ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUBF_BACSU (P16397) Bacillopeptidase F precursor (EC 3.4.21.-) (... 31 0.93
2FA98A_MOUSE (Q3TJZ6) Protein FAM98A 30 1.2
3GR98D_DROME (Q8IMN5) Putative gustatory receptor 98d 29 2.7
4FA98A_HUMAN (Q8NCA5) Protein FAM98A 29 2.7
5FA98A_PONPY (Q5R679) Protein FAM98A 29 2.7
6ZEAD_MAIZE (P24450) Zein-alpha precursor (19 kDa) (PMS2) 29 3.5
7ZEAB_MAIZE (P04705) Zein-alpha precursor (19 kDa) (Clone PZ19.1)... 28 4.6
8ZEA2_MAIZE (P04704) Zein-alpha precursor (19 kDa) (Clone ZG99) 28 4.6
9ZEAL_MAIZE (P04701) Zein-alpha precursor (Clone Z4) 28 4.6
10RABP_XENLA (P50568) Cellular retinoic acid-binding protein (CRAB... 28 6.0
11COTD_BACSU (P07791) Spore coat protein D 28 6.0
12HSP72_DROSI (Q9GSU4) Major heat shock 70 kDa protein Ba (Heat sh... 28 6.0
13ARS2_DROME (Q9V9K7) Arsenite-resistance protein 2 homolog 28 6.0
14NAGH_CLOPE (P26831) Hyalurononglucosaminidase precursor (EC 3.2.... 28 6.0
15PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula... 28 6.0
16DHX9_MOUSE (O70133) ATP-dependent RNA helicase A (EC 3.6.1.-) (N... 28 6.0
17VCO7_ADEG1 (Q89707) Major core protein precursor (Protein VII) (... 28 6.0
18K1C10_MOUSE (P02535) Keratin, type I cytoskeletal 10 (Cytokerati... 28 7.9
19YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I 28 7.9
20SPS_VICFA (Q43876) Sucrose-phosphate synthase (EC 2.4.1.14) (UDP... 28 7.9
21ZEAC_MAIZE (P24449) Zein-alpha precursor (19 kDa) (PMS1) 28 7.9
22ZEA1_MAIZE (P02859) Zein-alpha precursor (19 kDa) (Clone A30) 28 7.9
23TWST1_GORGO (Q8MI06) Twist-related protein 1 28 7.9
24RABP1_FUGRU (O42386) Cellular retinoic acid-binding protein 1 (C... 28 7.9

>SUBF_BACSU (P16397) Bacillopeptidase F precursor (EC 3.4.21.-) (Esterase)|
           (RP-I protease) (90 kDa serine proteinase)
          Length = 1433

 Score = 30.8 bits (68), Expect = 0.93
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 18  DTVDTVVKWKLSYDSHGNVVRKVRVGGEFDSNSDSGRDDKLEPKWRAQNRFSPSE 182
           D +D    W L YD  G VV  +  G E++  +       L+ K+R  N  +P+E
Sbjct: 204 DQIDAPKAWALGYDGTGTVVASIDTGVEWNHPA-------LKEKYRGYNPENPNE 251



to top

>FA98A_MOUSE (Q3TJZ6) Protein FAM98A|
          Length = 515

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
 Frame = +3

Query: 51  SYDSHGNVVRKVRVG-GEFDSNS-DSGRDDKLEPKWRAQNRFSPSENRGGGAGLKYRPNA 224
           SY   G   +  R G G +D      GR +K +  W          + G G+G  Y+  A
Sbjct: 347 SYGGRGGHEQGGRGGRGSYDHGGRGGGRGNKHQGGWT---------DGGSGSGGGYQDGA 397

Query: 225 --NSGERPGGYTKGHNG 269
             +SG +PGGY  GH+G
Sbjct: 398 YRDSGFQPGGYHGGHSG 414



to top

>GR98D_DROME (Q8IMN5) Putative gustatory receptor 98d|
          Length = 412

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -1

Query: 263 MTLGVSSWPLATVGIRPIFQTCSTSPVLTWTKPILS 156
           + L V  W +  VG+ P F   +  P L WT  +L+
Sbjct: 145 LALSVGLWIVLLVGLTPRFTLVALGPYLHWTNKVLT 180



to top

>FA98A_HUMAN (Q8NCA5) Protein FAM98A|
          Length = 519

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 93  GGEFDSNSDSGRDDKLEPKWRAQNRFSPSENRGGGAGLKYRPNANSGERPGGYTKGHN 266
           GG        GR +K +  W            GGG G +     +SG +PGGY  GH+
Sbjct: 365 GGYDHGGRGGGRGNKHQGGWT-------DGGSGGGGGYQDGGYRDSGFQPGGYHGGHS 415



to top

>FA98A_PONPY (Q5R679) Protein FAM98A|
          Length = 518

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 93  GGEFDSNSDSGRDDKLEPKWRAQNRFSPSENRGGGAGLKYRPNANSGERPGGYTKGHN 266
           GG        GR +K +  W            GGG G +     +SG +PGGY  GH+
Sbjct: 364 GGYDHGGRGGGRGNKHQGGWT-------DGGSGGGGGYQDGGYRDSGFQPGGYHGGHS 414



to top

>ZEAD_MAIZE (P24450) Zein-alpha precursor (19 kDa) (PMS2)|
          Length = 233

