ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZG14_PONPY (Q5RA17) Gastric cancer antigen Zg14 homolog 92 3e-19
2ZG14_HUMAN (Q9Y3A4) Gastric cancer antigen Zg14 91 9e-19
3ZG14_MOUSE (Q9D1C9) Gastric cancer antigen Zg14 homolog 87 8e-18
4XYNX_CLOTM (P38535) Exoglucanase xynX precursor (EC 3.2.1.91) (E... 30 2.0
5AOTC_XANAC (Q8PK25) N-acetylornithine carbamoyltransferase (EC 2... 29 3.4
6XYND_PAEPO (P45796) Endo-1,4-beta-xylanase D precursor (EC 3.2.1... 29 3.4
7Y2058_BRAJA (Q9AMW4) Putative cysteine protease yopT-like blr205... 29 3.4
8Y521_HAEIN (P44744) Protein HI0521 28 4.4
9MURB_RICCN (Q92IT8) UDP-N-acetylenolpyruvoylglucosamine reductas... 28 4.4
10YZFA_ECOLI (P08339) Very hypothetical 10.6 kDa protein in msrA-c... 28 5.7
11AOTC_XANCP (Q8P8J2) N-acetylornithine carbamoyltransferase (EC 2... 28 5.7
12XYNA_THESA (P36917) Endo-1,4-beta-xylanase A precursor (EC 3.2.1... 28 5.7
13PEX5_CANGA (Q6FM42) Peroxisomal targeting signal receptor (Perox... 28 7.5
14PYRG_STAS1 (Q49Z73) CTP synthase (EC 6.3.4.2) (UTP--ammonia liga... 28 7.5
15GLND_VIBF1 (Q9XC07) [Protein-PII] uridylyltransferase (EC 2.7.7.... 28 7.5
16MURB_RICPR (Q9ZDS7) UDP-N-acetylenolpyruvoylglucosamine reductas... 28 7.5
17IGF1R_RAT (P24062) Insulin-like growth factor 1 receptor precurs... 27 9.8
18IGF1R_PIG (Q29000) Insulin-like growth factor 1 receptor (EC 2.7... 27 9.8
19IGF1R_BOVIN (Q05688) Insulin-like growth factor 1 receptor precu... 27 9.8
20IGF1R_HUMAN (P08069) Insulin-like growth factor 1 receptor precu... 27 9.8
21YHG3_YEAST (P38756) Protein YHR003C 27 9.8
22GLND_VIBVY (Q7MIF8) [Protein-PII] uridylyltransferase (EC 2.7.7.... 27 9.8
23GLND_VIBVU (Q8DBG3) [Protein-PII] uridylyltransferase (EC 2.7.7.... 27 9.8
24IGF1R_MOUSE (Q60751) Insulin-like growth factor 1 receptor precu... 27 9.8
25SRE8_CAEEL (Q20249) Serpentine receptor class epsilon-8 (Protein... 27 9.8

>ZG14_PONPY (Q5RA17) Gastric cancer antigen Zg14 homolog|
          Length = 280

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 45/108 (41%), Positives = 71/108 (65%)
 Frame = +2

Query: 2   KERLSQIFTSCSPVEXIELQDKPXPSEAQSSAFSKHFGLKHLNGFKVAYVXFKHPSGVQA 181
           +E LS++ +SC P++ +ELQ+KP  +++   + SK F  K + GF+V YV F+ PSGV A
Sbjct: 72  EESLSRLLSSCGPLQSVELQEKPDLADSPKESRSKFFHPKPVPGFRVGYVVFQKPSGVSA 131

Query: 182 FKSFKVKKPVVLSGVGHSIKTGINKWIDNYQASLTDVAELQAEVDEFM 325
             +  ++ P+++S   H +KTGI+KWI +Y  S+ D   L+ EVD FM
Sbjct: 132 --ALALQGPLLVSTESHPVKTGIHKWISDYADSVPDPEALRVEVDTFM 177



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>ZG14_HUMAN (Q9Y3A4) Gastric cancer antigen Zg14|
          Length = 280

 Score = 90.5 bits (223), Expect = 9e-19
 Identities = 46/108 (42%), Positives = 71/108 (65%)
 Frame = +2

