ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2d16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1047 bits (528), Expect = 0.0 Identities = 528/528 (100%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119509 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119450 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119449 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 119390 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119389 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119330 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119329 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119270 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119269 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119210 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119209 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119150 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119149 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 119090 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119089 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 119030 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119029 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118982 Score = 1047 bits (528), Expect = 0.0 Identities = 528/528 (100%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95385 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95444 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95445 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 95504 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95505 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95564 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95565 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95624 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95625 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 95684 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95685 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 95744 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95745 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 95804 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95805 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 95864 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95865 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 95912
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118290 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 118231 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 118230 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 118171 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118170 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 118111 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118110 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 118051 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118050 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 117991 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117990 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 117931 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117930 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 117871 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117870 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 117811 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117810 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 117763
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119374 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119315 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119314 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119255 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119254 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119195 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119194 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119135 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119075 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119074 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119015 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119014 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118955 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118954 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118895 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118894 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118847 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95782 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95841 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95842 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95901 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95902 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95961 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95962 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96021 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96022 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96081 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96141 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96142 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96201 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96202 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96261 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96262 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96309
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119374 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119315 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119314 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119255 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119254 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119195 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119194 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119135 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119075 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119074 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119015 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119014 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118955 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118954 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118895 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118894 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118847 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95782 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95841 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95842 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95901 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95902 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95961 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95962 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96021 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96022 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96081 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96141 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96142 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96201 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96202 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96261 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96262 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96309
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119323 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119264 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119263 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119204 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119203 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119144 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119143 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119084 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119083 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119024 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119023 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118964 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118963 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118904 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118903 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118844 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118843 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118796 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95727 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95786 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95787 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95846 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95847 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95906 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95907 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95966 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95967 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96026 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96027 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96086 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96087 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96146 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96147 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96206 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96207 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96254
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508360 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 31508419 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31508420 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 31508479 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508480 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 31508539 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508540 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 31508599 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508600 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 31508659 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508660 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 31508719 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508720 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 31508779 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508780 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 31508839 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508840 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 31508887 Score = 204 bits (103), Expect = 2e-49 Identities = 103/103 (100%) Strand = Plus / Minus Query: 426 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 486 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 11513215 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 442 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 501 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 502 taaaggaggtggggg 516 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 445 gtcgagagggaaacagcccggatcaccagctaaggccc 482 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 344 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 398 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84236 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 84177 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 84176 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 84117 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84116 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 84057 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84056 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 83997 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83996 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 83937 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83936 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 83877 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83876 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 83817 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83816 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 83757 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83756 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 83709
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119343 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119284 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119283 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119224 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119223 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119164 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119163 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119104 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119103 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119044 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119043 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118984 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118983 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118924 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118923 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118864 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118863 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118816 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95775 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95834 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95835 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95894 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95895 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95954 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95955 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96014 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96015 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96074 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96075 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96134 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96135 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96194 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96195 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96254 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96255 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96302
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14549 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 14608 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14609 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 14668 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14669 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 14728 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14729 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 14788 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14789 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 14848 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14849 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 14908 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14909 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 14968 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14969 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 15028 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15029 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 15076 Score = 1015 bits (512), Expect = 0.0 Identities = 525/528 (99%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122824 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 122883 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122884 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 122943 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122944 gcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatgaaacta 123002 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123003 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 123062 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123063 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 123122 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123123 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 123182 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 123242 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 123302 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 123350
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141357 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 141416 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 141417 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 141476 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141477 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 141536 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141537 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 141596 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141597 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 141656 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141657 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 141716 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141717 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 141776 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141777 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 141836 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141837 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 141884
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93953 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 94012 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 94013 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 94072 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94073 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 94132 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94133 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 94192 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94193 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 94252 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94253 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 94312 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94313 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 94372 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94373 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 94432 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94433 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 94480
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58062 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 58003 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 58002 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 57943 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57942 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 57883 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57882 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 57823 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57822 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 57763 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57762 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 57703 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57702 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 57643 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57642 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 57583 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57582 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 57535
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28017 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 28076 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 28077 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 28136 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28137 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 28196 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28197 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 28256 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28257 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 28316 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28317 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 28376 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28377 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 28436 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28437 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 28496 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28497 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 28544
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268709 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 9268768 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9268769 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9268828 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268829 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 9268888 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268889 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9268948 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268949 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9269008 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269009 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9269068 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269069 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9269128 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269129 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9269188 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269189 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9269236 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056623 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 9056682 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9056683 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9056742 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056743 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 9056802 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056803 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9056862 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056863 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9056922 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056923 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9056982 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056983 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9057042 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057043 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9057102 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057103 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9057150 Score = 1031 bits (520), Expect = 0.0 Identities = 526/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228209 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 9228268 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9228269 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9228328 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228329 gcttatggacccgaacctaggtgatctatccatgaccaggatgaagcttggatgaaacta 9228388 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228389 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9228448 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228449 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9228508 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228509 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9228568 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228569 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9228628 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228629 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9228688 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228689 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9228736 Score = 1015 bits (512), Expect = 0.0 Identities = 525/528 (99%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164798 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 9164857 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9164858 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9164917 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164918 gcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatgaaacta 9164976 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164977 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9165036 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165037 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9165096 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165097 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9165156 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165157 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9165216 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165217 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9165276 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165277 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9165324
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938694 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 19938753 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19938754 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 19938813 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938814 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 19938873 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938874 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 19938933 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938934 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 19938993 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938994 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 19939053 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939054 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 19939113 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939114 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 19939173 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939174 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 19939221 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387561 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 10387620 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10387621 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 10387680 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387681 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10387740 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387741 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10387800 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10387860 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387861 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10387920 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387921 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10387980 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387981 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10388040 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388041 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 10388088 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276737 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 10276678 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10276677 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 10276618 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276617 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10276558 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276557 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10276498 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276497 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10276438 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276437 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10276378 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276377 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10276318 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276317 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10276258 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276257 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 10276210 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 351 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 410 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 411 tcggccagtgagacgatgggggataagcttcatcgtcgagag 452 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598876 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 31598935 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 31598936 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 31598995 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598996 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 31599055 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599056 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 31599115 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599116 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 31599175 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599176 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 31599235 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599236 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 31599295 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599296 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 31599355 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599356 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 31599403 Score = 204 bits (103), Expect = 2e-49 Identities = 103/103 (100%) Strand = Plus / Minus Query: 426 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 486 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 11509978 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 442 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 501 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 502 taaaggaggtggggg 516 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 445 gtcgagagggaaacagcccggatcaccagctaaggccc 482 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 344 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 398 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526192 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 33526251 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 33526252 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 33526311 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526312 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 33526371 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526372 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 33526431 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526432 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 33526491 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526492 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 33526551 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526552 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 33526611 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526612 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 33526671 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526672 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 33526719 Score = 172 bits (87), Expect = 7e-40 Identities = 87/87 (100%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678012 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 16677953 Query: 61 aagggaacggaacccaccggagccgta 87 ||||||||||||||||||||||||||| Sbjct: 16677952 aagggaacggaacccaccggagccgta 16677926 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 435 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 494 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 495 tcagtgataaaggaggtgggggtgcaaagac 525 ||||||||||||||||||||||||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac 527841 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccg 35 ||||||||||||||||||||||||||||||||||| Sbjct: 32744697 gatctctgaccgcgtgcctgttgaagaatgagccg 32744663
