ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2d17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 393 gggaggcggaggaagacctcctccaggagctcgt 426 |||||||||| |||||||||||| |||||||||| Sbjct: 22034562 gggaggcggacgaagacctcctcgaggagctcgt 22034529 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gcggaggaagacctcctccaggagctcgt 426 |||||||| || ||||||||||||||||| Sbjct: 22075109 gcggaggaggatctcctccaggagctcgt 22075081 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gcggaggaagacctcctccaggagctcgt 426 ||||||||||| |||||| |||||||||| Sbjct: 22071711 gcggaggaagatctcctcgaggagctcgt 22071683 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ttgtcgatggcggcggcggcg 465 ||||||||||||||||||||| Sbjct: 2783948 ttgtcgatggcggcggcggcg 2783928 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 gcgggctcgtcccgcgggaggcggagga 405 |||||||||||| |||||| |||||||| Sbjct: 1083352 gcgggctcgtccggcgggatgcggagga 1083379
>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0013G11 Length = 151405 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 393 gggaggcggaggaagacctcctccaggagctcgt 426 |||||||||| |||||||||||| |||||||||| Sbjct: 126606 gggaggcggacgaagacctcctcgaggagctcgt 126573
>dbj|AK072955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146I19, full insert sequence Length = 1623 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 393 gggaggcggaggaagacctcctccaggagctcgt 426 |||||||||| |||||||||||| |||||||||| Sbjct: 144 gggaggcggacgaagacctcctcgaggagctcgt 111
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 443 cgttgtcgatggcggcggcggcga 466 |||||||||||||||||||||||| Sbjct: 4263926 cgttgtcgatggcggcggcggcga 4263949 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cttcggatccagaaggcaggc 59 ||||||||||||||||||||| Sbjct: 796059 cttcggatccagaaggcaggc 796079 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatggctt 472 |||||||||||||||||| ||||| Sbjct: 26697379 cgatggcggcggcggcgagggctt 26697402
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Plus Query: 443 cgttgtcgatggcggcggcggcga 466 |||||||||||||||||||||||| Sbjct: 4263913 cgttgtcgatggcggcggcggcga 4263936 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cttcggatccagaaggcaggc 59 ||||||||||||||||||||| Sbjct: 796059 cttcggatccagaaggcaggc 796079 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatggctt 472 |||||||||||||||||| ||||| Sbjct: 26625548 cgatggcggcggcggcgagggctt 26625571
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 443 cgttgtcgatggcggcggcggcga 466 |||||||||||||||||||||||| Sbjct: 19857 cgttgtcgatggcggcggcggcga 19834
>ref|XM_481405.1| Oryza sativa (japonica cultivar-group), mRNA Length = 435 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 379 cgggctcgtcccgcgggaggcggagga 405 ||||||||||| ||||||||||||||| Sbjct: 106 cgggctcgtccggcgggaggcggagga 80
>gb|BT018454.1| Zea mays clone EL01N0408D11.d mRNA sequence Length = 1429 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 441 gccgttgtcgatggcggcggcggcgat 467 |||||||| |||||||||||||||||| Sbjct: 1179 gccgttgtagatggcggcggcggcgat 1153
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 379 cgggctcgtcccgcgggaggcggagga 405 ||||||||||| ||||||||||||||| Sbjct: 128280 cgggctcgtccggcgggaggcggagga 128306
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 379 cgggctcgtcccgcgggaggcggagga 405 ||||||||||| ||||||||||||||| Sbjct: 12265551 cgggctcgtccggcgggaggcggagga 12265525
>gb|AC098828.3| Homo sapiens BAC clone RP11-644K8 from 2, complete sequence Length = 127408 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 215 tgcctcctaactcccatccctcc 237 ||||||||||||||||||||||| Sbjct: 47662 tgcctcctaactcccatccctcc 47684
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0063H21 Length = 188058 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 379 cgggctcgtcccgcgggaggcggagga 405 ||||||||||| ||||||||||||||| Sbjct: 139043 cgggctcgtccggcgggaggcggagga 139017
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 379 cgggctcgtcccgcgggaggcggagga 405 ||||||||||| ||||||||||||||| Sbjct: 24200 cgggctcgtccggcgggaggcggagga 24174
>dbj|AK107112.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-123-A07, full insert sequence Length = 2287 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 379 cgggctcgtcccgcgggaggcggagga 405 ||||||||||| ||||||||||||||| Sbjct: 169 cgggctcgtccggcgggaggcggagga 143
>gb|AY110281.1| Zea mays CL27576_1 mRNA sequence Length = 673 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 441 gccgttgtcgatggcggcggcggcgat 467 |||||||| |||||||||||||||||| Sbjct: 314 gccgttgtagatggcggcggcggcgat 340
