ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2e18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome... 40 0.57
2ref|NM_169222.2| Drosophila melanogaster CG31462-PA (CG31462) mR... 40 0.57
3gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, r... 40 0.57
4gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, r... 40 0.57
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 0.57
6gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 0.57
7gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, com... 40 0.57
8gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16... 40 0.57
9gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds 40 0.57
10gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 38 2.2
11gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 38 2.2
12gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete g... 38 2.2
13gb|CP000088.1| Thermobifida fusca YX, complete genome 38 2.2
14emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome... 38 2.2
15emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 38 2.2
16emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in ... 38 2.2
17gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 38 2.2
18dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 2.2
19gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, co... 36 8.8
20gb|AC137586.3| Oryza sativa (japonica cultivar-group) chromosome... 36 8.8
21gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 36 8.8
22ref|XM_983863.1| PREDICTED: Mus musculus breakpoint cluster regi... 36 8.8
23ref|XM_983785.1| PREDICTED: Mus musculus breakpoint cluster regi... 36 8.8
24ref|XM_898043.2| PREDICTED: Mus musculus breakpoint cluster regi... 36 8.8
25ref|XM_983429.1| PREDICTED: Mus musculus breakpoint cluster regi... 36 8.8
26gb|BC079383.1| Rattus norvegicus TBC1 domain family, member 20, ... 36 8.8
27ref|NM_001004281.1| Rattus norvegicus TBC1 domain family, member... 36 8.8
28emb|X52830.1|MM5BCR Mouse BCR gene promoter region and partial cds 36 8.8
29emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 36 8.8
30gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete se... 36 8.8
31gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 36 8.8
32gb|AC160402.8| Mus musculus 10 BAC RP23-115L17 (Roswell Park Can... 36 8.8
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 36 8.8
34gb|AE004886.1| Pseudomonas aeruginosa PAO1, section 447 of 529 o... 36 8.8
35gb|AE004753.1| Pseudomonas aeruginosa PAO1, section 314 of 529 o... 36 8.8
36dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 36 8.8
37dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 36 8.8
38dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 36 8.8
39dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 8.8
40dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 8.8
41dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 8.8
42gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 36 8.8
43gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 36 8.8
44gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome 36 8.8
45gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, ... 36 8.8
46gb|L10612.1|HUMGIA Human glycosylation-inhibiting factor mRNA, c... 36 8.8
47dbj|AB045630.1| Pseudomonas aeruginosa genes for glutamate-tRNA ... 36 8.8 
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009C07, complete sequence
          Length = 148731

 Score = 40.1 bits (20), Expect = 0.57
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    gcggctgctcagcggcggcg 34
             ||||||||||||||||||||
Sbjct: 98839 gcggctgctcagcggcggcg 98820
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>ref|NM_169222.2| Drosophila melanogaster CG31462-PA (CG31462) mRNA, complete cds
          Length = 3159

 Score = 40.1 bits (20), Expect = 0.57
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 14  ggcggctgctcagcggcggcgcgg 37
           ||||||| ||||||||||||||||
Sbjct: 803 ggcggctcctcagcggcggcgcgg 780
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>gb|AC012646.6|AC012646 Drosophila melanogaster, chromosome 3R, region 85A-85B, BAC clone
              BACR03F16, complete sequence
          Length = 204681

 Score = 40.1 bits (20), Expect = 0.57
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 14     ggcggctgctcagcggcggcgcgg 37
              ||||||| ||||||||||||||||
Sbjct: 200212 ggcggctcctcagcggcggcgcgg 200189
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>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone
             BACR33N15, complete sequence
          Length = 187701

 Score = 40.1 bits (20), Expect = 0.57
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    ggcggctgctcagcggcggcgcgg 37
             ||||||| ||||||||||||||||
Sbjct: 73649 ggcggctcctcagcggcggcgcgg 73626
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 0.57
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 15       gcggctgctcagcggcggcg 34
                ||||||||||||||||||||
Sbjct: 28944546 gcggctgctcagcggcggcg 28944527
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 0.57
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 15      gcggctgctcagcggcggcgcggc 38
               |||||||| |||||||||||||||
Sbjct: 2957682 gcggctgcgcagcggcggcgcggc 2957659
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>gb|AY589580.1| Triticum aestivum beta-expansin TaEXPB3 mRNA, complete cds
          Length = 1013

 Score = 40.1 bits (20), Expect = 0.57
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  cggctgctcagcggcggcgc 35
           ||||||||||||||||||||
Sbjct: 133 cggctgctcagcggcggcgc 114
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>gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16 of 118 of the complete
              sequence
          Length = 244757

 Score = 40.1 bits (20), Expect = 0.57
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     ggcggctgctcagcggcggcgcgg 37
              ||||||| ||||||||||||||||
Sbjct: 188232 ggcggctcctcagcggcggcgcgg 188255
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>gb|AY543541.1| Triticum aestivum expansin EXPB7 mRNA, complete cds
          Length = 1056

