ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd2e20 |
|---|---|
| Clone Library Name | barley_pub |
>MYO5A_CHICK (Q02440) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,| non-muscle) (Myosin heavy chain p190) (Myosin-V) Length = 1829 Score = 42.0 bits (97), Expect = 4e-04 Identities = 23/51 (45%), Positives = 32/51 (62%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 K++ +R A LQ+ +RG LVRN Y+ M RE ++ IQK+VR AR Y Sbjct: 833 KRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHY 883 Score = 35.8 bits (81), Expect = 0.031 Identities = 20/43 (46%), Positives = 27/43 (62%) Frame = +2 Query: 23 VRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKAR 151 +R A +Q +RG L+R Y MRR AA+ IQ+ VR H+AR Sbjct: 767 LRAACIRIQKTIRGWLMRKKYMRMRR--AAITIQRYVRGHQAR 807 Score = 35.4 bits (80), Expect = 0.040 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 K+++ +RRAA +Q +VRG R +RR AA+ IQK R + R Y Sbjct: 785 KKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRY 835 Score = 30.4 bits (67), Expect = 1.3 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +2 Query: 14 FVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 F+ RAA +Q F R +VR Y+CMR A + +Q +R + R Y Sbjct: 812 FLRRTRAAIIIQKFQRMYVVRKRYQCMR--DATIALQALLRGYLVRNKY 858
>MYO5A_HUMAN (Q9Y4I1) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,| non-muscle) (Myosin heavy chain 12) (Myoxin) Length = 1855 Score = 41.2 bits (95), Expect = 7e-04 Identities = 26/47 (55%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = +2 Query: 23 VRRAATH-LQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 +RRAAT LQS++RG L RN Y + RE AV IQK VR AR Y Sbjct: 836 IRRAATIVLQSYLRGFLARNRYRKILREHKAVIIQKRVRGWLARTHY 882 Score = 36.2 bits (82), Expect = 0.024 Identities = 23/72 (31%), Positives = 33/72 (45%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXX 187 K+++ +R+AA +Q +VRG R + +RR AA IQK R + R Y Sbjct: 784 KKYLRMRKAAITMQRYVRGYQARCYAKFLRRTKAATIIQKYWRMYVVRRRYKIRRAATIV 843 Query: 188 XXXGARAMSARN 223 R ARN Sbjct: 844 LQSYLRGFLARN 855 Score = 30.8 bits (68), Expect = 0.99 Identities = 17/43 (39%), Positives = 27/43 (62%) Frame = +2 Query: 23 VRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKAR 151 +R A +Q +RG L+R Y MR+ AA+ +Q+ VR ++AR Sbjct: 766 LRAACIRIQKTIRGWLLRKKYLRMRK--AAITMQRYVRGYQAR 806
>MYO5A_RAT (Q9QYF3) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,| non-muscle) Length = 1828 Score = 41.2 bits (95), Expect = 7e-04 Identities = 26/47 (55%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = +2 Query: 23 VRRAATH-LQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 +RRAAT LQS++RG L RN Y + RE AV IQK VR AR Y Sbjct: 836 IRRAATIVLQSYLRGYLARNRYRKILREHKAVIIQKRVRGWLARTHY 882 Score = 36.6 bits (83), Expect = 0.018 Identities = 23/72 (31%), Positives = 33/72 (45%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXX 187 K+++ ++RAA +Q +VRG R + +RR AA IQK R + R Y Sbjct: 784 KRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRKYKIRRAATIV 843 Query: 188 XXXGARAMSARN 223 R ARN Sbjct: 844 LQSYLRGYLARN 855 Score = 35.8 bits (81), Expect = 0.031 Identities = 18/43 (41%), Positives = 28/43 (65%) Frame = +2 Query: 23 VRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKAR 151 +R A +Q +RG L+R Y CM+R AA+ +Q+ VR ++AR Sbjct: 766 LRAACIRIQKTIRGWLLRKRYLCMQR--AAITVQRYVRGYQAR 806