>ref|XM_465255.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1282 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 453 ggcggcggcggcgatggcttggaggctagggttt 486 |||||||||||||||| | ||| ||||||||||| Sbjct: 43 ggcggcggcggcgatgacatgggggctagggttt 10
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 441 gccgttgtcgatggcggcggcg 462 |||||||||||||||||||||| Sbjct: 1707152 gccgttgtcgatggcggcggcg 1707131
>ref|XM_871264.1| PREDICTED: Bos taurus similar to CG9853-PA (LOC618954), mRNA Length = 1658 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatggc 470 |||||||||||||||||||||| Sbjct: 381 cgatggcggcggcggcgatggc 402
>gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome 7, complete sequence Length = 202934 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 ctcccatccctcctctccctac 246 |||||||||||||||||||||| Sbjct: 148571 ctcccatccctcctctccctac 148592
>ref|XM_001000641.1| PREDICTED: Mus musculus leucine rich repeat containing 47 (Lrrc47), mRNA Length = 1686 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatggc 470 |||||||||||||||||||||| Sbjct: 65 cgatggcggcggcggcgatggc 86
>gb|AC124438.4| Mus musculus BAC clone RP24-260K9 from chromosome 7, complete sequence Length = 183326 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 ctcccatccctcctctccctac 246 |||||||||||||||||||||| Sbjct: 24880 ctcccatccctcctctccctac 24901
>ref|XM_548720.2| PREDICTED: Canis familiaris similar to CG9853-PA (LOC491599), mRNA Length = 1008 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatggc 470 |||||||||||||||||||||| Sbjct: 102 cgatggcggcggcggcgatggc 123
>emb|CR683246.2|CNS0FQ56 Tetraodon nigroviridis full-length cDNA Length = 1851 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 394 ggaggcggaggaagacctcctccagg 419 |||||| ||||||||||||||||||| Sbjct: 108 ggaggctgaggaagacctcctccagg 133
>gb|AY081837.1| Bradyrhizobium japonicum isolate pPM200P9-2 putative amidase AmiC (amiC) gene, partial cds; pyruvate dehydrogenase (poxB), 2-dehydro-3-deoxyphosphogalactonate aldolase (dgoA), 2-dehydro-3-deoxygalactonate kinase (dgoK), putative alkanal monooxygenase (luxA2), HpaC (hpaC), and sigma 54 activator (acoR) genes, complete cds; and unknown genes Length = 8973 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 tgtcgatggcggcggcggcgat 467 |||||||||||||||||||||| Sbjct: 5417 tgtcgatggcggcggcggcgat 5396
>dbj|AK154897.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110M03 product:hypothetical Leucine-rich repeat/Leucine-rich repeat, typical subtype/Leucine-rich region profile containing protein, full insert sequence Length = 3423 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatggc 470 |||||||||||||||||||||| Sbjct: 42 cgatggcggcggcggcgatggc 63
>gb|BC094573.1| Mus musculus leucine rich repeat containing 47, mRNA (cDNA clone MGC:106431 IMAGE:30354494), complete cds Length = 3407 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatggc 470 |||||||||||||||||||||| Sbjct: 2 cgatggcggcggcggcgatggc 23
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggcttggaggctagggttt 486 |||||||||||||||| | ||| ||||||||||| Sbjct: 12603206 ggcggcggcggcgatgacatgggggctagggttt 12603239 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggcttggag 476 ||||||||||||| |||||||||| Sbjct: 7568624 ggcggcggcggcggtggcttggag 7568647 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 1302345 ggcggcggcggcgatggctt 1302326
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 tgtcgatggcggcggcggcgat 467 |||||||||||||||||||||| Sbjct: 8019278 tgtcgatggcggcggcggcgat 8019257
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggcttggaggctagggttt 486 |||||||||||||||| | ||| ||||||||||| Sbjct: 265 ggcggcggcggcgatgacatgggggctagggttt 298
>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572D06 Length = 148920 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggcttggaggctagggttt 486 |||||||||||||||| | ||| ||||||||||| Sbjct: 107739 ggcggcggcggcgatgacatgggggctagggttt 107772
>dbj|AK071724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114H08, full insert sequence Length = 1282 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 453 ggcggcggcggcgatggcttggaggctagggttt 486 |||||||||||||||| | ||| ||||||||||| Sbjct: 43 ggcggcggcggcgatgacatgggggctagggttt 10
