Clone Name | basd2d23 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_194132.2| Oryza sativa (japonica cultivar-group), mRNA Length = 559 Score = 266 bits (134), Expect = 6e-68 Identities = 203/226 (89%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||||||||| | |||||||| ||||||||||||||||||||| | |||||| || Sbjct: 109 gggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaacaa 168 Query: 61 gggcggcaaggggagccagctcgaggccaacaagaaggccatgaacatccagtgcaagat 120 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 169 gggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaagat 228 Query: 121 atgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggagcacgccgaggc 180 ||||||||||||||||||||||||||||||||| | |||||||| ||||| || ||||| Sbjct: 229 atgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgaggc 288 Query: 181 gaagcatccgaagagcgaccttgtccagtgcttcccccacctcaag 226 ||||||||||||||||||||| | ||||||||| ||||||||| Sbjct: 289 gaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaag 334
>dbj|AK062043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A07, full insert sequence Length = 559 Score = 266 bits (134), Expect = 6e-68 Identities = 203/226 (89%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||||||||| | |||||||| ||||||||||||||||||||| | |||||| || Sbjct: 109 gggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaacaa 168 Query: 61 gggcggcaaggggagccagctcgaggccaacaagaaggccatgaacatccagtgcaagat 120 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 169 gggcgccaaggggagccagcttgaggccaacaagaaggccatgaacatccagtgcaagat 228 Query: 121 atgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggagcacgccgaggc 180 ||||||||||||||||||||||||||||||||| | |||||||| ||||| || ||||| Sbjct: 229 atgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagagcatgctgaggc 288 Query: 181 gaagcatccgaagagcgaccttgtccagtgcttcccccacctcaag 226 ||||||||||||||||||||| | ||||||||| ||||||||| Sbjct: 289 gaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaag 334
>gb|AY107008.1| Zea mays PCO148957 mRNA sequence Length = 672 Score = 234 bits (118), Expect = 2e-58 Identities = 199/226 (88%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||||||||||| |||||||||||||||||| | ||||||||| ||||||| || Sbjct: 110 gggcggcggcaacggccagaagtccaagatggcgcgcgagaggaacgccgagaagaacaa 169 Query: 61 gggcggcaaggggagccagctcgaggccaacaagaaggccatgaacatccagtgcaagat 120 ||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 170 gggcggcaaaggcagccagctggaggccaacaagaaggccatgaacatccagtgcaagat 229 Query: 121 atgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggagcacgccgaggc 180 ||||||||||| ||||||||||||||||| || || |||||||| || || || ||||| Sbjct: 230 ctgcatgcagaccttcatctgcaccacctccgaggccaagtgcaaagaacatgcggaggc 289 Query: 181 gaagcatccgaagagcgaccttgtccagtgcttcccccacctcaag 226 || |||||| |||| |||||| |||||||||||||||||||||| Sbjct: 290 gaggcatcccaagaacgacctctaccagtgcttcccccacctcaag 335
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct: 797600 cagtgcaagatatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagag 797659 Query: 170 cacgccgaggcgaagcatccgaagagcgaccttgtccagtgcttcccccacctcaag 226 || || |||||||||||||||||||||||||| | ||||||||| ||||||||| Sbjct: 797660 catgctgaggcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaag 797716 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 71 gggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 796779 gggagccagcttgaggccaacaagaaggccatgaacatccag 796820 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||||||||| | |||||||| ||||||||||||||||||||| | |||||| || Sbjct: 796574 gggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaacaa 796633 Query: 61 gggcggcaaggg 72 ||||| |||||| Sbjct: 796634 gggcgccaaggg 796645