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47349 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 47290 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 47289 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 47230 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47229 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 47170 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47169 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 47110 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47109 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 47050 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47049 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 46990 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46989 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 46930 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46929 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 46870 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46869 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 46822
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71389 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 71448 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 71449 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 71508 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71509 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 71568 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71569 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 71628 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71629 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 71688 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71689 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 71748 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71749 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 71808 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71809 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 71868 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71869 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 71916
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 220 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 221 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 280 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 340 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 400 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 460 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 520 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 580 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 640 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 688
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 415 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 416 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 475 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 535 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 595 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 655 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 715 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 775 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 835 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 883
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 286 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 287 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 346 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 406 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 466 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 526 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 586 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 646 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 706 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 754
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 417 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 418 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 477 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 537 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 597 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 657 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 717 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 777 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 837 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 885
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 236 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 237 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 296 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 356 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 416 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 476 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 536 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 596 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 656 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 704
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 415 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 416 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 475 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 535 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 595 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 655 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 715 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 775 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 835 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 883
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 417 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 418 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 477 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 537 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 597 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 657 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 717 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 777 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 837 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 885
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949970 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 19950029 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 19950030 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 19950089 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950090 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 19950149 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950150 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 19950209 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950210 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 19950269 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950270 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 19950329 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950330 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 19950389 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950390 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 19950449 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950450 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 19950497 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393600 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 10393659 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10393660 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 10393719 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393720 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10393779 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393780 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10393839 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393840 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10393899 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393900 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10393959 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393960 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10394019 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394020 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10394079 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394080 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 10394127 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282776 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 10282717 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10282716 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 10282657 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282656 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10282597 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282596 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10282537 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282536 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10282477 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282476 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10282417 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282416 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10282357 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282356 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10282297 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282296 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 10282249 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 351 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 410 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 411 tcggccagtgagacgatgggggataagcttcatcgtcgagag 452 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119317 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 119258 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 119257 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 119198 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119197 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119138 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119137 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119078 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119077 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119018 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119017 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118958 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118957 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118898 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118897 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118838 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118837 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118790 Score = 1039 bits (524), Expect = 0.0 Identities = 527/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95722 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 95781 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95782 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 95841 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95842 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95901 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95902 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95961 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95962 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96021 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96022 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96081 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96141 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96142 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96201 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96202 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96249
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1031 bits (520), Expect = 0.0 Identities = 526/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20784 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 20843 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 20844 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 20903 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20904 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 20963 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20964 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 21023 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21024 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 21083 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21084 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 21143 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21144 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 21203 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21204 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 21263 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21264 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 21311 Score = 993 bits (501), Expect = 0.0 Identities = 523/529 (98%), Gaps = 1/529 (0%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44334 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 44275 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| ||||||| |||||||||||| ||||||||||||| ||||||||||||||||| Sbjct: 44274 aagggaatggaaccctccggagccgtagtgaaagcgagtcttcatagggcgattgtcact 44215 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44214 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 44155 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg- 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44154 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgt 44095 Query: 240 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 299 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 44094 aaatgccactcgaacccagagctagttggttctccccgaaatgcgttgaggcgcagcagt 44035 Query: 300 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44034 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 43975 Query: 360 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43974 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 43915 Query: 420 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43914 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 43855 Query: 480 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43854 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 43806
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1031 bits (520), Expect = 0.0 Identities = 526/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 963 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 904 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 903 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 844 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 784 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 724 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 664 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 604 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 544 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 484 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 436
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1031 bits (520), Expect = 0.0 Identities = 526/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123173 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 123114 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123113 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 123054 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123053 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 122994 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122993 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122934 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122933 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122874 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122873 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 122814 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122813 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 122754 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122753 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 122694 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122693 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 122646 Score = 1031 bits (520), Expect = 0.0 Identities = 526/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99664 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 99723 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99724 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 99783 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99784 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 99843 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99844 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 99903 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99904 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 99963 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99964 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 100023 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100024 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 100083 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100084 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 100143 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100144 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 100191
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1031 bits (520), Expect = 0.0 Identities = 526/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123890 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 123831 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123830 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 123771 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123770 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 123711 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123710 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 123651 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123650 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 123591 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123590 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 123531 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123530 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 123471 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123470 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 123411 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123410 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 123363 Score = 1031 bits (520), Expect = 0.0 Identities = 526/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100341 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 100400 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 100401 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 100460 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100461 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 100520 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100521 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 100580 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100581 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 100640 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100641 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 100700 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100701 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 100760 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100761 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 100820 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100821 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 100868
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1023 bits (516), Expect = 0.0 Identities = 525/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9241572 gatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggtt 9241513 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9241512 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 9241453 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241452 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 9241393 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241392 agcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtga 9241333 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241332 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9241273 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241272 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9241213 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241212 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9241153 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241152 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9241093 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241092 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9241045 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 316 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 375 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 376 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 435 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 436 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 481 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 470 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 516 ||||||||| || ||||||||||||| ||| ||||| |||||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtggggg 3580339 Score = 40.1 bits (20), Expect = 7.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 469 accagctaaggcccctaaatgaccgctcagtgataaagga 508 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1023 bits (516), Expect = 0.0 Identities = 525/528 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 52785 gatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggtt 52726 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 52725 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 52666 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52665 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 52606 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52605 agcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtga 52546 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52545 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 52486 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52485 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 52426 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52425 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 52366 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52365 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 52306 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52305 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 52258
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1023 bits (516), Expect = 0.0 Identities = 525/528 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 414 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 415 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 474 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 475 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacca 534 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 594 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 654 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 714 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 774 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 834 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 835 ccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagc 882
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1009 bits (509), Expect = 0.0 Identities = 515/517 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 527 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 528 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 587 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 647 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 707 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 767 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 827 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 887 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 888 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 947 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggt 517 ||||||||||||||||||||||||||||||| ||||| Sbjct: 948 ccctaaatgaccgctcagtgataaaggaggtaggggt 984
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1007 bits (508), Expect = 0.0 Identities = 524/528 (99%), Gaps = 1/528 (0%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123113 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 123054 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 123053 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 122994 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122993 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 122934 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122933 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122874 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122873 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122814 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122813 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 122755 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122754 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 122695 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122694 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 122635 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122634 cccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 122587 Score = 1007 bits (508), Expect = 0.0 Identities = 524/528 (99%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99624 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 99683 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 99684 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 99743 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99744 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 99803 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99804 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 99863 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99864 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 99923 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 99924 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 99982 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99983 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 100042 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100043 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 100102 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100103 cccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 100150
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1007 bits (508), Expect = 0.0 Identities = 524/528 (99%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5977 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 6036 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 6037 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 6096 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6097 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 6156 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6157 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 6216 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6217 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 6276 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6277 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 6335 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6336 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 6395 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6396 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 6455 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6456 cccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 6503
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1007 bits (508), Expect = 0.0 Identities = 524/528 (99%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 624 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 625 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 684 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 744 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 804 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 864 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 865 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 923 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 983 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1043 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1044 cccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 1091
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 993 bits (501), Expect = 0.0 Identities = 504/505 (99%) Strand = Plus / Plus Query: 24 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 83 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 84 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 143 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 144 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 204 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 264 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 324 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 384 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 444 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481 Query: 504 aaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||| Sbjct: 482 aaggaggtgggggtgcaaagacagc 506
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 991 bits (500), Expect = 0.0 Identities = 503/504 (99%) Strand = Plus / Plus Query: 25 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 85 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 144 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 145 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 205 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 265 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 325 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 385 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 445 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 480 Query: 505 aggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||| Sbjct: 481 aggaggtgggggtgcaaagacagc 504
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 975 bits (492), Expect = 0.0 Identities = 495/496 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 353 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 412 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 413 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 472 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 532 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 592 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 652 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 712 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 772 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 832 Query: 481 ccctaaatgaccgctc 496 |||||||||||||||| Sbjct: 833 ccctaaatgaccgctc 848
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 950 bits (479), Expect = 0.0 Identities = 518/530 (97%), Gaps = 2/530 (0%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg--gcttgg 58 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 122655 gatctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgtggcttgg 122596 Query: 59 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 118 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122595 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 122536 Query: 119 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122535 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 122476 Query: 179 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 238 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122475 taagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 122416 Query: 239 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122415 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 122356 Query: 299 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122355 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 122296 Query: 359 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 418 | |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 122295 ttgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccag 122236 Query: 419 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 478 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122235 tgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaag 122176 Query: 479 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122175 gcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagc 122126