>emb|AL806525.23| Mouse DNA sequence from clone RP23-254N4 on chromosome 4, complete sequence Length = 209356 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatggc 470 |||||||||||||||||||||| Sbjct: 61054 cgatggcggcggcggcgatggc 61075
>ref|NM_201226.1| Mus musculus leucine rich repeat containing 47 (Lrrc47), mRNA Length = 3395 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatggc 470 |||||||||||||||||||||| Sbjct: 12 cgatggcggcggcggcgatggc 33
>ref|NM_120115.3| Arabidopsis thaliana unknown protein AT4G39550 mRNA, complete cds Length = 1380 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 444 gttgtcgatggcggcggcggcgatggctt 472 ||||||||| |||||| |||||||||||| Sbjct: 111 gttgtcgattgcggcgtcggcgatggctt 83
>ref|XM_524315.1| PREDICTED: Pan troglodytes LOC468930 (LOC468930), mRNA Length = 3795 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gatggcggcggcggcgatggc 470 ||||||||||||||||||||| Sbjct: 173 gatggcggcggcggcgatggc 153
>ref|XM_476664.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ttgtcgatggcggcggcggcg 465 ||||||||||||||||||||| Sbjct: 353 ttgtcgatggcggcggcggcg 333
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cagaaggcaggccatggcggc 68 ||||||||||||||||||||| Sbjct: 622129 cagaaggcaggccatggcggc 622109
>gb|AY770836.1| Salix burjatica microsatellite SB880 sequence Length = 190 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatgg 469 ||||||||||||||||||||| Sbjct: 133 cgatggcggcggcggcgatgg 153
>gb|AY022827.1| Oryza sativa microsatellite MRG5152 containing (CGC)X9, genomic sequence Length = 227 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gcggaggaagacctcctccaggagctcgt 426 |||||||| || ||||||||||||||||| Sbjct: 225 gcggaggaggatctcctccaggagctcgt 197
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cttcggatccagaaggcaggc 59 ||||||||||||||||||||| Sbjct: 126389 cttcggatccagaaggcaggc 126409
>ref|XM_755827.1| Ustilago maydis 521 hypothetical protein (UM04773.1) partial mRNA Length = 6198 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 431 cagcgacggtgccgttgtcgatggc 455 ||||||||||| ||||||||||||| Sbjct: 1801 cagcgacggtgacgttgtcgatggc 1777
>gb|AC127364.3| Mus musculus BAC clone RP23-3F6 from chromosome 1, complete sequence Length = 204558 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 tcccatccctcctctccctac 246 ||||||||||||||||||||| Sbjct: 66364 tcccatccctcctctccctac 66344
>gb|AC132463.3| Mus musculus BAC clone RP23-42M5 from chromosome 13, complete sequence Length = 151340 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 cccatccctcctctccctacg 247 ||||||||||||||||||||| Sbjct: 89790 cccatccctcctctccctacg 89770
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gcgatggatgccggcgacgga 153 ||||||||||||||||||||| Sbjct: 48640 gcgatggatgccggcgacgga 48620
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91 Length = 198151 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 444 gttgtcgatggcggcggcggcgatggctt 472 ||||||||| |||||| |||||||||||| Sbjct: 101965 gttgtcgattgcggcgtcggcgatggctt 101993
>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project) Length = 129047 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 444 gttgtcgatggcggcggcggcgatggctt 472 ||||||||| |||||| |||||||||||| Sbjct: 76751 gttgtcgattgcggcgtcggcgatggctt 76779
>dbj|AB028987.2| Homo sapiens mRNA for KIAA1064 protein, partial cds Length = 6115 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gatggcggcggcggcgatggc 470 ||||||||||||||||||||| Sbjct: 112 gatggcggcggcggcgatggc 92
>gb|AE011859.1| Xanthomonas axonopodis pv. citri str. 306, section 237 of 469 of the complete genome Length = 10461 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 424 cgtgcggcagcgacggtgccg 444 ||||||||||||||||||||| Sbjct: 3546 cgtgcggcagcgacggtgccg 3526
>ref|XM_942694.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 7, transcript variant 4 (C19orf7), mRNA Length = 6107 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gatggcggcggcggcgatggc 470 ||||||||||||||||||||| Sbjct: 106 gatggcggcggcggcgatggc 86
>ref|XM_028253.5| PREDICTED: Homo sapiens chromosome 19 open reading frame 7, transcript variant 1 (C19orf7), mRNA Length = 6107 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gatggcggcggcggcgatggc 470 ||||||||||||||||||||| Sbjct: 106 gatggcggcggcggcgatggc 86
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gcgatggatgccggcgacgga 153 ||||||||||||||||||||| Sbjct: 24571738 gcgatggatgccggcgacgga 24571718 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cttcggatccagaaggcaggc 59 ||||||||||||||||||||| Sbjct: 3758717 cttcggatccagaaggcaggc 3758737 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 atggcggcggcggcgatggc 470 |||||||||||||||||||| Sbjct: 5961665 atggcggcggcggcgatggc 5961684
