ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
2dbj|AK100320.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
3dbj|AK062213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
5emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa... 101 2e-18
6gb|AY112473.1| Zea mays CL234_1 mRNA sequence 72 2e-09
7gb|AC113508.14| Mus musculus chromosome 13, clone RP23-376D8, co... 42 1.9
8ref|XM_542713.2| PREDICTED: Canis familiaris similar to Golgi re... 42 1.9
9ref|XM_844821.1| PREDICTED: Canis familiaris similar to Golgi re... 42 1.9
10emb|CR318652.16| Zebrafish DNA sequence from clone CH211-128O18 ... 42 1.9
11gb|AC015864.5| Homo sapiens chromosome 18, clone RP11-54A1, comp... 42 1.9
12ref|XM_690321.1| PREDICTED: Danio rerio similar to genetic suppr... 42 1.9
13ref|XM_688232.1| PREDICTED: Danio rerio similar to genetic suppr... 42 1.9
14emb|BX548023.3| Zebrafish DNA sequence from clone DKEY-265O13 in... 42 1.9
15dbj|AP001169.1| Homo sapiens genomic DNA, chromosome 18q21, dele... 42 1.9
16gb|AC119905.11| Mus musculus chromosome 17, clone RP24-238N14, c... 40 7.6
17ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA 40 7.6
18gb|AC123699.10| Mus musculus chromosome 5, clone RP23-333M22, co... 40 7.6
19gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome... 40 7.6
20emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in ... 40 7.6
21gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 40 7.6
22gb|AY033089.1| Enterococcus casseliflavus vancomycin resistance ... 40 7.6
23emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA s... 40 7.6
24gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, co... 40 7.6
25emb|X12542.1|SCRAD18A S.cerevisiae RAD18 gene 40 7.6
26emb|X12588.1|SCRAD18 Yeast RAD18 gene 40 7.6
27emb|CR352305.6| Zebrafish DNA sequence from clone CH211-95N4 in ... 40 7.6
28gb|AC154750.2| Mus musculus BAC clone RP24-399I16 from chromosom... 40 7.6
29dbj|AK023817.1| Homo sapiens cDNA FLJ13755 fis, clone PLACE3000363 40 7.6
30dbj|AB225133.1| Aspergillus oryzae cDNA, contig sequence: AoEST1984 40 7.6
31gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, co... 40 7.6
32dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 7.6
33gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, comple... 40 7.6
34gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, co... 40 7.6
35emb|BX936295.3| Mouse DNA sequence from clone RP23-256P1 on chro... 40 7.6
36gb|AY033764.1| Enterococcus flavescens vanC-3 vancomycin resista... 40 7.6
37gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, com... 40 7.6
38gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, com... 40 7.6
39gb|M36405.1|YSCRAD18A S.cerevisiae DNA repair protein (RAD18) ge... 40 7.6
40gb|AC169384.2| Mus musculus chromosome 5, clone RP23-231C16, com... 40 7.6
41emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, c... 40 7.6
42emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chro... 40 7.6
43gb|L08252.1|YSCHCM1PA Saccharomyces cerevisiae Hcm1p protein gen... 40 7.6
44dbj|AP000501.1| Homo sapiens genomic DNA, chromosome 8p11.2, clo... 40 7.6 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                            
Query: 352      tccagcttgagcgagttcaaggccattgccgcagacgcttcggtcttctcatttggagac 411
                |||||| |||||||||||||||| ||||| |||||||||||||||||||| || ||||| 
Sbjct: 12366342 tccagcatgagcgagttcaaggcaattgctgcagacgcttcggtcttctcgttcggagat 12366283

                                       
Query: 412      gaagatgactacgaaagcgaata 434
                ||||| ||||| |||||||||||
Sbjct: 12366282 gaagacgactatgaaagcgaata 12366260



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                            
Query: 48       gtccaacaaagaaactggaagtgatgataaggatgatgttttttctgacaatgaagcaga 107
                ||||||||| ||| ||| |||  ||||||||||||| || || ||||||| |||||||||
Sbjct: 12366652 gtccaacaaggaatctgcaaggaatgataaggatgacgtcttctctgacagtgaagcaga 12366593

                                     
Query: 108      agatggatcatccaagggcag 128
                |||||||||||||||||||||
Sbjct: 12366592 agatggatcatccaagggcag 12366572