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 950 bits (479), Expect = 0.0 Identities = 518/530 (97%), Gaps = 2/530 (0%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg--gcttgg 58 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 12825196 gatctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgtggcttgg 12825137 Query: 59 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 118 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825136 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 12825077 Query: 119 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825076 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 12825017 Query: 179 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 238 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825016 taagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 12824957 Query: 239 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824956 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 12824897 Query: 299 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824896 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 12824837 Query: 359 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 418 | |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 12824836 ttgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccag 12824777 Query: 419 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 478 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12824776 tgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaag 12824717 Query: 479 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12824716 gcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagc 12824667
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 620 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 621 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 680 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 740 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 800 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 860 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 920 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 980 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1040 Query: 481 cc 482 || Sbjct: 1041 cc 1042
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 920 bits (464), Expect = 0.0 Identities = 512/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141549 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 141490 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 141489 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcact 141435 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141434 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 141375 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141374 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 141315 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141314 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 141255 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 141254 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 141195 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 141194 gaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtg 141135 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141134 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 141075 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 141074 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 141027 Score = 920 bits (464), Expect = 0.0 Identities = 512/528 (96%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112108 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 112167 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 112168 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcact 112222 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112223 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 112282 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112283 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 112342 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112343 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 112402 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 112403 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 112462 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 112463 gaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtg 112522 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112523 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 112582 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 112583 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 112630
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 914 bits (461), Expect = 0.0 Identities = 509/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131046 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 130992 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130991 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 130932 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130931 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 130872 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130871 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 130812 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 130811 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130752 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130751 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 130692 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130691 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130632 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 130631 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 130587 Score = 914 bits (461), Expect = 0.0 Identities = 509/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 103589 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 103643 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103644 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 103703 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103704 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 103763 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103764 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 103823 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 103824 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 103883 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103884 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 103943 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103944 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104003 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 104004 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104048
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 914 bits (461), Expect = 0.0 Identities = 509/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 622 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 676 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 677 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 736 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 796 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 856 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 857 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 916 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 917 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 976 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1036 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1037 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1081
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 912 bits (460), Expect = 0.0 Identities = 512/528 (96%), Gaps = 6/528 (1%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133664 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 133605 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 133604 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 133550 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133549 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 133490 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133489 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 133430 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133429 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 133370 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 133369 gactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 133310 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 133309 gaggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtg 133251 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133250 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 133191 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 133190 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 133143 Score = 912 bits (460), Expect = 0.0 Identities = 512/528 (96%), Gaps = 6/528 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104307 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 104366 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104367 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 104421 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104422 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 104481 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104482 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 104541 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104542 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 104601 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 104602 gactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 104661 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 104662 gaggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtg 104720 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104721 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 104780 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 104781 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104828
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138883 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 138829 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138828 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138769 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138768 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138709 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138708 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138649 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138648 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138589 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 138588 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 138529 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138528 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138469 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138468 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138424 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110214 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110268 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110269 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110328 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110329 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110388 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110448 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110449 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110508 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 110509 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 110568 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110569 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110628 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110629 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110673
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132154 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132100 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132099 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132040 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132039 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131980 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131979 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131920 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131919 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131860 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131859 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131800 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131799 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131740 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 131739 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 131695 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104724 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104778 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104779 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104838 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104898 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104958 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104959 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105018 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105019 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105078 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105138 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 105139 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 105183
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 136318 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 136317 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 136263 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 136203 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136202 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 136143 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136142 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 136083 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 136082 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 136023 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 136022 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135963 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135962 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135903 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135902 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135858 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 107239 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107240 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107294 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107295 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107354 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107355 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107414 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107415 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107474 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107475 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107534 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107535 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107594 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107595 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107654 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107655 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107699
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 142259 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 142258 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 142204 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 142144 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142143 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 142084 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142083 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 142024 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 142023 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 141964 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 141963 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 141904 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141903 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 141844 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 141843 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagc 141799 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 111069 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 111070 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 111124 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111125 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 111184 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111185 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 111244 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111245 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 111304 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 111305 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 111364 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 111365 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 111424 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111425 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 111484 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 111485 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagc 111529
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134926 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134925 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134871 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134870 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134811 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134810 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134751 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134750 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134691 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134690 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134631 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134630 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134571 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134570 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134511 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134510 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134466 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106110 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106111 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106165 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106225 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106285 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106345 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106346 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106405 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106406 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106465 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106525 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106526 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106570
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135972 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135971 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135917 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135916 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135857 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135856 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135797 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135796 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135737 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135736 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135677 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135676 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135617 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135557 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135556 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135512 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106453 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106454 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106508 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106509 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106568 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106628 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106688 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106689 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106748 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106749 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106808 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106809 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106868 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106869 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106913
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135061 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135060 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135006 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135005 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134946 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134945 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134886 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134885 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134826 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134825 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134766 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134765 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134706 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134705 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134646 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134645 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134601 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106282 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106283 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106337 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106338 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106397 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106398 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106457 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106458 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106517 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106518 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106577 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106578 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106637 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106638 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106697 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106698 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106742
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135059 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135058 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135004 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135003 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134944 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134943 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134884 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134883 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134824 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134823 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134764 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134763 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134704 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134703 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134644 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134643 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134599 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106279 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106334 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106335 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106394 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106454 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106514 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106515 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106574 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106575 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106634 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106635 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106694 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106695 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106739
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134971 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134970 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134916 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134915 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134856 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134855 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134796 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134736 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134735 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134676 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134675 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134616 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134615 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134556 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134555 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134511 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106157 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106158 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106212 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106213 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106272 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106273 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106332 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106333 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106392 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106393 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106452 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106453 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106512 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106513 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106572 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106573 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106617
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132147 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132093 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132092 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132033 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132032 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131973 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131972 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131913 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131912 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131853 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131852 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131793 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131792 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131733 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 131732 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 131688 Score = 906 bits (457), Expect = 0.0 Identities = 508/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104722 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104776 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104777 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104836 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104837 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104896 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104897 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104956 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104957 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105016 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105017 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105076 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105077 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105136 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 105137 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 105181
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 902 bits (455), Expect = 0.0 Identities = 506/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Minus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131228 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 131169 Query: 66 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 125 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 131168 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 131114 Query: 126 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 185 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 131113 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 131054 Query: 186 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131053 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 130994 Query: 246 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130993 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 130934 Query: 306 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 365 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 130933 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 130874 Query: 366 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 425 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130873 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 130814 Query: 426 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130813 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 130754 Query: 486 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 130753 aatgaccgctcagtgataaaggaggtaggggtgcagagacagc 130711 Score = 902 bits (455), Expect = 0.0 Identities = 506/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102217 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 102276 Query: 66 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 125 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 102277 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 102331 Query: 126 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 185 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 102332 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 102391 Query: 186 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102392 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 102451 Query: 246 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102452 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 102511 Query: 306 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 365 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 102512 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 102571 Query: 366 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 425 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102572 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 102631 Query: 426 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102632 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102691 Query: 486 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 102692 aatgaccgctcagtgataaaggaggtaggggtgcagagacagc 102734
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135680 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135679 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135625 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135624 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135565 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135564 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135505 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135504 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135445 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135444 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135385 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135384 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135325 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135324 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135265 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 135264 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 135220 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106950 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106951 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107005 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107006 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107065 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107066 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107125 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107126 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107185 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107186 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107245 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107246 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107305 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107306 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107365 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 107366 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 107410
