Clone Name | basd2d16 |
---|---|
Clone Library Name | barley_pub |
>POF13_SCHPO (O94334) F-box protein pof13| Length = 396 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -1 Query: 411 TLTPVIFGSYLVFRVCLDLVPLAQPAPKQCFTPRCPVNCC 292 TLT ++F+ LD +P P +C RCP+N C Sbjct: 223 TLTSNWHSRVILFQNALDALPTTHGNPVECDISRCPLNAC 262
>E41LA_HUMAN (Q9HCS5) Band 4.1-like protein 4A (NBL4 protein)| Length = 598 Score = 31.2 bits (69), Expect = 1.8 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -1 Query: 171 PSFILVMDRSPRFGSISSDNRPIKTRFRYGSGGFRSLNQATAYESPAHSSTGTRSE 4 P F R+P GS + +P++ R + SG L Q S ++S+G+ SE Sbjct: 435 PKFPYTRRRNPSCGSDNDSVQPVRRRKAHNSGEDSDLKQRRRSRSRCNTSSGSESE 490
>YPAH_PSELE (P52089) UPF0178 protein in pahZ1 5'region| Length = 154 Score = 30.8 bits (68), Expect = 2.4 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +2 Query: 224 VVVRGEMPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGCASG 352 V+ +G +PL PR W++ + AQQLT ++ G+G +G Sbjct: 82 VLEKGGLPLNPRGEWYTKDTI-AQQLTMRAFMEELRGSGVDTG 123
>CN12L_DROME (Q9VTL1) CSN12-like protein| Length = 395 Score = 29.3 bits (64), Expect = 7.0 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%) Frame = -1 Query: 381 LVFRVCLDLVPLAQPAPKQC--FTP 313 L++RVCLDL LAQ K C FTP Sbjct: 108 LMYRVCLDLRYLAQACEKHCQGFTP 132
>TILS_RHIME (Q92JY3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 453 Score = 29.3 bits (64), Expect = 7.0 Identities = 23/71 (32%), Positives = 34/71 (47%) Frame = -2 Query: 224 LIR*FFNISRFGPLLSFIQASSWSWIDHPGSGP*AVTIALLRLAFATAPVGSVPLTKPLP 45 ++R F ++R + SF+QA SWID P + A +R AT+ G +P PL Sbjct: 172 VLRPFLGLAR-AEIRSFLQARGVSWIDDPSNANPAFERVRVRARIATS--GGMP--TPLG 226 Query: 44 MSRRLILQQAR 12 R+ AR Sbjct: 227 NGRQRAASSAR 237
>TIM44_YEAST (Q01852) Import inner membrane translocase subunit TIM44,| mitochondrial precursor (Mitochondrial protein import protein 1) (Inner membrane import site protein 45) (ISP45) (Membrane import machinery protein MIM44) Length = 431 Score = 29.3 bits (64), Expect = 7.0 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +2 Query: 347 SGTKSRQTLNTRYDPKITGVKVGQXXXXXXASSSRGKQPGSP 472 SGT SR TL RY + TG+ V + + ++G P SP Sbjct: 10 SGTSSR-TLTARYRSQYTGLLVARVLFSTSTTRAQGGNPRSP 50
>GSH1_PSESM (Q88AR1) Glutamate--cysteine ligase (EC 6.3.2.2)| (Gamma-glutamylcysteine synthetase) (Gamma-ECS) (GCS) Length = 529 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +1 Query: 97 SLNRAIVTAYGPEPG*SIHDQDEAWMKLSRGPNRLMLKNQRMS 225 SL +A+ T Y P HDQ+ W++L+ N L ++N+ S Sbjct: 263 SLRKAVATPYKPYVDIGTHDQNGEWVQLN--TNVLQIENEYYS 303 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,553,380 Number of Sequences: 219361 Number of extensions: 1647420 Number of successful extensions: 3909 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3763 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3908 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)