ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2d13 |
|---|---|
| Clone Library Name | barley_pub |
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 138 bits (347), Expect = 4e-33 Identities = 68/93 (73%), Positives = 78/93 (83%), Gaps = 1/93 (1%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 LK+FVGNLPF VDSAQLA LFE AG+VEMVEV+YD++TGRSRGFGFVTM SV EV AA + Sbjct: 91 LKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQ 150 Query: 286 QFNGYTFQGRPLRVNSGPPPP-RDEFAPRTPRA 381 QFNGY GRPLRVN+GPPPP R++ R PR+ Sbjct: 151 QFNGYELDGRPLRVNAGPPPPKREDGFSRGPRS 183 Score = 73.2 bits (178), Expect = 1e-13 Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +V+VGNL + VD L LF + G V V+YDR +GRS+GFGFVT S +EV A++ Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264 Query: 289 FNGYTFQGRPLRVNSGPP-PPRDEF 360 +G GR +RV+ PPR ++ Sbjct: 265 LDGADLDGRQIRVSEAEARPPRRQY 289
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 136 bits (343), Expect = 1e-32 Identities = 67/93 (72%), Positives = 78/93 (83%), Gaps = 1/93 (1%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 LK+FVGNL F VDSAQLA LFE AG+VEMVEV+YD++TGRSRGFGFVTM + EV AA + Sbjct: 99 LKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQ 158 Query: 286 QFNGYTFQGRPLRVNSGPPPP-RDEFAPRTPRA 381 QFNGY F+GRPLRVN+GPPPP R+E R PR+ Sbjct: 159 QFNGYEFEGRPLRVNAGPPPPKREESFSRGPRS 191 Score = 77.0 bits (188), Expect = 1e-14 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +++VGNL + VD L LF + G V V+YDR +GRS+GFGFVT+ S +EV A+ Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317 Query: 289 FNGYTFQGRPLRVNSGPP-PPRDEF 360 NG GR +RV+ PPR +F Sbjct: 318 LNGADLDGRQIRVSEAEARPPRGQF 342
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 129 bits (325), Expect = 1e-30 Identities = 62/84 (73%), Positives = 71/84 (84%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 LK+FVGNLPF+ DSA LA LFE+AG+VEMVEV+YD++TGRSRGFGFVTM S EEV AA + Sbjct: 87 LKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQ 146 Query: 286 QFNGYTFQGRPLRVNSGPPPPRDE 357 QFNGY GR LRVNSGPPP + E Sbjct: 147 QFNGYELDGRALRVNSGPPPEKRE 170 Score = 78.2 bits (191), Expect = 4e-15 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 1/85 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +V+VGNL + VD L LF + G V +VVYDR +GRSRGFGFVT S EEV A+E Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 248 Query: 289 FNGYTFQGRPLRVNSGPP-PPRDEF 360 +G GR +RV+ PPR +F Sbjct: 249 LDGVDLNGRAIRVSPAEARPPRRQF 273
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 127 bits (318), Expect = 8e-30 Identities = 60/84 (71%), Positives = 72/84 (85%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 LK+FVGNLPF+VDSA LAGLFE+AG+VEMVEV+YD++TGRSRGFGFVTM + EEV AA + Sbjct: 87 LKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQ 146 Query: 286 QFNGYTFQGRPLRVNSGPPPPRDE 357 QFNGY GR +RVN+GP P + E Sbjct: 147 QFNGYEIDGRAIRVNAGPAPAKRE 170 Score = 79.3 bits (194), Expect = 2e-15 Identities = 40/84 (47%), Positives = 54/84 (64%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +V+VGNL + VD L LF + G+V +VVYDR +GRSRGFGFVT S +EV A++ Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDS 267 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEF 360 NG GR +RV++ PR +F Sbjct: 268 LNGVDLDGRSIRVSAAEERPRRQF 291
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 125 bits (315), Expect = 2e-29 Identities = 61/84 (72%), Positives = 70/84 (83%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 LK+FVGNL F+ DSA LA LFE+AG+VEMVEV+YD++TGRSRGFGFVTM S EEV AA + Sbjct: 87 LKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQ 146 Query: 286 QFNGYTFQGRPLRVNSGPPPPRDE 357 QFNGY GR LRVNSGPPP + E Sbjct: 147 QFNGYELDGRALRVNSGPPPEKRE 170 Score = 78.2 bits (191), Expect = 4e-15 Identities = 42/85 (49%), Positives = 53/85 (62%), Gaps = 1/85 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +V+VGNL + VD L LF + G V +VVYDR +GRSRGFGFVT S EEV A+E Sbjct: 195 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 254 Query: 289 FNGYTFQGRPLRVNSGPP-PPRDEF 360 +G GR +RV+ PPR +F Sbjct: 255 LDGVDLNGRAIRVSPAEARPPRRQF 279
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 124 bits (310), Expect = 7e-29 Identities = 58/84 (69%), Positives = 72/84 (85%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 LK+FVGNLPF+VDSA LAGLFE+AG+VE+VEV+YD+++GRSRGFGFVTM + EEV AA + Sbjct: 88 LKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQ 147 Query: 286 QFNGYTFQGRPLRVNSGPPPPRDE 357 QFNGY GR +RVN+GP P + E Sbjct: 148 QFNGYEIDGRAIRVNAGPAPAKRE 171 Score = 80.1 bits (196), Expect = 1e-15 Identities = 40/84 (47%), Positives = 54/84 (64%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +V+VGNL + VD L LF + G+V +VVYDR +GRSRGFGFVT S +EV A++ Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDS 268 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEF 360 NG GR +RV++ PR +F Sbjct: 269 LNGIDLDGRSIRVSAAEERPRRQF 292
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 103 bits (258), Expect = 7e-23 Identities = 52/87 (59%), Positives = 61/87 (70%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVGNLP+ VDS +LAG+F+ AG VE+ EV+Y+R T RSRGFGFVTM +VEE AVE Sbjct: 56 KLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEL 115 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPR 369 NGY GR L VN P E APR Sbjct: 116 LNGYDMDGRQLTVNKAAPRGSPERAPR 142 Score = 82.8 bits (203), Expect = 2e-16 Identities = 43/84 (51%), Positives = 53/84 (63%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +V+VGNLP+ VD+++L LF + G V VV DR TGRSRGFGFVTM S EV A+ Sbjct: 150 RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAA 209 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEF 360 +G T GR +RVN PR F Sbjct: 210 LDGQTLDGRAVRVNVAEERPRRAF 233
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 97.4 bits (241), Expect = 7e-21 Identities = 52/89 (58%), Positives = 63/89 (70%), Gaps = 1/89 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVGNLP+ +DS LA LF+QAG VE+ EV+Y+R T RSRGFGFVTM +VEE AVE Sbjct: 98 KLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVEL 157 Query: 289 FNGYTFQGRPLRVN-SGPPPPRDEFAPRT 372 ++ Y GR L VN + P R E APRT Sbjct: 158 YSQYDLNGRLLTVNKAAPRGSRPERAPRT 186 Score = 82.0 bits (201), Expect = 3e-16 Identities = 37/81 (45%), Positives = 54/81 (66%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +++VGN+P+ +D A+L +F + G V VV+DR +GRSRGFGFVTM S E++ A+ Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251 Query: 289 FNGYTFQGRPLRVNSGPPPPR 351 +G T GR +RVN+ PR Sbjct: 252 LDGQTLDGRTIRVNAAEERPR 272
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 96.7 bits (239), Expect = 1e-20 Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 1/88 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVGNL + V+S LA LFEQAG+VE+ EV+Y+R T +SRGFGFVTM SV+E AVE+ Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210 Query: 289 FNGYTFQGRPLRVN-SGPPPPRDEFAPR 369 FN Y GR L VN + P R E APR Sbjct: 211 FNRYDLNGRLLTVNKAAPRGSRPERAPR 238 Score = 83.6 bits (205), Expect = 1e-16 Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 1/82 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +V+VGNLP+ VD+ +L LF + G V VVYDR TGRSRGFGFVTM V+E+ A+ Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304 Query: 289 FNGYTFQGRPLRVN-SGPPPPR 351 +G +GR +RVN + PPR Sbjct: 305 LDGQNLEGRAIRVNVAEERPPR 326
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 94.4 bits (233), Expect = 6e-20 Identities = 52/89 (58%), Positives = 61/89 (68%), Gaps = 1/89 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVGNLP+ VDS LA LFEQAG VE+ EV+Y+R T +SRGFGFVTM +VEE AVE Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEM 196 Query: 289 FNGYTFQGRPLRVN-SGPPPPRDEFAPRT 372 +N Y GR L VN + R E PRT Sbjct: 197 YNRYDVNGRLLTVNKAARRGERPERPPRT 225 Score = 80.5 bits (197), Expect = 9e-16 Identities = 37/74 (50%), Positives = 51/74 (68%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +++VGN+P+ +D A+L LF + G V VVYDR TGRSRGFGFVTM S E++ A+ Sbjct: 231 RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIAN 290 Query: 289 FNGYTFQGRPLRVN 330 +G + GR +RVN Sbjct: 291 LDGQSLDGRTIRVN 304
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 88.6 bits (218), Expect = 3e-18 Identities = 44/81 (54%), Positives = 60/81 (74%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +++VGNLPF++ S+QL+ +F +AG+V VE+VYDR+T RSRGF FVTMGSVEE A+ Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174 Query: 289 FNGYTFQGRPLRVNSGPPPPR 351 F+G GR ++VN P PR Sbjct: 175 FDGSQVGGRTVKVNF-PEVPR 194 Score = 63.5 bits (153), Expect = 1e-10 Identities = 30/74 (40%), Positives = 44/74 (59%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K++V NL + + S L F +V+YDR +GRSRGFGF+T S E + +A++ Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDT 277 Query: 289 FNGYTFQGRPLRVN 330 N +GRPLR+N Sbjct: 278 MNEVELEGRPLRLN 291
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 72.0 bits (175), Expect = 3e-13 Identities = 32/79 (40%), Positives = 54/79 (68%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +++VGN+P +++ +L + E+ G++E+ EV+YD+ +GRSR FGFVTM +VE+ A +E+ Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144 Query: 289 FNGYTFQGRPLRVNSGPPP 345 N GR ++VN P Sbjct: 145 LNDTEIGGRKIKVNITEKP 163 Score = 57.4 bits (137), Expect = 8e-09 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 KV++GNL TV + L F + G V +V T +S GFGFV+ S EEV AA++ Sbjct: 185 KVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQA 244 Query: 289 FNGYTFQGRPLRVN 330 N +G+ +RVN Sbjct: 245 LNNSVLEGQKIRVN 258
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 70.9 bits (172), Expect = 7e-13 Identities = 34/79 (43%), Positives = 49/79 (62%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++VGNL + V A L +F + GSV+ V++ DR TGR RGFGFV + + E AA+E Sbjct: 1 MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIE 60 Query: 286 QFNGYTFQGRPLRVNSGPP 342 +G + GR L+VN P Sbjct: 61 ALDGAEWMGRDLKVNKAKP 79
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 69.7 bits (169), Expect = 2e-12 Identities = 29/74 (39%), Positives = 48/74 (64%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 ++++VG+L F + L G+FE G +E ++++ D TGRS+G+GF+T E A+E Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 286 QFNGYTFQGRPLRV 327 Q NG+ GRP++V Sbjct: 310 QLNGFELAGRPMKV 323
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 69.7 bits (169), Expect = 2e-12 Identities = 29/74 (39%), Positives = 48/74 (64%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 ++++VG+L F + L G+FE G +E ++++ D TGRS+G+GF+T E A+E Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 286 QFNGYTFQGRPLRV 327 Q NG+ GRP++V Sbjct: 310 QLNGFELAGRPMKV 323
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 67.4 bits (163), Expect = 8e-12 Identities = 29/74 (39%), Positives = 47/74 (63%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 ++++VG+L F + L G+FE G ++ + ++ D TGRS+G+GF+T E A+E Sbjct: 263 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 322 Query: 286 QFNGYTFQGRPLRV 327 Q NG+ GRP+RV Sbjct: 323 QLNGFELAGRPMRV 336
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 66.6 bits (161), Expect = 1e-11 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 1/91 (1%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGN+P+ QL +F + GSV +VYDR TG+ +G+GF E +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 292 NGYTFQGRPLRV-NSGPPPPRDEFAPRTPRA 381 NG F GR LRV N+ ++E P A Sbjct: 78 NGREFSGRALRVDNAASEKNKEELKSLGPAA 108
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 66.6 bits (161), Expect = 1e-11 Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 1/91 (1%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGN+P+ QL +F + GSV +VYDR TG+ +G+GF E +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 292 NGYTFQGRPLRV-NSGPPPPRDEFAPRTPRA 381 NG F GR LRV N+ ++E P A Sbjct: 78 NGREFSGRALRVDNAASEKNKEELKSLGPAA 108
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 64.3 bits (155), Expect = 7e-11 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGN+P+ QL +F + G V +VYDR TG+ +G+GF E +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 292 NGYTFQGRPLRVNS 333 NG F GR LRV++ Sbjct: 78 NGREFSGRALRVDN 91
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 64.3 bits (155), Expect = 7e-11 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGN+P+ QL +F + G V +VYDR TG+ +G+GF E +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 292 NGYTFQGRPLRVNS 333 NG F GR LRV++ Sbjct: 78 NGREFSGRALRVDN 91
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 64.3 bits (155), Expect = 7e-11 Identities = 37/91 (40%), Positives = 46/91 (50%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + D A L F G V +V+ DR TGRSRGFGFV AA+ + Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRTPRA 381 +G GR +RVN P D P PRA Sbjct: 96 MDGKELNGRHIRVN----PANDR--PSAPRA 120
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 64.3 bits (155), Expect = 7e-11 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGN+P+ QL +F + G V +VYDR TG+ +G+GF E +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 292 NGYTFQGRPLRVNS 333 NG F GR LRV++ Sbjct: 78 NGREFSGRALRVDN 91
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 64.3 bits (155), Expect = 7e-11 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGN+P+ QL +F + G V +VYDR TG+ +G+GF E +A+ Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 292 NGYTFQGRPLRVNS 333 NG F GR LRV++ Sbjct: 78 NGREFSGRALRVDN 91
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 62.0 bits (149), Expect = 3e-10 Identities = 32/74 (43%), Positives = 41/74 (55%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L F D L F G + V VV DR T RSRGFGF+T + E + A+ Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66 Query: 289 FNGYTFQGRPLRVN 330 NG + GR +RV+ Sbjct: 67 MNGESLDGRQIRVD 80
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 61.6 bits (148), Expect = 4e-10 Identities = 31/74 (41%), Positives = 44/74 (59%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L F + L +F + G + V VV DR T RSRGFGFVT ++++ A+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 289 FNGYTFQGRPLRVN 330 NG + GR +RV+ Sbjct: 67 MNGKSVDGRQIRVD 80
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 61.6 bits (148), Expect = 4e-10 Identities = 31/74 (41%), Positives = 44/74 (59%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L F + L +F + G + V VV DR T RSRGFGFVT ++++ A+ Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 289 FNGYTFQGRPLRVN 330 NG + GR +RV+ Sbjct: 67 MNGKSVDGRQIRVD 80
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 61.2 bits (147), Expect = 6e-10 Identities = 31/74 (41%), Positives = 44/74 (59%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L F + L +F + G + V VV DR T RSRGFGFVT ++++ A+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 289 FNGYTFQGRPLRVN 330 NG + GR +RV+ Sbjct: 67 MNGKSVDGRQIRVD 80