>MYO5A_MOUSE (Q99104) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,| non-muscle) Length = 1853 Score = 40.4 bits (93), Expect = 0.001 Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = +2 Query: 23 VRRAATH-LQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 +RRAAT +QS++RG L RN Y + RE AV IQK VR AR Y Sbjct: 836 IRRAATIVIQSYLRGYLTRNRYRKILREYKAVIIQKRVRGWLARTHY 882 Score = 35.8 bits (81), Expect = 0.031 Identities = 18/43 (41%), Positives = 28/43 (65%) Frame = +2 Query: 23 VRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKAR 151 +R A +Q +RG L+R Y CM+R AA+ +Q+ VR ++AR Sbjct: 766 LRAACIRIQKTIRGWLLRKRYLCMQR--AAITVQRYVRGYQAR 806 Score = 34.7 bits (78), Expect = 0.069 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXX 187 K+++ ++RAA +Q +VRG R + +RR AA IQK R + R Y Sbjct: 784 KRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRRYKIRRAATIV 843 Query: 188 XXXGARAMSARN 223 R RN Sbjct: 844 IQSYLRGYLTRN 855
>MYO5B_RAT (P70569) Myosin-5B (Myosin Vb) (Myosin heavy chain myr 6)| Length = 1846 Score = 39.3 bits (90), Expect = 0.003 Identities = 22/46 (47%), Positives = 26/46 (56%) Frame = +2 Query: 23 VRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 +R A LQ F RG L R L E +RR AA+ QK R KAR +Y Sbjct: 789 LRAATLTLQRFCRGYLARRLTEHLRRTRAAIVFQKQYRMLKARRAY 834
>MYO5B_HUMAN (Q9ULV0) Myosin-5B (Myosin Vb)| Length = 1849 Score = 39.3 bits (90), Expect = 0.003 Identities = 24/66 (36%), Positives = 32/66 (48%) Frame = +2 Query: 23 VRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXXXXXGA 202 ++ A LQ + RG L R L E +RR AAV +QK+ R +AR +Y Sbjct: 787 LKGATLTLQRYCRGHLARRLAEHLRRIRAAVVLQKHYRMQRARQAYQRVRRAAVVIQAFT 846 Query: 203 RAMSAR 220 RAM R Sbjct: 847 RAMFVR 852 Score = 36.2 bits (82), Expect = 0.024 Identities = 23/66 (34%), Positives = 29/66 (43%) Frame = +2 Query: 23 VRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXXXXXGA 202 VRRAA +Q+F R VR Y + E A IQK+VR AR + Sbjct: 835 VRRAAVVIQAFTRAMFVRRTYRQVLMEHKATTIQKHVRGWMARRHFQRLRDAAIVIQCAF 894 Query: 203 RAMSAR 220 R + AR Sbjct: 895 RMLKAR 900
>ASPM_BOVIN (P62285) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3371 Score = 38.1 bits (87), Expect = 0.006 Identities = 22/51 (43%), Positives = 31/51 (60%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 K F+ VRRA T+LQ+ RG VR + ++ AAA+KIQ R ++ R Y Sbjct: 1712 KHFLQVRRAVTYLQATYRGYKVRR--QLQQQSAAALKIQAAFRGYRQRTKY 1760 Score = 29.3 bits (64), Expect = 2.9 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +2 Query: 26 RRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 R + LQ+F+RG LVR R+ AAV +Q R K R Y Sbjct: 1645 RASCIKLQAFLRGYLVRKQVRLQRK--AAVSLQSYFRMRKMRLDY 1687 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 11 QFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRH 142 ++ +RRAA LQS RG R +++ A+ IQ RRH Sbjct: 1859 EYTALRRAAVMLQSAWRGRAARR--RIQKQQRCAIIIQAYYRRH 1900
>ASPM_SHEEP (P62297) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3374 Score = 36.2 bits (82), Expect = 0.024 Identities = 22/51 (43%), Positives = 30/51 (58%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 K F+ VRRA T LQ+ RG VR + ++ AAA+KIQ R ++ R Y Sbjct: 1715 KHFLQVRRAVTCLQAAYRGYKVRR--QLQQQSAAALKIQAAFRGYRQRTKY 1763 Score = 28.9 bits (63), Expect = 3.8 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 23 VRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 +R + LQ+F+RG LVR R+ AAV +Q R K R Y Sbjct: 1647 LRASCIKLQAFLRGYLVRKQVRLQRK--AAVLLQSYFRMRKMRLEY 1690 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 11 QFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRH 142 +++ +RRAA LQS RG R +++ A+ IQ RRH Sbjct: 1862 EYMALRRAAVTLQSAWRGRAARR--RIQKQQRCAIIIQACYRRH 1903