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 137 bits (69), Expect = 4e-29 Identities = 105/117 (89%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| Sbjct: 117407 cagtgcaagatatgcatgcagactttcatctgcaccacctctgagaccaagtgcaaagag 117466 Query: 170 cacgccgaggcgaagcatccgaagagcgaccttgtccagtgcttcccccacctcaag 226 || || |||||||||||||||||||||||||| | ||||||||| ||||||||| Sbjct: 117467 catgctgaggcgaagcatccgaagagcgacctcaccgcgtgcttccctcacctcaag 117523 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 71 gggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 116586 gggagccagcttgaggccaacaagaaggccatgaacatccag 116627 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||||||||| | |||||||| ||||||||||||||||||||| | |||||| || Sbjct: 116381 gggcggcggcaatgggcagaagtcgaagatggcgagggagaggaacatggagaagaacaa 116440 Query: 61 gggcggcaaggg 72 ||||| |||||| Sbjct: 116441 gggcgccaaggg 116452
>gb|AY107168.1| Zea mays PCO087750 mRNA sequence Length = 922 Score = 135 bits (68), Expect = 2e-28 Identities = 191/232 (82%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||| ||||||| ||||||||||||||||| | ||| | ||| | |||||| || Sbjct: 322 gggcggtggcaacggccagaagtccaagatggcccgcgagcgcaacttggagaagaacaa 381 Query: 61 gggcggcaaggggagccagctcgaggccaacaagaaggccatgaacatccagtgcaagat 120 ||| | ||||||||||||||||||| |||||||||||||||||| |||||||||||| | Sbjct: 382 gggggccaaggggagccagctcgagaccaacaagaaggccatgagcatccagtgcaaagt 441 Query: 121 atgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggagcacgccgaggc 180 |||||||| || ||||| || ||||| |||||| |||||| ||||||||||||||| Sbjct: 442 gtgcatgcaaacattcatgtgtaccacgactgaagtgaagtgccgggagcacgccgaggc 501 Query: 181 gaagcatccgaagagcgaccttgtccagtgcttcccccacctcaagcagtga 232 |||||||| |||| ||| | ||||||||||||||| || ||| ||||| Sbjct: 502 caagcatcccaagacagacgtgtaccagtgcttcccccatctgaagaagtga 553
>gb|BT016277.1| Zea mays clone Contig110 mRNA sequence Length = 644 Score = 131 bits (66), Expect = 2e-27 Identities = 180/218 (82%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||| ||||||| ||||||||||||||||| | ||| | ||| | |||||| || Sbjct: 126 gggcggtggcaacggccagaagtccaagatggcccgcgagcgcaacttggagaagaacaa 185 Query: 61 gggcggcaaggggagccagctcgaggccaacaagaaggccatgaacatccagtgcaagat 120 ||| | ||||||||||||||||||| |||||||||||||||||| |||||||||||| | Sbjct: 186 gggggccaaggggagccagctcgagaccaacaagaaggccatgagcatccagtgcaaagt 245 Query: 121 atgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggagcacgccgaggc 180 |||||||| || ||||| || ||||| |||||| |||||| ||||||||||||||| Sbjct: 246 gtgcatgcaaacattcatgtgtaccacgactgaagtgaagtgccgggagcacgccgaggc 305 Query: 181 gaagcatccgaagagcgaccttgtccagtgcttccccc 218 |||||||| |||| ||| | |||||||||||||| Sbjct: 306 caagcatcccaagacagacgtgtaccagtgcttccccc 343
>ref|XM_468864.1| Oryza sativa (japonica cultivar-group), mRNA Length = 404 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||||||||||| |||||||||| |||||| | ||| | ||| | |||||| || Sbjct: 94 gggcggcggcaacgggcagaagtccaggatggcccgcgagcgcaacatggagaaggccaa 153 Query: 61 gggcggcaaggggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||| ||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 154 gggcgccaaggggagccagcttgagaccaacaagaaggccatgaacatccag 205
>ref|XM_468863.1| Oryza sativa (japonica cultivar-group), mRNA Length = 551 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||||||||||| |||||||||| |||||| | ||| | ||| | |||||| || Sbjct: 131 gggcggcggcaacgggcagaagtccaggatggcccgcgagcgcaacatggagaaggccaa 190 Query: 61 gggcggcaaggggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||| ||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 191 gggcgccaaggggagccagcttgagaccaacaagaaggccatgaacatccag 242