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 287      ctctcaaaactgaagctagcagcaagagcgactccaccaaagcac 331
                ||||||||| || || |||||||||||||  |||||||| |||||
Sbjct: 12366413 ctctcaaaagtggagttagcagcaagagcagctccaccacagcac 12366369
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>dbj|AK100320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079D17, full
            insert sequence
          Length = 2438

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                        
Query: 352  tccagcttgagcgagttcaaggccattgccgcagacgcttcggtcttctcatttggagac 411
            |||||| |||||||||||||||| ||||| |||||||||||||||||||| || ||||| 
Sbjct: 2104 tccagcatgagcgagttcaaggcaattgctgcagacgcttcggtcttctcgttcggagat 2163

                                   
Query: 412  gaagatgactacgaaagcgaata 434
            ||||| ||||| |||||||||||
Sbjct: 2164 gaagacgactatgaaagcgaata 2186



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                        
Query: 48   gtccaacaaagaaactggaagtgatgataaggatgatgttttttctgacaatgaagcaga 107
            ||||||||| ||| ||| |||  ||||||||||||| || || ||||||| |||||||||
Sbjct: 1794 gtccaacaaggaatctgcaaggaatgataaggatgacgtcttctctgacagtgaagcaga 1853

                                 
Query: 108  agatggatcatccaagggcag 128
            |||||||||||||||||||||
Sbjct: 1854 agatggatcatccaagggcag 1874



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 287  ctctcaaaactgaagctagcagcaagagcgactccaccaaagcac 331
            ||||||||| || || |||||||||||||  |||||||| |||||
Sbjct: 2033 ctctcaaaagtggagttagcagcaagagcagctccaccacagcac 2077
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>dbj|AK062213.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A07, full
            insert sequence
          Length = 1356

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Plus

                                                                        
Query: 352  tccagcttgagcgagttcaaggccattgccgcagacgcttcggtcttctcatttggagac 411
            |||||| |||||||||||||||| ||||| |||||||||||||||||||| || ||||| 
Sbjct: 1019 tccagcatgagcgagttcaaggcaattgctgcagacgcttcggtcttctcgttcggagat 1078

                                   
Query: 412  gaagatgactacgaaagcgaata 434
            ||||| ||||| |||||||||||
Sbjct: 1079 gaagacgactatgaaagcgaata 1101



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Plus

                                                                       
Query: 48  gtccaacaaagaaactggaagtgatgataaggatgatgttttttctgacaatgaagcaga 107
           ||||||||| ||| ||| |||  ||||||||||||| || || ||||||| |||||||||
Sbjct: 709 gtccaacaaggaatctgcaaggaatgataaggatgacgtcttctctgacagtgaagcaga 768

                                
Query: 108 agatggatcatccaagggcag 128
           |||||||||||||||||||||
Sbjct: 769 agatggatcatccaagggcag 789



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 287 ctctcaaaactgaagctagcagcaagagcgactccaccaaagcac 331
           ||||||||| || || |||||||||||||  |||||||| |||||
Sbjct: 948 ctctcaaaagtggagttagcagcaagagcagctccaccacagcac 992
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                            
Query: 352      tccagcttgagcgagttcaaggccattgccgcagacgcttcggtcttctcatttggagac 411
                |||||| |||||||||||||||| ||||| |||||||||||||||||||| || ||||| 
Sbjct: 12320712 tccagcatgagcgagttcaaggcaattgctgcagacgcttcggtcttctcgttcggagat 12320653

                                       
Query: 412      gaagatgactacgaaagcgaata 434
                ||||| ||||| |||||||||||
Sbjct: 12320652 gaagacgactatgaaagcgaata 12320630



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                            
Query: 48       gtccaacaaagaaactggaagtgatgataaggatgatgttttttctgacaatgaagcaga 107
                ||||||||| ||| ||| |||  ||||||||||||| || || ||||||| |||||||||
Sbjct: 12321022 gtccaacaaggaatctgcaaggaatgataaggatgacgtcttctctgacagtgaagcaga 12320963

                                     
Query: 108      agatggatcatccaagggcag 128
                |||||||||||||||||||||
Sbjct: 12320962 agatggatcatccaagggcag 12320942



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 287      ctctcaaaactgaagctagcagcaagagcgactccaccaaagcac 331
                ||||||||| || || |||||||||||||  |||||||| |||||
Sbjct: 12320783 ctctcaaaagtggagttagcagcaagagcagctccaccacagcac 12320739
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>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 163702

 Score =  101 bits (51), Expect = 2e-18
 Identities = 75/83 (90%)
 Strand = Plus / Minus