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 61.2 bits (147), Expect = 6e-10 Identities = 31/74 (41%), Positives = 44/74 (59%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L F + L +F + G + V VV DR T RSRGFGFVT ++++ A+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 289 FNGYTFQGRPLRVN 330 NG + GR +RV+ Sbjct: 67 MNGKSVDGRQIRVD 80
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 61.2 bits (147), Expect = 6e-10 Identities = 31/74 (41%), Positives = 44/74 (59%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L F + L +F + G + V VV DR T RSRGFGFVT ++++ A+ Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66 Query: 289 FNGYTFQGRPLRVN 330 NG + GR +RV+ Sbjct: 67 MNGKSVDGRQIRVD 80
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 61.2 bits (147), Expect = 6e-10 Identities = 32/74 (43%), Positives = 41/74 (55%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L F D L F G + V VV DR T RSRGFGF+T + E + A+ Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66 Query: 289 FNGYTFQGRPLRVN 330 NG + GR +RV+ Sbjct: 67 MNGESLDGRQIRVD 80
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 60.5 bits (145), Expect = 9e-10 Identities = 30/74 (40%), Positives = 42/74 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 + FVG L + A+L F Q G V +++ DR TGRSRGFGFVT + + A+++ Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66 Query: 289 FNGYTFQGRPLRVN 330 NG GR + VN Sbjct: 67 MNGKELDGRTITVN 80
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 60.1 bits (144), Expect = 1e-09 Identities = 31/74 (41%), Positives = 40/74 (54%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 + FVG L + D L F Q G V +++ DR TGRSRGFGFVT + + A+E Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 289 FNGYTFQGRPLRVN 330 NG GR + VN Sbjct: 69 MNGQDLDGRSITVN 82
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 59.7 bits (143), Expect = 2e-09 Identities = 30/74 (40%), Positives = 40/74 (54%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 + FVG L + D L F Q G + +++ DR TGRSRGFGFVT + + A+E Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68 Query: 289 FNGYTFQGRPLRVN 330 NG GR + VN Sbjct: 69 MNGQDLDGRSITVN 82
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 59.3 bits (142), Expect = 2e-09 Identities = 31/74 (41%), Positives = 40/74 (54%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 + FVG L + D L F Q G V +++ DR TGRSRGFGFVT + + A+E Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68 Query: 289 FNGYTFQGRPLRVN 330 NG GR + VN Sbjct: 69 MNGQDLDGRSITVN 82
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 59.3 bits (142), Expect = 2e-09 Identities = 31/74 (41%), Positives = 41/74 (55%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 + FVG L + ++ L F G V +V+ DR TGRSRGFGFVT S + + A+E Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68 Query: 289 FNGYTFQGRPLRVN 330 NG GR + VN Sbjct: 69 MNGKELDGRNITVN 82
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 58.9 bits (141), Expect = 3e-09 Identities = 30/74 (40%), Positives = 39/74 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 + FVG L + + L F G + +V+ DR TGRSRGFGFVT S + A+E Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68 Query: 289 FNGYTFQGRPLRVN 330 NG GR + VN Sbjct: 69 MNGKELDGRNITVN 82
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 58.5 bits (140), Expect = 4e-09 Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGN+P+ V Q+ +F Q G V+ ++V D TG +G+GF E A AV + Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKL 68 Query: 292 NGYTFQGRPLRVNSGPPPPRD----EFAPRTPRAM 384 N R +RV PR E+ RT R M Sbjct: 69 NNSELGPRKIRVEFPSNDPRRNQSYEYTERTDRYM 103
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 58.5 bits (140), Expect = 4e-09 Identities = 29/74 (39%), Positives = 40/74 (54%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 + FVG L + + L F Q G + +++ DR TGRSRGFGFVT + + A+E Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66 Query: 289 FNGYTFQGRPLRVN 330 NG GR + VN Sbjct: 67 MNGQELDGRNITVN 80
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 58.2 bits (139), Expect = 5e-09 Identities = 31/74 (41%), Positives = 43/74 (58%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L F + L F + G + V VV DR T RSRGFGFVT +V++ A+ Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65 Query: 289 FNGYTFQGRPLRVN 330 NG + GR +RV+ Sbjct: 66 MNGKSVDGRQIRVD 79
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 57.4 bits (137), Expect = 8e-09 Identities = 29/74 (39%), Positives = 41/74 (55%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 + FVG L + + L F Q G V +++ DR +GRSRGFGFVT + + A+E+ Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66 Query: 289 FNGYTFQGRPLRVN 330 NG GR + VN Sbjct: 67 MNGKELDGRVITVN 80
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 56.6 bits (135), Expect = 1e-08 Identities = 25/73 (34%), Positives = 41/73 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVG LP+ + + +F Q G + + +V D+ TG+S+GF F+ AV+ F Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97 Query: 292 NGYTFQGRPLRVN 330 NG +GR +RV+ Sbjct: 98 NGIKIKGRTIRVD 110
>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)| Length = 519 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/73 (38%), Positives = 44/73 (60%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL + A L LF G+V+ V++V D T + +G+GFV+M + +E A A+ Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499 Query: 292 NGYTFQGRPLRVN 330 NGYT R L+V+ Sbjct: 500 NGYTMGNRVLQVS 512 Score = 40.0 bits (92), Expect = 0.001 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 13/90 (14%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMT-------------GRSRGFGFVTM 252 + V LP T+ ++ LF G +E V+++ D+ G+S G+GFV Sbjct: 187 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 246 Query: 253 GSVEEVAAAVEQFNGYTFQGRPLRVNSGPP 342 ++ AV NG Q + ++V+ P Sbjct: 247 VRPQDAEQAVNVLNGLRLQNKTIKVSFARP 276 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTG-RSRGFGFVTMGSVEEVAAAVEQ 288 ++V LP T+ +L +F G++ ++ + +++G GF+ EE A+ Sbjct: 286 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 345 Query: 289 FNGYT 303 NG T Sbjct: 346 LNGTT 350
>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)| Length = 483 Score = 56.2 bits (134), Expect = 2e-08 Identities = 28/73 (38%), Positives = 44/73 (60%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL + A L LF G+V+ V++V D T + +G+GFV+M + +E A A+ Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463 Query: 292 NGYTFQGRPLRVN 330 NGYT R L+V+ Sbjct: 464 NGYTMGNRVLQVS 476 Score = 40.0 bits (92), Expect = 0.001 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 13/90 (14%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMT-------------GRSRGFGFVTM 252 + V LP T+ ++ LF G +E V+++ D+ G+S G+GFV Sbjct: 151 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 210 Query: 253 GSVEEVAAAVEQFNGYTFQGRPLRVNSGPP 342 ++ AV NG Q + ++V+ P Sbjct: 211 VRPQDAEQAVNVLNGLRLQNKTIKVSFARP 240 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTG-RSRGFGFVTMGSVEEVAAAVEQ 288 ++V LP T+ +L +F G++ ++ + +++G GF+ EE A+ Sbjct: 250 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 309 Query: 289 FNGYT 303 NG T Sbjct: 310 LNGTT 314
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 55.8 bits (133), Expect = 2e-08 Identities = 28/73 (38%), Positives = 40/73 (54%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVG+L VD L F+ S V++D TG SRG+GFV+ S ++ A++ Sbjct: 163 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 222 Query: 292 NGYTFQGRPLRVN 330 G GRPLR+N Sbjct: 223 QGQDLNGRPLRIN 235 Score = 33.9 bits (76), Expect = 0.094 Identities = 23/85 (27%), Positives = 35/85 (41%) Frame = +1 Query: 115 FVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFN 294 ++GN+P A L LF+ G + D +G F+ + E+ A + Sbjct: 343 YIGNIPHFATEADLIPLFQNFG------FILDFKHYPEKGCCFIKYDTHEQAAVCIVALA 396 Query: 295 GYTFQGRPLRVNSGPPPPRDEFAPR 369 + FQGR LR G R F P+ Sbjct: 397 NFPFQGRNLRTGWG--KERSNFMPQ 419
>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding| protein RBP1) Length = 672 Score = 55.5 bits (132), Expect = 3e-08 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFE-QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +FVG+L T A L LF+ + SV+ V V+ D +TG SR FGFV G +E A+ + Sbjct: 194 LFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIE 253 Query: 289 FNGYTFQGRPLRVNSGPP 342 +G FQGR LRV P Sbjct: 254 MSGKWFQGRALRVAYATP 271 Score = 32.0 bits (71), Expect = 0.36 Identities = 21/77 (27%), Positives = 33/77 (42%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVG L QL LF+ G + V + + GFV + A+++ Sbjct: 362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRIP------NGKNCGFVKFEKRIDAEASIQGL 415 Query: 292 NGYTFQGRPLRVNSGPP 342 G+ G P+R++ G P Sbjct: 416 QGFIVGGSPIRLSWGRP 432
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 55.5 bits (132), Expect = 3e-08 Identities = 27/72 (37%), Positives = 43/72 (59%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L F V +QL F Q G+V V V D +T RS G+G+V + ++ A A+++ Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97 Query: 292 NGYTFQGRPLRV 327 N G+P+RV Sbjct: 98 NYIPLYGKPIRV 109 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/68 (33%), Positives = 35/68 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V+V NL + L F + G + V+ D G+S+GFGFV + ++ A AVE Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-EGKSKGFGFVNFENADDAARAVESL 275 Query: 292 NGYTFQGR 315 NG+ F + Sbjct: 276 NGHKFDDK 283 Score = 41.6 bits (96), Expect = 5e-04 Identities = 25/82 (30%), Positives = 41/82 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL ++D L F G++ +V D +G+S+G+GFV + E A+E+ Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKL 184 Query: 292 NGYTFQGRPLRVNSGPPPPRDE 357 NG + + V GP R E Sbjct: 185 NGMLLNDKQVYV--GPFLRRQE 204 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V NL ++ +L +F G+V +V+ D G S+G GFV + EE A+ Q Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEATEAMSQL 378 Query: 292 NGYTFQGRPLRV 327 +G + +PL V Sbjct: 379 SGKMIESKPLYV 390
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 55.5 bits (132), Expect = 3e-08 Identities = 31/74 (41%), Positives = 38/74 (51%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG LP+ A L FE G +E V+ DR TG+SRG+GFVTM A + Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 289 FNGYTFQGRPLRVN 330 N GR VN Sbjct: 72 PNP-IIDGRKANVN 84
>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 430 Score = 55.5 bits (132), Expect = 3e-08 Identities = 29/72 (40%), Positives = 42/72 (58%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGNLP+ V+ + + F GS+ V +V D+MTG +GFG+V + + V A+ + Sbjct: 289 VFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLAL-KL 347 Query: 292 NGYTFQGRPLRV 327 N GR LRV Sbjct: 348 NNSELMGRKLRV 359 Score = 30.8 bits (68), Expect = 0.80 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMV 195 VFVGNLP T + +L F++ G +E V Sbjct: 187 VFVGNLPVTCNKKKLKSFFKEYGQIESV 214
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 55.1 bits (131), Expect = 4e-08 Identities = 27/77 (35%), Positives = 40/77 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGNL F L+ F G ++ + + D +GR +GFG+VT ++ VE Sbjct: 368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-M 426 Query: 292 NGYTFQGRPLRVNSGPP 342 NG+ GRP R++ P Sbjct: 427 NGHFIAGRPCRLDFSTP 443 Score = 49.7 bits (117), Expect = 2e-06 Identities = 27/79 (34%), Positives = 40/79 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVG L + VD L FE+ G++ V+ D +GRS+G+G+V + E AAV Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAAN 324 Query: 292 NGYTFQGRPLRVNSGPPPP 348 GR + ++ P P Sbjct: 325 GTKEIDGRMVNLDLSNPRP 343
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 55.1 bits (131), Expect = 4e-08 Identities = 24/73 (32%), Positives = 41/73 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+G LP+ + + +F Q G + + +V D+ TG+S+GF F+ AV+ F Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNF 97 Query: 292 NGYTFQGRPLRVN 330 NG +GR +RV+ Sbjct: 98 NGIKIKGRTIRVD 110
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 55.1 bits (131), Expect = 4e-08 Identities = 31/74 (41%), Positives = 38/74 (51%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG LP+ A L FE G +E V+ DR TG+SRG+GFVTM A + Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 289 FNGYTFQGRPLRVN 330 N GR VN Sbjct: 93 PNP-IIDGRKANVN 105
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 54.7 bits (130), Expect = 5e-08 Identities = 30/73 (41%), Positives = 42/73 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL D + L LF G+V V+V+ D T + +GFGFVTM + +E A A+ Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 292 NGYTFQGRPLRVN 330 NGY R L+V+ Sbjct: 346 NGYRLGERVLQVS 358 Score = 46.6 bits (109), Expect = 1e-05 Identities = 22/77 (28%), Positives = 38/77 (49%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + + LF G +E ++V D++TG+S G+GFV + A+ Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 101 NGLKLQTKTIKVSYARP 117 Score = 41.6 bits (96), Expect = 5e-04 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP T+ ++ LF Q G + ++ D+ TG SRG GF+ E A++ Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 292 NG 297 NG Sbjct: 187 NG 188
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 54.7 bits (130), Expect = 5e-08 Identities = 30/73 (41%), Positives = 42/73 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL D + L LF G+V V+V+ D T + +GFGFVTM + +E A A+ Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 292 NGYTFQGRPLRVN 330 NGY R L+V+ Sbjct: 346 NGYRLGERVLQVS 358 Score = 46.6 bits (109), Expect = 1e-05 Identities = 22/77 (28%), Positives = 38/77 (49%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + + LF G +E ++V D++TG+S G+GFV + A+ Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 101 NGLKLQTKTIKVSYARP 117 Score = 42.4 bits (98), Expect = 3e-04 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP T+ ++ LF Q G + ++ D++TG SRG GF+ E A++ Sbjct: 127 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 292 NG 297 NG Sbjct: 187 NG 188
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 54.7 bits (130), Expect = 5e-08 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 12/99 (12%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + L +F + G + + ++ DR T +SRGF FVT+ S + A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68 Query: 289 FNGYTFQGRPLRVNSG------------PPPPRDEFAPR 369 NG + G+ ++V PPPPR PR Sbjct: 69 MNGKSLDGKAIKVEQATKPFFESGRRGPPPPPRSRGPPR 107
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 54.3 bits (129), Expect = 7e-08 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 12/99 (12%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + L +F + G + V ++ DR T +SRGF FVT S + A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68 Query: 289 FNGYTFQGRPLRVNSG------------PPPPRDEFAPR 369 NG + G+ ++V PPPPR PR Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPR 107
