53864 tggatggcgaaacaaattgattggga 53889
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>gb|AE010141.1| Pyrococcus furiosus DSM 3638, section 16 of 173 of the complete
            genome
          Length = 12352

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 63   cagtgaggaagatgaagaagtt 84
            ||||||||||||||||||||||
Sbjct: 1866 cagtgaggaagatgaagaagtt 1887
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>emb|CT967308.1| Human DNA sequence from clone XXyac-830B11 on chromosome 6, complete
            sequence
          Length = 31833

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 248  ctgtgaggagaggaaaaaagca 269
            ||||||||||||||||||||||
Sbjct: 5110 ctgtgaggagaggaaaaaagca 5089
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>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D
          Length = 149987

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 440   tggatggcgaaacaaatcgattggga 465
             ||||||||||||||||| ||||||||
Sbjct: 11515 tggatggcgaaacaaattgattggga 11490
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>ref|XM_528429.1| PREDICTED: Pan troglodytes similar to G protein-coupled receptor 144;
            G-protein coupled receptor GPR144 (LOC473059), mRNA
          Length = 3456

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  ccacagcagcagcccctccac 232
            |||||||||||||||||||||
Sbjct: 2877 ccacagcagcagcccctccac 2857
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>ref|NM_195277.1| Oryza sativa (japonica cultivar-group) putative gag-pol polyprotein
            (OSJNBb0038H12.4), mRNA
          Length = 2283

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 200  cagttgcaaatgccacagcag 220
            |||||||||||||||||||||
Sbjct: 2243 cagttgcaaatgccacagcag 2263
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>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0038H12 map E60284SA, complete sequence
          Length = 139190

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 200   cagttgcaaatgccacagcag 220
             |||||||||||||||||||||
Sbjct: 14896 cagttgcaaatgccacagcag 14916
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>ref|XM_595269.2| PREDICTED: Bos taurus similar to G protein-coupled receptor 144
           (LOC517106), mRNA
          Length = 1776

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 212 ccacagcagcagcccctccac 232
           |||||||||||||||||||||
Sbjct: 951 ccacagcagcagcccctccac 931
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>gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, complete sequence
          Length = 213229

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 209   atgccacagcagcagcccctc 229
             |||||||||||||||||||||
Sbjct: 37208 atgccacagcagcagcccctc 37188
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>ref|XM_761577.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_1149) partial mRNA
          Length = 3339

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 63   cagtgaggaagatgaagaagttagt 87
            |||||| ||||||||||||||||||
Sbjct: 2211 cagtgaagaagatgaagaagttagt 2235
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>gb|AF455756.1| Mus musculus tenascin-N (Tnn) mRNA, complete cds
          Length = 5773

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 289  gatgacacggaaggaacctctaaag 313
            ||||||| |||||||||||||||||
Sbjct: 4955 gatgacatggaaggaacctctaaag 4931
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>gb|AY278562.1| Homo sapiens G-protein coupled receptor GPR144 (GPR144) mRNA,
            complete cds
          Length = 2892

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  ccacagcagcagcccctccac 232
            |||||||||||||||||||||
Sbjct: 2241 ccacagcagcagcccctccac 2221
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>gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, complete sequence
          Length = 256719

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 289   gatgacacggaaggaacctctaaag 313
             ||||||| |||||||||||||||||
Sbjct: 80460 gatgacatggaaggaacctctaaag 80484
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>dbj|AK048033.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130031C11 product:hypothetical Fibrinogen
            beta and gamma chains C-terminal globular domain
            containing protein, full insert sequence
          Length = 3343

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 289  gatgacacggaaggaacctctaaag 313
            ||||||| |||||||||||||||||
Sbjct: 3104 gatgacatggaaggaacctctaaag 3080
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 200     cagttgcaaatgccacagcag 220
               |||||||||||||||||||||
Sbjct: 5908987 cagttgcaaatgccacagcag 5908967
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>gb|AY255620.1| Homo sapiens G protein-coupled receptor PGR24 mRNA, partial cds
          Length = 837