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135226 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135225 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135166 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135106 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135105 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135046 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135045 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134986 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 134985 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 134926 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134866 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134865 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134821 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106626 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106680 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106681 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106740 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106800 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106801 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106860 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106861 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106920 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 106921 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 106980 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107040 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107041 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107085
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2144 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2145 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2199 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2200 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2259 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 2319 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2320 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 2379 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2380 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 2439 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 2440 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 2499 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2500 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 2559 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 2560 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 2604
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135559 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135505 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135504 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135445 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135444 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135385 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135384 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135325 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135324 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135265 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 135264 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 135205 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135204 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135145 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135144 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135100 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106848 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106902 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106903 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106962 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106963 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107022 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107023 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107082 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107083 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107142 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 107143 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 107202 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107203 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107262 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107263 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107307
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135678 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135677 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135623 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135622 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135563 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135562 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135503 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135502 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135443 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135442 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135383 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135382 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135323 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135322 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135263 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 135262 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 135218 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106948 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106949 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107003 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107004 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107063 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107064 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107123 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107183 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107184 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107243 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107244 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107303 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107304 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107363 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 107364 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 107408
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135409 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135408 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135354 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135353 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135294 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135234 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135233 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135174 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135173 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135114 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135113 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135054 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135053 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134994 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 134993 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 134949 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106729 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106730 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106784 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106785 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106844 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106845 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106904 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106905 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106964 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106965 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107024 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107025 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107084 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107085 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107144 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 107145 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 107189
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139088 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139034 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139033 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138974 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138973 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138914 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138913 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138854 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138853 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138794 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 138793 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 138734 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138733 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138674 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138673 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138629 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110211 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110265 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110266 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110325 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110326 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110385 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110386 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110445 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110446 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110505 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 110506 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 110565 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110566 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110625 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110626 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110670
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 898 bits (453), Expect = 0.0 Identities = 507/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 718 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 772 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 773 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 832 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 892 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 952 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 953 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1012 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 1013 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 1072 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1132 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1133 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 1177
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 890 bits (449), Expect = 0.0 Identities = 512/533 (96%), Gaps = 10/533 (1%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139027 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 138968 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 138967 aagggaac-----ccaccggagccatagcgaaagcgagtcttcatagggcaattgtcact 138913 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138912 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 138853 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138852 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 138793 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138792 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 138733 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 138732 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 138673 Query: 361 gaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggc 415 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138672 gaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggc 138613 Query: 416 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138612 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 138553 Query: 476 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138552 aaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138500 Score = 890 bits (449), Expect = 0.0 Identities = 512/533 (96%), Gaps = 10/533 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110918 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 110977 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||||| Sbjct: 110978 aagggaac-----ccaccggagccatagcgaaagcgagtcttcatagggcaattgtcact 111032 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111033 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 111092 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111093 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 111152 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111153 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 111212 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 111213 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 111272 Query: 361 gaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggc 415 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111273 gaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggc 111332 Query: 416 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111333 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 111392 Query: 476 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 111393 aaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 111445
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134997 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 134938 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134937 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134883 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134882 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134823 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134822 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134763 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134762 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134703 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134702 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134643 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134642 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134583 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134582 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134523 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134522 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134478 Score = 890 bits (449), Expect = 0.0 Identities = 506/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106065 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 106124 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106125 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106179 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106180 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106239 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106299 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106300 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106359 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106360 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106419 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106420 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106479 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106480 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106539 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106540 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106584
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 886 bits (447), Expect = 0.0 Identities = 508/528 (96%), Gaps = 9/528 (1%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127305 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 127246 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 127245 aagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcact 127191 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127190 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 127131 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127130 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 127071 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127070 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 127011 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 127010 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 126951 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 126950 gaggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcggccagtg 126895 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126894 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 126835 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 126834 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 126787 Score = 886 bits (447), Expect = 0.0 Identities = 508/528 (96%), Gaps = 9/528 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107617 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 107676 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 107677 aagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcact 107731 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107732 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 107791 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107792 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 107851 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107852 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 107911 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 107912 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 107971 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 107972 gaggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcggccagtg 108027 Query: 421 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108028 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 108087 Query: 481 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 108088 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 108135
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 620 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 674 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 734 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 794 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 914 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 915 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 974 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1034 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1035 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1079
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132377 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132323 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132322 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 132263 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132262 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 132203 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132202 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 132143 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 132142 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 132083 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 132082 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132023 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132022 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131963 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 131962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 131918 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104387 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104441 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104442 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 104501 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104502 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 104561 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104562 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104621 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104622 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104681 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 104682 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 104741 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104742 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104801 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 104802 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104846
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133338 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 133284 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133283 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 133224 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133223 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 133164 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133163 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 133104 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 133103 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 133044 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 133043 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132984 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132983 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 132924 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 132923 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 132879 Score = 882 bits (445), Expect = 0.0 Identities = 505/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105311 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 105365 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105366 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 105425 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105426 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 105485 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 105545 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 105546 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105605 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 105606 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 105665 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105666 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105725 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 105726 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 105770
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 878 bits (443), Expect = 0.0 Identities = 503/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 131246 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 131192 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131191 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 131132 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131131 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131072 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131071 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131012 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131011 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130952 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130951 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 130892 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130891 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130832 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 130831 taaatgaccgctcagtgataaaggaggtaggggtgcagagaca 130789 Score = 878 bits (443), Expect = 0.0 Identities = 503/523 (96%), Gaps = 5/523 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 104148 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 104202 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104262 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104263 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104322 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104323 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104382 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104383 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104442 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 104443 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 104502 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104503 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104562 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 104563 taaatgaccgctcagtgataaaggaggtaggggtgcagagaca 104605
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 876 bits (442), Expect = 0.0 Identities = 506/526 (96%), Gaps = 6/526 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1116 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 1170 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1171 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 1230 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 gagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 1290 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 1350 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1351 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1410 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1411 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 1470 Query: 424 cgat-gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 482 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 cgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1530 Query: 483 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1531 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1576
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 567 ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag 626 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 627 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 681 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 682 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 741 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 801 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 861 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 862 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 921 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 922 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 981 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 982 cgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1041 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1042 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1086
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 874 bits (441), Expect = 0.0 Identities = 504/525 (96%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 629 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 683 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 684 tatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagt 743 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 803 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 863 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 864 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 923 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 924 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 983 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 caatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1043 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||| ||||||||||||| |||||||| ||||||| Sbjct: 1044 taaatgaccgctcaatgataaaggaggtaggggtgcacagacagc 1088
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 866 bits (437), Expect = 0.0 Identities = 504/527 (95%), Gaps = 12/527 (2%) Strand = Plus / Minus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134425 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134366 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134365 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134311 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134310 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 134251 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134250 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134191 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134190 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 134131 Query: 302 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 361 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 134130 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 134071 Query: 362 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 421 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 134070 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 134018 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134017 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 133958 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 133957 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 133911 Score = 866 bits (437), Expect = 0.0 Identities = 504/527 (95%), Gaps = 12/527 (2%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 105916 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105917 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 105971 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105972 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 106031 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 106091 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106092 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 106151 Query: 302 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 361 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 106152 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 106211 Query: 362 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 421 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 106212 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 106264 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106265 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 106324 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106325 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106371
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 862 bits (435), Expect = 0.0 Identities = 507/527 (96%), Gaps = 8/527 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2388 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2389 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2443 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2444 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2503 Query: 184 agagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 242 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2504 ggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 2563 Query: 243 tg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2564 tggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 2623 Query: 302 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 361 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 2624 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 2683 Query: 362 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 421 ||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| Sbjct: 2684 aggcaaactctgaatactagatatgactc-aaaataacaggggtcaaggtcggctagtga 2742 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2743 gacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcc 2802 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2803 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 2849
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%), Gaps = 5/525 (0%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 129495 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 129494 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 129450 Score = 858 bits (433), Expect = 0.0 Identities = 502/525 (95%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 102961 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 102962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 103006