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 54.3 bits (129), Expect = 7e-08 Identities = 30/73 (41%), Positives = 42/73 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL D + L LF G+V V+V+ D T + +GFGFVTM + +E A A+ Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 292 NGYTFQGRPLRVN 330 NGY R L+V+ Sbjct: 364 NGYRLGDRVLQVS 376 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/77 (28%), Positives = 39/77 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + + LF G +E ++V D++TG+S G+GFV ++ A+ Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 113 NGLRLQTKTIKVSYARP 129 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP T+ +L LF Q G + ++ D++TG SRG GF+ E A++ Sbjct: 139 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 198 Query: 292 NG 297 NG Sbjct: 199 NG 200
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 54.3 bits (129), Expect = 7e-08 Identities = 30/73 (41%), Positives = 42/73 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL D + L LF G+V V+V+ D T + +GFGFVTM + +E A A+ Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 292 NGYTFQGRPLRVN 330 NGY R L+V+ Sbjct: 359 NGYRLGDRVLQVS 371 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/77 (28%), Positives = 39/77 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + + LF G +E ++V D++TG+S G+GFV ++ A+ Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 108 NGLRLQTKTIKVSYARP 124 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP T+ +L LF Q G + ++ D++TG SRG GF+ E A++ Sbjct: 134 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 193 Query: 292 NG 297 NG Sbjct: 194 NG 195
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 54.3 bits (129), Expect = 7e-08 Identities = 26/79 (32%), Positives = 40/79 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVG L +++D L FE G V V+Y+R T RSRG+G+V + A+++ Sbjct: 170 IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEM 229 Query: 292 NGYTFQGRPLRVNSGPPPP 348 G GRP+ + P Sbjct: 230 QGKEIDGRPINCDMSTSKP 248 Score = 50.1 bits (118), Expect = 1e-06 Identities = 24/82 (29%), Positives = 42/82 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+GNL F D + LF + G V V + T + +GFG+V ++E+ A++ Sbjct: 269 LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDAL 328 Query: 292 NGYTFQGRPLRVNSGPPPPRDE 357 G RP+R++ P P ++ Sbjct: 329 QGEYIDNRPVRLDFSSPRPNND 350
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 54.3 bits (129), Expect = 7e-08 Identities = 30/73 (41%), Positives = 42/73 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL D + L LF G+V V+V+ D T + +GFGFVTM + +E A A+ Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 292 NGYTFQGRPLRVN 330 NGY R L+V+ Sbjct: 352 NGYRLGDRVLQVS 364 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/77 (28%), Positives = 39/77 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + + LF G +E ++V D++TG+S G+GFV ++ A+ Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 101 NGLRLQTKTIKVSYARP 117 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP T+ +L LF Q G + ++ D++TG SRG GF+ E A++ Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 186 Query: 292 NG 297 NG Sbjct: 187 NG 188
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 53.9 bits (128), Expect = 9e-08 Identities = 30/72 (41%), Positives = 41/72 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGNLP+ VD + L F GS+ V +V + +TG RGFG+V + + V A+ + Sbjct: 287 VFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KL 345 Query: 292 NGYTFQGRPLRV 327 N GR LRV Sbjct: 346 NNSELMGRKLRV 357 Score = 31.2 bits (69), Expect = 0.61 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMV 195 VFVGNLP T + +L F++ G VE V Sbjct: 185 VFVGNLPVTCNKKKLKSFFKEYGQVESV 212
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 53.5 bits (127), Expect = 1e-07 Identities = 29/73 (39%), Positives = 42/73 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL D + L +F G+V V+V+ D T + +GFGFVTM + +E A A+ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 292 NGYTFQGRPLRVN 330 NGY R L+V+ Sbjct: 338 NGYRLGDRVLQVS 350 Score = 46.6 bits (109), Expect = 1e-05 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = +1 Query: 127 LPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTF 306 LP + +L LF G +E ++V D++TG+S G+GFV ++ A+ NG Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL 105 Query: 307 QGRPLRVNSGPP 342 Q + ++V+ P Sbjct: 106 QTKTIKVSYARP 117 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP T+ +L LF Q G + ++ D++TG SRG GF+ E A++ Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 292 NG 297 NG Sbjct: 187 NG 188
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 53.5 bits (127), Expect = 1e-07 Identities = 29/73 (39%), Positives = 42/73 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL D + L +F G+V V+V+ D T + +GFGFVTM + +E A A+ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 292 NGYTFQGRPLRVN 330 NGY R L+V+ Sbjct: 338 NGYRLGDRVLQVS 350 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/77 (29%), Positives = 40/77 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + +L LF G +E ++V D++TG+S G+GFV ++ A+ Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 101 NGLRLQTKTIKVSYARP 117 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP T+ +L LF Q G + ++ D++TG SRG GF+ E A++ Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 292 NG 297 NG Sbjct: 187 NG 188
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 53.5 bits (127), Expect = 1e-07 Identities = 29/73 (39%), Positives = 42/73 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL D + L +F G+V V+V+ D T + +GFGFVTM + +E A A+ Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 292 NGYTFQGRPLRVN 330 NGY R L+V+ Sbjct: 338 NGYRLGDRVLQVS 350 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/77 (29%), Positives = 40/77 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + +L LF G +E ++V D++TG+S G+GFV ++ A+ Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 101 NGLRLQTKTIKVSYARP 117 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP T+ +L LF Q G + ++ D++TG SRG GF+ E A++ Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 292 NG 297 NG Sbjct: 187 NG 188
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 53.5 bits (127), Expect = 1e-07 Identities = 29/73 (39%), Positives = 42/73 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL D + L +F G+V V+V+ D T + +GFGFVTM + +E A A+ Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338 Query: 292 NGYTFQGRPLRVN 330 NGY R L+V+ Sbjct: 339 NGYRLGDRVLQVS 351 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/77 (29%), Positives = 40/77 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + +L LF G +E ++V D++TG+S G+GFV ++ A+ Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 101 NGLRLQTKTIKVSYARP 117 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP T+ +L LF Q G + ++ D++TG SRG GF+ E A++ Sbjct: 127 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGL 186 Query: 292 NG 297 NG Sbjct: 187 NG 188
>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2| (G-strand-binding protein 2) (RAP1 localization factor 6) Length = 427 Score = 52.8 bits (125), Expect = 2e-07 Identities = 28/76 (36%), Positives = 44/76 (57%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +VF+ NLP++++ L +F++ G V +V D G SRGFG V + +E+ A++ Sbjct: 220 EVFIINLPYSMNWQSLKDMFKECGHVLRADVELD-FNGFSRGFGSVIYPTEDEMIRAIDT 278 Query: 289 FNGYTFQGRPLRVNSG 336 FNG +GR L V G Sbjct: 279 FNGMEVEGRVLEVREG 294 Score = 46.6 bits (109), Expect = 1e-05 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 2/91 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL F L LF G V +++ + G RG G V E V A+ +F Sbjct: 124 IFVRNLTFDCTPEDLKELFGTVGEVVEADIITSK--GHHRGMGTVEFTKNESVQDAISKF 181 Query: 292 NGYTFQGRPLRVNSGPPPPR--DEFAPRTPR 378 +G F R L V PPP EF+ + R Sbjct: 182 DGALFMDRKLMVRQDNPPPEAAKEFSKKATR 212
>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1| Length = 858 Score = 52.8 bits (125), Expect = 2e-07 Identities = 25/73 (34%), Positives = 38/73 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+ NLPF ++ FE G+V+ V + D+ T S+G FV+ AA Sbjct: 315 RLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYRA 374 Query: 289 FNGYTFQGRPLRV 327 +G TFQGR L + Sbjct: 375 KDGSTFQGRLLHL 387 Score = 39.7 bits (91), Expect = 0.002 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ + NLPF + LF G ++ V + + +RGFGFV +V E +A+E Sbjct: 720 KILIKNLPFEATKRDIRDLFSSQGQLKSVRLP-KKFDNTTRGFGFVEYSTVREAQSAMEA 778 Query: 289 FNGYTFQGRPL 321 GR L Sbjct: 779 LKHTHLLGRHL 789
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 52.4 bits (124), Expect = 3e-07 Identities = 28/73 (38%), Positives = 41/73 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL D L +F G+V V+V+ D T + +GFGFVTM + EE A A+ Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 292 NGYTFQGRPLRVN 330 NGY + L+V+ Sbjct: 306 NGYRLGDKILQVS 318 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/77 (28%), Positives = 39/77 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + +L LF G VE +++ D++ G S G+GFV + ++ A+ Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 82 NGLRLQSKTIKVSYARP 98 Score = 40.8 bits (94), Expect = 8e-04 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 2/84 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ LP T+ + +F + G + V+ D+ TG SRG F+ E A+ F Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167 Query: 292 NGYTFQG--RPLRVNSGPPPPRDE 357 NG+ G P+ V P +++ Sbjct: 168 NGHKPPGSSEPITVKFAANPNQNK 191
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 52.4 bits (124), Expect = 3e-07 Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 12/99 (12%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + L +F + G + + ++ DR T +SRGF FVT S + Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68 Query: 289 FNGYTFQGRPLRVNSG------------PPPPRDEFAPR 369 NG + G+ ++V PPPPR PR Sbjct: 69 MNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPR 107
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 52.0 bits (123), Expect = 3e-07 Identities = 28/72 (38%), Positives = 41/72 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGNLP+ ++ + L F GS+ V +V + +TG RGFG+V + + V A+ + Sbjct: 293 VFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KL 351 Query: 292 NGYTFQGRPLRV 327 N GR LRV Sbjct: 352 NNSELMGRKLRV 363 Score = 31.2 bits (69), Expect = 0.61 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMV 195 VFVGNLP T + +L F++ G VE V Sbjct: 191 VFVGNLPVTCNKKKLKSFFKEYGQVESV 218
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 52.0 bits (123), Expect = 3e-07 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVG+L + + + F G + VV D TG+S+G+GFV+ + + A++Q Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 292 NGYTFQGRPLRVN---SGPPPPRDEFAPRT 372 G GR +R N PP P+ + T Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNT 197 Score = 36.2 bits (82), Expect = 0.019 Identities = 23/78 (29%), Positives = 36/78 (46%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VGNL V A + LF Q G + +++ D T + + FV AAA+ Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66 Query: 292 NGYTFQGRPLRVNSGPPP 345 NG G+ ++VN P Sbjct: 67 NGRKIMGKEVKVNWATTP 84
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 52.0 bits (123), Expect = 3e-07 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVG+L + + + F G + VV D TG+S+G+GFV+ + + A++Q Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 292 NGYTFQGRPLRVN---SGPPPPRDEFAPRT 372 G GR +R N PP P+ + T Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNT 197 Score = 36.2 bits (82), Expect = 0.019 Identities = 23/78 (29%), Positives = 36/78 (46%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VGNL V A + LF Q G + +++ D T + + FV AAA+ Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66 Query: 292 NGYTFQGRPLRVNSGPPP 345 NG G+ ++VN P Sbjct: 67 NGRKIMGKEVKVNWATTP 84
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 51.6 bits (122), Expect = 4e-07 Identities = 28/73 (38%), Positives = 41/73 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL D L +F G+V V+V+ D T + +GFGFVTM + EE A A+ Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305 Query: 292 NGYTFQGRPLRVN 330 NGY + L+V+ Sbjct: 306 NGYRLGDKILQVS 318 Score = 48.9 bits (115), Expect = 3e-06 Identities = 22/77 (28%), Positives = 39/77 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + +L LF G VE +++ D++ G S G+GFV + ++ A+ Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81 Query: 292 NGYTFQGRPLRVNSGPP 342 NG Q + ++V+ P Sbjct: 82 NGLRLQSKTIKVSYARP 98
>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 728 Score = 51.6 bits (122), Expect = 4e-07 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV NL + V +L +F AG V +++ D+ G+SRG G VT E A+ F Sbjct: 204 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGIVTFEQSIEAVQAISMF 262 Query: 292 NGYTFQGRPLRV--NSGPPPPRDEFAPRTPRAM 384 NG RP+ V + P D F P P+ + Sbjct: 263 NGQLLFDRPMHVKMDERALPKGDFFPPERPQQL 295 Score = 45.8 bits (107), Expect = 2e-05 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + F+ N+PF V L L E+ G V VE++ D G+SRG V E + A E Sbjct: 70 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 128 Query: 286 QFNGYTFQGRPLRVNSGP 339 N ++ GRPL+V P Sbjct: 129 VLNKHSLSGRPLKVKEDP 146 Score = 37.7 bits (86), Expect = 0.007 Identities = 23/73 (31%), Positives = 32/73 (43%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FV NLPF L F + G V ++ + G+S+G G V S E A Sbjct: 652 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 709 Query: 289 FNGYTFQGRPLRV 327 NG GR + V Sbjct: 710 MNGMKLSGREIDV 722
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 51.2 bits (121), Expect = 6e-07 Identities = 23/71 (32%), Positives = 40/71 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++G++P+ Q+ L G V +++++D TGRS+G+ F+ +E A+AV Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79 Query: 292 NGYTFQGRPLR 324 NGY R L+ Sbjct: 80 NGYQLGSRFLK 90
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 51.2 bits (121), Expect = 6e-07 Identities = 28/58 (48%), Positives = 35/58 (60%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FEQ G++ V+ D T RSRGFGFVT +VEEV AA+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 71 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FEQ G +E++E++ DR +G+ RGF FVT + V V Q Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 164
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 51.2 bits (121), Expect = 6e-07 Identities = 28/58 (48%), Positives = 35/58 (60%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FEQ G++ V+ D T RSRGFGFVT +VEEV AA+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 71 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FEQ G +E++E++ DR +G+ RGF FVT + V V Q Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 164