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 212 ccacagcagcagcccctccac 232
           |||||||||||||||||||||
Sbjct: 387 ccacagcagcagcccctccac 367
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>gb|AC127684.5| Mus musculus BAC clone RP24-171J12 from chromosome 6, complete sequence
          Length = 178299

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 502    aagaataataattgcatctga 522
              |||||||||||||||||||||
Sbjct: 108094 aagaataataattgcatctga 108114
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>ref|NM_182611.1| Homo sapiens G protein-coupled receptor 144 (GPR144), mRNA
          Length = 2892

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  ccacagcagcagcccctccac 232
            |||||||||||||||||||||
Sbjct: 2241 ccacagcagcagcccctccac 2221
to top
>ref|NM_177839.2| Mus musculus tenascin N (Tnn), mRNA
          Length = 5773

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 289  gatgacacggaaggaacctctaaag 313
            ||||||| |||||||||||||||||
Sbjct: 4955 gatgacatggaaggaacctctaaag 4931
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 200     cagttgcaaatgccacagcag 220
               |||||||||||||||||||||
Sbjct: 5910173 cagttgcaaatgccacagcag 5910153
to top
>emb|AL137846.24| Human DNA sequence from clone RP11-101K10 on chromosome 9, complete
              sequence
          Length = 162839

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 212    ccacagcagcagcccctccac 232
              |||||||||||||||||||||
Sbjct: 142785 ccacagcagcagcccctccac 142765
to top
>dbj|AB065601.1| Homo sapiens gene for seven transmembrane helix receptor, complete
            cds, isolate:CBRC7TM_164
          Length = 18512

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  ccacagcagcagcccctccac 232
            |||||||||||||||||||||
Sbjct: 3582 ccacagcagcagcccctccac 3562
to top
>ref|XM_636459.1| Dictyostelium discoideum RNA binding protein (DDB0218189), partial
           mRNA
          Length = 2360

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 578 ttggtgtgtttggtgatgat 597
           ||||||||||||||||||||
Sbjct: 924 ttggtgtgtttggtgatgat 905
to top
>ref|NM_152818.2| Mus musculus oxysterol binding protein 2 (Osbp2), mRNA
          Length = 4138

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 57   agagatcagtgaggaagatgaaga 80
            ||||| ||||||||||||||||||
Sbjct: 1353 agagaacagtgaggaagatgaaga 1376
to top
>gb|AC158554.6| Mus musculus chromosome 15, clone RP23-353O17, complete sequence
          Length = 192019

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   cgtaagaggaggcagccatc 146
             ||||||||||||||||||||
Sbjct: 98166 cgtaagaggaggcagccatc 98185
to top
>ref|NM_001001876.1| Gallus gallus basement membrane-specific heparan sulfate proteoglycan
             core protein (HSPG), mRNA
          Length = 12255

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tgccacagcagcagcccctc 229
             ||||||||||||||||||||
Sbjct: 11795 tgccacagcagcagcccctc 11776
to top
>gb|BC058602.1| Mus musculus oxysterol binding protein 2, mRNA (cDNA clone
           MGC:65555 IMAGE:6467653), complete cds
          Length = 1822

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 57  agagatcagtgaggaagatgaaga 80
           ||||| ||||||||||||||||||
Sbjct: 316 agagaacagtgaggaagatgaaga 339
to top
>gb|BC031794.1| Mus musculus oxysterol binding protein 2, mRNA (cDNA clone
           MGC:25110 IMAGE:4501119), complete cds
          Length = 3123

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 57  agagatcagtgaggaagatgaaga 80
           ||||| ||||||||||||||||||
Sbjct: 316 agagaacagtgaggaagatgaaga 339
to top
>gb|U42894.1|USU42894 Unidentified soil organism R6-45 16S rRNA gene, partial sequence
          Length = 270