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 841 bits (424), Expect = 0.0 Identities = 501/525 (95%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1055 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1056 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1100
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 839 bits (423), Expect = 0.0 Identities = 499/525 (95%), Gaps = 12/525 (2%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 513 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 514 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 558
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 839 bits (423), Expect = 0.0 Identities = 499/525 (95%), Gaps = 12/525 (2%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139739 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139685 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139684 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 139625 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139624 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 139565 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139564 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 139505 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 139504 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 139445 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 139444 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 139392 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139391 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 139332 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 139331 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 139287 Score = 839 bits (423), Expect = 0.0 Identities = 499/525 (95%), Gaps = 12/525 (2%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110321 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110375 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110376 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110435 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110436 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110495 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110496 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 110555 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110556 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110615 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 110616 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 110668 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110669 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110728 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110729 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110773
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 831 bits (419), Expect = 0.0 Identities = 498/525 (94%), Gaps = 12/525 (2%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 529 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 530 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 574
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 831 bits (419), Expect = 0.0 Identities = 473/491 (96%), Gaps = 5/491 (1%) Strand = Plus / Plus Query: 38 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 97 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 98 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 157 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 158 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 217 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 218 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 278 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 338 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 397 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 398 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 457 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 458 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 1066 Query: 518 gcaaagacagc 528 ||||||||||| Sbjct: 1067 gcaaagacagc 1077
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 829 bits (418), Expect = 0.0 Identities = 501/526 (95%), Gaps = 7/526 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 64 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 122 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 123 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 182 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 183 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 243 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 303 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 362 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 363 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 422 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 423 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 483 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1055 ctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagc 1100
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 829 bits (418), Expect = 0.0 Identities = 501/526 (95%), Gaps = 7/526 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 364 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 422 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 423 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 482 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccc 177878 Query: 483 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 177879 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 177924 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 477 aggcccctaaatgaccgctcag 498 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 gtcgagagggaaacagcccggatc 468 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 gtcgagagggaaacagcccggatc 468 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 827 bits (417), Expect = 0.0 Identities = 499/525 (95%), Gaps = 6/525 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1054 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1055 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1099
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 817 bits (412), Expect = 0.0 Identities = 418/420 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 361 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 360 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 301 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 241 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 181 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 121 Query: 301 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 61 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 813 bits (410), Expect = 0.0 Identities = 498/526 (94%), Gaps = 6/526 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||| |||||||||||||| || ||||| | |||||||||||| Sbjct: 620 ggaac-----ccaccggagccatagcgaaagcgagtattcataggactattgtcactgct 674 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagt 734 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 794 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 914 Query: 364 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 422 |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 915 gcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgag 974 Query: 423 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 482 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 975 acgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 1034 Query: 483 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1035 ctaattgatcgctcagtgataaaggaggtaggggtgcagagacagc 1080
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 813 bits (410), Expect = 0.0 Identities = 496/525 (94%), Gaps = 11/525 (2%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccc 1049 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1050 taaatgaccgctcagtgataaaggaggtaggggtgcaaagacagc 1094
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 809 bits (408), Expect = 0.0 Identities = 447/460 (97%) Strand = Plus / Plus Query: 69 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 128 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 129 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 188 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 189 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 249 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 309 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 368 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 369 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 428 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 429 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 489 gaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||| |||||||||||||||| |||||||| ||||||| Sbjct: 1022 gaccgcccagtgataaaggaggtaggggtgcagagacagc 1061
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 7/527 (1%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52125 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 52066 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 52065 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 52011 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52010 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 51951 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51950 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 51891 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51890 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 51831 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 51830 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 51771 Query: 364 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 422 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 51770 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 51711 Query: 423 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51710 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 51651 Query: 483 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 528 |||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 51650 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 51604 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 7/527 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37703 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 37762 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 37763 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 37817 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37818 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 37877 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37878 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 37937 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37938 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 37997 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 37998 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 38057 Query: 364 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 422 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 38058 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 38117 Query: 423 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38118 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 38177 Query: 483 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 528 |||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 38178 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 38224
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 807 bits (407), Expect = 0.0 Identities = 499/527 (94%), Gaps = 7/527 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4631 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 4690 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 4691 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 4745 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4746 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 4805 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4806 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 4865 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4866 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 4925 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 4926 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 4985 Query: 364 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 422 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 4986 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 5045 Query: 423 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5046 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 5105 Query: 483 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagc 528 |||| ||| ||||||||||||||||||| | |||||||| ||||||| Sbjct: 5106 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagc 5152
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 787 bits (397), Expect = 0.0 Identities = 498/529 (94%), Gaps = 7/529 (1%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 561 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 620 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 621 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 675 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 735 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 419 ||||||||||||||||||||||||||| || |||||||||||| | |||||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtcaaccagt 975 Query: 420 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 479 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 1035 Query: 480 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 1036 cccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 1084
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 755 bits (381), Expect = 0.0 Identities = 494/529 (93%), Gaps = 7/529 (1%) Strand = Plus / Minus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117588 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 117529 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 117528 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 117474 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 117414 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117413 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 117354 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117353 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117294 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117293 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 117234 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 419 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 117233 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 117174 Query: 420 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 479 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 117173 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 117114 Query: 480 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||| |||| |||||||||| || ||||||||||||| Sbjct: 117113 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagc 117065 Score = 755 bits (381), Expect = 0.0 Identities = 494/529 (93%), Gaps = 7/529 (1%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90514 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 90573 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 90574 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 90628 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 90688 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90689 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 90748 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90749 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 90808 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 90809 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 90868 Query: 361 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 419 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 90869 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 90928 Query: 420 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 479 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 90929 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 90988 Query: 480 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||| |||| |||||||||| || ||||||||||||| Sbjct: 90989 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagc 91037
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 751 bits (379), Expect = 0.0 Identities = 494/529 (93%), Gaps = 10/529 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86823 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 86882 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 86883 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 86937 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86938 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 86997 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86998 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 87057 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87058 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 87117 Query: 301 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 87118 gactggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaat 87177 Query: 360 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 419 |||||||||||||||||||||||| || ||| ||||| |||||| | |||| ||||| Sbjct: 87178 cgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagt 87233 Query: 420 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 479 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 87234 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 87293 Query: 480 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 87294 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagc 87342
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 747 bits (377), Expect = 0.0 Identities = 464/489 (94%), Gaps = 8/489 (1%) Strand = Plus / Plus Query: 44 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 102 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 103 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 160 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 161 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 220 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 221 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 280 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 340 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 399 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 400 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 459 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 460 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 519 |||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgc 1088 Query: 520 aaagacagc 528 | ||||||| Sbjct: 1089 agagacagc 1097
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 424 cgatgggggataagctt 440 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 743 bits (375), Expect = 0.0 Identities = 433/451 (96%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 64 ggaacggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgc 122 ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 364803 ggaac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgc 364857 Query: 123 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 182 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364858 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Query: 183 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 242 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364918 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 364977 Query: 243 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364978 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 365037 Query: 303 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 362 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 365038 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 365097 Query: 363 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 422 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 365098 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 365157 Query: 423 acgatgggggataagcttcatcgtcgagagg 453 ||| ||||||||||||||||||||||||||| Sbjct: 365158 acggtgggggataagcttcatcgtcgagagg 365188 Score = 121 bits (61), Expect = 2e-24 Identities = 76/81 (93%) Strand = Plus / Minus Query: 448 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 507 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 508 aggtgggggtgcaaagacagc 528 |||| |||||||| ||||||| Sbjct: 129287 aggtaggggtgcagagacagc 129267 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gtcgagagggaaacagcccggatc 468 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 741 bits (374), Expect = 0.0 Identities = 498/535 (93%), Gaps = 12/535 (2%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 145999 gatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 145940 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 145939 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 145885 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 145884 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 145825 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 145824 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 145765 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145764 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 145705 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 145704 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 145645 Query: 360 cgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcg 413 |||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 145644 cgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtca 145585 Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 145584 gccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 145525 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||| | |||||||| || ||||| ||||||| Sbjct: 145524 ctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagc 145470 Score = 741 bits (374), Expect = 0.0 Identities = 498/535 (93%), Gaps = 12/535 (2%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 112463 gatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 112522 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 112523 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 112577 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112578 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 112637 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 112638 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 112697 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112698 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 112757 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112758 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 112817 Query: 360 cgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcg 413 |||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 112818 cgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtca 112877 Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 112878 gccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 112937 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||| | |||||||| || ||||| ||||||| Sbjct: 112938 ctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagc 112992
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 741 bits (374), Expect = 0.0 Identities = 493/530 (93%), Gaps = 7/530 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||| Sbjct: 560 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtt 619 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||| || ||||||||||||||||||||||||||||| | |||| ||||||||| Sbjct: 620 aaggggac-----ccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcact 674 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 675 acttatggacccgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaacta 734 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 735 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 794 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 854 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 855 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 914 Query: 360 cgaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccag 418 |||||||||||||||||||||||||||| | |||||| |||| | | |||| |||| Sbjct: 915 cgaggcaaactctgaatactagatatgatctccgaataacgggggataagggtcaaccag 974 Query: 419 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 478 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 975 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 1034 Query: 479 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 1035 gcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 1084
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 726 bits (366), Expect = 0.0 Identities = 491/529 (92%), Gaps = 9/529 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 88909 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 88968 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 88969 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 89023 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89024 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 89083 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 89084 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 89143 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89144 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 89203 Query: 301 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 ||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 89204 gactggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaat 89263 Query: 360 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 419 |||||||||||||||||||||||| | ||||| | || ||||| | |||| ||||| Sbjct: 89264 cgaggcaaactctgaatactagat-taccccaata--aaagggggtaagggtcaaccagt 89320 Query: 420 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 479 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 89321 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 89380 Query: 480 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 89381 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagc 89429
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 716 bits (361), Expect = 0.0 Identities = 488/529 (92%), Gaps = 6/529 (1%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 127881 gatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtt 127822 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 127821 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 127767 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 127766 gctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaacta 127707 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 127706 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 127647 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127646 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 127587 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 ||| |||| | |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 127586 gaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 127527 Query: 360 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 419 |||||||||||||||||||||| |||||||| || ||| ||| | |||| ||||| Sbjct: 127526 cgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagt 127467 Query: 420 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 479 |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 127466 gagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaagg 127407 Query: 480 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||| |||||||| |||||||||| || ||||||||||||| Sbjct: 127406 cccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagc 127358 Score = 716 bits (361), Expect = 0.0 Identities = 488/529 (92%), Gaps = 6/529 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 95566 gatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtt 95625 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 95626 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 95680 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 95681 gctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaacta 95740 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95741 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 95800 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 95860 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 ||| |||| | |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95861 gaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 95920 Query: 360 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 419 |||||||||||||||||||||| |||||||| || ||| ||| | |||| ||||| Sbjct: 95921 cgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagt 95980 Query: 420 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 479 |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 95981 gagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaagg 96040 Query: 480 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||| |||||||| |||||||||| || ||||||||||||| Sbjct: 96041 cccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagc 96089
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 702 bits (354), Expect = 0.0 Identities = 488/530 (92%), Gaps = 7/530 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 564 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 623 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| |||||||||||||||||||||| |||||| | |||| ||||||||| Sbjct: 624 aagggaac-----ccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcact 678 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 679 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 738 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 739 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 798 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 858 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 859 gactagactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 918 Query: 360 cgaggcaaactctgaatactagatatgacccaaaaataacag-gggtcaaggtcggccag 418 |||||||||||||||||||| |||| ||| | ||||| || | || | |||| |||| Sbjct: 919 cgaggcaaactctgaatactggataggactccctaataatagagagtaagggtcaaccag 978 Query: 419 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 478 |||||| ||||||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 979 tgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaag 1038 Query: 479 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||| |||| |||||||||| || ||||||||||||| Sbjct: 1039 gcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagc 1088
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 4851 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 4905 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4906 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 4965 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4966 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5025 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5026 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5085 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5086 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5145 Query: 364 gcaaactctgaatactagatat 385 |||||||||||||||||||||| Sbjct: 5146 gcaaactctgaatactagatat 5167 Score = 196 bits (99), Expect = 5e-47 Identities = 114/119 (95%) Strand = Plus / Plus Query: 410 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 470 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagc 5300
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 23074 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 23020 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23019 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 22960 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 22959 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 22900 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 22840 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 22839 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 22780 Query: 364 gcaaactctgaatactagatat 385 |||||||||||||||||||||| Sbjct: 22779 gcaaactctgaatactagatat 22758 Score = 196 bits (99), Expect = 5e-47 Identities = 114/119 (95%) Strand = Plus / Minus Query: 410 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 470 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagc 22625
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 364 gcaaactctgaatactagatatgaccc 390 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 198 bits (100), Expect = 1e-47 Identities = 122/128 (95%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 402 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 460 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 461 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 521 aagacagc 528 ||||||| Sbjct: 5565 gagacagc 5572
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 364 gcaaactctgaatactagatatgaccc 390 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 198 bits (100), Expect = 1e-47 Identities = 122/128 (95%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 402 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 460 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 461 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 521 aagacagc 528 ||||||| Sbjct: 5565 gagacagc 5572