Query: 2   KERLSQIFTSCSPVEXIELQDKPXPSEAQSSAFSKHFGLKHLNGFKVAYVXFKHPSGVQA 181
           +E LS++ ++C  V+ +ELQ+KP  +E+   + SK F  K + GF+VAYV F+ PSGV A
Sbjct: 72  EESLSRLLSTCGLVQSVELQEKPDLAESPKESRSKFFHPKPVPGFQVAYVVFQKPSGVSA 131

Query: 182 FKSFKVKKPVVLSGVGHSIKTGINKWIDNYQASLTDVAELQAEVDEFM 325
             +  +K P+++S   H +K+GI+KWI +Y  S+ D   L+ EVD FM
Sbjct: 132 --ALALKGPLLVSTESHPVKSGIHKWISDYADSVPDPEALRVEVDTFM 177



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>ZG14_MOUSE (Q9D1C9) Gastric cancer antigen Zg14 homolog|
          Length = 280

 Score = 87.4 bits (215), Expect = 8e-18
 Identities = 44/108 (40%), Positives = 70/108 (64%)
 Frame = +2

Query: 2   KERLSQIFTSCSPVEXIELQDKPXPSEAQSSAFSKHFGLKHLNGFKVAYVXFKHPSGVQA 181
           +E LS+  + C  ++ +ELQ+KP  +E+ +   S+ F  K + GF+VAYV F+ PSGV A
Sbjct: 72  QESLSRCLSCCGTIKTVELQEKPDLAESPTEPKSQFFHPKPVPGFQVAYVVFQKPSGVSA 131

Query: 182 FKSFKVKKPVVLSGVGHSIKTGINKWIDNYQASLTDVAELQAEVDEFM 325
             +  +K P+++S   H +K+GI+KWI +Y+ S+ D   L+ EVD FM
Sbjct: 132 --ALNLKGPLLVSTESHLVKSGIHKWISDYEDSVLDPEALRMEVDAFM 177



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>XYNX_CLOTM (P38535) Exoglucanase xynX precursor (EC 3.2.1.91)|
           (Exocellobiohydrolase) (1,4-beta-cellobiohydrolase)
          Length = 1087

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 209 VVLSGVGHSIKTGINKWIDNYQASLTDVAELQAEV 313
           V +SG+G  +   IN  IDN +AS+  +A L  E+
Sbjct: 414 VPISGIGMQMHININSNIDNIKASIEKLASLGVEI 448



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>AOTC_XANAC (Q8PK25) N-acetylornithine carbamoyltransferase (EC 2.1.3.9)|
           (AOTCase)
          Length = 343

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
 Frame = +2

Query: 2   KERLSQI---FTSCSPVEXIELQDKPXPSE--AQSSAFSKHFGLKHLNGFKVAYVXFKHP 166
           K+R  Q+   F   SPV  I ++    P +  A + A  +HFG + L G K       HP
Sbjct: 122 KDREDQVLKSFAKYSPVPVINMETITHPCQELAHALALQEHFGTQDLRGKKYVLTWTYHP 181



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>XYND_PAEPO (P45796) Endo-1,4-beta-xylanase D precursor (EC 3.2.1.8) (Xylanase|
           D) (1,4-beta-D-xylan xylanohydrolase D)
          Length = 635

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
 Frame = +2

Query: 137 KVAYVXFKHPSGVQAFKSFKVKKPVVLSGVG----HSIKTGINKWIDNYQASLTDVAELQ 304
           ++ Y+   +P G   +K   +K P    GVG    H++    N+W   Y A     A++ 
Sbjct: 279 EIGYMVSDNPMGPFTYKGHFLKNPYTFFGVGGNNHHAVFNFKNEWYVVYHAQTVSKAQIG 338

Query: 305 A 307
           A
Sbjct: 339 A 339



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>Y2058_BRAJA (Q9AMW4) Putative cysteine protease yopT-like blr2058 (EC 3.4.22.-)|
          Length = 298

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 123 CFSPKCLENALDXASEGXGLSCSSIXSTGEQDV 25
           CFS     +A+D +S   GLS SS+ S+ E  V
Sbjct: 52  CFSKPHTSDAIDDSSNTSGLSTSSLSSSSELSV 84