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 51.2 bits (121), Expect = 6e-07 Identities = 24/72 (33%), Positives = 41/72 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV + + +L +F + G+V V ++ + +T SRGFGF++ +VEE +A++ Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162 Query: 292 NGYTFQGRPLRV 327 N F GR L V Sbjct: 163 NSQEFYGRVLNV 174
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 51.2 bits (121), Expect = 6e-07 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQA-GSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +FVG+L T + + L F S +++ D +TG SR +GFV S +E A+ Sbjct: 184 IFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMH 243 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFA 363 GY QGRPLR++ P R A Sbjct: 244 MQGYLCQGRPLRISVASPKSRASIA 268
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 51.2 bits (121), Expect = 6e-07 Identities = 28/58 (48%), Positives = 35/58 (60%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FEQ G++ V+ D T RSRGFGFVT +VEEV AA+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 71 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FEQ G +E++E++ DR +G+ RGF FVT + V V Q Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 164
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 51.2 bits (121), Expect = 6e-07 Identities = 28/58 (48%), Positives = 35/58 (60%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FEQ G++ V+ D T RSRGFGFVT +VEEV AA+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM 71 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FEQ G +E++E++ DR +G+ RGF FVT + V V Q Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 164
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 50.8 bits (120), Expect = 7e-07 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 19/97 (19%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE-- 285 VFVG + +D ++ G F + GSV+ V+++ DR TG S+G+GFV+ + +V VE Sbjct: 42 VFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVESQ 100 Query: 286 -QFNG----------------YTFQGRPLRVNSGPPP 345 F+G Y Q RPL N PPP Sbjct: 101 INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPP 137
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 50.8 bits (120), Expect = 7e-07 Identities = 29/74 (39%), Positives = 43/74 (58%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 L +FVG LP + S QL LF Q G V+ VV ++ + RGFG+VT +E+V A++ Sbjct: 3 LTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62 Query: 286 QFNGYTFQGRPLRV 327 + TF+G + V Sbjct: 63 EIT--TFEGCKINV 74 Score = 35.8 bits (81), Expect = 0.025 Identities = 22/74 (29%), Positives = 37/74 (50%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++ + NL F L +F Q G+V V + + G+ RGFGFV ++ E A++ Sbjct: 114 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPR-KPDGKMRGFGFVQFKNLLEAGKALKG 172 Query: 289 FNGYTFQGRPLRVN 330 N +GR + V+ Sbjct: 173 MNMKEIKGRTVAVD 186 Score = 33.9 bits (76), Expect = 0.094 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 6/79 (7%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEE------VA 273 VF+ NL F + +L L +Q G ++ V +V T S+G F + E A Sbjct: 336 VFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLLAA 395 Query: 274 AAVEQFNGYTFQGRPLRVN 330 + + G GR L+V+ Sbjct: 396 SPENEAGGLKLDGRQLKVD 414
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 50.8 bits (120), Expect = 7e-07 Identities = 25/59 (42%), Positives = 36/59 (61%) Frame = +1 Query: 154 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 330 L +F + G + V VVYD+ TGRSRGF FV +++ A+E+ NG GR +RV+ Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 191
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 50.8 bits (120), Expect = 7e-07 Identities = 29/72 (40%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N +D +L +F G+ V+V+ D TGRSRGFGFV G+ EE AV + Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEM 251 Query: 292 NGYTFQGRPLRV 327 NG GR + V Sbjct: 252 NGKEVNGRMIYV 263 Score = 42.7 bits (99), Expect = 2e-04 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F G++ +V+ + G S+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVSTKPLYV 365 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L V A L F AG + + V D T RS G+ ++ + A++ Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72 Query: 292 NGYTFQGRPLRV 327 N +GRP+R+ Sbjct: 73 NFEVIKGRPIRI 84 Score = 36.6 bits (83), Expect = 0.015 Identities = 23/72 (31%), Positives = 35/72 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VF+ NL ++D+ L F G++ +VV D SRG+GFV + E A++ Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 729 Score = 50.8 bits (120), Expect = 7e-07 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV NL + V +L +F AG V +++ D+ G+SRG G VT E A+ F Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSIEAVQAISMF 263 Query: 292 NGYTFQGRPLRV--NSGPPPPRDEFAPRTPRAM 384 NG RP+ V + P D F P P+ + Sbjct: 264 NGQLLFDRPMHVKMDERALPKGDFFPPERPQQL 296 Score = 45.8 bits (107), Expect = 2e-05 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + F+ N+PF V L L E+ G V VE++ D G+SRG V E + A E Sbjct: 71 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 129 Query: 286 QFNGYTFQGRPLRVNSGP 339 N ++ GRPL+V P Sbjct: 130 VLNKHSLSGRPLKVKEDP 147 Score = 37.7 bits (86), Expect = 0.007 Identities = 23/73 (31%), Positives = 32/73 (43%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FV NLPF L F + G V ++ + G+S+G G V S E A Sbjct: 653 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 710 Query: 289 FNGYTFQGRPLRV 327 NG GR + V Sbjct: 711 MNGMKLSGREIDV 723
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 50.8 bits (120), Expect = 7e-07 Identities = 25/59 (42%), Positives = 36/59 (61%) Frame = +1 Query: 154 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 330 L +F + G + V VVYD+ TGRSRGF FV +++ A+E+ NG GR +RV+ Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 193
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 50.8 bits (120), Expect = 7e-07 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V N+ V +L F Q G++ +++ D G+S+GFGFV + EE AV+ F Sbjct: 306 IYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEK-GKSKGFGFVCFSTPEEAIDAVKTF 364 Query: 292 NGYTFQGRPLRV 327 +G F G+PL V Sbjct: 365 HGQMFHGKPLYV 376 Score = 39.3 bits (90), Expect = 0.002 Identities = 22/61 (36%), Positives = 35/61 (57%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV NLP +V +A L +F++ G++ +V G+SRG+GFV + AA++ Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTL 172 Query: 292 N 294 N Sbjct: 173 N 173 Score = 34.3 bits (77), Expect = 0.072 Identities = 20/72 (27%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L +V L F + S+ V + D +GRS +G+ S ++ A+E+ Sbjct: 26 LYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKK 85 Query: 292 NGYTFQGRPLRV 327 N G+ +RV Sbjct: 86 NNSLLNGKMIRV 97
>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4| protein) Length = 689 Score = 50.8 bits (120), Expect = 7e-07 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 2/93 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV NL + V +L +F AG V +++ D+ G+SRG G VT E A+ F Sbjct: 165 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSIEAVQAISMF 223 Query: 292 NGYTFQGRPLRV--NSGPPPPRDEFAPRTPRAM 384 NG RP+ V + P D F P P+ + Sbjct: 224 NGQLLFDRPMHVKMDERALPKGDFFPPERPQQL 256 Score = 45.8 bits (107), Expect = 2e-05 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + F+ N+PF V L L E+ G V VE++ D G+SRG V E + A E Sbjct: 70 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 128 Query: 286 QFNGYTFQGRPLRVNSGP 339 N ++ GRPL+V P Sbjct: 129 VLNKHSLSGRPLKVKEDP 146 Score = 37.7 bits (86), Expect = 0.007 Identities = 23/73 (31%), Positives = 32/73 (43%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FV NLPF L F + G V ++ + G+S+G G V S E A Sbjct: 613 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 670 Query: 289 FNGYTFQGRPLRV 327 NG GR + V Sbjct: 671 MNGMKLSGREIDV 683
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 50.8 bits (120), Expect = 7e-07 Identities = 29/73 (39%), Positives = 40/73 (54%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V+VG L V L LF QAG V + DR+TG+ +G+GFV S E+ A++ Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74 Query: 292 NGYTFQGRPLRVN 330 N G+P+RVN Sbjct: 75 NMIKLYGKPIRVN 87 Score = 44.3 bits (103), Expect = 7e-05 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSV-EMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +F+GNL +D L F G + + +++ D TG S+G+ F+ S + AA+E Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161 Query: 289 FNGYTFQGRPLRVN 330 NG RP+ V+ Sbjct: 162 MNGQYLCNRPITVS 175
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 50.1 bits (118), Expect = 1e-06 Identities = 27/86 (31%), Positives = 40/86 (46%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVGNL + L F Q G V +++ R G RG G V + ++V A+ Q+ Sbjct: 138 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRAIRQY 195 Query: 292 NGYTFQGRPLRVNSGPPPPRDEFAPR 369 +G F R + V PPP + R Sbjct: 196 DGAFFMDRKIFVRQDNPPPSNNIKER 221 Score = 47.0 bits (110), Expect = 1e-05 Identities = 26/75 (34%), Positives = 44/75 (58%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +V V NLP +V+ L +F++ G+V +V D G S G G V+ ++++ A+E+ Sbjct: 237 EVIVKNLPASVNWQALKDIFKECGNVAHADVELDG-DGVSTGSGTVSFYDIKDLHRAIEK 295 Query: 289 FNGYTFQGRPLRVNS 333 +NGY+ +G L V S Sbjct: 296 YNGYSIEGNVLDVKS 310 Score = 42.7 bits (99), Expect = 2e-04 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++ NLPF+ + L LFE G V E+ YD G G V +V++ +E+ Sbjct: 353 IYCSNLPFSTAKSDLYDLFETIGKVNNAELRYD-SKGAPTGIAVVEYDNVDDADVCIERL 411 Query: 292 NGYTFQGRPLRVN 330 N Y + G L ++ Sbjct: 412 NNYNYGGCDLDIS 424
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 50.1 bits (118), Expect = 1e-06 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 7/98 (7%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL F V +L +F AG+V+ ++ D+ G+SRG G VT E A+ F Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQAISMF 293 Query: 292 NGYTFQGRPLRVN-SGPPPPRDEF------APRTPRAM 384 NG RP+ V P +E+ P+ PR + Sbjct: 294 NGQFLFDRPMHVKMDDKSVPHEEYRSHDGKTPQLPRGL 331 Score = 47.4 bits (111), Expect = 8e-06 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 +VF+ N+P+ + + L E+ G V VE+ D G+SRG G V E V A+E Sbjct: 101 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKALE 159 Query: 286 QFNGYTFQGRPLRVNSGP 339 N Y GRPL + P Sbjct: 160 TMNKYDLSGRPLNIKEDP 177 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/73 (34%), Positives = 34/73 (46%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FV NLPF + +L F Q G V E+ + G+S+G G V S E A Sbjct: 524 QIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME--NGKSKGCGTVRFDSPESAEKACRI 581 Query: 289 FNGYTFQGRPLRV 327 NG GR + V Sbjct: 582 MNGIKISGREIDV 594
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 49.7 bits (117), Expect = 2e-06 Identities = 29/91 (31%), Positives = 42/91 (46%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG +P +L F++ G V V ++YD R RGFGF+T + V AV Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-N 172 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRTPRA 381 + + G+ + V P AP P A Sbjct: 173 MHFHDIMGKKVEVKRAEPRDSKSQAPGQPGA 203 Score = 40.4 bits (93), Expect = 0.001 Identities = 28/88 (31%), Positives = 39/88 (44%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L ++ L F Q G V ++ D+ T +SRGFGFV V + Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRT 372 +T GR ++ P PR RT Sbjct: 71 -RPHTLDGR--NIDPKPCTPRGMQPERT 95
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 49.7 bits (117), Expect = 2e-06 Identities = 27/58 (46%), Positives = 35/58 (60%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FEQ G++ V+ D T RSRGFGFVT +VE+V AA+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAM 71 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FEQ G +E++E++ DR +G+ RGF FVT V V Q Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQ 164
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/73 (34%), Positives = 37/73 (50%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FV NLP+T L LF + G + + D +T + +GF F+T E A + Sbjct: 403 RLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSE 462 Query: 289 FNGYTFQGRPLRV 327 +G FQGR L V Sbjct: 463 VDGQVFQGRMLHV 475 Score = 33.5 bits (75), Expect = 0.12 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRM-TGRSRGFGFV 246 K+ V N+PF S ++ LF G ++ V + TG RGFGFV Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFV 879 Score = 29.3 bits (64), Expect = 2.3 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++ V NLP + + LF G++ + + + G+ R FGF+ S EE A + Sbjct: 3 RLIVKNLPNGMKEERFRQLFAAFGTLTDCSLKFTK-DGKFRKFGFIGFKSEEEAQKAQKH 61 Query: 289 FN 294 FN Sbjct: 62 FN 63
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 49.7 bits (117), Expect = 2e-06 Identities = 29/91 (31%), Positives = 42/91 (46%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG +P +L F++ G V V ++YD R RGFGF+T + V AV Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-N 172 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRTPRA 381 + + G+ + V P AP P A Sbjct: 173 MHFHDIMGKKVEVKRAEPRDSKNQAPGQPGA 203 Score = 40.4 bits (93), Expect = 0.001 Identities = 28/88 (31%), Positives = 39/88 (44%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L ++ L F Q G V ++ D+ T +SRGFGFV V + Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRT 372 +T GR ++ P PR RT Sbjct: 71 -RPHTLDGR--NIDPKPCTPRGMQPERT 95
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 49.7 bits (117), Expect = 2e-06 Identities = 28/69 (40%), Positives = 41/69 (59%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 L +FVG LP + S QL LF Q G V+ VV ++ + RGFG+VT +E+V A++ Sbjct: 3 LTLFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62 Query: 286 QFNGYTFQG 312 + TF+G Sbjct: 63 EIT--TFEG 69 Score = 32.3 bits (72), Expect = 0.27 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 6/79 (7%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFG---FVTMGSVEEVAAAV 282 VF+ NL F + L + +Q G ++ V VV T S+G F+T + ++ AA Sbjct: 326 VFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAAA 385 Query: 283 E---QFNGYTFQGRPLRVN 330 + G GR L+V+ Sbjct: 386 SPEAEGGGLKLDGRQLKVD 404 Score = 32.0 bits (71), Expect = 0.36 Identities = 20/74 (27%), Positives = 35/74 (47%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++ + NL F L +F G+V V + + G+ RGF FV ++ E A++ Sbjct: 114 RLIIRNLSFKCSEDDLKAVFTHYGTVLEVNIP-KKPDGKMRGFAFVQFKNLLEAGKALKG 172 Query: 289 FNGYTFQGRPLRVN 330 N +GR + V+ Sbjct: 173 ANMKEIKGRTVAVD 186
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++ V N+PF L +FE+ G V VE++++ S+GFGFVTM ++ A ++ Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQE 211 Query: 289 FNGYTFQGRPLRVN 330 +G +GR + VN Sbjct: 212 LHGSMIEGRKIEVN 225