>dbj|AK066154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056J04, full insert sequence Length = 683 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||||||||||| |||||||||| |||||| | ||| | ||| | |||||| || Sbjct: 140 gggcggcggcaacgggcagaagtccaggatggcccgcgagcgcaacatggagaaggccaa 199 Query: 61 gggcggcaaggggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||| ||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 200 gggcgccaaggggagccagcttgagaccaacaagaaggccatgaacatccag 251
>dbj|AK058503.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F08, full insert sequence Length = 757 Score = 95.6 bits (48), Expect = 1e-16 Identities = 96/112 (85%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaa 60 |||||||||||||| |||||||||| |||||| | ||| | ||| | |||||| || Sbjct: 106 gggcggcggcaacgggcagaagtccaggatggcccgcgagcgcaacatggagaaggccaa 165 Query: 61 gggcggcaaggggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||| ||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 166 gggcgccaaggggagccagcttgagaccaacaagaaggccatgaacatccag 217
>gb|BT013724.1| Lycopersicon esculentum clone 132575F, mRNA sequence Length = 577 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 8 ggcaacgctcagaagtccaagatggcgagggagaggaacctcgagaagctgaagggcggc 67 ||||||| |||||| | |||||||| |||||||||| || |||||||||||||| | Sbjct: 114 ggcaacggtcagaaagcgaagatggctcgggagaggaatctggagaagctgaagggtgct 173 Query: 68 aaggggagccagctcgaggccaacaagaaggccatgaacatccagtgcaagatatgcatg 127 || || || |||||||| | ||||| ||||||||||| |||||||||||| |||| ||| Sbjct: 174 aaaggaagtcagctcgatacgaacaaaaaggccatgaatatccagtgcaaggtatgtatg 233 Query: 128 cagac 132 ||||| Sbjct: 234 cagac 238
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 71 gggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 18392055 gggagccagcttgagaccaacaagaaggccatgaacatccag 18392096 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggc 33 |||||||||||||| |||||||||| |||||| Sbjct: 18391863 gggcggcggcaacgggcagaagtccaggatggc 18391895
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 71 gggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 158486 gggagccagcttgagaccaacaagaaggccatgaacatccag 158527 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggc 33 |||||||||||||| |||||||||| |||||| Sbjct: 158294 gggcggcggcaacgggcagaagtccaggatggc 158326
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 71 gggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 18386096 gggagccagcttgagaccaacaagaaggccatgaacatccag 18386137 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1 gggcggcggcaacgctcagaagtccaagatggc 33 |||||||||||||| |||||||||| |||||| Sbjct: 18385904 gggcggcggcaacgggcagaagtccaggatggc 18385936
>gb|AC097367.3| Oryza sativa chromosome 3 BAC OSJNBa0051C19 genomic sequence, complete sequence Length = 90673 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 71 gggagccagctcgaggccaacaagaaggccatgaacatccag 112 ||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 89160 gggagccagcttgagaccaacaagaaggccatgaacatccag 89119 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 1 gggcggcggcaacgctcagaagtccaagatggc 33 |||||||||||||| |||||||||| |||||| Sbjct: 89352 gggcggcggcaacgggcagaagtccaggatggc 89320
>ref|NM_127873.3| Arabidopsis thaliana unknown protein AT2G23090 mRNA, complete cds Length = 580 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 251 cagtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagtgaaatgcagggag 310 Query: 170 cacgccgaggcgaagcatccgaa 192 ||||| ||||||||||||||||| Sbjct: 311 cacgcggaggcgaagcatccgaa 333
>gb|AY143800.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds Length = 237 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 115 cagtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagtgaaatgcagggag 174 Query: 170 cacgccgaggcgaagcatccgaa 192 ||||| ||||||||||||||||| Sbjct: 175 cacgcggaggcgaagcatccgaa 197