                                                                         
Query: 352   tccagcttgagcgagttcaaggccattgccgcagacgcttcggtcttctcatttggagac 411
             |||||| |||||||||||||||| ||||| |||||||||||||||||||| || ||||| 
Sbjct: 80707 tccagcatgagcgagttcaaggcaattgctgcagacgcttcggtcttctcgttcggagat 80648

                                    
Query: 412   gaagatgactacgaaagcgaata 434
             ||||| ||||| |||||||||||
Sbjct: 80647 gaagacgactatgaaagcgaata 80625



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                         
Query: 48    gtccaacaaagaaactggaagtgatgataaggatgatgttttttctgacaatgaagcaga 107
             ||||||||| ||| ||| |||  ||||||||||||| || || ||||||| |||||||||
Sbjct: 81017 gtccaacaaggaatctgcaaggaatgataaggatgacgtcttctctgacagtgaagcaga 80958

                                  
Query: 108   agatggatcatccaagggcag 128
             |||||||||||||||||||||
Sbjct: 80957 agatggatcatccaagggcag 80937



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 287   ctctcaaaactgaagctagcagcaagagcgactccaccaaagcac 331
             ||||||||| || || |||||||||||||  |||||||| |||||
Sbjct: 80778 ctctcaaaagtggagttagcagcaagagcagctccaccacagcac 80734
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>gb|AY112473.1| Zea mays CL234_1 mRNA sequence
          Length = 1656

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 131/162 (80%), Gaps = 3/162 (1%)
 Strand = Plus / Plus

                                                                        
Query: 270  ggcacctgacggtatctctctcaaaactgaagctagcagcaagagcgactccaccaaagc 329
            ||||||||| ||||  ||||||||||||||||  |||||||||  |  |||||||| |||
Sbjct: 1240 ggcacctgatggtacatctctcaaaactgaagtcagcagcaaggccagctccaccacagc 1299

                                                                        
Query: 330  acagcctcct---gctatggaatcatccagcttgagcgagttcaaggccattgccgcaga 386
            ||  ||||||   |||   || || |||||| ||||||| |||||||| |||||||||||
Sbjct: 1300 accacctcctccagctgctgactcttccagcatgagcgaattcaaggcgattgccgcaga 1359

                                                      
Query: 387  cgcttcggtcttctcatttggagacgaagatgactacgaaag 428
             || ||||| ||||| || ||||| |||||||| || |||||
Sbjct: 1360 tgcctcggtgttctcgttcggagatgaagatgattatgaaag 1401



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 33   tgctgcacctgcagagtccaacaaagaaactggaag 68
            ||||||||||| ||| |||||||| | |||||||||
Sbjct: 997  tgctgcacctgaagaatccaacaagggaactggaag 1032
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>gb|AC113508.14| Mus musculus chromosome 13, clone RP23-376D8, complete sequence
          Length = 176600

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 11     gcagcaatgccaaggacagca 31
              |||||||||||||||||||||
Sbjct: 109078 gcagcaatgccaaggacagca 109058
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>ref|XM_542713.2| PREDICTED: Canis familiaris similar to Golgi reassembly stacking
            protein 1, transcript variant 1 (LOC485594), mRNA
          Length = 2956

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gaggacgtctccagcagtggt 153
            |||||||||||||||||||||
Sbjct: 1045 gaggacgtctccagcagtggt 1065
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>ref|XM_844821.1| PREDICTED: Canis familiaris similar to Golgi reassembly stacking
            protein 1, transcript variant 2 (LOC485594), mRNA
          Length = 3152

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gaggacgtctccagcagtggt 153
            |||||||||||||||||||||
Sbjct: 1045 gaggacgtctccagcagtggt 1065
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>emb|CR318652.16| Zebrafish DNA sequence from clone CH211-128O18 in linkage group 11,
              complete sequence
          Length = 179522

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 344    tggaatcatccagcttgagcg 364
              |||||||||||||||||||||
Sbjct: 172700 tggaatcatccagcttgagcg 172680
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>gb|AC015864.5| Homo sapiens chromosome 18, clone RP11-54A1, complete sequence
          Length = 177410

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                           
Query: 102    agcagaagatggatcatccaagggcagga 130
              ||||||||||||| |||||||||||||||
Sbjct: 146223 agcagaagatgga-catccaagggcagga 146250
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>ref|XM_690321.1| PREDICTED: Danio rerio similar to genetic suppressor element 1
            (LOC567033), mRNA
          Length = 5017