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tcgatggcggcggcggcgatg 468 ||||||||||||||||||||| Sbjct: 29240246 tcgatggcggcggcggcgatg 29240226 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 5079063 ggcggcggcggcgatggctt 5079082
>emb|BX828255.1|CNS0A3WX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1360 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 444 gttgtcgatggcggcggcggcgatggctt 472 ||||||||| |||||| |||||||||||| Sbjct: 89 gttgtcgattgcggcgtcggcgatggctt 61
>gb|AC008755.8| Homo sapiens chromosome 19 clone CTD-3026N16, complete sequence Length = 203912 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 gatggcggcggcggcgatggc 470 ||||||||||||||||||||| Sbjct: 139342 gatggcggcggcggcgatggc 139362
>gb|AE009569.1| Brucella melitensis 16M chromosome I, section 126 of 195 of the complete sequence Length = 10641 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 cagaaggcaggccatggcggc 68 ||||||||||||||||||||| Sbjct: 9771 cagaaggcaggccatggcggc 9791
>gb|BT003146.1| Arabidopsis thaliana At4g39550 mRNA, complete cds Length = 1179 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 444 gttgtcgatggcggcggcggcgatggctt 472 ||||||||| |||||| |||||||||||| Sbjct: 65 gttgtcgattgcggcgtcggcgatggctt 37
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cagaaggcaggccatggcggc 68 ||||||||||||||||||||| Sbjct: 643634 cagaaggcaggccatggcggc 643614
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tcgatggcggcggcggcgatg 468 ||||||||||||||||||||| Sbjct: 3044 tcgatggcggcggcggcgatg 3024
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ttgtcgatggcggcggcggcg 465 ||||||||||||||||||||| Sbjct: 87509 ttgtcgatggcggcggcggcg 87489
>dbj|AP005125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0058I18 Length = 151453 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gcggaggaagacctcctccaggagctcgt 426 |||||||| || ||||||||||||||||| Sbjct: 28765 gcggaggaggatctcctccaggagctcgt 28737 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gcggaggaagacctcctccaggagctcgt 426 ||||||||||| |||||| |||||||||| Sbjct: 25367 gcggaggaagatctcctcgaggagctcgt 25339
>dbj|AK106624.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B05, full insert sequence Length = 2706 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gcggaggaagacctcctccaggagctcgt 426 ||||||||||| |||||| |||||||||| Sbjct: 73 gcggaggaagatctcctcgaggagctcgt 45
>dbj|AK105531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G10, full insert sequence Length = 1447 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 448 tcgatggcggcggcggcgatg 468 ||||||||||||||||||||| Sbjct: 1217 tcgatggcggcggcggcgatg 1197
>dbj|AK103629.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133P11, full insert sequence Length = 972 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cttcggatccagaaggcaggc 59 ||||||||||||||||||||| Sbjct: 301 cttcggatccagaaggcaggc 281
>emb|AJ328742.1|HSA328742 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NP8R Length = 673 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 gatggcggcggcggcgatggc 470 ||||||||||||||||||||| Sbjct: 161 gatggcggcggcggcgatggc 181
>dbj|AK070977.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072E20, full insert sequence Length = 1898 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 gcggaggaagacctcctccaggagctcgt 426 |||||||| || ||||||||||||||||| Sbjct: 188 gcggaggaggatctcctccaggagctcgt 160
>dbj|AK066221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055O08, full insert sequence Length = 1172 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cttcggatccagaaggcaggc 59 ||||||||||||||||||||| Sbjct: 251 cttcggatccagaaggcaggc 231
>dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1048_C10 Length = 99194 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ttgtcgatggcggcggcggcg 465 ||||||||||||||||||||| Sbjct: 90959 ttgtcgatggcggcggcggcg 90939
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 gcgatggatgccggcgacgga 153 ||||||||||||||||||||| Sbjct: 24883408 gcgatggatgccggcgacgga 24883388 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 cttcggatccagaaggcaggc 59 ||||||||||||||||||||| Sbjct: 3767411 cttcggatccagaaggcaggc 3767431 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 atggcggcggcggcgatggc 470 |||||||||||||||||||| Sbjct: 6028142 atggcggcggcggcgatggc 6028161