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>Y521_HAEIN (P44744) Protein HI0521|
          Length = 514

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 97  CTGLXLRRPWFIL*LYRLHWRAGCEYLGQP 8
           C G  + RP +IL  Y ++ + GCE+L  P
Sbjct: 59  CEGYAIYRPRYILPDYNVYIQKGCEFLELP 88



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>MURB_RICCN (Q92IT8) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 295

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
 Frame = +2

Query: 98  FSKHFGLKHLNGFKV---AYVXFKHPSGVQAFKSF----KVKKPVVLSGVGHSI 238
           + K + LKHL  FKV   A + FK P   +  KSF    K K P+   G G +I
Sbjct: 11  YKKDYNLKHLTWFKVGGNAEIFFK-PLDSEDLKSFLIQNKQKLPIKTFGAGSNI 63



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>YZFA_ECOLI (P08339) Very hypothetical 10.6 kDa protein in msrA-chpBI region|
          Length = 89

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -3

Query: 178 LNSRRVFKXNIXHFKAIEM---LQSKVFGECTGLXLRRPWFIL*LYRLHWRAGCEY 20
           L SRR F+  + H + ++    + S+   E TG  + RPW      R  WR  C+Y
Sbjct: 9   LTSRR-FQLALIHRRVVDKRTSMHSRTASESTGARIHRPWCARHQVRPAWR--CQY 61



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>AOTC_XANCP (Q8P8J2) N-acetylornithine carbamoyltransferase (EC 2.1.3.9)|
           (AOTCase)
          Length = 339

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
 Frame = +2

Query: 2   KERLSQI---FTSCSPVEXIELQDKPXPSE--AQSSAFSKHFGLKHLNGFKVAYVXFKHP 166
           K+R  Q+   F   SPV  I ++    P +  A + A  +HFG   L G K       HP
Sbjct: 122 KDREDQVLKSFAKYSPVPVINMETITHPCQELAHALALQEHFGTPDLRGKKYVLTWTYHP 181



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>XYNA_THESA (P36917) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A)
          Length = 1157

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 209 VVLSGVGHSIKTGINKWIDNYQASLTDVAELQAEV 313
           V + G+G  +   IN  IDN +AS+  +A L  E+
Sbjct: 562 VPIDGIGMQMHININSNIDNIKASIEKLASLGVEI 596



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>PEX5_CANGA (Q6FM42) Peroxisomal targeting signal receptor (Peroxin-5) (PTS1|
           receptor)
          Length = 590

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +2

Query: 119 KHLNGFKVAYVXFK-HPSGVQAFKSFKVKKPVVLSGVGHSIKTGINKWIDNYQASLTDVA 295
           K LNG        K  P+ ++A K+  +    +  G   S    +N+W D       + A
Sbjct: 335 KELNGMSALETCLKLDPNNLEAMKNLAIS--YINEGYDMSAYNMLNRWADTKYPGFYNSA 392

Query: 296 ELQAEVDE 319
           EL+ + DE
Sbjct: 393 ELEGKRDE 400



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>PYRG_STAS1 (Q49Z73) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP|
           synthetase)
          Length = 536

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 215 LSGVGHSIKTGIN-KWIDNYQASLTDVAELQAEVD 316
           L   G+  K  I  KWID+ + +  +VAE+ AEVD
Sbjct: 314 LKHAGYPFKKDIEVKWIDSSEVTDENVAEILAEVD 348



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>GLND_VIBF1 (Q9XC07) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 873

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +2

Query: 116 LKHLNGFKVAYVXFKHPSGVQAFKSFKVKKPVVLSGVGHSIKTG 247
           LKH+N F       KHP   + F     K+ ++++ + H I  G
Sbjct: 459 LKHINKFSDTTNRDKHPICCEIFPKIMKKELLIIAAIFHDIAKG 502



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>MURB_RICPR (Q9ZDS7) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 295

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
 Frame = +2

Query: 98  FSKHFGLKHLNGFKV---AYVXFKHPSGVQAFKSF----KVKKPVVLSGVGHSI 238
           + K + LKHL  FKV   A + FK P      KSF    K K P+   G G +I
Sbjct: 11  YKKDYNLKHLTWFKVGGNAEIFFK-PFDFADLKSFLIQNKQKLPITTFGSGSNI 63