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 124 cctcgtaagaggaggcagcc 143
           ||||||||||||||||||||
Sbjct: 204 cctcgtaagaggaggcagcc 223
to top
>ref|XM_618841.3| PREDICTED: Mus musculus oxysterol binding protein 2, transcript
            variant 2 (Osbp2), mRNA
          Length = 3646

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 57   agagatcagtgaggaagatgaaga 80
            ||||| ||||||||||||||||||
Sbjct: 1347 agagaacagtgaggaagatgaaga 1370
to top
>ref|XM_757515.1| Ustilago maydis 521 hypothetical protein (UM06461.1) partial mRNA
          Length = 4149

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 gcaaatgccacagcagcagc 224
           ||||||||||||||||||||
Sbjct: 755 gcaaatgccacagcagcagc 736
to top
>ref|XM_748689.1| Aspergillus fumigatus Af293 Rho guanyl nucleotide exchange factor
           (Afu5g08550) partial mRNA
          Length = 3600

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 133 aggaggcagccatctggccc 152
           ||||||||||||||||||||
Sbjct: 706 aggaggcagccatctggccc 725
to top
>ref|XM_862851.1| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 5 (LOC482670), mRNA
          Length = 6850

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 233  gggagaagaagaaagctgtgagga 256
            ||||| ||||||||||||||||||
Sbjct: 3651 gggaggagaagaaagctgtgagga 3628
to top
>ref|XM_862846.1| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 4 (LOC482670), mRNA
          Length = 7066

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 233  gggagaagaagaaagctgtgagga 256
            ||||| ||||||||||||||||||
Sbjct: 3870 gggaggagaagaaagctgtgagga 3847
to top
>ref|XM_862840.1| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 3 (LOC482670), mRNA
          Length = 7042

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 233  gggagaagaagaaagctgtgagga 256
            ||||| ||||||||||||||||||
Sbjct: 3846 gggaggagaagaaagctgtgagga 3823
to top
>ref|XM_539787.2| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 1 (LOC482670), mRNA
          Length = 7048

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 233  gggagaagaagaaagctgtgagga 256
            ||||| ||||||||||||||||||
Sbjct: 3858 gggaggagaagaaagctgtgagga 3835
to top
>ref|XM_848711.1| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 2 (LOC482670), mRNA
          Length = 7081

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 233  gggagaagaagaaagctgtgagga 256
            ||||| ||||||||||||||||||
Sbjct: 3882 gggaggagaagaaagctgtgagga 3859
to top
>gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, complete sequence
          Length = 195511

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    acataacaagaggaagaata 508
              ||||||||||||||||||||
Sbjct: 147294 acataacaagaggaagaata 147313
to top
>gb|BC058356.1| Mus musculus oxysterol binding protein 2, mRNA (cDNA clone
           MGC:66677 IMAGE:5696357), complete cds
          Length = 3281

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 57  agagatcagtgaggaagatgaaga 80
           ||||| ||||||||||||||||||
Sbjct: 496 agagaacagtgaggaagatgaaga 519
to top
>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence
          Length = 211926

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tgccacagcagcagcccctc 229
             ||||||||||||||||||||
Sbjct: 56574 tgccacagcagcagcccctc 56555
to top
>gb|AC122722.7| Medicago truncatula clone mth1-3f12, complete sequence
          Length = 116833

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    gaagatgaagaagttagtga 89
             ||||||||||||||||||||
Sbjct: 72633 gaagatgaagaagttagtga 72614
to top
>gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosome 9, complete sequence
          Length = 191274

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ctgtgaggagaggaaaaaag 267
             ||||||||||||||||||||
Sbjct: 49082 ctgtgaggagaggaaaaaag 49101
to top
>emb|AL353624.8| Human DNA sequence from clone RP1-243N19 on chromosome 6, complete
             sequence
          Length = 23424

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   ggtgaggagtatggtgatat 434
             ||||||||||||||||||||
Sbjct: 17732 ggtgaggagtatggtgatat 17751
to top
>emb|AL021408.1|HS523C21 Human DNA sequence from clone RP3-523C21 on chromosome 6q23.1-23.3
             Contains two novels genes, complete sequence
          Length = 146831