>ASPM_COLGU (P62287) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3477 Score = 35.0 bits (79), Expect = 0.053 Identities = 21/51 (41%), Positives = 31/51 (60%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 K+F+ V++AAT LQ+ RG +R L + ++ AAVKIQ R + R Y Sbjct: 1796 KKFLRVKKAATCLQAAYRGYKIRQLIK--QQSIAAVKIQSAFRGYNKRVKY 1844 Score = 33.1 bits (74), Expect = 0.20 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R KAR Y Sbjct: 1723 EEYMQMRESCIKLQAFVRGYLVRKQMRLQRK--AVISLQSYFRMRKARQYY 1771
>ASPM_FELCA (P62288) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3461 Score = 34.7 bits (78), Expect = 0.069 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 +++V +R + LQ+FVRG LVR R+ AAV +Q R K R Y Sbjct: 1724 EEYVQMRESCIKLQAFVRGHLVRKQMRSQRK--AAVSLQSYFRMRKMRQHY 1772 Score = 31.2 bits (69), Expect = 0.76 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 +QF+ +++A LQS RG +VR + M R AA IQ R H+A Y Sbjct: 2308 QQFLRLQKAVITLQSSYRGWVVRKKMQEMHR--AATVIQAAFRMHRAHVRY 2356
>ASPM_CANFA (P62286) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 3452 Score = 34.3 bits (77), Expect = 0.090 Identities = 20/50 (40%), Positives = 27/50 (54%) Frame = +2 Query: 11 QFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 Q+V +R + LQ+FVRG LVR R+ AA+ +Q R K R Y Sbjct: 1716 QYVQMRESCIKLQAFVRGHLVRKQIRLQRQ--AAISLQSYFRMRKKRQYY 1763 Score = 28.5 bits (62), Expect = 4.9 Identities = 13/40 (32%), Positives = 26/40 (65%) Frame = +2 Query: 41 HLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 + +++++G + R Y +++ AAA+++Q RR KAR Y Sbjct: 1512 YYKAYLKGKMERTNY--LQKRAAAIRLQTAFRRMKARNLY 1549
>ASPM_SAGLB (P62295) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 1527 Score = 33.5 bits (75), Expect = 0.15 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R KAR Y Sbjct: 316 EEYMQMRESCIKLQAFVRGYLVRKQMRLQRK--AVISLQSYYRMRKARQCY 364
>ASPM_ATEGE (P62284) Abnormal spindle-like microcephaly-associated protein| homolog (Fragment) Length = 1564 Score = 33.1 bits (74), Expect = 0.20 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R KAR Y Sbjct: 361 EEYMQMRESCIKLQAFVRGYLVRKQIRLQRK--AVISLQSYFRMRKARQYY 409
>ASPM_MACMU (P62292) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3479 Score = 33.1 bits (74), Expect = 0.20 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R KAR Y Sbjct: 1723 EEYMQMRESCIKLQAFVRGYLVRKQMRLQRK--AVISLQSYFRMRKARQYY 1771
>ASPM_AOTVO (P62283) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3473 Score = 33.1 bits (74), Expect = 0.20 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R KAR Y Sbjct: 1719 EEYMQMRESCIKLQAFVRGYLVRKQMRLQRK--AVISLQSYFRMRKARQYY 1767
>ASPM_MACFA (P62291) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3476 Score = 33.1 bits (74), Expect = 0.20 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R KAR Y Sbjct: 1723 EEYMQMRESCIKLQAFVRGYLVRKQMRLQRK--AVISLQSYFRMRKARQYY 1771
>ASPM_GORGO (P62289) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3476 Score = 33.1 bits (74), Expect = 0.20 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R KAR Y Sbjct: 1722 EEYMQMRESCIKLQAFVRGYLVRKQMRLQRK--AVISLQSYFRMRKARQYY 1770 Score = 29.3 bits (64), Expect = 2.9 Identities = 20/72 (27%), Positives = 32/72 (44%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXX 187 ++++ + +A LQ+ RG VR M + AA IQ N RR++ + + Sbjct: 2160 EKYLTILKAVKILQASFRGVRVRRTLRKM--QIAATLIQSNYRRYRKQTYFNKLKKITKT 2217 Query: 188 XXXGARAMSARN 223 RAM RN Sbjct: 2218 VQQRYRAMKERN 2229