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence Length = 2116 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 231 cagtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagtgaaatgcagggag 290 Query: 170 cacgccgaggcgaagcatccgaa 192 ||||| ||||||||||||||||| Sbjct: 291 cacgcggaggcgaagcatccgaa 313
>gb|AY056377.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds Length = 475 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 188 cagtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagtgaaatgcagggag 247 Query: 170 cacgccgaggcgaagcatccgaa 192 ||||| ||||||||||||||||| Sbjct: 248 cacgcggaggcgaagcatccgaa 270
>gb|AY052343.1| Arabidopsis thaliana At2g23090/F21P24.15 mRNA, complete cds Length = 480 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 191 cagtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagtgaaatgcagggag 250 Query: 170 cacgccgaggcgaagcatccgaa 192 ||||| ||||||||||||||||| Sbjct: 251 cacgcggaggcgaagcatccgaa 273
>emb|BX821290.1|CNS0A98Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 535 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 240 cagtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagtgaaatgcagggag 299 Query: 170 cacgccgaggcgaagcatccgaa 192 ||||| ||||||||||||||||| Sbjct: 300 cacgcggaggcgaagcatccgaa 322
>emb|BX819905.1|CNS0A9GG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS46ZE05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 487 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 158 cagtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagtgaaatgcagggag 217 Query: 170 cacgccgaggcgaagcatccgaa 192 ||||| ||||||||||||||||| Sbjct: 218 cacgcggaggcgaagcatccgaa 240
>gb|AY085311.1| Arabidopsis thaliana clone 14468 mRNA, complete sequence Length = 571 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 250 cagtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagtgaaatgcagggag 309 Query: 170 cacgccgaggcgaagcatccgaa 192 ||||| ||||||||||||||||| Sbjct: 310 cacgcggaggcgaagcatccgaa 332
>gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P24 map CIC06C07, complete sequence Length = 94038 Score = 60.0 bits (30), Expect = 7e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 111 agtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggagc 170 |||||||| | || ||||| || ||||||||||| || || |||| || |||| ||||| Sbjct: 61339 agtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagtgaaatgcagggagc 61280 Query: 171 acgccgaggcgaagcatccgaa 192 |||| ||||||||||||||||| Sbjct: 61279 acgcggaggcgaagcatccgaa 61258
>emb|BX821485.1|CNS0A95U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 412 Score = 56.0 bits (28), Expect = 1e-04 Identities = 71/84 (84%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 147 cagtgcaaggtttgtatgcaaacattcatctgcacgacatcggaagttaaatgcagggag 206 Query: 170 cacgcc-gaggcgaagcatccgaa 192 |||||| ||||||||||||||||| Sbjct: 207 cacgccggaggcgaagcatccgaa 230
>gb|AC144765.19| Medicago truncatula clone mth2-35o11, complete sequence Length = 130836 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | |||||||| || || ||||||||||| || |||| |||||||||||| Sbjct: 77290 cagtgcaaggtgtgcatgcaaacatttatctgcaccacatcagaagtgaagtgcaaggag 77349 Query: 170 cacgccgaggc 180 || || ||||| Sbjct: 77350 catgctgaggc 77360 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 gagaggaacctcgagaagctgaag 61 ||||||||||||||||||| |||| Sbjct: 75697 gagaggaacctcgagaagcagaag 75720
>gb|AC137703.42| Medicago truncatula clone mth2-11d24, complete sequence Length = 127446 Score = 54.0 bits (27), Expect = 4e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | |||||||| || || ||||||||||| || |||| |||||||||||| Sbjct: 124349 cagtgcaaggtgtgcatgcaaacatttatctgcaccacatcagaagtgaagtgcaaggag 124290 Query: 170 cacgccgaggc 180 || || ||||| Sbjct: 124289 catgctgaggc 124279 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 gagaggaacctcgagaagctgaag 61 ||||||||||||||||||| |||| Sbjct: 125942 gagaggaacctcgagaagcagaag 125919