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 49.3 bits (116), Expect = 2e-06 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N +D +L +F G+ V+V+ D +GRSRGFGFV G+ EE AV + Sbjct: 193 VYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEM 251 Query: 292 NGYTFQGRPLRV 327 NG GR + V Sbjct: 252 NGKEVNGRMVYV 263 Score = 42.7 bits (99), Expect = 2e-04 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F G++ +V+ + G S+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG--GHSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVSTKPLYV 365 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/72 (27%), Positives = 35/72 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++G+L V A L F AG + + V D T RS G+ ++ + A++ Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTM 72 Query: 292 NGYTFQGRPLRV 327 N +GRP+R+ Sbjct: 73 NFEVIKGRPIRI 84 Score = 36.6 bits (83), Expect = 0.015 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VF+ NL ++D+ L F G + +VV D SRG+GFV + E A++ Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 49.3 bits (116), Expect = 2e-06 Identities = 28/72 (38%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N +D +L +F G+ V+V+ D +GRSRGFGFV G+ EE AV + Sbjct: 193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEM 251 Query: 292 NGYTFQGRPLRV 327 NG GR + V Sbjct: 252 NGKEVNGRMIYV 263 Score = 41.6 bits (96), Expect = 5e-04 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F G++ +V+ + G S+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVSTKPLYV 365 Score = 37.7 bits (86), Expect = 0.007 Identities = 19/72 (26%), Positives = 34/72 (47%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++G+L V A L F AG + + V D T RS + ++ + A++ Sbjct: 13 LYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTM 72 Query: 292 NGYTFQGRPLRV 327 N +GRP+R+ Sbjct: 73 NFEVIKGRPIRI 84 Score = 36.2 bits (82), Expect = 0.019 Identities = 23/72 (31%), Positives = 35/72 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VF+ NL ++D+ L F G++ +VV D SRG+GFV + E A++ Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETHEAANRAIQTM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 49.3 bits (116), Expect = 2e-06 Identities = 27/74 (36%), Positives = 40/74 (54%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + +++ NL T+D +L F GS+ +V+ + GRS+GFGFV S EE AV Sbjct: 294 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE--DGRSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVGSKPLYV 365 Score = 45.4 bits (106), Expect = 3e-05 Identities = 26/68 (38%), Positives = 36/68 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N VD L LF Q G V+V+ D G+S+GFGFV+ E+ AVE+ Sbjct: 193 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKAVEEM 251 Query: 292 NGYTFQGR 315 NG G+ Sbjct: 252 NGKEISGK 259 Score = 35.8 bits (81), Expect = 0.025 Identities = 22/72 (30%), Positives = 35/72 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VF+ NL ++D+ L F G++ +VV D S+G+ FV + E A+E+ Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 49.3 bits (116), Expect = 2e-06 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 19/109 (17%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE-- 285 VFVG + +D ++ F + GSV+ V+++ DR TG S+G+GFV+ + +V VE Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVESQ 100 Query: 286 -QFNG----------------YTFQGRPLRVNSGPPPPRDEFAPRTPRA 381 F+G Y Q RPL N PPPP+ + +P A Sbjct: 101 INFHGKKLKLGPAIRKQNLCTYHVQPRPLIFNP-PPPPQFQSVWSSPNA 148
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FE+ G ++ +E++ DR +G+ RGFGFVT + V V Q Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 172 Query: 289 ----FNGYTFQGR 315 NG+ + R Sbjct: 173 KYHTINGHNAEVR 185 Score = 47.4 bits (111), Expect = 8e-06 Identities = 25/58 (43%), Positives = 33/58 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L +EQ G + V+ D + RSRGFGFVT S+ EV AA+ Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM 79
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/59 (42%), Positives = 33/59 (55%) Frame = +1 Query: 154 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 330 L F G V +++ DR T RSRGFGFVT + E + +A+E NG GR + VN Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVN 61
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 48.9 bits (115), Expect = 3e-06 Identities = 27/78 (34%), Positives = 38/78 (48%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+ NL +T LF Q G +E V + + TG+ +GF V E AA E Sbjct: 302 RLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEA 361 Query: 289 FNGYTFQGRPLRVNSGPP 342 +G FQGR L + G P Sbjct: 362 QDGKIFQGRLLHILPGKP 379 Score = 37.0 bits (84), Expect = 0.011 Identities = 23/71 (32%), Positives = 31/71 (43%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ + NLPF + LF GS++ V V + SRGF F S +E A+ Sbjct: 704 KILIKNLPFEATKKDVQKLFGAFGSLKTVRVP-KKFNSESRGFAFAEYVSAKEAEHAMSA 762 Query: 289 FNGYTFQGRPL 321 G GR L Sbjct: 763 LQGTHLLGRRL 773 Score = 28.1 bits (61), Expect = 5.2 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 10/72 (13%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLF------EQAG----SVEMVEVVYDRMTGRSRGFGFVTMGS 258 ++ V NLP +D A L F + AG + V+VV R G++R FGFV S Sbjct: 3 RLIVKNLPPYLDEAGLKKHFSTVKDPKSAGFAPSDITDVKVVRAR-DGKTRRFGFVGFRS 61 Query: 259 VEEVAAAVEQFN 294 E AAV+ F+ Sbjct: 62 DETAEAAVKYFD 73
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FE+ G ++ +E++ DR +G+ RGFGFVT + V V Q Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 160 Query: 289 ----FNGYTFQGR 315 NG+ + R Sbjct: 161 KYHTINGHNAEVR 173 Score = 47.4 bits (111), Expect = 8e-06 Identities = 25/58 (43%), Positives = 33/58 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L +EQ G + V+ D + RSRGFGFVT S+ EV AA+ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM 67
>RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-binding motif protein| 11) Length = 281 Score = 48.9 bits (115), Expect = 3e-06 Identities = 30/72 (41%), Positives = 37/72 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVGNL V L LF QAG + V + DR G+ + FGFV E V+ A+ Sbjct: 12 VFVGNLEARVREEILYELFLQAGPLTKVTICKDR-EGKPKSFGFVCFKHPESVSYAIALL 70 Query: 292 NGYTFQGRPLRV 327 NG GRP+ V Sbjct: 71 NGIRLYGRPINV 82
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 48.5 bits (114), Expect = 4e-06 Identities = 27/58 (46%), Positives = 34/58 (58%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FE+ G++ V+ D T RSRGFGFVT VEEV AA+ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FE+ G +E +EV+ DR +G+ RGF FVT + V V Q Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 48.5 bits (114), Expect = 4e-06 Identities = 27/58 (46%), Positives = 33/58 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FEQ G + V+ D T RSRGFGFVT VEEV A++ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASM 85 Score = 46.6 bits (109), Expect = 1e-05 Identities = 23/60 (38%), Positives = 32/60 (53%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FE G +E +EV+ DR +G+ RGF FVT + V V Q Sbjct: 119 KIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 178
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 48.5 bits (114), Expect = 4e-06 Identities = 27/58 (46%), Positives = 34/58 (58%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FE+ G++ V+ D T RSRGFGFVT VEEV AA+ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FE+ G +E +EV+ DR +G+ RGF FVT + V V Q Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 48.5 bits (114), Expect = 4e-06 Identities = 27/58 (46%), Positives = 34/58 (58%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FE+ G++ V+ D T RSRGFGFVT VEEV AA+ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM 93 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FE+ G +E +EV+ DR +G+ RGF FVT + V V Q Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 186
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 48.5 bits (114), Expect = 4e-06 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL F V +L +F AG+V+ ++ D+ G+SRG G VT E A+ F Sbjct: 226 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQAISMF 284 Query: 292 NGYTFQGRPLRV 327 NG RP+ V Sbjct: 285 NGQFLFDRPMHV 296 Score = 47.4 bits (111), Expect = 8e-06 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 +VF+ N+P+ + + L E+ G V VE+ D G+SRG G V E V A+E Sbjct: 92 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKALE 150 Query: 286 QFNGYTFQGRPLRVNSGP 339 N Y GRPL + P Sbjct: 151 TMNKYDLSGRPLNIKEDP 168 Score = 41.6 bits (96), Expect = 5e-04 Identities = 25/73 (34%), Positives = 34/73 (46%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FV NLPF + +L F Q G V E+ + G+S+G G V S E A Sbjct: 515 QIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME--NGKSKGCGTVRFESAESAEKACRI 572 Query: 289 FNGYTFQGRPLRV 327 NG GR + V Sbjct: 573 MNGIKISGREIDV 585
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 48.5 bits (114), Expect = 4e-06 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 19/97 (19%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE-- 285 VFVG + +D ++ F + GSV+ V+++ DR TG S+G+GFV+ + +V VE Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVESQ 100 Query: 286 -QFNG----------------YTFQGRPLRVNSGPPP 345 F+G Y Q RPL N PPP Sbjct: 101 INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPP 137
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 48.5 bits (114), Expect = 4e-06 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 19/97 (19%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE-- 285 VFVG + +D ++ F + GSV+ V+++ DR TG S+G+GFV+ + +V VE Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVESQ 100 Query: 286 -QFNG----------------YTFQGRPLRVNSGPPP 345 F+G Y Q RPL N PPP Sbjct: 101 INFHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPP 137
>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2| (Suppressor of CDC2 with RNA-binding motif 3) Length = 407 Score = 48.5 bits (114), Expect = 4e-06 Identities = 26/81 (32%), Positives = 42/81 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NLP ++D +L G+ + G V ++ D +G SRG GF M S E+ A + F Sbjct: 137 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHF 195 Query: 292 NGYTFQGRPLRVNSGPPPPRD 354 N G+ ++ G P P D Sbjct: 196 N-----GKYIKTPPGVPAPSD 211
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 48.5 bits (114), Expect = 4e-06 Identities = 27/58 (46%), Positives = 33/58 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FEQ G + V+ D T RSRGFGFVT VEEV A++ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASM 85 Score = 44.3 bits (103), Expect = 7e-05 Identities = 22/60 (36%), Positives = 31/60 (51%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L E G +E +EV+ DR +G+ RGF FVT + V V Q Sbjct: 119 KIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 178
>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein| Length = 348 Score = 48.1 bits (113), Expect = 5e-06 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSR----GFGFVTMGSVEEVAA 276 +VFVG L + +++ LFE G+V V + + R+ +R G FVT + E+V Sbjct: 45 RVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDK 104 Query: 277 AVEQFNGYTFQGRPLRVNSGPP 342 A+E NG T R + V P Sbjct: 105 AIETLNGKTLDDREIVVQKARP 126 Score = 32.0 bits (71), Expect = 0.36 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +1 Query: 223 RSRGFGFVTMGSVEEVAAAVEQFNG 297 R RGFGFV+ + E+ + A+E+ NG Sbjct: 256 RGRGFGFVSFANAEDQSRAIEEMNG 280
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 48.1 bits (113), Expect = 5e-06 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLF-EQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +FVG+L V +QL LF + S ++V+D++TG S+G+GFV + +E A+ + Sbjct: 165 IFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSE 224 Query: 289 FNGYTFQGRPLRV 327 G GR ++V Sbjct: 225 MQGVFLNGRAIKV 237
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 48.1 bits (113), Expect = 5e-06 Identities = 25/77 (32%), Positives = 45/77 (58%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FVG + F + + L F Q GSV+ V++V DR G S+G+GFVT + E+ +++ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92 Query: 289 FNGYTFQGRPLRVNSGP 339 ++ + ++N GP Sbjct: 93 AEKLNYKDK--KLNIGP 107
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 48.1 bits (113), Expect = 5e-06 Identities = 25/77 (32%), Positives = 45/77 (58%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FVG + F + + L F Q GSV+ V++V DR G S+G+GFVT + E+ +++ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92 Query: 289 FNGYTFQGRPLRVNSGP 339 ++ + ++N GP Sbjct: 93 AEKLNYKDK--KLNIGP 107
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 48.1 bits (113), Expect = 5e-06 Identities = 26/74 (35%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL T+D +L F G++ +V+ D GRS+GFGFV + E AV Sbjct: 287 VNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDE-EGRSKGFGFVCFNAASEATCAVT 345 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 346 ELNGRVVGSKPLYV 359 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/72 (29%), Positives = 37/72 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+LP V+ + L F AG V + V D +T RS G+ +V + A++ Sbjct: 4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTM 63 Query: 292 NGYTFQGRPLRV 327 N + +P+R+ Sbjct: 64 NFDLVRNKPIRI 75 Score = 40.0 bits (92), Expect = 0.001 Identities = 22/62 (35%), Positives = 32/62 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V+V N D +L FE G + +V+ + G+S+GFGFV + E AAV+ Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243 Query: 292 NG 297 NG Sbjct: 244 NG 245 Score = 38.9 bits (89), Expect = 0.003 Identities = 24/89 (26%), Positives = 41/89 (46%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VF+ NL +D+ + F G++ +V D G S+G+GFV + E ++++ Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEK-GNSKGYGFVHFETEEAANTSIDKV 150 Query: 292 NGYTFQGRPLRVNSGPPPPRDEFAPRTPR 378 NG G+ + V +F PR R Sbjct: 151 NGMLLNGKKVYVG--------KFIPRKER 171
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 47.8 bits (112), Expect = 6e-06 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FE+ G +E E++ D+ +G+ RGFGFVT + V V Q Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQ 160 Query: 289 ----FNGYTFQGR 315 NG+ + R Sbjct: 161 KYHTINGHNAEVR 173 Score = 47.4 bits (111), Expect = 8e-06 Identities = 27/69 (39%), Positives = 36/69 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L F L +EQ G + V+ D + RSRGFGFVT + EV AA+ Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSA 69 Query: 289 FNGYTFQGR 315 +T GR Sbjct: 70 -RPHTIDGR 77
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 47.8 bits (112), Expect = 6e-06 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FEQ G +E++E++ DR +G+ RGF FVT + V V Q Sbjct: 106 KIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQ 165 Score = 45.8 bits (107), Expect = 2e-05 Identities = 26/58 (44%), Positives = 34/58 (58%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L F L FEQ G++ V+ D + RSRGFGFVT S +EV AA+ Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAM 72