>ASPM_HYLLA (P62290) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3477 Score = 33.1 bits (74), Expect = 0.20 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R KAR Y Sbjct: 1723 EEYMQMRESCIKLQAFVRGYLVRKQMRLQRK--AVISLQSYFRMRKARQYY 1771 Score = 29.3 bits (64), Expect = 2.9 Identities = 19/72 (26%), Positives = 33/72 (45%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXX 187 ++++ + +A LQ+ RG VR + + + AA IQ N RR++ + + Sbjct: 2161 EKYLTILKAVKILQASFRGVRVR--WTLRKMQIAATLIQSNYRRYRQQTYFNKLKKITKT 2218 Query: 188 XXXGARAMSARN 223 RAM RN Sbjct: 2219 VQQRYRAMKERN 2230
>ASPM_HUMAN (Q8IZT6) Abnormal spindle-like microcephaly-associated protein| (Abnormal spindle protein homolog) (Asp homolog) Length = 3477 Score = 33.1 bits (74), Expect = 0.20 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R KAR Y Sbjct: 1723 EEYMQMRESCIKLQAFVRGYLVRKQMRLQRK--AVISLQSYFRMRKARQYY 1771
>ASPM_MOUSE (Q8CJ27) Abnormal spindle-like microcephaly-associated protein| homolog (Calmodulin-binding protein 1) (Spindle and hydroxyurea checkpoint abnormal protein) (Calmodulin-binding protein Sha1) Length = 3122 Score = 32.3 bits (72), Expect = 0.34 Identities = 24/69 (34%), Positives = 29/69 (42%) Frame = +2 Query: 11 QFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXXX 190 QF+ R A LQS RG VR + R+ AAVKIQ R A+ Y Sbjct: 1838 QFLKTREAVVCLQSAYRGWQVRQ--QLRRQHEAAVKIQSTFRMAVAQQQYKLLRAAAAVI 1895 Query: 191 XXGARAMSA 217 RA +A Sbjct: 1896 QQHVRARAA 1904 Score = 30.0 bits (66), Expect = 1.7 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 K+++ VR + LQS RG LVR + AA+ +Q R AR Y Sbjct: 1691 KEYIQVRESCIKLQSHFRGCLVRKQLRLQCK--AAISLQSYFRMRTARQRY 1739
>MYO5C_HUMAN (Q9NQX4) Myosin-5C (Myosin Vc)| Length = 1742 Score = 32.0 bits (71), Expect = 0.45 Identities = 18/46 (39%), Positives = 24/46 (52%) Frame = +2 Query: 14 FVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKAR 151 + L+R A +Q++ RG L R Y M E AV +QK R AR Sbjct: 827 YQLIRMATITMQAYSRGFLARRRYRKMLEEHKAVILQKYARAWLAR 872 Score = 29.3 bits (64), Expect = 2.9 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRG--TLVRNLYECMRREA-AAVKIQKNVRRHKARGSYXXXXXX 178 K+F+ RRAA +Q + RG T+ + + +EA AA+ IQK+ R + R Y Sbjct: 774 KKFLRERRAALIIQQYFRGQQTVRKAITAVALKEAWAAIIIQKHCRGYLVRSLYQLIRMA 833 Query: 179 XXXXXXGARAMSAR 220 +R AR Sbjct: 834 TITMQAYSRGFLAR 847
>ASPM_SAIBB (P62296) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3469 Score = 32.0 bits (71), Expect = 0.45 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR R+ A + +Q R K+R Y Sbjct: 1714 EEYMQMRESCIKLQAFVRGYLVRKQMRLQRK--AVISLQSYFRMRKSRQYY 1762 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLV--RNLYECMRREAAAVKIQKNVRR 139 ++F+ +++AA +Q R T+ NL++ ++ AAV IQ + RR Sbjct: 2416 RRFISLKKAAIFIQRKYRATICAKHNLHQFLQLRKAAVTIQSSYRR 2461
>ASPM_PANTR (P62293) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3477 Score = 31.2 bits (69), Expect = 0.76 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG LVR + R A + +Q R KA+ Y Sbjct: 1723 EEYMQMRESCIKLQAFVRGYLVRK--QMRLRRKAVISLQSYFRMRKAQQYY 1771 Score = 29.3 bits (64), Expect = 2.9 Identities = 20/72 (27%), Positives = 32/72 (44%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXX 187 ++++ + +A LQ+ RG VR M + AA IQ N RR++ + + Sbjct: 2161 EKYLTILKAVKVLQASFRGVRVRRTLRKM--QIAATLIQSNYRRYRQQTYFNKLKKITKT 2218 Query: 188 XXXGARAMSARN 223 RAM RN Sbjct: 2219 VQQRYRAMKERN 2230