>emb|BX000500.4|CNS08CDQ Oryza sativa chromosome 12, . BAC OSJNBb0027B07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 79383 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cttcggatccagaaggcaggc 59 ||||||||||||||||||||| Sbjct: 71865 cttcggatccagaaggcaggc 71845
>emb|CT025667.9| Mouse DNA sequence from clone RP23-227F4 on chromosome 13, complete sequence Length = 206864 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 cccatccctcctctccctacg 247 ||||||||||||||||||||| Sbjct: 192679 cccatccctcctctccctacg 192699
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 48 cagaaggcaggccatggcggc 68 ||||||||||||||||||||| Sbjct: 639931 cagaaggcaggccatggcggc 639911
>gb|AY854820.1| Drosophila americana strain G96.48 corkscrew (csw) gene, partial cds Length = 1129 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cgttgtcgatggcggcggcg 462 |||||||||||||||||||| Sbjct: 846 cgttgtcgatggcggcggcg 827
>gb|AY854819.1| Drosophila americana strain G96.47 corkscrew (csw) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cgttgtcgatggcggcggcg 462 |||||||||||||||||||| Sbjct: 855 cgttgtcgatggcggcggcg 836
>gb|AY854818.1| Drosophila americana strain G96.45 corkscrew (csw) gene, partial cds Length = 1129 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cgttgtcgatggcggcggcg 462 |||||||||||||||||||| Sbjct: 846 cgttgtcgatggcggcggcg 827
>gb|AY854817.1| Drosophila americana strain G96.31 corkscrew (csw) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cgttgtcgatggcggcggcg 462 |||||||||||||||||||| Sbjct: 855 cgttgtcgatggcggcggcg 836
>gb|AY854816.1| Drosophila americana strain G96.11 corkscrew (csw) gene, partial cds Length = 1129 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 cgttgtcgatggcggcggcg 462 |||||||||||||||||||| Sbjct: 846 cgttgtcgatggcggcggcg 827
>ref|NM_183626.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gatggcggcggcggcgatgg 469 |||||||||||||||||||| Sbjct: 807 gatggcggcggcggcgatgg 826
>gb|AC111134.10| Mus musculus chromosome 3, clone RP23-349J3, complete sequence Length = 223171 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 tccgaggagaaaggagcctc 526 |||||||||||||||||||| Sbjct: 120557 tccgaggagaaaggagcctc 120538
>ref|XM_474971.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2541 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 1039 ggcggcggcggcgatggctt 1058
>ref|NM_194763.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0013J21.22), mRNA Length = 1434 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gaggcggaggaagacctcctccag 418 |||||||||||||| ||||||||| Sbjct: 288 gaggcggaggaagatctcctccag 265
>ref|XM_463951.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1161 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 73 ggcggcggcggcgatggctt 54
>ref|XM_463208.1| Oryza sativa (japonica cultivar-group), mRNA Length = 291 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatg 468 |||||||||||||||||||| Sbjct: 155 cgatggcggcggcggcgatg 174
>ref|NM_194191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 378 gcgggctcgtcccgcgggaggcggagga 405 |||||||||||| |||||| |||||||| Sbjct: 74 gcgggctcgtccggcgggatgcggagga 47
>ref|XM_472969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 atggcggcggcggcgatggc 470 |||||||||||||||||||| Sbjct: 1 atggcggcggcggcgatggc 20
>ref|NM_173397.2| Mus musculus RIKEN cDNA D930001I22 gene (D930001I22Rik), mRNA Length = 3517 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 catctgagcttccacgtgca 651 |||||||||||||||||||| Sbjct: 3378 catctgagcttccacgtgca 3397
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tggcggcggcggcgatggct 471 |||||||||||||||||||| Sbjct: 1579477 tggcggcggcggcgatggct 1579458
>gb|AF153203.1| Lilium longiflorum meiotin-1 (M1) gene, M1-1 allele, promoter region and partial cds Length = 1898 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tagggtttctggtggggtgg 498 |||||||||||||||||||| Sbjct: 1055 tagggtttctggtggggtgg 1036
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gaggcggaggaagacctcctccag 418 |||||||||||||| ||||||||| Sbjct: 142769 gaggcggaggaagatctcctccag 142746
>gb|AE009164.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 190 of 256 of the complete sequence Length = 10069 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gatggcggcggcggcgatgg 469 |||||||||||||||||||| Sbjct: 1750 gatggcggcggcggcgatgg 1731