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 47.8 bits (112), Expect = 6e-06 Identities = 26/77 (33%), Positives = 37/77 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG L VD L F G + +++ D T + RGF FV E+ AAA++ Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 292 NGYTFQGRPLRVNSGPP 342 N GR +RVN P Sbjct: 68 NESELFGRTIRVNLAKP 84
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 47.8 bits (112), Expect = 6e-06 Identities = 26/77 (33%), Positives = 37/77 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG L VD L F G + +++ D T + RGF FV E+ AAA++ Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 292 NGYTFQGRPLRVNSGPP 342 N GR +RVN P Sbjct: 68 NESELFGRTIRVNLAKP 84
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 47.8 bits (112), Expect = 6e-06 Identities = 21/73 (28%), Positives = 39/73 (53%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FV NLP+ + L +F + G +E + V +D + S+GF +V + A ++ Sbjct: 302 RLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKE 361 Query: 289 FNGYTFQGRPLRV 327 +G FQGR + + Sbjct: 362 LDGKHFQGRLMHI 374 Score = 34.3 bits (77), Expect = 0.072 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVV--YDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+ + NLPF + LF G + V V +DR +RGFGF S E A+ Sbjct: 703 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRS---ARGFGFADFVSAREAENAM 759 Query: 283 EQFNGYTFQGRPL 321 + GR L Sbjct: 760 DALKNTHLLGRRL 772
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 47.4 bits (111), Expect = 8e-06 Identities = 19/73 (26%), Positives = 41/73 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVG + ++ +L+ LF + G + ++++YD+ G G+GF++ + + +++ Sbjct: 197 IFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKEL 256 Query: 292 NGYTFQGRPLRVN 330 NG T G L +N Sbjct: 257 NGRTVNGSTLFIN 269 Score = 34.7 bits (78), Expect = 0.055 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +1 Query: 229 RGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 330 +G+GF+ + + E+ AA+E FNG+ + G L VN Sbjct: 381 KGYGFIKLINHEQALAAIETFNGFMWHGNRLVVN 414 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 208 DRMTGRSRGFGFVTMGSVEEVAAAVEQFNGY 300 D G SRG+GFV+ S + A A+ +GY Sbjct: 593 DLPVGSSRGYGFVSFESPLDAAKAILNTDGY 623
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 47.4 bits (111), Expect = 8e-06 Identities = 26/91 (28%), Positives = 43/91 (47%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + L +F + G + V ++ DR T +SRGF F+T + + A + Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKD 67 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRTPRA 381 NG + G+ ++V P R P A Sbjct: 68 MNGKSLHGKAIKVEQAKKPSFQSGGRRRPPA 98
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 47.4 bits (111), Expect = 8e-06 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NL T++ +L F GS+ +V+ + G+ +GFG V S EE AV++ Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 292 NGYTFQGRPLRVNSG 336 NG +PL V G Sbjct: 362 NGRVVGSKPLHVTLG 376 Score = 44.7 bits (104), Expect = 5e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV N+ +D +L LF + G E V+V+ D +G+S+GFGFV + E AV Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 292 NGYTFQGRPLRV 327 +G + G+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 32.3 bits (72), Expect = 0.27 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L V L F AG + + D +T G+G+V + A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 292 NGYTFQGRPLRVNSGPPPPR 351 N G+P R+ P R Sbjct: 80 NFDLINGKPFRLMWSQPDDR 99
>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export| factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) Length = 254 Score = 47.4 bits (111), Expect = 8e-06 Identities = 26/73 (35%), Positives = 39/73 (53%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ V NL F V A + LF + G+++ V YDR +GRS G V + A++Q Sbjct: 105 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQ 163 Query: 289 FNGYTFQGRPLRV 327 +NG GRP+ + Sbjct: 164 YNGVPLDGRPMNI 176
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 47.4 bits (111), Expect = 8e-06 Identities = 23/59 (38%), Positives = 35/59 (59%) Frame = +1 Query: 154 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 330 L +F + G + V +VYD+ + RSRGF FV +V++ A E+ NG GR +RV+ Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 47.4 bits (111), Expect = 8e-06 Identities = 23/59 (38%), Positives = 35/59 (59%) Frame = +1 Query: 154 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 330 L +F + G + V +VYD+ + RSRGF FV +V++ A E+ NG GR +RV+ Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 47.4 bits (111), Expect = 8e-06 Identities = 23/59 (38%), Positives = 35/59 (59%) Frame = +1 Query: 154 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVN 330 L +F + G + V +VYD+ + RSRGF FV +V++ A E+ NG GR +RV+ Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192
>THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1)| (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF) Length = 256 Score = 47.4 bits (111), Expect = 8e-06 Identities = 26/73 (35%), Positives = 39/73 (53%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ V NL F V A + LF + G+++ V YDR +GRS G V + A++Q Sbjct: 106 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQ 164 Query: 289 FNGYTFQGRPLRV 327 +NG GRP+ + Sbjct: 165 YNGVPLDGRPMNI 177
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 47.0 bits (110), Expect = 1e-05 Identities = 26/73 (35%), Positives = 38/73 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG L V + L L QAG V V + DR+T +GFGFV E+ A++ Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74 Query: 292 NGYTFQGRPLRVN 330 N G+P++VN Sbjct: 75 NMIKLYGKPIKVN 87 Score = 40.4 bits (93), Expect = 0.001 Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMV-EVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +FVGNL VD L F G + V +++ D +G S+GF F+ S E A+E Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161 Query: 289 FNGYTFQGRPLRVN 330 NG R + V+ Sbjct: 162 MNGQFLCNRAITVS 175
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/64 (34%), Positives = 39/64 (60%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FVG +P + +L LFE+AG + + ++ D +TG +RG+ FVT + E AV+ Sbjct: 73 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 132 Query: 289 FNGY 300 +N + Sbjct: 133 YNNH 136 Score = 32.3 bits (72), Expect = 0.27 Identities = 21/78 (26%), Positives = 33/78 (42%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL TV L F Q G +E V+ + D + F+ + A+E+ Sbjct: 250 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 301 Query: 292 NGYTFQGRPLRVNSGPPP 345 NG +G + + PP Sbjct: 302 NGKDLEGENIEIVFAKPP 319
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 47.0 bits (110), Expect = 1e-05 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVG+L + + + F G + VV D TG+S+G+GFV+ + + A+ Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175 Query: 292 NGYTFQGRPLRVN---SGPPPPR 351 G GR +R N PP P+ Sbjct: 176 GGQWLGGRQIRTNWATRKPPAPK 198 Score = 29.6 bits (65), Expect = 1.8 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 15/93 (16%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGR----SRGFG-----------FV 246 ++VGNL V + LF Q G + +++ ++ R S GF FV Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFV 70 Query: 247 TMGSVEEVAAAVEQFNGYTFQGRPLRVNSGPPP 345 + AAA+ NG G+ ++VN P Sbjct: 71 EFYEHRDAAAALAAMNGRKILGKEVKVNWATTP 103
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/73 (30%), Positives = 36/73 (49%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+ N+ + LF Q G++E V + D TG+S+GF +V E+ A Sbjct: 311 RLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRS 370 Query: 289 FNGYTFQGRPLRV 327 + FQGR L + Sbjct: 371 LDKQIFQGRLLHI 383 Score = 38.5 bits (88), Expect = 0.004 Identities = 24/82 (29%), Positives = 35/82 (42%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ + NLPF L LF G ++ V V + +RGF FV ++E A+ Q Sbjct: 718 KIIIKNLPFEATRKDLLELFGAFGQLKSVRVP-KKFDQSARGFAFVEFNLMKEAETAMSQ 776 Query: 289 FNGYTFQGRPLRVNSGPPPPRD 354 G GR L + P + Sbjct: 777 LEGVHLLGRRLVMQYAEQDPEN 798
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/64 (34%), Positives = 39/64 (60%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FVG +P + +L LFE+AG + + ++ D +TG +RG+ FVT + E AV+ Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222 Query: 289 FNGY 300 +N + Sbjct: 223 YNNH 226 Score = 32.3 bits (72), Expect = 0.27 Identities = 21/78 (26%), Positives = 33/78 (42%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL TV L F Q G +E V+ + D + F+ + A+E+ Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391 Query: 292 NGYTFQGRPLRVNSGPPP 345 NG +G + + PP Sbjct: 392 NGKDLEGENIEIVFAKPP 409
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/64 (34%), Positives = 39/64 (60%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FVG +P + +L LFE+AG + + ++ D +TG +RG+ FVT + E AV+ Sbjct: 163 EIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKL 222 Query: 289 FNGY 300 +N + Sbjct: 223 YNNH 226 Score = 32.7 bits (73), Expect = 0.21 Identities = 21/78 (26%), Positives = 33/78 (42%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL TV L F Q G +E V+ + D + F+ + A+E+ Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391 Query: 292 NGYTFQGRPLRVNSGPPP 345 NG +G + + PP Sbjct: 392 NGKDLEGENIEIVFAKPP 409
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 + V LP + +L LF G + ++ D TG S G+GFV GS + A+ Sbjct: 80 LIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNL 139 Query: 292 NGYTFQGRPLRVNSGPP 342 NG T + + ++V+ P Sbjct: 140 NGITVRNKRIKVSFARP 156
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 47.0 bits (110), Expect = 1e-05 Identities = 27/69 (39%), Positives = 37/69 (53%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L F L +EQ G++ V+ D + RSRGFGFVT + EV AA+ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69 Query: 289 FNGYTFQGR 315 +T GR Sbjct: 70 -RPHTIDGR 77 Score = 45.1 bits (105), Expect = 4e-05 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + + L FE+ G ++ +E++ D+ +G+ RGF FVT + V V Q Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQ 160 Query: 289 ----FNGYTFQGR 315 NG+ + R Sbjct: 161 KYHTINGHNAEVR 173
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NL T++ +L F GS+ +V+ + G+ +GFG V S EE AV++ Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 292 NGYTFQGRPLRVNSG 336 NG +PL V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 44.7 bits (104), Expect = 5e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV N+ +D +L LF + G E V+V+ D +G+S+GFGFV + E AV Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 292 NGYTFQGRPLRV 327 +G + G+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 32.3 bits (72), Expect = 0.27 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L V L F AG + + D +T G+G+V + A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 292 NGYTFQGRPLRVNSGPPPPR 351 N G+P R+ P R Sbjct: 80 NFDLINGKPFRLMWSQPDDR 99
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NL T++ +L F GS+ +V+ + G+ +GFG V S EE AV++ Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 292 NGYTFQGRPLRVNSG 336 NG +PL V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 44.7 bits (104), Expect = 5e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV N+ +D +L LF + G E V+V+ D +G+S+GFGFV + E AV Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 292 NGYTFQGRPLRV 327 +G + G+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 32.3 bits (72), Expect = 0.27 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L V L F AG + + D +T G+G+V + A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 292 NGYTFQGRPLRVNSGPPPPR 351 N G+P R+ P R Sbjct: 80 NFDLINGKPFRLMWSQPDDR 99
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NL T++ +L F GS+ +V+ + G+ +GFG V S EE AV++ Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 292 NGYTFQGRPLRVNSG 336 NG +PL V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 44.7 bits (104), Expect = 5e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV N+ +D +L LF + G E V+V+ D +G+S+GFGFV + E AV Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 292 NGYTFQGRPLRV 327 +G + G+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 32.3 bits (72), Expect = 0.27 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L V L F AG + + D +T G+G+V + A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 292 NGYTFQGRPLRVNSGPPPPR 351 N G+P R+ P R Sbjct: 80 NFDLINGKPFRLMWSQPDDR 99
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NL T++ +L F GS+ +V+ + G+ +GFG V S EE AV++ Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 292 NGYTFQGRPLRVNSG 336 NG +PL V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 44.7 bits (104), Expect = 5e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV N+ +D +L LF + G E V+V+ D +G+S+GFGFV + E AV Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 292 NGYTFQGRPLRV 327 +G + G+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 32.3 bits (72), Expect = 0.27 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L V L F AG + + D +T G+G+V + A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 292 NGYTFQGRPLRVNSGPPPPR 351 N G+P R+ P R Sbjct: 80 NFDLINGKPFRLMWSQPDDR 99
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NL T++ +L F GS+ +V+ + G+ +GFG V S EE AV++ Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 292 NGYTFQGRPLRVNSG 336 NG +PL V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 44.7 bits (104), Expect = 5e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV N+ +D +L LF + G E V+V+ D +G+S+GFGFV + E AV Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 292 NGYTFQGRPLRV 327 +G + G+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 32.3 bits (72), Expect = 0.27 Identities = 20/80 (25%), Positives = 32/80 (40%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L V L F AG + + D +T G+G+V + A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 292 NGYTFQGRPLRVNSGPPPPR 351 N G+P R+ P R Sbjct: 80 NFDLINGKPFRLMWSQPDDR 99
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 47.0 bits (110), Expect = 1e-05 Identities = 27/89 (30%), Positives = 39/89 (43%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG +P +L F + G V V ++YD R RGFGF+T + V AV Sbjct: 115 KIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV-N 173 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRTP 375 + + G+ + V P P P Sbjct: 174 MHFHDIMGKKVEVKRAEPRDSKSQTPGPP 202 Score = 40.0 bits (92), Expect = 0.001 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 9/99 (9%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFV------TMGSVEEV 270 K+FVG L ++ L F Q G V ++ D+ T +SRGFGFV +G+V + Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV--L 68 Query: 271 AAAVEQFNGYTFQGRPLRVNSGPPP---PRDEFAPRTPR 378 A+ +G +P P PR+ + + PR Sbjct: 69 ASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPR 107