>emb|BX821559.1|CNS0A96B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 485 Score = 54.0 bits (27), Expect = 4e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 110 cagtgcaagatatgcatgcagactttcatctgcaccacctctgaagcaaagtgcaaggag 169 ||||||||| | || ||||| || ||||||||||| || || |||| || |||| |||| Sbjct: 158 cagtgcaaggtttgtatgcaaacattcatctgcactacatcggaagtgaaatgcagggag 217 Query: 170 cacgccgaggcgaagcatccgaa 192 ||||| |||||||| |||||||| Sbjct: 218 cacgcggaggcgaatcatccgaa 240
>gb|AC132886.18| Mus musculus chromosome 13, clone RP24-267I21, complete sequence Length = 184315 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 agggagagataaaagagagagaag 277 |||||||||||||||||||||||| Sbjct: 39824 agggagagataaaagagagagaag 39801
>emb|BX819475.1|CNS0A9PV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 258 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Plus Query: 161 tgcaaggagcacgccgaggcgaagcatccgaa 192 |||| ||||||||| ||||||||||||||||| Sbjct: 1 tgcagggagcacgcggaggcgaagcatccgaa 32
>emb|AJ012688.1|CAR012688 Cicer arietinum mRNA for hypothetical protein, clone Can40-1 Length = 534 Score = 46.1 bits (23), Expect = 0.11 Identities = 91/113 (80%), Gaps = 3/113 (2%) Strand = Plus / Plus Query: 38 gagaggaacctcgagaagctgaag---ggcggcaaggggagccagctcgaggccaacaag 94 ||||||||||||||||||| |||| | ||||| || |||||||| || | || ||| Sbjct: 87 gagaggaacctcgagaagcagaagaatgctggcaaaggtagccagcttgaaactaataag 146 Query: 95 aaggccatgaacatccagtgcaagatatgcatgcagactttcatctgcaccac 147 || |||||| |||||||||||| | |||||||| || || ||||||||||| Sbjct: 147 aaagccatgtcgatccagtgcaaggtgtgcatgcaaacatttatctgcaccac 199
>gb|AC166747.4| Mus musculus chromosome 5, clone RP23-316L10, complete sequence Length = 189572 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 251 gagagggagagataaaagagagagaa 276 |||||||||||| ||||||||||||| Sbjct: 131603 gagagggagagagaaaagagagagaa 131578
>gb|AC124727.4| Mus musculus BAC clone RP23-465O22 from chromosome 3, complete sequence Length = 181528 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ggagagggagagataaaagagagaga 275 ||||||||||||| |||||||||||| Sbjct: 158565 ggagagggagagagaaaagagagaga 158540
>gb|AC122902.4| Mus musculus BAC clone RP23-40O6 from chromosome 3, complete sequence Length = 186144 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ggagagggagagataaaagagagaga 275 ||||||||||||| |||||||||||| Sbjct: 38048 ggagagggagagagaaaagagagaga 38023
>gb|AC011749.2|AC011749 Homo sapiens BAC clone RP11-455E3 from Y, complete sequence Length = 205053 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ggagagggagagataaaagagagaga 275 ||||||||||||| |||||||||||| Sbjct: 54525 ggagagggagagagaaaagagagaga 54500
>emb|AL772402.5| Mouse DNA sequence from clone RP23-65J9 on chromosome 11, complete sequence Length = 242502 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 250 ggagagggagagataaaagagagaga 275 ||||||||||||| |||||||||||| Sbjct: 138277 ggagagggagagagaaaagagagaga 138252
>gb|DQ221706.1| Mizuhopecten yessoensis clone PYES004 microsatellite sequence Length = 627 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagaga 275 |||||||||||| |||||||||||| Sbjct: 73 gagagggagagagaaaagagagaga 97
>gb|AY582736.1| Cucumis melo clone BAC 31O16, complete sequence Length = 159477 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 gagagataaaagagagagaagctgt 281 |||||||||||||||||||| |||| Sbjct: 116756 gagagataaaagagagagaacctgt 116732
>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold Length = 1996640 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagaga 275 ||||||||||||||| ||||||||| Sbjct: 102674 gagagggagagataagagagagaga 102698