>gb|AC090437.62| Mus musculus strain C57BL/6J clone rp23-11f20 map 6, complete sequence Length = 227127 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 catctgagcttccacgtgca 651 |||||||||||||||||||| Sbjct: 27820 catctgagcttccacgtgca 27839
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 cgatggcggcggcggcgatg 468 |||||||||||||||||||| Sbjct: 23427518 cgatggcggcggcggcgatg 23427499
>gb|AC005997.3| Homo sapiens PAC clone RP4-558L10 from 7, complete sequence Length = 143250 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 ggctagggtttctggtgggg 495 |||||||||||||||||||| Sbjct: 105979 ggctagggtttctggtgggg 105960
>ref|XM_838411.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1328) partial mRNA Length = 2391 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 tggcggcggcggcgatggct 471 |||||||||||||||||||| Sbjct: 807 tggcggcggcggcgatggct 788
>ref|XM_752332.1| Ustilago maydis 521 hypothetical protein (UM01278.1) partial mRNA Length = 3588 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggcttggaggcta 480 ||||||||||||| |||| ||||||||| Sbjct: 3367 ggcggcggcggcggtggcgtggaggcta 3394
>emb|AL135927.14| Human DNA sequence from clone RP11-54H19 on chromosome 1 Contains the 3' end of the LMNA gene for lamin A/C, the gene for a novel protein similar to semaphorins (FLJ12287), a novel gene (KIAA0446), the PMF1 gene for polyamine-modulated factor 1, the BGLAP gene for bone gamma-carboxyglutamate (gla) protein (osteocalcin), the gene for progestin and adipoQ receptor family member VI (PAQR6) and the 3' end of the gene for Est1p-like protein B (EST1B), complete sequence Length = 164168 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cccatccctcctctccctac 246 |||||||||||||||||||| Sbjct: 130678 cccatccctcctctccctac 130659
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 tgccgttgtcgatggcggcg 459 |||||||||||||||||||| Sbjct: 337204 tgccgttgtcgatggcggcg 337223
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 atggcggcggcggcgatggc 470 |||||||||||||||||||| Sbjct: 17748 atggcggcggcggcgatggc 17767
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gaggcggaggaagacctcctccag 418 |||||||||||||| ||||||||| Sbjct: 2164629 gaggcggaggaagatctcctccag 2164606
>emb|X04143.1|HSBGPG Human gene for bone gla protein (BGP) Length = 1675 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cccatccctcctctccctac 246 |||||||||||||||||||| Sbjct: 1254 cccatccctcctctccctac 1235
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 tgtcgatggcggcggcggcg 465 |||||||||||||||||||| Sbjct: 688835 tgtcgatggcggcggcggcg 688816
>emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015G09, complete sequence Length = 123375 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 46335 ggcggcggcggcgatggctt 46316
>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete sequence Length = 215657 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gggtttctggtggggtgggg 500 |||||||||||||||||||| Sbjct: 79758 gggtttctggtggggtgggg 79739
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 atggcggcggcggcgatggc 470 |||||||||||||||||||| Sbjct: 109955 atggcggcggcggcgatggc 109936
>emb|BX649484.12| Zebrafish DNA sequence from clone CH211-197H24 in linkage group 16, complete sequence Length = 196058 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 631 tcatctgagcttccacgtgcagaa 654 |||||||||||||||| ||||||| Sbjct: 29847 tcatctgagcttccacatgcagaa 29870
>gb|AC153967.5| Mus musculus 10 BAC RP24-372A5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205657 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctcccatccctcctctccct 244 |||||||||||||||||||| Sbjct: 66813 ctcccatccctcctctccct 66794
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 tcgatggcggcggcggcgat 467 |||||||||||||||||||| Sbjct: 5209766 tcgatggcggcggcggcgat 5209747
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gatggcggcggcggcgatgg 469 |||||||||||||||||||| Sbjct: 1422177 gatggcggcggcggcgatgg 1422158
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gatggcggcggcggcgatgg 469 |||||||||||||||||||| Sbjct: 2103126 gatggcggcggcggcgatgg 2103107
>gb|AF394196.1|AF394196 Simian adenovirus 25, complete genome Length = 36521 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatg 468 |||||||||||||||||||| Sbjct: 13949 cgatggcggcggcggcgatg 13968
>ref|XM_685771.1| PREDICTED: Danio rerio similar to nascent polypeptide-associated complex alpha polypeptide (LOC562388), mRNA Length = 5778 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 631 tcatctgagcttccacgtgcagaa 654 |||||||||||||||| ||||||| Sbjct: 2220 tcatctgagcttccacatgcagaa 2243