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 505   aataataattgcatctgatt 524
             ||||||||||||||||||||
Sbjct: 60231 aataataattgcatctgatt 60250
to top
>gb|DQ129290.1| Uncultured bacterium clone AKIW700 16S ribosomal RNA gene, partial
            sequence
          Length = 1420

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  cctcgtaagaggaggcagcc 143
            ||||||||||||||||||||
Sbjct: 1387 cctcgtaagaggaggcagcc 1406
to top
>gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosome 9, complete sequence
          Length = 226160

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    ctgtgaggagaggaaaaaag 267
              ||||||||||||||||||||
Sbjct: 211055 ctgtgaggagaggaaaaaag 211074
to top
>gb|AC159379.14| Mus musculus 10 BAC RP23-210F14 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 226172

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    cagtgaggaagatgaagaag 82
             ||||||||||||||||||||
Sbjct: 90653 cagtgaggaagatgaagaag 90672
to top
>emb|AL731853.9| Mouse DNA sequence from clone RP23-128G5 on chromosome 11 Contains
            the 5' end of the Osbp2 gene for oxysterol binding
            protein 2, a novel pseudogene, two novel genes, the
            Dusp18 gene for dual specificity phosphatase 18 and five
            CpG islands, complete sequence
          Length = 205509

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 57   agagatcagtgaggaagatgaaga 80
            ||||| ||||||||||||||||||
Sbjct: 8199 agagaacagtgaggaagatgaaga 8176
to top
>emb|AJ584653.1| Gallus gallus mRNA for basement membrane-specific heparan sulfate
             proteoglycan core protein precursor (HSPG gene)
          Length = 12255

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tgccacagcagcagcccctc 229
             ||||||||||||||||||||
Sbjct: 11795 tgccacagcagcagcccctc 11776
to top
>emb|BX323576.9| Zebrafish DNA sequence from clone DKEYP-77A12 in linkage group 7,
             complete sequence
          Length = 163069

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 165   cacaggtgaaaaacgctacaattt 188
             ||||||||||||||| ||||||||
Sbjct: 94689 cacaggtgaaaaacgatacaattt 94666
to top
>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence
          Length = 188117

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   gaagaataataattgcatct 520
             ||||||||||||||||||||
Sbjct: 98048 gaagaataataattgcatct 98067
to top
>emb|BX322588.8| Zebrafish DNA sequence from clone DKEYP-55C8 in linkage group 2, complete
              sequence
          Length = 192641

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 605    tagatttttcttgcactcat 624
              ||||||||||||||||||||
Sbjct: 142108 tagatttttcttgcactcat 142089
to top
>dbj|AK044598.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930026E05 product:oxysterol binding protein 2,
           full insert sequence
          Length = 2701

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 57  agagatcagtgaggaagatgaaga 80
           ||||| ||||||||||||||||||
Sbjct: 141 agagaacagtgaggaagatgaaga 164
to top
>gb|BC051185.1| Mus musculus oxysterol binding protein 2, mRNA (cDNA clone
           IMAGE:6467654), containing frame-shift errors
          Length = 1810

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 57  agagatcagtgaggaagatgaaga 80
           ||||| ||||||||||||||||||
Sbjct: 312 agagaacagtgaggaagatgaaga 335
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 339      ctctgaatcagctgatggtg 358
                ||||||||||||||||||||
Sbjct: 19319522 ctctgaatcagctgatggtg 19319503
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 87      tgaagcacaatctgaaagtg 106
               ||||||||||||||||||||
Sbjct: 4434455 tgaagcacaatctgaaagtg 4434436
to top
>emb|BX322607.6| Zebrafish DNA sequence from clone DKEYP-20F6 in linkage group 2, complete
              sequence
          Length = 167493