 Score = 40.1 bits (20), Expect = 0.57
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 16  cggctgctcagcggcggcgc 35
           ||||||||||||||||||||
Sbjct: 165 cggctgctcagcggcggcgc 146
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 15      gcggctgctcagcggcggcgcgg 37
               |||||||||||||| ||||||||
Sbjct: 5532611 gcggctgctcagcgtcggcgcgg 5532589



 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 21      gctcagcggcggcgcggc 38
               ||||||||||||||||||
Sbjct: 2435877 gctcagcggcggcgcggc 2435860
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 14      ggcggctgctcagcggcggcgcg 36
               ||||| |||||||||||||||||
Sbjct: 1149015 ggcggatgctcagcggcggcgcg 1149037
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>gb|DQ486030.1| Antheraea pernyi nucleopolyhedrovirus, complete genome
          Length = 126479

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    gcggcggcgcggcagaagc 44
             |||||||||||||||||||
Sbjct: 51276 gcggcggcgcggcagaagc 51258
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 18      gctgctcagcggcggcgcg 36
               |||||||||||||||||||
Sbjct: 2656318 gctgctcagcggcggcgcg 2656336
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>emb|BX842575.1| Mycobacterium tuberculosis H37Rv complete genome; segment 4/13
          Length = 349306

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 14     ggcggctgctcagcggcggcgcg 36
              ||||| |||||||||||||||||
Sbjct: 115184 ggcggatgctcagcggcggcgcg 115206
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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 4/14
          Length = 327650

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 14     ggcggctgctcagcggcggcgcg 36
              ||||| |||||||||||||||||
Sbjct: 162418 ggcggatgctcagcggcggcgcg 162440
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>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25,
             complete sequence
          Length = 169168

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    gcgcggcagaagcccggtg 50
             |||||||||||||||||||
Sbjct: 33462 gcgcggcagaagcccggtg 33444
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 16      cggctgctcagcggcggcgcggc 38
               ||||| |||||||||||||||||
Sbjct: 2995450 cggcttctcagcggcggcgcggc 2995472
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 2.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 14      ggcggctgctcagcggcggcgcg 36
               ||||||||||| |||||||||||
Sbjct: 1407897 ggcggctgctcggcggcggcgcg 1407919
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>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence
          Length = 197719

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 38     cagaagcccggtgttctg 55
              ||||||||||||||||||
Sbjct: 146545 cagaagcccggtgttctg 146562
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>gb|AC137586.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0054A16, complete sequence
          Length = 164605

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 21    gctcagcggcggcgcggc 38
             ||||||||||||||||||
Sbjct: 33629 gctcagcggcggcgcggc 33646
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 21      gctcagcggcggcgcggcagaa 42
               |||| |||||||||||||||||
Sbjct: 1220548 gctcggcggcggcgcggcagaa 1220569
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>ref|XM_983863.1| PREDICTED: Mus musculus breakpoint cluster region homolog,
          transcript variant 3 (Bcr), mRNA
          Length = 6533

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 21 gctcagcggcggcgcggc 38
          ||||||||||||||||||
Sbjct: 83 gctcagcggcggcgcggc 66
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>ref|XM_983785.1| PREDICTED: Mus musculus breakpoint cluster region homolog,
          transcript variant 1 (Bcr), mRNA
          Length = 4565

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 21 gctcagcggcggcgcggc 38
          ||||||||||||||||||
Sbjct: 83 gctcagcggcggcgcggc 66
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>ref|XM_898043.2| PREDICTED: Mus musculus breakpoint cluster region homolog,
          transcript variant 2 (Bcr), mRNA
          Length = 6530

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 21 gctcagcggcggcgcggc 38
          ||||||||||||||||||
Sbjct: 83 gctcagcggcggcgcggc 66
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>ref|XM_983429.1| PREDICTED: Mus musculus breakpoint cluster region homolog,
          transcript variant 3 (Bcr), mRNA
          Length = 4564

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                            
Query: 21 gctcagcggcggcgcggc 38
          ||||||||||||||||||
Sbjct: 83 gctcagcggcggcgcggc 66
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>gb|BC079383.1| Rattus norvegicus TBC1 domain family, member 20, mRNA (cDNA clone
           MGC:94895 IMAGE:7111239), complete cds
          Length = 1391

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 10  gggaggcggctgctcagc 27
           ||||||||||||||||||
Sbjct: 980 gggaggcggctgctcagc 997
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>ref|NM_001004281.1| Rattus norvegicus TBC1 domain family, member 20 (Tbc1d20), mRNA
          Length = 1391