>gb|AY737497.1| Macropus eugenii OPN1MW (OPN1MW) and CXorf2 (CXorf2) genes, complete cds Length = 92215 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 gagagataaaagagagagaag 277 ||||||||||||||||||||| Sbjct: 78272 gagagataaaagagagagaag 78252
>gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1, complete sequence Length = 204558 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 251 gagagggagagataaaagaga 271 ||||||||||||||||||||| Sbjct: 30770 gagagggagagataaaagaga 30750
>gb|AC122306.4| Mus musculus BAC clone RP23-285M8 from 18, complete sequence Length = 177969 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 ggagagggagagataaaagagagag 274 ||||||||||||| ||||||||||| Sbjct: 138077 ggagagggagagagaaaagagagag 138101
>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87 Length = 196339 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 gggagagataaaagagagaga 275 ||||||||||||||||||||| Sbjct: 160382 gggagagataaaagagagaga 160362
>gb|AC156939.5| Mus musculus BAC clone RP23-136O24 from chromosome 12, complete sequence Length = 218561 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagaga 275 |||||||||||| |||||||||||| Sbjct: 148044 gagagggagagagaaaagagagaga 148068
>gb|AC125227.6| Mus musculus BAC clone RP23-42I13 from chromosome 7, complete sequence Length = 211209 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagaga 275 |||||||||||| |||||||||||| Sbjct: 44587 gagagggagagagaaaagagagaga 44611
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagaga 275 ||||| ||||||||||||||||||| Sbjct: 16685335 gagagtgagagataaaagagagaga 16685359
>gb|AC145409.3| Macropus eugenii clone ME_KBa-528O13, complete sequence Length = 140426 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagaga 275 ||||||||||||||| ||||||||| Sbjct: 102674 gagagggagagataagagagagaga 102698
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 tcgagaagctgaagggcggca 68 ||||||||||||||||||||| Sbjct: 2620630 tcgagaagctgaagggcggca 2620650
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagaga 275 ||||| ||||||||||||||||||| Sbjct: 34029 gagagtgagagataaaagagagaga 34053
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagaga 275 ||||| ||||||||||||||||||| Sbjct: 93474 gagagtgagagataaaagagagaga 93498
>gb|AC102385.23| Mus musculus chromosome 1, clone RP24-338N17, complete sequence Length = 119980 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 ggagagataaaagagagagaa 276 ||||||||||||||||||||| Sbjct: 97153 ggagagataaaagagagagaa 97173
>emb|AL035605.1|ATF19F18 Arabidopsis thaliana DNA chromosome 4, BAC clone F19F18 (ESSA project) Length = 91740 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 gggagagataaaagagagaga 275 ||||||||||||||||||||| Sbjct: 36960 gggagagataaaagagagaga 36940
>emb|AL627409.9| Mouse DNA sequence from clone RP23-430L23 on chromosome X, complete sequence Length = 189295 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagaga 275 |||||||||||| |||||||||||| Sbjct: 26197 gagagggagagagaaaagagagaga 26221
>emb|AL645975.9| Mouse DNA sequence from clone RP23-154F12 on chromosome 11, complete sequence Length = 44496 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 251 gagagggagagataaaagagagaga 275 |||||||||||| |||||||||||| Sbjct: 25085 gagagggagagagaaaagagagaga 25061
>ref|XM_549966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 agggagagataaaagagagagaag 277 ||||||||| |||||||||||||| Sbjct: 178 agggagagagaaaagagagagaag 201
>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence Length = 177843 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 atatgcatgcagactttcat 138 |||||||||||||||||||| Sbjct: 68502 atatgcatgcagactttcat 68483