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 47.0 bits (110), Expect = 1e-05 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V NLP T+ QL +F + GS+ ++ D++TGR RG FV EE A+ Sbjct: 215 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274 Query: 292 NGYTFQG--RPLRV 327 N +G +PL V Sbjct: 275 NNVIPEGGSQPLSV 288
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 47.0 bits (110), Expect = 1e-05 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V NLP T+ QL +F + GS+ ++ D++TGR RG FV EE A+ Sbjct: 213 LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272 Query: 292 NGYTFQG--RPLRV 327 N +G +PL V Sbjct: 273 NNVIPEGGSQPLSV 286
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 47.0 bits (110), Expect = 1e-05 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV-AAAVE 285 K+FVG L V L F Q G+VE E++ D+ +G+ RGFGFV + + AAV Sbjct: 99 KLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVV 158 Query: 286 QFNGYTFQGRPLRVNSGPP 342 +F + QG + V P Sbjct: 159 KF--HPIQGHRVEVKKAVP 175 Score = 44.3 bits (103), Expect = 7e-05 Identities = 25/58 (43%), Positives = 33/58 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+F+G L + L G FE G++ VV + T RSR FGFVT +VEE AA+ Sbjct: 8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAM 65
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 47.0 bits (110), Expect = 1e-05 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFVG+L + + + F G + VV D TG+S+G+GFV+ + + A+ Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158 Query: 292 NGYTFQGRPLRVN---SGPPPPR 351 G GR +R N PP P+ Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPK 181 Score = 31.6 bits (70), Expect = 0.47 Identities = 20/78 (25%), Positives = 35/78 (44%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VGNL V + LF Q G + +++ + + + FV + AAA+ Sbjct: 11 LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRDAAAALAAM 68 Query: 292 NGYTFQGRPLRVNSGPPP 345 NG G+ ++VN P Sbjct: 69 NGRKILGKEVKVNWATTP 86
>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34) Length = 293 Score = 46.6 bits (109), Expect = 1e-05 Identities = 25/77 (32%), Positives = 36/77 (46%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V+V +LP +D Q+ F Q G+V + + TG S+G+ FV S + E Sbjct: 47 VYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETM 106 Query: 292 NGYTFQGRPLRVNSGPP 342 N Y F R L + PP Sbjct: 107 NNYLFGERLLECHFMPP 123
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 46.6 bits (109), Expect = 1e-05 Identities = 24/77 (31%), Positives = 44/77 (57%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FVG + F + L F Q GSV+ V++V DR G S+G+GF+T + E+ +++ Sbjct: 34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQE 92 Query: 289 FNGYTFQGRPLRVNSGP 339 ++ + ++N GP Sbjct: 93 AEKLNYKDK--KLNIGP 107
>MRD1_KLULA (Q6CQR6) Multiple RNA-binding domain-containing protein 1| Length = 878 Score = 46.6 bits (109), Expect = 1e-05 Identities = 22/73 (30%), Positives = 37/73 (50%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+ N+ +T LF G +E V + D TG+S+GF +V + + A A + Sbjct: 331 RLFLRNILYTATEDDFRKLFSPYGELEEVHIAVDTRTGQSKGFAYVLFKNADNAATAFVE 390 Query: 289 FNGYTFQGRPLRV 327 + FQGR L + Sbjct: 391 LDKQIFQGRLLHI 403 Score = 36.6 bits (83), Expect = 0.015 Identities = 25/82 (30%), Positives = 35/82 (42%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ V NLPF + LF G ++ V V + +RGF FV +E A++Q Sbjct: 753 KIIVKNLPFEATRKDVFELFSSFGQLKSVRVP-KKFDKSARGFAFVEFLLPKEAENAMDQ 811 Query: 289 FNGYTFQGRPLRVNSGPPPPRD 354 G GR L + P D Sbjct: 812 LQGVHLLGRRLVMEFVEQDPED 833
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 46.6 bits (109), Expect = 1e-05 Identities = 24/74 (32%), Positives = 36/74 (48%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+++G L D L F V V+ +++TGRSRG+GFV S + +A+ Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISA 91 Query: 289 FNGYTFQGRPLRVN 330 NG G + VN Sbjct: 92 MNGQELNGFNISVN 105
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 46.2 bits (108), Expect = 2e-05 Identities = 26/73 (35%), Positives = 35/73 (47%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVGNL VD L F G + V GRS+G+GFV+ S E AA+E Sbjct: 101 LFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAM 160 Query: 292 NGYTFQGRPLRVN 330 N +P+ V+ Sbjct: 161 NNQFLMNKPITVS 173 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/73 (32%), Positives = 36/73 (49%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++GNL V + L L QAG V + + DR+ GFGF ++V A + Sbjct: 13 IYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQIL 72 Query: 292 NGYTFQGRPLRVN 330 N G+P+RVN Sbjct: 73 NQVKLFGKPIRVN 85
>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2| Length = 383 Score = 46.2 bits (108), Expect = 2e-05 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NLP ++D +L G+ + G V ++ D +G SRG GF M S E+ A + F Sbjct: 139 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCEAIITHF 197 Query: 292 NG 297 NG Sbjct: 198 NG 199
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/75 (32%), Positives = 41/75 (54%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++ V N+PF L +F Q G + VE++++ S+GFGFVT + + A E+ Sbjct: 118 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 175 Query: 289 FNGYTFQGRPLRVNS 333 +G +GR + VN+ Sbjct: 176 LHGTVVEGRKIEVNN 190
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 46.2 bits (108), Expect = 2e-05 Identities = 27/92 (29%), Positives = 45/92 (48%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++ V N+ F + + +FE G +E V + D RS+GFG++ + A+E+ Sbjct: 341 RLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQN-RSKGFGYIQYRNPISARNALEK 399 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRTPRAM 384 NG+ GR +RV G D+F T +M Sbjct: 400 MNGFDLAGRNMRVCLG----NDKFTTETTSSM 427 Score = 43.9 bits (102), Expect = 9e-05 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VFV L + S +L FEQAG V ++V D+++GRS+G +V + V AA+ Sbjct: 242 VFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI-AL 300 Query: 292 NGYTFQGRPLRV 327 +G G P+ V Sbjct: 301 SGKRLLGLPVIV 312
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/75 (32%), Positives = 41/75 (54%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++ V N+PF L +F Q G + VE++++ S+GFGFVT + + A E+ Sbjct: 117 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 174 Query: 289 FNGYTFQGRPLRVNS 333 +G +GR + VN+ Sbjct: 175 LHGTVVEGRKIEVNN 189
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 46.2 bits (108), Expect = 2e-05 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 3/92 (3%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL ++D+ L F G++ +V D +TGRS+G+GFV E AA+++ Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKL 196 Query: 292 NGYTFQGRPLRVN---SGPPPPRDEFAPRTPR 378 NG + + V RDE P TPR Sbjct: 197 NGMLMNDKQVFVGHFIRRQERARDENTP-TPR 227 Score = 43.9 bits (102), Expect = 9e-05 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NL +VD +L +F + G+V +V+ + G SRGFGFV + EE A+ + Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEM 392 Query: 292 NGYTFQGRPLRV 327 NG +PL + Sbjct: 393 NGKMIGRKPLYI 404 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/62 (38%), Positives = 34/62 (54%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V+V NLP + +L F + G + V+ D+ +G SR FGFV E A+AVE+ Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEKM 289 Query: 292 NG 297 NG Sbjct: 290 NG 291
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/75 (32%), Positives = 41/75 (54%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++ V N+PF L +F Q G + VE++++ S+GFGFVT + + A E+ Sbjct: 122 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 179 Query: 289 FNGYTFQGRPLRVNS 333 +G +GR + VN+ Sbjct: 180 LHGTVVEGRKIEVNN 194
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 46.2 bits (108), Expect = 2e-05 Identities = 25/73 (34%), Positives = 35/73 (47%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FV NL +T L LF G + + D +T + +GF FVT E A + Sbjct: 401 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 460 Query: 289 FNGYTFQGRPLRV 327 +G FQGR L V Sbjct: 461 VDGQVFQGRMLHV 473 Score = 40.0 bits (92), Expect = 0.001 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGR---SRGFGFVTMGSVEEVAAAV 282 +F+ NL F+ L G+F + G+++ + + S GFGFV E+ A+ Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKAL 783 Query: 283 EQFNGYTFQGRPLRV 327 +Q G+T G L V Sbjct: 784 KQLQGHTVDGHKLEV 798 Score = 32.7 bits (73), Expect = 0.21 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRM-TGRSRGFGFV 246 K+ V N+PF + ++ LF G ++ V + TG RGFGFV Sbjct: 825 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFV 871
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 45.8 bits (107), Expect = 2e-05 Identities = 26/74 (35%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F G++ +V+ + GRS+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 43.9 bits (102), Expect = 9e-05 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N +D +L LF + G V+V+ D +G+S+GFGFV+ E+ AV++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 292 NGYTFQGRPLRV 327 NG G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 34.3 bits (77), Expect = 0.072 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL ++++ L G++ VV D S+G+GFV + E A+++ Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKM 158 Query: 292 NGYTFQGRPLRV 327 NG GR + V Sbjct: 159 NGMLLNGRKVFV 170
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 45.8 bits (107), Expect = 2e-05 Identities = 27/74 (36%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F GS+ +V+ + GRS+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 41.6 bits (96), Expect = 5e-04 Identities = 25/72 (34%), Positives = 38/72 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N +D +L F Q G+ V+V+ D G+SRGFGFV+ E+ AV+ Sbjct: 193 VYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDM 251 Query: 292 NGYTFQGRPLRV 327 NG G+ + V Sbjct: 252 NGKDLNGKAIFV 263 Score = 37.0 bits (84), Expect = 0.011 Identities = 21/72 (29%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL ++D+ L F G++ +VV D S+G+GFV + E A+++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 45.8 bits (107), Expect = 2e-05 Identities = 26/77 (33%), Positives = 37/77 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+LP + QL FEQ G V + V + TG S+G+GFV E E Sbjct: 47 LYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETM 106 Query: 292 NGYTFQGRPLRVNSGPP 342 N Y R ++ + PP Sbjct: 107 NNYLMGERIIKCHVIPP 123
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 45.8 bits (107), Expect = 2e-05 Identities = 25/73 (34%), Positives = 38/73 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 KV+VGNLP V ++ +F + G ++ V++ +GR F FV + AV Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAEDAVRA 65 Query: 289 FNGYTFQGRPLRV 327 +GY F GR +RV Sbjct: 66 RDGYEFDGRRIRV 78
>SCE3_SCHPO (O14369) Probable RNA-binding protein sce3| Length = 388 Score = 45.8 bits (107), Expect = 2e-05 Identities = 26/75 (34%), Positives = 40/75 (53%) Frame = +1 Query: 118 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 297 VGNL F + L F + V + +V D +T RSRGFG+V + + ++AA+ +G Sbjct: 98 VGNLSFDLTENDLGDFFGEG--VTSIRLVIDPLTERSRGFGYVEFETADTLSAAL-ALSG 154 Query: 298 YTFQGRPLRVNSGPP 342 GRP+R+ P Sbjct: 155 EDLMGRPVRITVAEP 169
>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (Poly(A)-binding protein II) (PABII) Length = 166 Score = 45.4 bits (106), Expect = 3e-05 Identities = 24/72 (33%), Positives = 37/72 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V+VGN+ ++V +L F GSV V ++ D+ TG +GF ++ V A+ Sbjct: 57 VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNAL-LL 115 Query: 292 NGYTFQGRPLRV 327 NG RPL+V Sbjct: 116 NGSMLHERPLKV 127
>DAZ1_HUMAN (Q9NQZ3) Deleted in azoospermia protein 1| Length = 744 Score = 45.4 bits (106), Expect = 3e-05 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 19/107 (17%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 282 VFVG + +D ++ F + GSV+ V+++ +R TG S+G+GFV+ + V+++ + Sbjct: 372 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 430 Query: 283 EQFNGYTF----------------QGRPLRVNSGPPPPRDEFAPRTP 375 F+G Q RPL VN PPPP+ + R P Sbjct: 431 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNP-PPPPQFQNVWRNP 476 Score = 45.4 bits (106), Expect = 3e-05 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 19/107 (17%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 282 VFVG + +D ++ F + GSV+ V+++ +R TG S+G+GFV+ + V+++ + Sbjct: 207 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 265 Query: 283 EQFNGYTF----------------QGRPLRVNSGPPPPRDEFAPRTP 375 F+G Q RPL VN PPPP+ + R P Sbjct: 266 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNP-PPPPQFQNVWRNP 311 Score = 45.4 bits (106), Expect = 3e-05 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 19/107 (17%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 282 VFVG + +D ++ F + GSV+ V+++ +R TG S+G+GFV+ + V+++ + Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 100 Query: 283 EQFNGYTF----------------QGRPLRVNSGPPPPRDEFAPRTP 375 F+G Q RPL VN PPPP+ + R P Sbjct: 101 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNP-PPPPQFQNVWRNP 146
>DAZ2_HUMAN (Q13117) Deleted in azoospermia protein 2| Length = 558 Score = 45.4 bits (106), Expect = 3e-05 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 19/107 (17%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 282 VFVG + +D ++ F + GSV+ V+++ +R TG S+G+GFV+ + V+++ + Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 100 Query: 283 EQFNGYTF----------------QGRPLRVNSGPPPPRDEFAPRTP 375 F+G Q RPL VN PPPP+ + R P Sbjct: 101 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNP-PPPPQFQNVWRNP 146
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 45.4 bits (106), Expect = 3e-05 Identities = 25/74 (33%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + +F+ NL VD +L F G++ +++ D G+S+GFGFV + EE AV Sbjct: 364 VNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQ-GKSKGFGFVCYTTPEEANKAVT 422 Query: 286 QFNGYTFQGRPLRV 327 + N G+PL V Sbjct: 423 EMNQRMLAGKPLYV 436 Score = 43.5 bits (101), Expect = 1e-04 Identities = 24/72 (33%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VF+ NL +D+ L F G + +V D + G ++G+GFV SVE AA+E Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDEL-GNAKGYGFVHFDSVESANAAIEHV 228 Query: 292 NGYTFQGRPLRV 327 NG + + V Sbjct: 229 NGMLLNDKKVYV 240 Score = 40.8 bits (94), Expect = 8e-04 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ NL + + + LF Q G + + +V D+ + RGFGFV + E AV++ Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVDEL 321 Query: 292 NGYTFQGRPLRV 327 N ++G+ L V Sbjct: 322 NDKEYKGKKLYV 333