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 605    tagatttttcttgcactcat 624
              ||||||||||||||||||||
Sbjct: 133474 tagatttttcttgcactcat 133455
to top
>gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occludens 1) (TJP1) gene,
             complete cds
          Length = 125625

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 501   gaagaataataattgcatct 520
             ||||||||||||||||||||
Sbjct: 81254 gaagaataataattgcatct 81235
to top
>gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, complete sequence
          Length = 166871

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    gggagaagaagaaagctgtg 252
              ||||||||||||||||||||
Sbjct: 102883 gggagaagaagaaagctgtg 102902
to top
>gb|AC130004.4| Homo sapiens 3 BAC RP11-237K2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 118699

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 578   ttggtgtgtttggtgatgat 597
             ||||||||||||||||||||
Sbjct: 91688 ttggtgtgtttggtgatgat 91707
to top
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0489A01
          Length = 137174

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    tgaagcacaatctgaaagtg 106
             ||||||||||||||||||||
Sbjct: 94537 tgaagcacaatctgaaagtg 94518
to top
>gb|AE016754.1| Mus musculus chromosome 10 high-growth region, section 2 of 2 of the
              complete sequence
          Length = 303688

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     cagtgaggaagatgaagaag 82
              ||||||||||||||||||||
Sbjct: 206065 cagtgaggaagatgaagaag 206046
to top
>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0438E12
          Length = 146851

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   ctctgaatcagctgatggtg 358
             ||||||||||||||||||||
Sbjct: 24295 ctctgaatcagctgatggtg 24276
to top
>dbj|AB019231.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGO3
          Length = 43570

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   gaggagaggaaaaaagcaga 271
             ||||||||||||||||||||
Sbjct: 25007 gaggagaggaaaaaagcaga 24988
to top
>gb|AF128626.1|AF128626 Dictyostelium discoideum RNA binding protein PufA (pufA) gene,
            complete cds
          Length = 2940

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 578  ttggtgtgtttggtgatgat 597
            ||||||||||||||||||||
Sbjct: 1328 ttggtgtgtttggtgatgat 1309
to top
>dbj|AK071835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115A04, full
            insert sequence
          Length = 1679

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  ctctgaatcagctgatggtg 358
            ||||||||||||||||||||
Sbjct: 1034 ctctgaatcagctgatggtg 1015
to top
>gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, complete sequence
          Length = 189515

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 376    ttctcccaggctgaaactgttgat 399
              ||||| ||||||||||||||||||
Sbjct: 125525 ttctctcaggctgaaactgttgat 125548
to top
>emb|BX247878.5| Zebrafish DNA sequence from clone CH211-266O5 in linkage group 7,
             complete sequence
          Length = 190715

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 165   cacaggtgaaaaacgctacaattt 188
             ||||||||||||||| ||||||||
Sbjct: 94816 cacaggtgaaaaacgatacaattt 94839
to top
>emb|BX296516.3| Zebrafish DNA sequence from clone DKEY-219E20 in linkage group 20,
             complete sequence
          Length = 160555

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   ggagaagaagaaagctgtga 253
             ||||||||||||||||||||
Sbjct: 13494 ggagaagaagaaagctgtga 13475
to top
>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence
          Length = 207280

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    tgccacagcagcagcccctc 229
              ||||||||||||||||||||
Sbjct: 158805 tgccacagcagcagcccctc 158786
to top
>emb|AL645483.7| Mouse DNA sequence from clone RP23-213O14 on chromosome 4, complete
             sequence
          Length = 87103

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 240   gaagaaagctgtgaggagaggaaa 263
             |||||||||||| |||||||||||
Sbjct: 72688 gaagaaagctgtcaggagaggaaa 72711


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,191,170
Number of Sequences: 3902068
Number of extensions: 7191170
Number of successful extensions: 152918
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152487
Number of HSP's gapped (non-prelim): 423
length of query: 713
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 690
effective length of database: 17,143,297,704
effective search space: 11828875415760
effective search space used: 11828875415760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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