>gb|AC131577.16| Mus musculus chromosome 1, clone RP23-23I4, complete sequence Length = 234224 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 aagcagtgatatctgccaaa 243 |||||||||||||||||||| Sbjct: 157658 aagcagtgatatctgccaaa 157677
>ref|XM_365780.1| Magnaporthe grisea 70-15 hypothetical protein (MG02482.4) partial mRNA Length = 2523 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 ggcggcggcaacgctcagaagtccaaga 29 ||||||||||||| | |||||||||||| Sbjct: 1639 ggcggcggcaacggtaagaagtccaaga 1666
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cggcaaggggagccagctcg 83 |||||||||||||||||||| Sbjct: 513125 cggcaaggggagccagctcg 513144
>gb|AC145589.3| Mus musculus BAC clone RP24-174M10 from chromosome Y, complete sequence Length = 152506 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 agagggagagataaaagagagaga 275 ||||||||||| |||||||||||| Sbjct: 139347 agagggagagaaaaaagagagaga 139370
>gb|AC147621.3| Mus musculus BAC clone RP24-315M14 from chromosome Y, complete sequence Length = 166529 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 252 agagggagagataaaagagagaga 275 ||||||||||| |||||||||||| Sbjct: 32173 agagggagagaaaaaagagagaga 32196
>ref|XM_455071.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E24871g predicted mRNA Length = 675 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gcagtgatatctgccaaatc 245 |||||||||||||||||||| Sbjct: 419 gcagtgatatctgccaaatc 400
>gb|AC091465.7| Mus musculus chromosome 1, clone RP23-221K1, complete sequence Length = 199109 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 aagcagtgatatctgccaaa 243 |||||||||||||||||||| Sbjct: 32679 aagcagtgatatctgccaaa 32698
>emb|AL157832.14| Human DNA sequence from clone RP11-109A6 on chromosome 10 Contains the 3' end of the MGMT gene for O-6-methylguanine-DNA methyltransferase and three novel genes, complete sequence Length = 130192 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 agctgctttggttgtgtgcc 385 |||||||||||||||||||| Sbjct: 92221 agctgctttggttgtgtgcc 92240
>emb|AL031279.1|HS163O16 Human DNA sequence from clone RP1-163O16 on chromosome 1p35.1-36.13 Contains CA repeat, STS, complete sequence Length = 135628 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ggagagataaaagagagaga 275 |||||||||||||||||||| Sbjct: 122859 ggagagataaaagagagaga 122878
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gcagtgatatctgccaaatc 245 |||||||||||||||||||| Sbjct: 2202320 gcagtgatatctgccaaatc 2202301
>emb|BX546466.6| Zebrafish DNA sequence from clone DKEY-43N10 in linkage group 23, complete sequence Length = 109069 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 gagagggagagataaaagagagag 274 ||||||||||||| |||||||||| Sbjct: 10584 gagagggagagatgaaagagagag 10561
>emb|BX323580.6| Zebrafish DNA sequence from clone DKEY-49J14 in linkage group 6, complete sequence Length = 98167 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 agggagagataaaagagagagaag 277 ||||||| |||||||||||||||| Sbjct: 57958 agggagaaataaaagagagagaag 57935
>dbj|AK056146.1| Homo sapiens cDNA FLJ31584 fis, clone NT2RI2002153 Length = 2713 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 agctgctttggttgtgtgcc 385 |||||||||||||||||||| Sbjct: 1107 agctgctttggttgtgtgcc 1126
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 gcaccacctctgaagcaaag 160 |||||||||||||||||||| Sbjct: 2515156 gcaccacctctgaagcaaag 2515175
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 agggagagataaaagagagagaag 277 ||||||||| |||||||||||||| Sbjct: 1265962 agggagagagaaaagagagagaag 1265985
>gb|AY859768.1| Lota lota clone Llo15 microsatellite sequence Length = 677 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 gagagggagagataaaagagagag 274 |||||||||||| ||||||||||| Sbjct: 87 gagagggagagagaaaagagagag 110