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 344  tggaatcatccagcttgagcg 364
            |||||||||||||||||||||
Sbjct: 2722 tggaatcatccagcttgagcg 2702
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>ref|XM_688232.1| PREDICTED: Danio rerio similar to genetic suppressor element 1
            (LOC564914), mRNA
          Length = 2424

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 344  tggaatcatccagcttgagcg 364
            |||||||||||||||||||||
Sbjct: 2205 tggaatcatccagcttgagcg 2185
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>emb|BX548023.3| Zebrafish DNA sequence from clone DKEY-265O13 in linkage group 18,
             complete sequence
          Length = 151449

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 344   tggaatcatccagcttgagcg 364
             |||||||||||||||||||||
Sbjct: 94116 tggaatcatccagcttgagcg 94096
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>dbj|AP001169.1| Homo sapiens genomic DNA, chromosome 18q21, deleted region in human
             lung cancer, complete sequence
          Length = 146736

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 102   agcagaagatggatcatccaagggcagga 130
             ||||||||||||| |||||||||||||||
Sbjct: 46823 agcagaagatgga-catccaagggcagga 46796
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>gb|AC119905.11| Mus musculus chromosome 17, clone RP24-238N14, complete sequence
          Length = 179042

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 516  aagcatagttgggaagaatt 535
            ||||||||||||||||||||
Sbjct: 6525 aagcatagttgggaagaatt 6506
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>ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA
          Length = 12715

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   caatgctgcacctgcagagt 49
            ||||||||||||||||||||
Sbjct: 5308 caatgctgcacctgcagagt 5327
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>gb|AC123699.10| Mus musculus chromosome 5, clone RP23-333M22, complete sequence
          Length = 167971

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   ccaagggcaggaaggaggac 138
             ||||||||||||||||||||
Sbjct: 64964 ccaagggcaggaaggaggac 64945
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>gb|AC155823.8| Mus musculus BAC clone RP23-348C5 from chromosome 8, complete sequence
          Length = 219597

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    agcagaagatggatcatcca 121
              ||||||||||||||||||||
Sbjct: 165421 agcagaagatggatcatcca 165402
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>emb|BX927371.12| Zebrafish DNA sequence from clone DKEY-1C17 in linkage group 7,
             complete sequence
          Length = 154034

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   gaaacaagtgttgcacaaca 203
             ||||||||||||||||||||
Sbjct: 94585 gaaacaagtgttgcacaaca 94604
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 440     ctttgcttttgcaggtgttt 459
               ||||||||||||||||||||
Sbjct: 1476417 ctttgcttttgcaggtgttt 1476398
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>gb|AY033089.1| Enterococcus casseliflavus vancomycin resistance gene cluster,
            partial sequence
          Length = 4611

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  tggagcaaatagagccaaag 178
            ||||||||||||||||||||
Sbjct: 1438 tggagcaaatagagccaaag 1419
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>emb|X59720.2|SCCHRIII S.cerevisiae chromosome III complete DNA sequence
          Length = 316613

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     atgataaggatgatgttttt 90
              ||||||||||||||||||||
Sbjct: 230957 atgataaggatgatgttttt 230938
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>gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, complete sequence
          Length = 155807

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   caatgctgcacctgcagagt 49
            ||||||||||||||||||||
Sbjct: 2635 caatgctgcacctgcagagt 2654
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>emb|X12542.1|SCRAD18A S.cerevisiae RAD18 gene
          Length = 2300

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  atgataaggatgatgttttt 90
           ||||||||||||||||||||
Sbjct: 127 atgataaggatgatgttttt 108
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>emb|X12588.1|SCRAD18 Yeast RAD18 gene
          Length = 2471

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  atgataaggatgatgttttt 90
           ||||||||||||||||||||
Sbjct: 126 atgataaggatgatgttttt 107
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>emb|CR352305.6| Zebrafish DNA sequence from clone CH211-95N4 in linkage group 17,
            complete sequence
          Length = 155030

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 529  aagaattgatttatctttgc 548
            ||||||||||||||||||||
Sbjct: 7917 aagaattgatttatctttgc 7936
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>gb|AC154750.2| Mus musculus BAC clone RP24-399I16 from chromosome 17, complete sequence
          Length = 128778

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 516    aagcatagttgggaagaatt 535
              ||||||||||||||||||||
Sbjct: 107774 aagcatagttgggaagaatt 107755
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>dbj|AK023817.1| Homo sapiens cDNA FLJ13755 fis, clone PLACE3000363
          Length = 4348