>ASPM_PONPY (P62294) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3471 Score = 30.8 bits (68), Expect = 0.99 Identities = 17/51 (33%), Positives = 27/51 (52%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 ++++ +R + LQ+FVRG VR R+ A + +Q R KAR Y Sbjct: 1717 EEYMQMRESCIKLQAFVRGYRVRKQMRLQRK--AVISLQSYFRMRKARQYY 1765 Score = 29.3 bits (64), Expect = 2.9 Identities = 20/72 (27%), Positives = 32/72 (44%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXX 187 ++++ + +A LQ+ RG VR M + AA IQ N RR++ + + Sbjct: 2155 EKYLTILKAVKILQASFRGVRVRRTLRKM--QIAATLIQSNYRRYRQQTYFNKLKKITKT 2212 Query: 188 XXXGARAMSARN 223 RAM RN Sbjct: 2213 VQQRYRAMKERN 2224 Score = 29.3 bits (64), Expect = 2.9 Identities = 22/68 (32%), Positives = 28/68 (41%) Frame = +2 Query: 14 FVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSYXXXXXXXXXXX 193 F+ + A LQS RG VR + R AA+KIQ R KAR + Sbjct: 1865 FLKTKAAVISLQSTYRGWKVRK--QIRREHQAALKIQSAFRMAKARKQFRLFKTAALVIQ 1922 Query: 194 XGARAMSA 217 RA +A Sbjct: 1923 QNFRAWTA 1930
>MYO2_SACKL (Q875Q8) Myosin-2 (Class V unconventional myosin MYO2) (Type V| myosin heavy chain MYO2) (Myosin V MYO2) Length = 1554 Score = 30.4 bits (67), Expect = 1.3 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +2 Query: 32 AATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGSY 160 A T LQS VR L + R+ AAV IQK +R + R S+ Sbjct: 851 AITRLQSLVRKQLAQKELLQRRQRDAAVSIQKKIRAFEPRQSF 893
>ATR_DROME (Q9VXG8) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia| telangiectasia and Rad3-related protein homolog) (ATR homolog) (dATR) (Meiotic protein 41) Length = 2517 Score = 29.6 bits (65), Expect = 2.2 Identities = 16/46 (34%), Positives = 26/46 (56%) Frame = +2 Query: 11 QFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKA 148 +F+++R A+ + GT + +LY R E + IQK +RRH A Sbjct: 1074 EFIILRNAS------MLGTFITDLYFLDRMENVSPSIQKCIRRHTA 1113
>CMTA2_ARATH (Q6NPP4) Calmodulin-binding transcription activator 2| (Signal-responsive protein 4) (Ethylene-induced calmodulin-binding protein c) (EICBP.c) (AtER66) Length = 1050 Score = 27.7 bits (60), Expect = 8.4 Identities = 15/50 (30%), Positives = 27/50 (54%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKARGS 157 K+F+L+R+ +Q+ VRG VR Y + ++K + R + +GS Sbjct: 888 KEFLLIRQRIVKIQAHVRGHQVRKQYRAIIWSVGL--LEKIILRWRRKGS 935
>MYO2A_SACCA (Q875X3) Myosin-2A (Class V unconventional myosin MYO2A) (Type V| myosin heavy chain MYO2A) (Myosin V MYO2A) Length = 1567 Score = 27.7 bits (60), Expect = 8.4 Identities = 14/48 (29%), Positives = 27/48 (56%) Frame = +2 Query: 8 KQFVLVRRAATHLQSFVRGTLVRNLYECMRREAAAVKIQKNVRRHKAR 151 KQ++L++ + + L ++ +GT++R E + AA IQ R + R Sbjct: 807 KQYMLMKASLSLLGAYSKGTVIRQRVEYELEQHAATLIQTMYRGYSKR 854 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,396,893 Number of Sequences: 219361 Number of extensions: 392199 Number of successful extensions: 1099 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 1011 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1098 length of database: 80,573,946 effective HSP length: 50 effective length of database: 69,605,896 effective search space used: 1670541504 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