>gb|AC008331.7|AC008331 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone BACR02B16, complete sequence Length = 186938 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 gagagggagagataaaagagagag 274 |||||||||||| ||||||||||| Sbjct: 127794 gagagggagagaaaaaagagagag 127771
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 agctcgaggccaacaagaaggcca 101 ||||||||||||| |||||||||| Sbjct: 404785 agctcgaggccaagaagaaggcca 404808
>gb|AC099799.6| Homo sapiens BAC clone RP11-637F15 from 2, complete sequence Length = 85432 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 245 cagacggagagggagagataaaagagagagaa 276 |||| ||||||||||||| ||| ||||||||| Sbjct: 35316 cagagggagagggagagaaaaaggagagagaa 35347
>gb|AC116176.4| Homo sapiens BAC clone RP11-299D11 from 2, complete sequence Length = 96974 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 245 cagacggagagggagagataaaagagagagaa 276 |||| ||||||||||||| ||| ||||||||| Sbjct: 74802 cagagggagagggagagaaaaaggagagagaa 74833
>gb|AC106772.3| Homo sapiens chromosome 5 clone RP11-310P5, complete sequence Length = 161984 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 346 ctctggtgtgctgctgtcccagct 369 ||||||| |||||||||||||||| Sbjct: 120353 ctctggtttgctgctgtcccagct 120376
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 agggagagataaaagagagagaag 277 ||||||||| |||||||||||||| Sbjct: 59616 agggagagagaaaagagagagaag 59639
>emb|BX004984.6| Zebrafish DNA sequence from clone DKEY-3N4, complete sequence Length = 264738 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 agggagagataaaagagagagaag 277 ||||||| |||||||||||||||| Sbjct: 11735 agggagaaataaaagagagagaag 11758
>emb|AL954390.19| Mouse DNA sequence from clone RP23-13H18 on chromosome 4, complete sequence Length = 185237 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 catgcagactttcatctgca 143 |||||||||||||||||||| Sbjct: 134920 catgcagactttcatctgca 134939
>emb|AL807381.6| Zebrafish DNA sequence from clone CH211-222N24, complete sequence Length = 230718 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 agggagagataaaagagagagaag 277 ||||||| |||||||||||||||| Sbjct: 214341 agggagaaataaaagagagagaag 214364
>emb|BX293547.6| Zebrafish DNA sequence from clone CH211-142E24 in linkage group 20, complete sequence Length = 157145 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ggagagggagagataaaaga 269 |||||||||||||||||||| Sbjct: 142857 ggagagggagagataaaaga 142876
>gb|AE003622.4| Drosophila melanogaster chromosome 2L, section 31 of 83 of the complete sequence Length = 262557 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 gagagggagagataaaagagagag 274 |||||||||||| ||||||||||| Sbjct: 39472 gagagggagagaaaaaagagagag 39449
>emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15, complete sequence Length = 150641 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 gagagggagagataaaagagagag 274 ||||||||||||| |||||||||| Sbjct: 139509 gagagggagagatgaaagagagag 139486
>emb|AJ300486.1|LGE300486 Leishmania gerbilli internal transcribed spacer 1,(ITS1) 5.8S rRNA gene and internal transcribed spacer 2 (ITS2), strain MRHO/UZ/87/KD-87555 Length = 1061 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gggagagataaaagagagagaagc 278 |||||||| ||||||||||||||| Sbjct: 723 gggagagaaaaaagagagagaagc 746 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,860,909 Number of Sequences: 3902068 Number of extensions: 4860909 Number of successful extensions: 107098 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 106567 Number of HSP's gapped (non-prelim): 524 length of query: 493 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 471 effective length of database: 17,147,199,772 effective search space: 8076331092612 effective search space used: 8076331092612 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)