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 cgatggcggcggcggcgatg 468 |||||||||||||||||||| Sbjct: 4092068 cgatggcggcggcggcgatg 4092049
>dbj|AK046581.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430109A22 product:unclassifiable, full insert sequence Length = 2602 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 catctgagcttccacgtgca 651 |||||||||||||||||||| Sbjct: 2469 catctgagcttccacgtgca 2488
>gb|AC148715.1| Macaca mulatta Major Histocompatibility Complex BAC MMU487N12, complete sequence Length = 153422 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 tgccctgttcctctttttat 286 |||||||||||||||||||| Sbjct: 48757 tgccctgttcctctttttat 48776
>dbj|AK052945.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930001I22 product:hypothetical protein, full insert sequence Length = 3934 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 catctgagcttccacgtgca 651 |||||||||||||||||||| Sbjct: 3811 catctgagcttccacgtgca 3830
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 atggcggcggcggcgatggc 470 |||||||||||||||||||| Sbjct: 24393544 atggcggcggcggcgatggc 24393525 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 8432960 ggcggcggcggcgatggctt 8432941
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gaggcggaggaagacctcctccag 418 |||||||||||||| ||||||||| Sbjct: 2164629 gaggcggaggaagatctcctccag 2164606
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 cgatggcggcggcggcgatg 468 |||||||||||||||||||| Sbjct: 23420546 cgatggcggcggcggcgatg 23420527
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 gctagggtttctggtggggtgggg 500 ||||||||||| |||||||||||| Sbjct: 30397025 gctagggtttcgggtggggtgggg 30397048 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gatggcggcggcggcgatgg 469 |||||||||||||||||||| Sbjct: 10663641 gatggcggcggcggcgatgg 10663622
>gb|DQ007079.1| Homo sapiens bone gamma-carboxyglutamate (gla) protein (osteocalcin) (BGLAP) gene, complete cds Length = 10147 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cccatccctcctctccctac 246 |||||||||||||||||||| Sbjct: 4879 cccatccctcctctccctac 4860
>dbj|AB176667.1| Sphingomonas sp. A1 a1-IV' gene for alginate lyase, complete cds Length = 2439 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccagccgccatcgtccccac 39 |||||||||||||||||||| Sbjct: 861 ccagccgccatcgtccccac 842
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gatggcggcggcggcgatgg 469 |||||||||||||||||||| Sbjct: 158264 gatggcggcggcggcgatgg 158245
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435H01 Length = 160141 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 gctagggtttctggtggggtgggg 500 ||||||||||| |||||||||||| Sbjct: 25288 gctagggtttcgggtggggtgggg 25311
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 gctagggtttctggtggggtgggg 500 ||||||||||| |||||||||||| Sbjct: 82752 gctagggtttcgggtggggtgggg 82775
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 cgatggcggcggcggcgatg 468 |||||||||||||||||||| Sbjct: 110174 cgatggcggcggcggcgatg 110155
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 38101 ggcggcggcggcgatggctt 38120
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 440 tgccgttgtcgatggcggcggcggcgat 467 ||||| ||||||||||| |||||||||| Sbjct: 532839 tgccgatgtcgatggcgtcggcggcgat 532866
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 133436 ggcggcggcggcgatggctt 133417
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 121177 ggcggcggcggcgatggctt 121196
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggcttggag 476 ||||||||||||| |||||||||| Sbjct: 162330 ggcggcggcggcggtggcttggag 162353
>gb|BC090994.1| Mus musculus RIKEN cDNA D930001I22 gene, mRNA (cDNA clone MGC:107602 IMAGE:6750721), complete cds Length = 3517 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 632 catctgagcttccacgtgca 651 |||||||||||||||||||| Sbjct: 3378 catctgagcttccacgtgca 3397
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 76374 ggcggcggcggcgatggctt 76355
>dbj|AK119282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-C07, full insert sequence Length = 2708 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 1150 ggcggcggcggcgatggctt 1169
>gb|AC007227.3|AC007227 Homo sapiens chromosome 1 clone RPCI-11_54H19, complete sequence Length = 164179 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cccatccctcctctccctac 246 |||||||||||||||||||| Sbjct: 33491 cccatccctcctctccctac 33510