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   caatgctgcacctgcagagt 49
            ||||||||||||||||||||
Sbjct: 1987 caatgctgcacctgcagagt 2006
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>dbj|AB225133.1| Aspergillus oryzae cDNA, contig sequence: AoEST1984
          Length = 936

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  aatgctgcacctgcagagtc 50
           ||||||||||||||||||||
Sbjct: 359 aatgctgcacctgcagagtc 378
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>gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, complete sequence
          Length = 186783

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    caatgctgcacctgcagagt 49
             ||||||||||||||||||||
Sbjct: 53893 caatgctgcacctgcagagt 53874
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     aatgctgcacctgcagagtc 50
              ||||||||||||||||||||
Sbjct: 819744 aatgctgcacctgcagagtc 819763
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>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence
          Length = 173808

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 518    gcatagttgggaagaattgattta 541
              |||||| |||||||||||||||||
Sbjct: 168436 gcataggtgggaagaattgattta 168459
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>gb|AC100828.2| Homo sapiens chromosome 15, clone RP11-184D12, complete sequence
          Length = 175123

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    cttttgcaggtgtttgattt 464
              ||||||||||||||||||||
Sbjct: 120928 cttttgcaggtgtttgattt 120947
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>emb|BX936295.3| Mouse DNA sequence from clone RP23-256P1 on chromosome 2, complete
             sequence
          Length = 56898

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 86    ttttttctgacaatgaagcagaagatgg 113
             ||||||||||||||||| | ||||||||
Sbjct: 28239 ttttttctgacaatgaatctgaagatgg 28212
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>gb|AY033764.1| Enterococcus flavescens vanC-3 vancomycin resistance gene cluster,
            complete sequence
          Length = 5662

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  tggagcaaatagagccaaag 178
            ||||||||||||||||||||
Sbjct: 2494 tggagcaaatagagccaaag 2475
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>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence
          Length = 190274

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  aagggcaggaaggaggacgt 140
            ||||||||||||||||||||
Sbjct: 5129 aagggcaggaaggaggacgt 5148
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>gb|AC130304.12| Homo sapiens chromosome 8, clone RP11-205M5, complete sequence
          Length = 161953

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    aagggcaggaaggaggacgt 140
              ||||||||||||||||||||
Sbjct: 101353 aagggcaggaaggaggacgt 101372
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>gb|M36405.1|YSCRAD18A S.cerevisiae DNA repair protein (RAD18) gene, complete cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 71  atgataaggatgatgttttt 90
           ||||||||||||||||||||
Sbjct: 127 atgataaggatgatgttttt 108
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>gb|AC169384.2| Mus musculus chromosome 5, clone RP23-231C16, complete sequence
          Length = 204569

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    ccaagggcaggaaggaggac 138
              ||||||||||||||||||||
Sbjct: 198588 ccaagggcaggaaggaggac 198569
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>emb|AL928637.7| Zebrafish DNA sequence from clone CH211-227I6, complete sequence
          Length = 163121

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    gaaacaagtgttgcacaaca 203
              ||||||||||||||||||||
Sbjct: 105763 gaaacaagtgttgcacaaca 105782
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>emb|AL831723.8| Mouse DNA sequence from clone RP23-100C7 on chromosome 4, complete
             sequence
          Length = 171424

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    gcagagtccaacaaagaaac 62
             ||||||||||||||||||||
Sbjct: 26950 gcagagtccaacaaagaaac 26969
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>gb|L08252.1|YSCHCM1PA Saccharomyces cerevisiae Hcm1p protein gene, complete cds
          Length = 1965

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   atgataaggatgatgttttt 90
            ||||||||||||||||||||
Sbjct: 1771 atgataaggatgatgttttt 1752
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>dbj|AP000501.1| Homo sapiens genomic DNA, chromosome 8p11.2, clone:91h23 to 9-41
          Length = 178348

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    aagggcaggaaggaggacgt 140
              ||||||||||||||||||||
Sbjct: 131814 aagggcaggaaggaggacgt 131833


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,615,475
Number of Sequences: 3902068
Number of extensions: 5615475
Number of successful extensions: 111326
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 111153
Number of HSP's gapped (non-prelim): 175
length of query: 562
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 539
effective length of database: 17,143,297,704
effective search space: 9240237462456
effective search space used: 9240237462456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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