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Minus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 115650 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 115591 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 115590 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 115536 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 115535 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 115476 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115475 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 115416 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115415 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 115356 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 115355 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 115296 Query: 361 gaggcaaactctgaatactag 381 ||||||||||||||||||||| Sbjct: 115295 gaggcaaactctgaatactag 115275 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 86470 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 86529 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 86530 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 86584 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86585 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 86644 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86645 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 86704 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86705 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 86764 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86765 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 86824 Query: 361 gaggcaaactctgaatactag 381 ||||||||||||||||||||| Sbjct: 86825 gaggcaaactctgaatactag 86845 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 4449 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 4508 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 4509 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 4563 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4564 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 4623 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4624 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 4683 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4684 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 4743 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4744 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 4803 Query: 360 cgaggcaaactctgaatactagatatg 386 |||||||||||||||||||||| |||| Sbjct: 4804 cgaggcaaactctgaatactaggtatg 4830 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 360 cgaggcaaactctgaatactagatatg 386 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 150686 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 150627 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 150626 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 150572 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150571 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 150512 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 150511 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 150452 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150451 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 150392 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150391 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 150332 Query: 360 cgaggcaaactctgaatactagatatg 386 |||||||||||||||||||||| |||| Sbjct: 150331 cgaggcaaactctgaatactaggtatg 150305 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 117980 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 118039 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 118040 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 118094 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118095 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 118154 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118155 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 118214 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118215 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 118274 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118275 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 118334 Query: 360 cgaggcaaactctgaatactagatatg 386 |||||||||||||||||||||| |||| Sbjct: 118335 cgaggcaaactctgaatactaggtatg 118361 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Minus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 360 cgaggcaaactctgaatactagatatg 386 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 174 bits (88), Expect = 2e-40 Identities = 112/120 (93%) Strand = Plus / Plus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 597 bits (301), Expect = e-167 Identities = 472/525 (89%), Gaps = 8/525 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 1039 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||||||||||| ||| ||||||||||| |||||||| ||||| Sbjct: 1040 cctaaatgaccgctaagttataaaggaggtaggggtgcatagaca 1084
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 595 bits (300), Expect = e-167 Identities = 475/531 (89%), Gaps = 8/531 (1%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||| Sbjct: 138708 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggtt 138649 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| ||||| | |||| || Sbjct: 138648 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgct 138594 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 138593 gcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacca 138534 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 138533 ggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtga 138474 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138473 aatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 138414 Query: 301 gact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 138413 gactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaac 138354 Query: 360 cgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggcca 417 |||||||||||||||||||| | |||| ||| | | | ||| |||| ||||||||||| Sbjct: 138353 cgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcca 138294 Query: 418 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 477 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 138293 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 138234 Query: 478 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| ||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 138233 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagc 138183 Score = 595 bits (300), Expect = e-167 Identities = 475/531 (89%), Gaps = 8/531 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||| Sbjct: 83169 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggtt 83228 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||| ||||||||||||||||||||||||||||| ||||| | |||| || Sbjct: 83229 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgct 83283 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 83284 gcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacca 83343 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 83344 ggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtga 83403 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 83404 aatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 83463 Query: 301 gact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 83464 gactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaac 83523 Query: 360 cgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggcca 417 |||||||||||||||||||| | |||| ||| | | | ||| |||| ||||||||||| Sbjct: 83524 cgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcca 83583 Query: 418 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 477 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 83584 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 83643 Query: 478 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||| ||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 83644 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagc 83694
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 591 bits (298), Expect = e-166 Identities = 365/385 (94%), Gaps = 3/385 (0%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 543 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 602 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| | | ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 603 aagggaaagaa--ccaccggagccatagcgaaagcgagtcttcccagggcaattgtcact 660 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 661 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 720 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 721 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 780 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 781 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcaacagtt 840 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 841 gactggactatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaat 900 Query: 360 cgaggcaaactctgaatactagata 384 |||||||||||||||||||| |||| Sbjct: 901 cgaggcaaactctgaatactggata 925 Score = 163 bits (82), Expect = 7e-37 Identities = 106/114 (92%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagc 1068
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 589 bits (297), Expect = e-165 Identities = 336/349 (96%), Gaps = 5/349 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 150 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 204 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 264 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 324 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 325 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 384 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 352 ||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 385 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 569 bits (287), Expect = e-159 Identities = 323/335 (96%), Gaps = 5/335 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 146 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 200 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 260 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 320 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 321 gccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgac 380 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgg 338 ||||||||||||||||||||||||||||||||||| Sbjct: 381 tggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 543 bits (274), Expect = e-151 Identities = 280/282 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75141 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 75082 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 75081 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 75022 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75021 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 74962 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74961 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 74902 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatg 282 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 74901 aatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 gtcgagagggaaacagcccggatc 468 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 543 bits (274), Expect = e-151 Identities = 280/282 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382397 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 382456 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 382457 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 382516 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382517 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 382576 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382577 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 382636 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatg 282 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 382637 aatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gtcgagagggaaacagcccggatc 468 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 445 gtcgagagggaaacagcccggatc 468 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 543 bits (274), Expect = e-151 Identities = 280/282 (99%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113232 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 113173 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 113172 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 113113 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113112 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 113053 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113052 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 112993 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatg 282 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112992 aatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 gtcgagagggaaacagcccggatc 468 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 543 bits (274), Expect = e-151 Identities = 283/286 (98%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367914 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 367855 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 367854 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 367795 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367794 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 367735 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367734 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 367675 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 286 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367674 aatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 543 bits (274), Expect = e-151 Identities = 283/286 (98%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184519 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 184460 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 184459 aagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 184400 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184399 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 184340 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184339 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 184280 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 286 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184279 aatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 445 gtcgagagggaaacagcccggatc 468 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 523 bits (264), Expect = e-145 Identities = 357/384 (92%), Gaps = 3/384 (0%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 144479 gatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggtt 144538 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||| | ||||| |||||||||||||||||||||||||| | |||| |||||||| Sbjct: 144539 aagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcacc 144596 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 144597 gcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 144656 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 144657 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 144716 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144717 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 144776 Query: 301 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||| || |||||||||||||||||| ||| |||||||||||||| |||||||||||||| Sbjct: 144777 gactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaat 144836 Query: 360 cgaggcaaactctgaatactagat 383 |||||||||||||||||||||||| Sbjct: 144837 cgaggcaaactctgaatactagat 144860 Score = 523 bits (264), Expect = e-145 Identities = 357/384 (92%), Gaps = 3/384 (0%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 88372 gatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggtt 88313 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||||| | ||||| |||||||||||||||||||||||||| | |||| |||||||| Sbjct: 88312 aagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcacc 88255 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 88254 gcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 88195 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 88194 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 88135 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 88075 Query: 301 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||| || |||||||||||||||||| ||| |||||||||||||| |||||||||||||| Sbjct: 88074 gactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaat 88015 Query: 360 cgaggcaaactctgaatactagat 383 |||||||||||||||||||||||| Sbjct: 88014 cgaggcaaactctgaatactagat 87991 Score = 170 bits (86), Expect = 3e-39 Identities = 107/114 (93%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 145012 Score = 170 bits (86), Expect = 3e-39 Identities = 107/114 (93%) Strand = Plus / Minus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 87839
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 521 bits (263), Expect = e-145 Identities = 359/387 (92%), Gaps = 8/387 (2%) Strand = Plus / Minus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 |||| || |||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 agggcac-----ccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 122 ctt-atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaacta 5814 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 5813 agtagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtga 5754 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5753 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 5694 Query: 301 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 ||||||| | ||||||||||||||||||||||||| ||| | | |||||||| | || Sbjct: 5693 gactggaccgtctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacat 5634 Query: 360 cgaggcaaactctgaatactagatatg 386 ||||||||||| ||||||||||||||| Sbjct: 5633 cgaggcaaactatgaatactagatatg 5607 Score = 143 bits (72), Expect = 7e-31 Identities = 108/120 (90%) Strand = Plus / Minus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 488 bits (246), Expect = e-134 Identities = 276/286 (96%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 594 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 595 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 649 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 650 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 709 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 769 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 289 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 484 bits (244), Expect = e-133 Identities = 341/372 (91%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 157 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 216 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 217 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 276 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 277 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 336 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 337 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 396 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 397 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 456 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 457 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 516 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 517 tgcaaagacagc 528 |||||||||||| Sbjct: 2752 tgcaaagacagc 2741 Score = 157 bits (79), Expect = 4e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 124 tatggacccgaacct 138 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 484 bits (244), Expect = e-133 Identities = 349/381 (91%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 560 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 619 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 620 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 674 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 675 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 734 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 735 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 794 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 795 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 854 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 855 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 914 Query: 361 gaggcaaactctgaatactag 381 ||||||||||||||||||||| Sbjct: 915 gaggcaaactctgaatactag 935 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 484 bits (244), Expect = e-133 Identities = 349/381 (91%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 573 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 632 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 633 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 687 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 688 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 747 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 748 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 807 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 808 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 867 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 868 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 927 Query: 361 gaggcaaactctgaatactag 381 ||||||||||||||||||||| Sbjct: 928 gaggcaaactctgaatactag 948 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Plus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 480 bits (242), Expect = e-132 Identities = 350/382 (91%), Gaps = 8/382 (2%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 677 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 736 Query: 62 agggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 ||| || ||| || |||||||||||||||||||||||| |||||||| ||||||| Sbjct: 737 agg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcact 790 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 ||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | | Sbjct: 791 gcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagcca 850 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 851 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtga 910 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 911 aatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 970 Query: 301 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 971 gactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 1030 Query: 360 cgaggcaaactctgaatactag 381 |||||||||||||||||||||| Sbjct: 1031 cgaggcaaactctgaatactag 1052 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Plus Query: 409 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 468 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 469 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-132 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 66 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 67 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 126 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 127 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 186 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 187 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 246 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 247 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 306 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 307 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 365 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 366 aaactctgaatactagatatg 386 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||| | |||| |||| |||||||||| | ||||| ||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagc 1065
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-132 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 66 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 67 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 126 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 127 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 186 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 187 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 246 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 247 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 306 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 307 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 365 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 366 aaactctgaatactagatatg 386 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||| | |||| |||| |||||||||| | ||||| ||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagc 4099
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 478 bits (241), Expect = e-132 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 621 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 622 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 675 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| || Sbjct: 676 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaa 735 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 795 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 361 gaggcaaactctgaatactag 381 ||||||||||||||||||||| Sbjct: 916 gaggcaaactctgaatactag 936 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagc 1067
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 476 bits (240), Expect = e-131 Identities = 351/385 (91%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 | |||| ||||||||||| |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 639 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgct 693 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 694 tatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagt 753 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 813 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 814 gccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-ac 872 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 873 cggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgag 932 Query: 364 gcaaactctgaatactagatatgac 388 ||||||| ||||||||||||||||| Sbjct: 933 gcaaactatgaatactagatatgac 957 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 413 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 472 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 473 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagc 1115
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 470 bits (237), Expect = e-129 Identities = 347/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 66 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 67 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 126 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 127 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 186 ||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgga 740 Query: 187 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 246 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 247 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 306 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 307 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 365 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 366 aaactctgaatactagatatg 386 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 101 bits (51), Expect = 2e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||| | |||| |||| |||||||||| | ||||| ||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagc 1065
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Minus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 124703 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 124644 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 124643 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 124590 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 124589 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 124530 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 124529 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 124470 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124469 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 124410 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124409 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 124350 Query: 361 gaggcaaactctgaatactag 381 ||| ||||||||||||||||| Sbjct: 124349 gagtcaaactctgaatactag 124329 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 95163 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 95222 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 95223 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 95276 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 95277 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 95336 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 95337 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 95396 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95397 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 95456 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95457 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95516 Query: 361 gaggcaaactctgaatactag 381 ||| ||||||||||||||||| Sbjct: 95517 gagtcaaactctgaatactag 95537 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Minus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagc 124198 Score = 149 bits (75), Expect = 1e-32 Identities = 105/115 (91%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagc 95668
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4725 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 4785 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 4844 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 4845 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 4904 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 4905 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 4964 Query: 361 gaggcaaactctgaatact 379 ||||||||||||||||||| Sbjct: 4965 gaggcaaactctgaatact 4983 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 417 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 476 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 477 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 5114
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 361 gaggcaaactctgaatact 379 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 417 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 476 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 477 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1081
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 361 gaggcaaactctgaatact 379 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 417 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 476 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 477 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagaca 1081
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 447/519 (86%), Gaps = 9/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 420 bits (212), Expect = e-114 Identities = 343/384 (89%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 568 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatagtggctgggtta 627 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 |||||| | | || |||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 628 agggaatttatgc-actggagccatagcgaaagcaagtcttttcagggctattgtcactg 686 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 687 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaa 746 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 747 gtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 806 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 807 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 866 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 867 actggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 926 Query: 361 gaggcaaactctgaatactagata 384 ||| ||||||||||||||| |||| Sbjct: 927 gagacaaactctgaatactggata 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 417 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 476 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 477 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1076
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 62 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 63 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 122 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 123 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 182 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 183 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 243 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 286 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 373 bits (188), Expect = e-100 Identities = 209/216 (96%) Strand = Plus / Plus Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 364 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 423 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 424 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 484 taaatgaccgctcagtgataaaggaggtgggggtgc 519 ||||||| |||||||||||||||||||| ||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc 532