>dbj|AK107931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-A02, full insert sequence Length = 641 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatg 468 |||||||||||||||||||| Sbjct: 180 cgatggcggcggcggcgatg 199
>dbj|AK107389.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C10, full insert sequence Length = 1494 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 cgatggcggcggcggcgatggctt 472 |||||||||||||||||| ||||| Sbjct: 832 cgatggcggcggcggcgagggctt 809
>dbj|AK106850.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A11, full insert sequence Length = 1617 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 gatggcggcggcggcgatgg 469 |||||||||||||||||||| Sbjct: 1029 gatggcggcggcggcgatgg 1048
>dbj|AK105873.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B05, full insert sequence Length = 1161 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 453 ggcggcggcggcgatggctt 472 |||||||||||||||||||| Sbjct: 73 ggcggcggcggcgatggctt 54
>dbj|AK104961.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H12, full insert sequence Length = 1943 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gaggcggaggaagacctcctccag 418 |||||||||||||| ||||||||| Sbjct: 301 gaggcggaggaagatctcctccag 278
>dbj|AK072221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013166C23, full insert sequence Length = 1994 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gaggcggaggaagacctcctccag 418 |||||||||||||| ||||||||| Sbjct: 330 gaggcggaggaagatctcctccag 307
>dbj|AK067266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098C22, full insert sequence Length = 1984 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 atggcggcggcggcgatggc 470 |||||||||||||||||||| Sbjct: 110 atggcggcggcggcgatggc 129
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 378 gcgggctcgtcccgcgggaggcggagga 405 |||||||||||| |||||| |||||||| Sbjct: 80940 gcgggctcgtccggcgggatgcggagga 80967
>gb|DQ019637.1| Triticum aestivum mRNA transport factor (Y14) mRNA, complete cds Length = 978 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 cgatggcggcggcggcgatg 468 |||||||||||||||||||| Sbjct: 60 cgatggcggcggcggcgatg 79
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gccgttgtcgatggcggcgg 460 |||||||||||||||||||| Sbjct: 893349 gccgttgtcgatggcggcgg 893330
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 gaggcggaggaagacctcctccag 418 |||||||||||||| ||||||||| Sbjct: 2164580 gaggcggaggaagatctcctccag 2164557
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 cgatggcggcggcggcgatggctt 472 |||||||||||||||||| ||||| Sbjct: 73748 cgatggcggcggcggcgagggctt 73725
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 cgatggcggcggcggcgatggctt 472 |||||||||||||||||| ||||| Sbjct: 101599 cgatggcggcggcggcgagggctt 101576
>gb|AC133511.3| Mus musculus BAC clone RP23-413E2 from 10, complete sequence Length = 214377 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctcccatccctcctctccct 244 |||||||||||||||||||| Sbjct: 21771 ctcccatccctcctctccct 21752
>gb|AC167562.5| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940122D9, complete sequence Length = 114898 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 catgagcagtttgcggtcgg 116 |||||||||||||||||||| Sbjct: 13732 catgagcagtttgcggtcgg 13713
>emb|AL591488.7| Mouse DNA sequence from clone RP23-36P22 on chromosome 2, complete sequence Length = 191494 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 catctgagcttccacgtgca 651 |||||||||||||||||||| Sbjct: 31797 catctgagcttccacgtgca 31778
>emb|AL691444.9| Mouse DNA sequence from clone RP23-224E21 on chromosome 2, complete sequence Length = 182726 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 cctaactcccatccctcctctccc 243 |||||||||||||||| ||||||| Sbjct: 19632 cctaactcccatccctactctccc 19609 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,844,153 Number of Sequences: 3902068 Number of extensions: 5844153 Number of successful extensions: 179323 Number of sequences better than 10.0: 151 Number of HSP's better than 10.0 without gapping: 163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 172987 Number of HSP's gapped (non-prelim): 6336 length of query: 654 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 631 effective length of database: 17,143,297,704 effective search space: 10817420851224 effective search space used: 10817420851224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