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 275 FITIMTLGVSSWPLATVGIRPIFQTCSTSPVLTWTKPILSP 153
           F  +M LG+S    A+V    IF  CS +P+ +   P LSP
Sbjct: 6   FCFLMLLGLS----ASVATATIFPQCSQAPIASLLPPYLSP 42



to top

>ZEAB_MAIZE (P04705) Zein-alpha precursor (19 kDa) (Clone PZ19.1) (Fragment)|
          Length = 186

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 275 FITIMTLGVSSWPLATVGIRPIFQTCSTSPVLTWTKPILSP 153
           F  IM LG+S    A+     IF  CS +P+ +   P LSP
Sbjct: 6   FCLIMLLGLS----ASAATASIFPQCSQAPIASLLPPYLSP 42



to top

>ZEA2_MAIZE (P04704) Zein-alpha precursor (19 kDa) (Clone ZG99)|
          Length = 235

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 275 FITIMTLGVSSWPLATVGIRPIFQTCSTSPVLTWTKPILSP 153
           F  IM LG+S    A+     IF  CS +P+ +   P LSP
Sbjct: 6   FCLIMLLGLS----ASAATASIFPQCSQAPIASLLPPYLSP 42



to top

>ZEAL_MAIZE (P04701) Zein-alpha precursor (Clone Z4)|
          Length = 267

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 275 FITIMTLGVSSWPLATVGIRPIFQTCSTSPVLTWTKPILSP 153
           F  IM LG+S    A+     IF  CS +P+ +   P LSP
Sbjct: 6   FCLIMLLGLS----ASAATASIFPQCSQAPIASLLPPYLSP 42



to top

>RABP_XENLA (P50568) Cellular retinoic acid-binding protein (CRABP) (Retinoic|
           acid-binding protein, cellular)
          Length = 137

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +3

Query: 87  RVGGEFDSNSDSGRDDKLEPKWRAQNRFSPSENRGGGAGLK---YRPNANSGE 236
           ++G EFD  +  GR  K   KW ++N+ +  +    G G K    R   N GE
Sbjct: 66  KIGEEFDEQTVDGRPCKSLAKWVSENKMACEQKLLKGDGPKTAWTREMTNDGE 118



to top

>COTD_BACSU (P07791) Spore coat protein D|
          Length = 75

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -3

Query: 144 VPICHPFHCLNLNQIHHQREPFLPH 70
           VP  HP H  N+N  H Q   + PH
Sbjct: 29  VPHIHPQHTTNVNHQHFQHVHYFPH 53



to top

>HSP72_DROSI (Q9GSU4) Major heat shock 70 kDa protein Ba (Heat shock protein|
           Hsp70Ba) (HSP70-87C1)
          Length = 643

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
 Frame = +3

Query: 9   NIEDTVDTVVKWKLSYDSHGNVVRKVRVGGEF-DSNSDSGR---DDKLEPKWR-AQNRFS 173
           N++ +V+     KL      +V+ K      + DSN+ + +   D K+E   R      +
Sbjct: 546 NVKQSVEQAPAGKLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKMEELTRHCSPIMT 605

Query: 174 PSENRGGGAGLKYRPNANSGERPGGYTKGHNG 269
               +G GAG    P AN G++ GG+  G++G
Sbjct: 606 KMHQQGAGAGAAGGPGANCGQQAGGF-GGYSG 636



to top

>ARS2_DROME (Q9V9K7) Arsenite-resistance protein 2 homolog|
          Length = 943

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
 Frame = +3

Query: 78  RKVRVGGEFDSNSDSGRDDK--------LEPKWRAQNRFSPSENRGGGAGLKYRPNANSG 233
           R+ +  GE +S     RDD+           +W  +N F    + GGG G ++RP+ +  
Sbjct: 12  RRDKFRGERESYRTERRDDRRPVGGSAGARDEWAERNPFRGGASAGGG-GARHRPDYSDY 70

Query: 234 ERPG 245
             PG
Sbjct: 71  RGPG 74



to top

>NAGH_CLOPE (P26831) Hyalurononglucosaminidase precursor (EC 3.2.1.35)|
            (Hyaluronidase) (Mu toxin)
          Length = 1628