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 418 bits (211), Expect = e-114 Identities = 445/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtatcc 836 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 837 ag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 364 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 421 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 422 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 481 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 418 bits (211), Expect = e-114 Identities = 344/384 (89%), Gaps = 7/384 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 558 gatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggtt 617 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||| | | || ||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 618 aaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcact 672 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 | ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 673 gtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactc 732 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 733 agtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtga 792 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 793 aatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 852 Query: 301 gact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 358 | | || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 853 ggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 912 Query: 359 tcgaggcaaactctgaatactaga 382 |||| ||||||||||||||||||| Sbjct: 913 tcgatgcaaactctgaatactaga 936 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 1063
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 418 bits (211), Expect = e-114 Identities = 344/384 (89%), Gaps = 7/384 (1%) Strand = Plus / Minus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 115104 gatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggtt 115045 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||| | | || ||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 115044 aaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcact 114990 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 | ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 114989 gtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactc 114930 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 114929 agtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtga 114870 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 114869 aatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 114810 Query: 301 gact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 358 | | || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 114809 ggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 114750 Query: 359 tcgaggcaaactctgaatactaga 382 |||| ||||||||||||||||||| Sbjct: 114749 tcgatgcaaactctgaatactaga 114726 Score = 418 bits (211), Expect = e-114 Identities = 344/384 (89%), Gaps = 7/384 (1%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 86884 gatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggtt 86943 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||| | | || ||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 86944 aaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcact 86998 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 180 | ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 86999 gtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactc 87058 Query: 181 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 240 || || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||| Sbjct: 87059 agtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtga 87118 Query: 241 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 300 ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 87119 aatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 87178 Query: 301 gact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 358 | | || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 87179 ggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 87238 Query: 359 tcgaggcaaactctgaatactaga 382 |||| ||||||||||||||||||| Sbjct: 87239 tcgatgcaaactctgaatactaga 87262 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Minus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 114599 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 87389
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 120 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 179 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 180 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 239 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 240 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 299 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 300 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 360 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 417 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 418 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 477 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 478 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 64 gg 65 || Sbjct: 602 gg 603
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 398 bits (201), Expect = e-108 Identities = 341/387 (88%), Gaps = 8/387 (2%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| Sbjct: 966 atctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcctggtta 1025 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 |||| | |||| |||||||||||||||||||| | |||||| |||||||| Sbjct: 1026 agggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcatgtcactg 1078 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| | || Sbjct: 1079 tttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaagccaa 1138 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | |||| |||||||||||| ||||||| || ||||||||||| |||||||||||||||| Sbjct: 1139 gtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaa 1198 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1199 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 1258 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 ||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1259 actaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 1318 Query: 361 gaggcaaactctgaatactagatatga 387 |||||||||||||||||||||| |||| Sbjct: 1319 gaggcaaactctgaatactagacatga 1345 Score = 145 bits (73), Expect = 2e-31 Identities = 103/113 (91%) Strand = Plus / Plus Query: 416 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 475 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 476 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1470
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 396 bits (200), Expect = e-107 Identities = 341/386 (88%), Gaps = 9/386 (2%) Strand = Plus / Plus Query: 2 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 61 |||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| Sbjct: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggtta 578 Query: 62 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 121 || ||| || ||||||||||||||||| |||| || | || || |||||||| Sbjct: 579 agagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactg 630 Query: 122 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 181 |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| | || Sbjct: 631 tttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaa 690 Query: 182 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 241 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 691 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 750 Query: 242 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 301 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 751 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 810 Query: 302 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 | ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 811 attggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 870 Query: 361 gaggcaaactctgaatactagatatg 386 ||||||||||||||||||||| |||| Sbjct: 871 gaggcaaactctgaatactaggtatg 896 Score = 165 bits (83), Expect = 2e-37 Identities = 104/111 (93%) Strand = Plus / Plus Query: 416 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 475 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 476 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagaca 1022
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 65 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 66 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 123 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 302 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 303 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 360 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 361 gaggcaaactctgaatactag 381 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtg 512 |||||||||| |||| ||||| |||| |||||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtg 1120
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 373 bits (188), Expect = e-100 Identities = 338/385 (87%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 | ||||||||||| ||||||||||| |||||||||||||| | |||| | |||||||| Sbjct: 669 tgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagt 728 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 gggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 788 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||| ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| || Sbjct: 789 gccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-ac 847 Query: 304 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 || ||||||||||||||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 848 cgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgag 907 Query: 364 gcaaactctgaatactagatatgac 388 ||| ||| ||||||||||||||||| Sbjct: 908 gcagactatgaatactagatatgac 932 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 391 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 450 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 451 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 510 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 511 t 511 | Sbjct: 1064 t 1064
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 349 bits (176), Expect = 6e-93 Identities = 176/176 (100%) Strand = Plus / Minus Query: 353 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 413 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 473 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 344
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 2e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 66 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 67 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 126 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 127 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 186 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 187 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 246 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 247 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 305 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 306 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 364 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 365 caaactctgaatactagat 383 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtg 512 |||||||||| |||| ||||| |||| ||||||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtg 1200
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 2e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 134 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 135 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 194 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 195 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 254 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 255 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 310 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 311 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 370 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 371 ctgaatactag 381 ||||||||| Sbjct: 932 aagaatactag 942 Score = 163 bits (82), Expect = 7e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtg 512 ||||||||||||||| ||||| |||||||||||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtg 1057 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 76 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 135 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 136 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 195 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 196 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 255 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 256 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 314 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 315 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 374 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 375 atactagatatga 387 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 157 bits (79), Expect = 4e-35 Identities = 106/115 (92%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 528 ||||||||||||||||||||| |||||||||||| ||| | ||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagc 1029 Score = 103 bits (52), Expect = 6e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 587
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 3e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 65 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 123 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 304 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 362 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 363 ggcaaactctgaatacta 380 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 3e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 65 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 123 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 184 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 243 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 244 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 303 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 304 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 362 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 363 ggcaaactctgaatacta 380 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 474 ctaaggcccctaaat 488 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 474 ctaaggcccctaaat 488 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 319 bits (161), Expect = 5e-84 Identities = 164/165 (99%) Strand = Plus / Plus Query: 1 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 523 Query: 61 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 524 aagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcact 583 Query: 121 gcttatggacccgaacctgggtgatctatccatgaccaggatgaa 165 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 gcttatggacccgaacctgggtgatctatccatgaccaggatgaa 628
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 12 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 71 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 72 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 130 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 131 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 190 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 191 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 250 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 251 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 309 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 310 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 369 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 370 tctgaatacta 380 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 77.8 bits (39), Expect = 3e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 487 atgaccgctcagtgataaaggaggtgg 513 || | ||| |||| ||||||||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtgg 2864
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 8e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 69 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 128 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 129 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 188 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 189 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 247 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 315 bits (159), Expect = 8e-83 Identities = 329/382 (86%), Gaps = 9/382 (2%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 65 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 122 | ||| | ||| |||| ||||||||| ||||| |||||||| | | |||||| Sbjct: 598 g---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcacttt 653 Query: 123 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 182 ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 654 ttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaag 713 Query: 183 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 242 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 714 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 773 Query: 243 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt-- 300 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 774 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgg 833 Query: 301 -gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 ||| || |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 834 cgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaat 893 Query: 360 cgaggcaaactctgaatactag 381 || ||||||| ||||||||| Sbjct: 894 cgtagcaaactaagaatactag 915 Score = 107 bits (54), Expect = 4e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtg 512 ||||||||| |||| ||||| |||| ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtg 1030
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 313 bits (158), Expect = 3e-82 Identities = 158/158 (100%) Strand = Plus / Plus Query: 371 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 431 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 491 ccgctcagtgataaaggaggtgggggtgcaaagacagc 528 |||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagc 158
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 185 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 244 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 245 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 304 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 305 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 364 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 365 caaactctgaatactagatat 385 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 112 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 171 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 172 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 231 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 232 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 291 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 292 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 348 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 349 cggtaccaaatcgaggcaaactctgaatactaga 382 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 475 taaggcccctaaatgaccgctcagtg 500 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 128 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 187 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 188 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 247 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 248 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 306 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 307 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 365 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 366 aaactctgaatactagatatgac 388 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 417 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 476 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 477 aggcccctaaatg 489 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgact 41 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 81 agccgtagcgaaagcgagtcttaatagggcgat 113 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 128 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 187 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 188 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 247 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 248 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 306 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 307 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 365 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 366 aaactctgaatactagatatgac 388 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 417 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 476 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 477 aggcccctaaatg 489 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgact 41 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 81 agccgtagcgaaagcgagtcttaatagggcgat 113 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 128 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 187 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 188 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 247 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 248 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 306 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 307 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 365 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 366 aaactctgaatactagatatgac 388 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 417 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 476 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 477 aggcccctaaatg 489 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgact 41 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 81 agccgtagcgaaagcgagtcttaatagggcgat 113 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 7e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 66 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 67 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 126 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 127 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 186 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 187 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 246 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 247 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 304 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 305 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 364 gcaaactctgaatacta 380 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 7e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 66 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 67 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 126 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 127 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 186 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 187 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 246 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 247 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 304 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 305 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 364 gcaaactctgaatacta 380 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 487 atgaccgctcagtgataaaggaggtg 512 ||| ||||| |||| |||||||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtg 192915 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 487 atgaccgctcagtgataaaggaggtg 512 ||| ||||| |||| |||||||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtg 143867
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 293 bits (148), Expect = 3e-76 Identities = 178/188 (94%), Gaps = 5/188 (2%) Strand = Plus / Minus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 63 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 64 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 69 Query: 124 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 9 Query: 184 agaggtcc 191 ||||||| Sbjct: 8 ggaggtcc 1
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 78 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 137 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 138 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 197 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 198 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 257 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 258 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 317 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 318 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 377 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 378 ct 379 || Sbjct: 2489 ct 2490 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtggg 514 |||||||||||||| | ||| |||||||||||||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtggg 2604 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 115 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 174 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 175 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 234 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 235 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 294 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 295 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 351 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 352 taccaaatcgaggcaaactctgaatactaga 382 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 163 bits (82), Expect = 7e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtg 512 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtg 1063 Score = 89.7 bits (45), Expect = 9e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 62 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 7e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 134 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 135 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 194 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 195 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 254 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 255 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 313 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 374 aatactagata 384 ||||||||||| Sbjct: 921 aatactagata 931 Score = 133 bits (67), Expect = 6e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 512 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 1042 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgact 41 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 7e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 134 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 135 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 194 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 195 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 254 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 255 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 313 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 374 aatactagata 384 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 133 bits (67), Expect = 6e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 512 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 25851 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgact 41 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 136 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 137 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 196 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 197 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 256 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 257 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 315 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 316 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 375 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 376 tac 378 ||| Sbjct: 549 tac 551 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 514 |||||| ||| ||||| ||| |||||||||||||||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtggg 666 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 14 gtgcctgttgaagaatgagccggcgactcatagg 47 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 81 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 140 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 141 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 200 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 201 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 260 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 261 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 317 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 318 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 377 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 378 ctaga 382 ||||| Sbjct: 935 ctaga 939 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtg 512 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtg 1054 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 62 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 145 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 146 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 205 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 206 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 265 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 266 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 322 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 323 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 379 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 475 taaggcccctaaat 488 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 47 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 81 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 140 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 141 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 200 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 201 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 260 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 261 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 317 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 318 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 377 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 378 ctaga 382 ||||| Sbjct: 2817 ctaga 2821 Score = 123 bits (62), Expect = 6e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtg 512 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtg 2936 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 4 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 62 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 90 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 149 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 150 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 209 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 210 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 269 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 270 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 328 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 329 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 90 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 149 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 150 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 209 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 210 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 269 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 270 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 328 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 329 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtggg 514 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtggg 189971 Score = 103 bits (52), Expect = 6e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtggg 514 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtggg 151398 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 13 cgtgcctgttgaagaatgagccggcgactcatag 46 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 13 cgtgcctgttgaagaatgagccggcgactcatag 46 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 4e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 66 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 67 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 126 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 127 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 186 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 187 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 246 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 247 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 304 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 305 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 363 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 364 gcaaactctgaatacta 380 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 99.6 bits (50), Expect = 9e-18 Identities = 77/86 (89%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 487 atgaccgctcagtgataaaggaggtg 512 ||| ||||| |||| |||||||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtg 1084