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 10  gggaggcggctgctcagc 27
           ||||||||||||||||||
Sbjct: 980 gggaggcggctgctcagc 997
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>emb|X52830.1|MM5BCR Mouse BCR gene promoter region and partial cds
          Length = 1135

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 21  gctcagcggcggcgcggc 38
           ||||||||||||||||||
Sbjct: 951 gctcagcggcggcgcggc 934
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 15     gcggctgctcagcggcgg 32
              ||||||||||||||||||
Sbjct: 241170 gcggctgctcagcggcgg 241153
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>gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete sequence
          Length = 36530

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    gctgctcagcggcggcgc 35
             ||||||||||||||||||
Sbjct: 24214 gctgctcagcggcggcgc 24231
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 13     aggcggctgctcagcggc 30
              ||||||||||||||||||
Sbjct: 756323 aggcggctgctcagcggc 756306
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>gb|AC160402.8| Mus musculus 10 BAC RP23-115L17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 224566

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 21     gctcagcggcggcgcggc 38
              ||||||||||||||||||
Sbjct: 148329 gctcagcggcggcgcggc 148346
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                      
Query: 16       cggctgctcagcggcggcgcgg 37
                ||||||| ||||||||||||||
Sbjct: 27065676 cggctgcgcagcggcggcgcgg 27065655
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>gb|AE004886.1| Pseudomonas aeruginosa PAO1, section 447 of 529 of the complete
            genome
          Length = 10929

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 27   cggcggcgcggcagaagcccgg 48
            ||||| ||||||||||||||||
Sbjct: 1004 cggcgtcgcggcagaagcccgg 983
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>gb|AE004753.1| Pseudomonas aeruginosa PAO1, section 314 of 529 of the complete genome
          Length = 16268

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 17    ggctgctcagcggcggcgcggc 38
             |||||| |||||||||||||||
Sbjct: 11869 ggctgcgcagcggcggcgcggc 11848
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 16      cggctgctcagcggcggc 33
               ||||||||||||||||||
Sbjct: 1970151 cggctgctcagcggcggc 1970168
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1486_E07
          Length = 110494

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 16    cggctgctcagcggcggcgcgg 37
             ||||||| ||||||||||||||
Sbjct: 37325 cggctgcgcagcggcggcgcgg 37304
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>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0461B08
          Length = 153743

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 16     cggctgctcagcggcggcgcgg 37
              ||||||| ||||||||||||||
Sbjct: 118878 cggctgcgcagcggcggcgcgg 118857
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>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full
           insert sequence
          Length = 1128

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 16  cggctgctcagcggcggcgcgg 37
           ||||||| ||||||||||||||
Sbjct: 952 cggctgcgcagcggcggcgcgg 931
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>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full
            insert sequence
          Length = 1205

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 16   cggctgctcagcggcggcgcgg 37
            ||||||| ||||||||||||||
Sbjct: 1007 cggctgcgcagcggcggcgcgg 986
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>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full
           insert sequence
          Length = 1136

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 16  cggctgctcagcggcggcgcgg 37
           ||||||| ||||||||||||||
Sbjct: 952 cggctgcgcagcggcggcgcgg 931
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 19      ctgctcagcggcggcgcg 36
               ||||||||||||||||||
Sbjct: 4014791 ctgctcagcggcggcgcg 4014774
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                  
Query: 21       gctcagcggcggcgcggc 38
                ||||||||||||||||||
Sbjct: 15502766 gctcagcggcggcgcggc 15502783
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>gb|AE009442.1| Xylella fastidiosa Temecula1, complete genome
          Length = 2519802

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 13      aggcggctgctcagcggc 30
               ||||||||||||||||||
Sbjct: 2185855 aggcggctgctcagcggc 2185872
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>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds
          Length = 1140

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 16  cggctgctcagcggcggcgcgg 37
           ||||||| ||||||||||||||
Sbjct: 947 cggctgcgcagcggcggcgcgg 926
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>gb|L10612.1|HUMGIA Human glycosylation-inhibiting factor mRNA, complete cds
          Length = 557

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 21 gctcagcggcggcgcggc 38
          ||||||||||||||||||
Sbjct: 11 gctcagcggcggcgcggc 28
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>dbj|AB045630.1| Pseudomonas aeruginosa genes for glutamate-tRNA synthetase, CbrA,
           CbrB, complete cds
          Length = 6979

 Score = 36.2 bits (18), Expect = 8.8
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 27  cggcggcgcggcagaagcccgg 48
           ||||| ||||||||||||||||
Sbjct: 647 cggcgtcgcggcagaagcccgg 626


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 410,261
Number of Sequences: 3902068
Number of extensions: 410261
Number of successful extensions: 37154
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36151
Number of HSP's gapped (non-prelim): 1003
length of query: 61
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 40
effective length of database: 17,151,101,840
effective search space: 686044073600
effective search space used: 686044073600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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