Clone Name | basd2e07 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466278.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 46.1 bits (23), Expect = 0.059 Identities = 32/35 (91%) Strand = Plus / Plus Query: 102 tttgattcaaattcagacagtggaagggatgacaa 136 |||| |||||||||||||||||||| |||| |||| Sbjct: 1270 tttggttcaaattcagacagtggaatggatcacaa 1304
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.059 Identities = 32/35 (91%) Strand = Plus / Minus Query: 102 tttgattcaaattcagacagtggaagggatgacaa 136 |||| |||||||||||||||||||| |||| |||| Sbjct: 21440411 tttggttcaaattcagacagtggaatggatcacaa 21440377
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 46.1 bits (23), Expect = 0.059 Identities = 32/35 (91%) Strand = Plus / Minus Query: 102 tttgattcaaattcagacagtggaagggatgacaa 136 |||| |||||||||||||||||||| |||| |||| Sbjct: 35338 tttggttcaaattcagacagtggaatggatcacaa 35304
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 46.1 bits (23), Expect = 0.059 Identities = 32/35 (91%) Strand = Plus / Minus Query: 102 tttgattcaaattcagacagtggaagggatgacaa 136 |||| |||||||||||||||||||| |||| |||| Sbjct: 100364 tttggttcaaattcagacagtggaatggatcacaa 100330
>gb|BC060494.1| Xenopus laevis hypothetical protein MGC68827, mRNA (cDNA clone MGC:68827 IMAGE:4633786), complete cds Length = 3061 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 tcaaattcagacagtggaaggg 129 |||||||||||||||||||||| Sbjct: 602 tcaaattcagacagtggaaggg 623
>gb|AC004763.1| Homo sapiens chromosome 5, P1 clone 854b11 (LBNL H44), complete sequence Length = 87050 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 aagtgagaacaggggaggtg 195 |||||||||||||||||||| Sbjct: 4057 aagtgagaacaggggaggtg 4076
>gb|AY510087.1| Staphylococcus capitis serine-aspartate repeat family protein (sdrZL) gene, complete cds Length = 1698 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 tgattcaaattcagacagtg 123 |||||||||||||||||||| Sbjct: 471 tgattcaaattcagacagtg 490
>emb|AL354981.41| Human DNA sequence from clone RP11-696J10 on chromosome 9 Contains part of the ASTN2 gene for astrotactin 2 (KIAA0634), complete sequence Length = 117488 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gattcaaattcagacagtgg 124 |||||||||||||||||||| Sbjct: 57756 gattcaaattcagacagtgg 57775
>emb|AL136970.8| Human DNA sequence from clone RP1-238D4 on chromosome 6 Contains part of the ME1 gene for malic enzyme 1 (NADP-dependent, cytosolic), complete sequence Length = 43983 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aaggaatatagaggacacag 24 |||||||||||||||||||| Sbjct: 16590 aaggaatatagaggacacag 16609
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence Length = 1440588 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 ttcaaattcagacagtggaa 126 |||||||||||||||||||| Sbjct: 1184743 ttcaaattcagacagtggaa 1184724
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tggcaatgtggtaagaaagg 84 |||||||||||||||||||| Sbjct: 2753003 tggcaatgtggtaagaaagg 2752984
>gb|AC002428.1|AC002428 Human BAC clone GS1-39E22 from 5q31, complete sequence Length = 143875 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 aagtgagaacaggggaggtg 195 |||||||||||||||||||| Sbjct: 64211 aagtgagaacaggggaggtg 64230
>dbj|AB007546.1| Homo sapiens gene for LECT2, complete cds Length = 11134 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 aagtgagaacaggggaggtg 195 |||||||||||||||||||| Sbjct: 1460 aagtgagaacaggggaggtg 1479 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,718,158 Number of Sequences: 3902068 Number of extensions: 2718158 Number of successful extensions: 52039 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51996 Number of HSP's gapped (non-prelim): 43 length of query: 281 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 259 effective length of database: 17,147,199,772 effective search space: 4441124740948 effective search space used: 4441124740948 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)