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 168  FSPSENRGGGAGLKYRPNANSGE 236
            F+PS  R G     Y+PN N+GE
Sbjct: 1240 FAPSNLRDGNLTTSYKPNTNNGE 1262



to top

>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 925

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +3

Query: 174 PSENRGGGAGLKYRPNANSGERPGGYTKGHNGDERG 281
           P E  GGG G  +RP+   G   GG  + H G   G
Sbjct: 772 PHEGPGGGMGGGHRPHEGPGGGMGGGHRPHEGPGGG 807



to top

>DHX9_MOUSE (O70133) ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear DNA|
            helicase II) (NDH II) (DEAH box protein 9) (mHEL-5)
          Length = 1380

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +3

Query: 171  SPSENRG--GGAGLKYRPNANSGERP--GGYTKGHNGDERG 281
            SP+  RG  GG G  YR  +  G R   GG  +G +GD RG
Sbjct: 1307 SPNSYRGNYGGGGGGYRGGSQGGYRNNFGGDYRGSSGDYRG 1347



to top

>VCO7_ADEG1 (Q89707) Major core protein precursor (Protein VII) (pVII)|
          Length = 72

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +3

Query: 171 SPSENRGGGAGLKYRPNAN 227
           SPS+NRG GA ++YR  A+
Sbjct: 6   SPSDNRGWGANMRYRRRAS 24



to top

>K1C10_MOUSE (P02535) Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10)|
           (Keratin-10) (K10) (56 kDa cytokeratin) (Keratin, type I
           cytoskeletal 59 kDa)
          Length = 569

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 156 AQNRFSPSENRGGGAGLKYRPNANSGERPGGY-TKGHNG 269
           +  +FS S + GGG G   R ++  G   GGY ++G +G
Sbjct: 7   SSKQFSSSRSGGGGGGGSVRVSSTRGSLGGGYSSEGFSG 45



to top

>YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I|
          Length = 1325

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 215 PIFQTCSTSPVLTWTKPILSPPFGF 141
           P+F   + +P  T+ KP  +PPF F
Sbjct: 839 PLFNFSADAPTFTFNKPSETPPFSF 863



to top

>SPS_VICFA (Q43876) Sucrose-phosphate synthase (EC 2.4.1.14)|
           (UDP-glucose-fructose-phosphate glucosyltransferase)
          Length = 1059

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
 Frame = +3

Query: 105 DSNSDSGRDDKLEPKWRAQNRFSPSEN-------------RGGGAGLKYRPNANSGERP 242
           + + DSG D+ L+P   A +R +  EN             R GGA  K   N+N+ + P
Sbjct: 712 ERSGDSGNDNSLDPDGNATDRTTKLENAVLSWSKGISKDTRRGGATEKSGQNSNASKFP 770



to top

>ZEAC_MAIZE (P24449) Zein-alpha precursor (19 kDa) (PMS1)|
          Length = 235

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 275 FITIMTLGVSSWPLATVGIRPIFQTCSTSPVLTWTKPILSP 153
           F  +M LG+S    A+     IF  CS +P+ +   P LSP
Sbjct: 6   FCLLMLLGLS----ASAATATIFPQCSQAPIASLLPPYLSP 42



to top

>ZEA1_MAIZE (P02859) Zein-alpha precursor (19 kDa) (Clone A30)|
          Length = 234

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 275 FITIMTLGVSSWPLATVGIRPIFQTCSTSPVLTWTKPILSP 153
           F  +M LG+S    A+     IF  CS +P+ +   P LSP
Sbjct: 6   FCLLMLLGLS----ASAATATIFPQCSQAPIASLLPPYLSP 42



to top

>TWST1_GORGO (Q8MI06) Twist-related protein 1|
          Length = 203

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +3

Query: 99  EFDSNSDSGRDDKLEPKWRAQNRFSP-SENRGGGAGLKYRPNANSGERPGGYTKG--HNG 269
           +  S+  S  DD L       +R  P S  RGG      R +A  G  PGG   G    G
Sbjct: 4   DVSSSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAGGGAGPGGAASGGAGGG 63

Query: 270 DERG 281
           DE G
Sbjct: 64  DEPG 67



to top

>RABP1_FUGRU (O42386) Cellular retinoic acid-binding protein 1 (Cellular|
           retinoic acid-binding protein I) (CRABP-I) (Retinoic
           acid-binding protein I, cellular)
          Length = 136

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 90  VGGEFDSNSDSGRDDKLEPKWRAQNRFSPSENRGGGAGLK 209
           +G EFD  +  GR  K  P W ++N+    +    G G K
Sbjct: 67  IGEEFDEETVDGRKCKSLPTWESENKIRCKQTLVEGDGPK 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,535,533
Number of Sequences: 219361
Number of extensions: 992765
Number of successful extensions: 3213
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3205
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top