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 14 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 73 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 74 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 133 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 134 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 193 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 194 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 253 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 254 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 311 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 312 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 371 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 372 tgaatacta 380 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 7e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 66 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 67 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 126 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 127 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 186 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 187 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 246 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 247 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 304 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 305 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 364 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 365 caaactctgaatacta 380 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 476 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 477 aggcccctaaat 488 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 417 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 476 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 477 aggcccctaaat 488 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | | || |||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtggg 5558 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | | || |||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtggg 212214 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 274 bits (138), Expect = 3e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 379 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 439 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 498 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 499 tgataaaggaggtgggggtgcaaaga 524 |||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaaga 19152975
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 274 bits (138), Expect = 3e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 379 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 439 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 498 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 499 tgataaaggaggtgggggtgcaaaga 524 |||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaaga 76370
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 123 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 182 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 183 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 242 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 243 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 302 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 303 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 360 cgaggcaaactctgaatact 379 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtg 512 |||||||||||||| || ||| |||| |||||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtg 1062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 123 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 182 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 183 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 242 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 243 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 302 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 303 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 359 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 360 cgaggcaaactctgaatact 379 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtg 512 |||||||||||||| || ||| |||| |||||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtg 2800 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 4e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 66 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 67 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 126 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 127 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 186 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 187 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 246 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 247 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 292 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 95.6 bits (48), Expect = 1e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | |||| |||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtggg 3259 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 314 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 372 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 373 gaatac 378 |||||| Sbjct: 3139 gaatac 3144
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 131 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 132 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 191 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 192 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 251 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 252 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 308 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 309 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 367 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 368 actctgaatactagata 384 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 449 agagggaaacagcccggatcaccagctaaggcccctaaatg 489 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 131 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 132 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 191 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 192 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 251 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 252 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 308 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 309 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 367 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 368 actctgaatactagata 384 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 449 agagggaaacagcccggatcaccagctaaggcccctaaatg 489 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 7e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 90 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 149 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 150 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 209 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 210 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 269 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 270 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 326 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 327 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagaca 678 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 49 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 136 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 137 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 196 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 197 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 256 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 257 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 313 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 374 aatactag 381 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 136 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 137 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 196 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 197 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 256 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 257 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 313 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 374 aatactag 381 |||||||| Sbjct: 48126 aatactag 48119 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 475 taaggcccctaaatg 489 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 475 taaggcccctaaatg 489 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 7e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 76 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 135 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 136 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 195 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 196 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 255 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 256 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 309 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 310 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 369 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 370 tctgaatact 379 | ||||||| Sbjct: 924 taagaatact 933 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 411 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 470 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 471 cagctaaggcccctaaatgaccgctcagtgataaagga 508 ||||||||||||| |||| |||||||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaagga 1045 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 7e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | || |||||||||||||||||| Sbjct: 356490 atcagtactaagtgataaaggaggtggg 356517 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcga 362 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 262 bits (132), Expect = 1e-66 Identities = 323/379 (85%), Gaps = 7/379 (1%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaagg 2379 Query: 65 -gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgc 122 | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| Sbjct: 2380 cgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgt 2436 Query: 123 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 182 ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| Sbjct: 2437 ttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaag 2496 Query: 183 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 242 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2497 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2556 Query: 243 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 302 ||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2557 tgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttga 2616 Query: 303 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 361 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 2617 tgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcg 2676 Query: 362 aggcaaactctgaatacta 380 ||||||||||||||||||| Sbjct: 2677 aggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 475 taaggcccctaaat 488 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | | || |||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtggg 2137742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | | || |||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtggg 477118 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 90 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 149 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 150 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 209 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 210 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 269 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 270 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 326 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 327 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagaca 678 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 49 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 65 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 124 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 125 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 184 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 185 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 244 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 245 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 296 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 109 bits (55), Expect = 9e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 416 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 475 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 476 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagaca 2801
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | | || |||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtggg 338993 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | | || |||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtggg 132053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 81 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 138 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 259 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 315 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 316 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 374 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 375 atactagatatg 386 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 109 bits (55), Expect = 9e-21 Identities = 70/75 (93%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 475 taaggcccctaaatg 489 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 65 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 17 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 76 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 135 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 136 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 195 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 196 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 255 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 256 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 314 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 315 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 374 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 375 atacta 380 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 17 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 76 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 135 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 136 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 195 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 196 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 255 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 256 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 314 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 315 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 374 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 375 atacta 380 |||||| Sbjct: 19901 atacta 19906 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | ||| |||||||||||| ||||| Sbjct: 39408 ataattgctaagtgataaaggatgtggg 39381 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | ||| |||||||||||| ||||| Sbjct: 19992 ataattgctaagtgataaaggatgtggg 20019
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 131 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 132 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 191 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 192 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 251 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 252 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 308 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 309 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 367 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 368 actctgaatactagata 384 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 449 agagggaaacagcccggatcaccagctaaggcccctaaatg 489 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 12 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 71 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 72 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 131 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 132 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 191 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 192 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 251 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 252 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 311 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 312 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 370 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 371 ctgaatac 378 | |||||| Sbjct: 544 cagaatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 90/101 (89%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 514 |||||| ||||||||| ||| |||| ||||||||||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtggg 666
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 267 ggttctccccgaaatgcgttgaggcgcagc 296 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 127 bits (64), Expect = 4e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagaca 679 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 374 aatac 378 ||||| Sbjct: 548 aatac 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcga 39 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 267 ggttctccccgaaatgcgttgaggcgcagc 296 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 512 |||||| ||| ||||||| ||| |||||||||||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtg 665 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 374 aatac 378 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 135 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 136 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 195 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 196 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 255 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 256 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 313 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 314 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 372 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 373 gaatactagatatg 386 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 475 taaggcccctaaatg 489 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 55 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 47 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 47 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 47 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 185 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 244 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 245 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 304 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 305 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 361 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 362 aggcaaactctgaatactag 381 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 105 bits (53), Expect = 1e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 8 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 473 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 474 ctaaggcccctaaatga 490 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 114 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 169 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 135 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 136 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 195 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 196 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 255 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 256 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 313 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 314 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 372 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 373 gaatactagatatg 386 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 475 taaggcccctaaatg 489 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 55 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 76 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 135 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 136 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 195 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 196 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 255 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 256 cagagctagctggttctccccgaaatgcgttgaggcgcagc 296 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagaca 1056 Score = 111 bits (56), Expect = 2e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 309 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 368 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 369 ctctgaatactagata 384 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 6e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 133 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 134 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 193 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 194 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 253 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 254 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 310 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 311 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 369 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 370 tctgaatactagatatg 386 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 435 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 489 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 6e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 134 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 135 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 194 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 195 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 254 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 255 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 312 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 313 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 371 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 372 tgaatactagatat 385 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 64 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 449 agagggaaacagcccggatcaccagctaaggcccctaaatga 490 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 2e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 267 ggttctccccgaaatgcgttgaggcgcagcagttg 301 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagaca 681 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 374 aatac 378 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcga 39 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 2e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 136 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 137 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 196 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 197 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 256 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 257 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 314 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 315 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 374 aatac 378 ||||| Sbjct: 547 aatac 551 Score = 113 bits (57), Expect = 6e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagaca 678 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 49 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 2e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 77 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 136 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 137 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 196 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 197 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 256 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 257 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 314 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 315 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 374 aatactagat 383 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 449 agagggaaacagcccggatcaccagctaaggcccctaaatg 489 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | |||| |||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtggg 320641 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcga 362 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | | || |||||||||||||||||| Sbjct: 1775466 atcaacactaagtgataaaggaggtggg 1775439 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | | || |||||||||||||||||| Sbjct: 376603 atcaacactaagtgataaaggaggtggg 376630 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | |||| |||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtggg 3064 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcga 362 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | |||| |||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtggg 3065 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcga 362 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 79.8 bits (40), Expect = 8e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | | || |||||||| ||||||||| Sbjct: 3265 atcaacactaagtgataagggaggtggg 3292 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 267 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 323 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 324 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 415 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 474 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 475 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 520 ||||| ||| |||||| || ||||| |||||||||||| ||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgca 671 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgact 41 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | |||| |||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtggg 19816 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcga 362 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | |||| |||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtggg 1570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcga 362 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 87.7 bits (44), Expect = 3e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 487 atgaccgctcagtgataaaggaggtggg 514 || | |||| |||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtggg 316130 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 328 tttcggtgcgggctgcgcgagcggtaccaaatcga 362 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 374 aatac 378 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 374 aatac 378 ||||| Sbjct: 1049320 aatac 1049316 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1659555 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1049189 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 259 agctagctggttctccccgaaatgcgttgaggcg 292 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 374 aatac 378 ||||| Sbjct: 1186 aatac 1190 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1317 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 823 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 870
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 87 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 146 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 147 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 206 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 207 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 266 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 267 ggttctccccgaaatgcgttgaggcg 292 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 374 aatac 378 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 314 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 373 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 374 aatac 378 ||||| Sbjct: 571559 aatac 571563 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 2657231 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 414 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 473 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 474 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 526 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 571690 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2657725 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 2657678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 571196 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 571243
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 4e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 129 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 188 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 189 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 248 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 249 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 308 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 309 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 367 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 368 actctgaatacta 380 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 427 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 486 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 487 atgaccgctcagtgataaaggaggtgggggtgc 519 || | ||| |||| ||||||||||||| |||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgc 1502 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 5 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 54 |||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1010 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 1059
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 4e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 128 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 187 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 188 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 247 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 248 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 307 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 308 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 365 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 366 aaactctgaatactagatatg 386 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 6 ctgaccgcgtgcctgttgaagaatgagccggcgact 41 |||||||||| |||||||||||||| |||||||||| Sbjct: 2596 ctgaccgcgtacctgttgaagaatgggccggcgact 2631 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 413 ggccagtgagacgatgggggataagcttcat 443 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 238 bits (120), Expect = 2e-59 Identities = 256/302 (84%) Strand = Plus / Plus Query: 79 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 138 |||||| ||| ||||||||| | ||||| ||||| |||||| ||| |||||||||| Sbjct: 2324 ggagccatagtgaaagcgagcttgaatagagcgatagtcactatttacagacccgaaccc 2383 Query: 139 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 198 || ||||||| ||||| |||||||||| ||| | | | |||||| |||||||||||||| Sbjct: 2384 ggatgatctagccatggccaggatgaaacttaggtaacactaagtggaggtccgaaccga 2443 Query: 199 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 258 ||||||||||| ||||| |||||||| ||||| ||| |||||||| ||| ||||| | | Sbjct: 2444 ctgatgttgaaaaatcaacggatgagctgtggctagcggtgaaataccaatcgaattcgg 2503 Query: 259 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 318 |||||||||||||||||||||||||||||||||||||| ||||| | | ||||||| Sbjct: 2504 agctagctggttctccccgaaatgcgttgaggcgcagcggttgaaattaaacttaggggt 2563 Query: 319 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 378 |||||||||||||||||||||||||| || ||||||||||||| ||||||| |||||| Sbjct: 2564 aaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaagaatac 2623 Query: 379 ta 380 || Sbjct: 2624 ta 2625 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 416 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 475 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 476 aaggcccctaaat 488 ||||||||||||| Sbjct: 2700 aaggcccctaaat 2712 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 7 tgaccgcgtgcctgttgaagaatgagccggcgact 41 ||||| ||||||||||||||||||||||||||||| Sbjct: 2256 tgacctcgtgcctgttgaagaatgagccggcgact 2290 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,112,063 Number of Sequences: 3902068 Number of extensions: 3112063 Number of successful extensions: 60757 Number of sequences better than 10.0: 2708 Number of HSP's better than 10.0 without gapping: 2723 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 46409 Number of HSP's gapped (non-prelim): 13822 length of query: 528 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 505 effective length of database: 17,143,297,704 effective search space: 8657365340520 effective search space used: 8657365340520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