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>IGF1R_RAT (P24062) Insulin-like growth factor 1 receptor precursor (EC|
           2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I
           receptor) [Contains: Insulin-like growth factor 1
           receptor alpha chain; Insulin-like growth factor 1
           receptor beta chain]
          Length = 1370

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 243 VFIEWPTPDNTTGFLTLKDLK 181
           +F++WP P+N  G + + ++K
Sbjct: 849 IFLKWPEPENPNGLILMYEIK 869



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>IGF1R_PIG (Q29000) Insulin-like growth factor 1 receptor (EC 2.7.10.1)|
           (Insulin-like growth factor I receptor) (IGF-I receptor)
           (Fragments)
          Length = 304

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 243 VFIEWPTPDNTTGFLTLKDLK 181
           +F++WP P+N  G + + ++K
Sbjct: 63  IFLKWPEPENPNGLILMYEIK 83



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>IGF1R_BOVIN (Q05688) Insulin-like growth factor 1 receptor precursor (EC|
           2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I
           receptor) [Contains: Insulin-like growth factor 1
           receptor alpha chain; Insulin-like growth factor 1
           receptor beta chain] (F
          Length = 640

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 243 VFIEWPTPDNTTGFLTLKDLK 181
           +F++WP P+N  G + + ++K
Sbjct: 121 IFLKWPEPENPNGLILMYEIK 141



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>IGF1R_HUMAN (P08069) Insulin-like growth factor 1 receptor precursor (EC|
           2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I
           receptor) (CD221 antigen) [Contains: Insulin-like growth
           factor 1 receptor alpha chain; Insulin-like growth
           factor 1 recepto
          Length = 1367

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 243 VFIEWPTPDNTTGFLTLKDLK 181
           +F++WP P+N  G + + ++K
Sbjct: 848 IFLKWPEPENPNGLILMYEIK 868



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>YHG3_YEAST (P38756) Protein YHR003C|
          Length = 429

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 191 FKVKKPVVLSGVGHSIKTGINKWIDNYQASLTDVAELQAEVDE 319
           F+ K P+     G+S K  + KW  N + SLT+V  +  E  E
Sbjct: 355 FRGKSPIS----GYSTKLALTKWEANKEISLTNVVLMTKEEQE 393



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>GLND_VIBVY (Q7MIF8) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 873

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 116 LKHLNGFKVAYVXFKHPSGVQAFKSFKVKKPVVLSGVGHSIKTG 247
           L H+N F  A    KHP   + +   + K+ ++L+ + H I  G
Sbjct: 459 LNHINTFSYAKNHDKHPICCEVYPRLQKKELLLLAAIFHDIGKG 502



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>GLND_VIBVU (Q8DBG3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 873

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 116 LKHLNGFKVAYVXFKHPSGVQAFKSFKVKKPVVLSGVGHSIKTG 247
           L H+N F  A    KHP   + +   + K+ ++L+ + H I  G
Sbjct: 459 LNHINTFSYAKNHDKHPICCEVYPRLQKKELLLLAAIFHDIGKG 502



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>IGF1R_MOUSE (Q60751) Insulin-like growth factor 1 receptor precursor (EC|
           2.7.10.1) (Insulin-like growth factor I receptor) (IGF-I
           receptor) [Contains: Insulin-like growth factor 1
           receptor alpha chain; Insulin-like growth factor 1
           receptor beta chain]
          Length = 1373

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -1

Query: 243 VFIEWPTPDNTTGFLTLKDLK 181
           +F++WP P+N  G + + ++K
Sbjct: 849 IFLKWPEPENPNGLILMYEIK 869



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>SRE8_CAEEL (Q20249) Serpentine receptor class epsilon-8 (Protein sre-8)|
          Length = 341

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -3

Query: 313 YFSLQFCNIRXRCLIIIYPLVNSGFYRMANS*QHNWFL--NFKR 188
           Y    FC++  RC+I+   L N       N+  HNW L  NF R
Sbjct: 71  YGGQYFCSMLSRCIIVYQQLGND-----PNNDLHNWILVANFAR 109


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,479,005
Number of Sequences: 219361
Number of extensions: 678433
Number of successful extensions: 1603
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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