>DAZ4_HUMAN (Q86SG3) Deleted in azoospermia protein 4| Length = 579 Score = 45.4 bits (106), Expect = 3e-05 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 19/107 (17%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 282 VFVG + +D ++ F + GSV+ V+++ +R TG S+G+GFV+ + V+++ + Sbjct: 207 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 265 Query: 283 EQFNGYTF----------------QGRPLRVNSGPPPPRDEFAPRTP 375 F+G Q RPL VN PPPP+ + R P Sbjct: 266 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNP-PPPPQFQNVWRNP 311 Score = 45.4 bits (106), Expect = 3e-05 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 19/107 (17%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 282 VFVG + +D ++ F + GSV+ V+++ +R TG S+G+GFV+ + V+++ + Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 100 Query: 283 EQFNGYTF----------------QGRPLRVNSGPPPPRDEFAPRTP 375 F+G Q RPL VN PPPP+ + R P Sbjct: 101 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNP-PPPPQFQNVWRNP 146
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 45.4 bits (106), Expect = 3e-05 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V NLP T+ +L +F + G++ ++ D++TGR RG FV EE A+ Sbjct: 190 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISAL 249 Query: 292 NGYTFQG--RPLRV 327 N +G +PL V Sbjct: 250 NNVIPEGASQPLTV 263
>DAZ3_HUMAN (Q9NR90) Deleted in azoospermia protein 3| Length = 486 Score = 45.4 bits (106), Expect = 3e-05 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 19/107 (17%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGS---VEEVAAAV 282 VFVG + +D ++ F + GSV+ V+++ +R TG S+G+GFV+ + V+++ + Sbjct: 42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNR-TGVSKGYGFVSFVNDVDVQKIVGSQ 100 Query: 283 EQFNGYTF----------------QGRPLRVNSGPPPPRDEFAPRTP 375 F+G Q RPL VN PPPP+ + R P Sbjct: 101 IHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNP-PPPPQFQNVWRNP 146
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 45.1 bits (105), Expect = 4e-05 Identities = 26/74 (35%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F G++ +V+ + GRS+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 43.5 bits (101), Expect = 1e-04 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N +D +L LF + G V+V+ D +G+S+GFGFV+ E+ AV++ Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 292 NGYTFQGRPLRV 327 NG G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL ++D+ L F G++ +VV D S+G+GFV + E A+E+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 45.1 bits (105), Expect = 4e-05 Identities = 26/74 (35%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F G++ +V+ + GRS+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 43.5 bits (101), Expect = 1e-04 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N +D +L LF + G V+V+ D +G+S+GFGFV+ E+ AV++ Sbjct: 193 VYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 292 NGYTFQGRPLRV 327 NG G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL ++D+ L F G++ +VV D S+G+GFV + E A+E+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 45.1 bits (105), Expect = 4e-05 Identities = 26/74 (35%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F G++ +V+ + GRS+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 43.9 bits (102), Expect = 9e-05 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N +D +L LF + G V+V+ D +G+S+GFGFV+ E+ AV++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 292 NGYTFQGRPLRV 327 NG G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL ++D+ L F G++ +VV D S+G+GFV + E A+E+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 45.1 bits (105), Expect = 4e-05 Identities = 26/74 (35%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F G++ +V+ + GRS+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 43.9 bits (102), Expect = 9e-05 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N +D +L LF + G V+V+ D +G+S+GFGFV+ E+ AV++ Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 292 NGYTFQGRPLRV 327 NG G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 38.1 bits (87), Expect = 0.005 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL ++D+ L F G++ +VV D S+G+GFV + E A+E+ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 45.1 bits (105), Expect = 4e-05 Identities = 24/60 (40%), Positives = 32/60 (53%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L + + Q G + + V+ D T RSRGFGFVT EV AA++Q Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83 Score = 33.9 bits (76), Expect = 0.094 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = +1 Query: 154 LAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 L F + G+V E++ D+ T + RGFGFVT + V V Q Sbjct: 130 LTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
>LARK_DROME (Q94901) RNA-binding protein lark| Length = 352 Score = 45.1 bits (105), Expect = 4e-05 Identities = 27/89 (30%), Positives = 45/89 (50%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+GNL + +L LFE+ G+V +VV + +GFV M + ++ A++ Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVV--------KNYGFVHMETEQQGRDAIQN 59 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRTP 375 NGYT ++V + + AP TP Sbjct: 60 LNGYTLNEFAIKVEAA----KSRRAPNTP 84 Score = 44.7 bits (104), Expect = 5e-05 Identities = 24/73 (32%), Positives = 41/73 (56%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVGNL + ++ LF++ G+V ++V R +GFV + V +V A+++ Sbjct: 87 KIFVGNLTDKTRAPEVRELFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAIKE 138 Query: 289 FNGYTFQGRPLRV 327 NG G+PL+V Sbjct: 139 LNGRVVDGQPLKV 151
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 44.7 bits (104), Expect = 5e-05 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 K+FVG L + FEQ G V+ +++D+ T R RGFGFVT S + V E Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 249 K+F+G L + L F Q G V+ V+ D +T RSRGFGFVT Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 44.7 bits (104), Expect = 5e-05 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 K+FVG L + FEQ G V+ +++D+ T R RGFGFVT S + V E Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 249 K+F+G L + L F Q G V+ V+ D +T RSRGFGFVT Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 44.7 bits (104), Expect = 5e-05 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 K+FVG L + FEQ G V+ +++D+ T R RGFGFVT S + V E Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168 Score = 39.7 bits (91), Expect = 0.002 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 249 K+F+G L + L F Q G V+ V+ D +T RSRGFGFVT Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 44.7 bits (104), Expect = 5e-05 Identities = 23/76 (30%), Positives = 37/76 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V LP +L+ F Q G ++ V + ++ TG SR +GF+ + E+ A E Sbjct: 93 IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESM 152 Query: 292 NGYTFQGRPLRVNSGP 339 N Y G L+V P Sbjct: 153 NNYLLMGHLLQVRVLP 168
>PPIE_DROME (Q9V3G3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 300 Score = 44.7 bits (104), Expect = 5e-05 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG L V L F G + +++ D + R RGF F+ E+ AAA++ Sbjct: 8 IYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNM 67 Query: 292 NGYTFQGRPLRVNSGPP--PPRDEFAP 366 N GR +RVN P D F P Sbjct: 68 NDSELCGRTIRVNLAKPVRVKEDSFKP 94
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 44.7 bits (104), Expect = 5e-05 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FV NL + ++L +F G +E + V +D S+GF +V + A Sbjct: 296 RLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRN 355 Query: 289 FNGYTFQGRPLRV 327 +G FQGR L + Sbjct: 356 LDGKIFQGRLLHI 368 Score = 34.3 bits (77), Expect = 0.072 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVV--YDRMTGRSRGFGFVTMGSVEEVAAAV 282 K+ + NLPF + LF G + V V +DR +RGFGF S E A+ Sbjct: 698 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRS---ARGFGFADFVSAREAENAM 754 Query: 283 EQFNGYTFQGRPL 321 + GR L Sbjct: 755 DALKNTHLLGRRL 767
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 44.7 bits (104), Expect = 5e-05 Identities = 28/84 (33%), Positives = 43/84 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NLP ++D +L + + G V V+ D +G SRG GF M S E+ A + F Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRVLRDS-SGASRGVGFARMESTEKCEAVIGHF 201 Query: 292 NGYTFQGRPLRVNSGPPPPRDEFA 363 NG F P V++ P +FA Sbjct: 202 NG-KFIKTPPGVSAPTEPLLCKFA 224
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 44.3 bits (103), Expect = 7e-05 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V NLP T+ QL +F + G + ++ D++TG+ RG FV EE A+ Sbjct: 198 LYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 257 Query: 292 NGYTFQG--RPLRV 327 N +G +PL V Sbjct: 258 NNVIPEGASQPLTV 271
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 44.3 bits (103), Expect = 7e-05 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVGN+ V Q+ F+ G ++ + ++YDR TG +G+G++ S A+ Q Sbjct: 66 IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKAL-QL 124 Query: 292 NGYTFQGRPLRVN 330 NG +G+ + V+ Sbjct: 125 NGGELKGKKIAVS 137
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 44.3 bits (103), Expect = 7e-05 Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V NLP T+ +L +F + G++ ++ D++TG+ RG FV EE A+ Sbjct: 173 LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISAL 232 Query: 292 NGYTFQG--RPLRV 327 N +G +PL V Sbjct: 233 NNVIPEGASQPLTV 246
>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2) Length = 406 Score = 44.3 bits (103), Expect = 7e-05 Identities = 27/84 (32%), Positives = 43/84 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NLP ++D +L + + G V ++ D +G SRG GF M S E+ A + F Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHF 201 Query: 292 NGYTFQGRPLRVNSGPPPPRDEFA 363 NG F P V++ P +FA Sbjct: 202 NG-KFIKTPPGVSAPTEPLLCKFA 224
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 44.3 bits (103), Expect = 7e-05 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Frame = +1 Query: 118 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 297 V NL + L +FE+ G V V + DR T SRGF FV + A++ +G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 298 YTFQGRPLRV--------------NSGPPPPR 351 GR LRV GPPP R Sbjct: 77 AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 108
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 44.3 bits (103), Expect = 7e-05 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Frame = +1 Query: 118 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 297 V NL + L +FE+ G V V + DR T SRGF FV + A++ +G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 298 YTFQGRPLRV--------------NSGPPPPR 351 GR LRV GPPP R Sbjct: 77 AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 108
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 44.3 bits (103), Expect = 7e-05 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Frame = +1 Query: 118 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 297 V NL + L +FE+ G V V + DR T SRGF FV + A++ +G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 298 YTFQGRPLRV--------------NSGPPPPR 351 GR LRV GPPP R Sbjct: 77 AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 108
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 44.3 bits (103), Expect = 7e-05 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Frame = +1 Query: 118 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 297 V NL + L +FE+ G V V + DR T SRGF FV + A++ +G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 298 YTFQGRPLRV--------------NSGPPPPR 351 GR LRV GPPP R Sbjct: 77 AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 108
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 44.3 bits (103), Expect = 7e-05 Identities = 23/58 (39%), Positives = 37/58 (63%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 VFVG + ++ A++ FEQ G+V+ V+++ DR TG S+G+GFV+ +V VE Sbjct: 38 VFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIVE 94
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 44.3 bits (103), Expect = 7e-05 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Frame = +1 Query: 118 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 297 V NL + L +FE+ G V V + DR T SRGF FV + A++ +G Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77 Query: 298 YTFQGRPLRV--------------NSGPPPPR 351 GR LRV GPPP R Sbjct: 78 AVLDGRELRVQMARYGRPPDSHHSRRGPPPRR 109
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 44.3 bits (103), Expect = 7e-05 Identities = 21/64 (32%), Positives = 38/64 (59%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +VFVG +P + +L LFE+AG + + ++ D ++G++RG+ F+T E AV+ Sbjct: 166 EVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKL 225 Query: 289 FNGY 300 + Y Sbjct: 226 CDSY 229 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/80 (25%), Positives = 33/80 (41%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FV NL TV L F + G +E V+ + D + FV A+++ Sbjct: 343 LFVRNLATTVTEEILEKSFSEFGKLERVKKLKD--------YAFVHFEDRGAAVKAMDEM 394 Query: 292 NGYTFQGRPLRVNSGPPPPR 351 NG +G + + PP + Sbjct: 395 NGKEIEGEEIEIVLAKPPDK 414
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 43.9 bits (102), Expect = 9e-05 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 K+FVG L + FEQ G VE +++D+ T R RGFGFVT + + V E Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169 Score = 38.9 bits (89), Expect = 0.003 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + L F + G + V+ D T RSRGFGFVT V + Q Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 43.9 bits (102), Expect = 9e-05 Identities = 26/74 (35%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + ++V NL +D +L F G++ +V+ + GRS+GFGFV S EE AV Sbjct: 294 VNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 286 QFNGYTFQGRPLRV 327 + NG +PL V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 41.6 bits (96), Expect = 5e-04 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L V A L F AG + + V D +T RS G+ +V + A++ Sbjct: 13 LYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72 Query: 292 NGYTFQGRPLRV 327 N +GRP+R+ Sbjct: 73 NFDVIKGRPVRI 84 Score = 39.3 bits (90), Expect = 0.002 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V++ N ++ +L +F + G V+V+ D G+S+GFGFV+ E+ AV++ Sbjct: 193 VYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 292 NGYTFQGRPLRV 327 NG G+ + V Sbjct: 252 NGKDMNGKSMFV 263 Score = 37.0 bits (84), Expect = 0.011 Identities = 21/72 (29%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL ++D+ L F G++ +VV D S+G+GFV + E A+++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKM 158 Query: 292 NGYTFQGRPLRV 327 NG R + V Sbjct: 159 NGMLLNDRKVFV 170
>MRD1_ASHGO (Q75A83) Multiple RNA-binding domain-containing protein 1| Length = 838 Score = 43.9 bits (102), Expect = 9e-05 Identities = 23/73 (31%), Positives = 35/73 (47%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+ N+ + LF G +E V V D TG+S+GF +V E A A + Sbjct: 302 RLFLRNILYDATEEDFKQLFSPYGELEEVHVAVDTRTGQSKGFAYVLFKDPEHAANAYIE 361 Query: 289 FNGYTFQGRPLRV 327 + FQGR L + Sbjct: 362 LDKQIFQGRLLHI 374 Score = 35.0 bits (79), Expect = 0.042 Identities = 23/71 (32%), Positives = 31/71 (43%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ V NLPF + LF G ++ V V + +RGF FV E A++Q Sbjct: 713 KIIVKNLPFEATRKDVFELFSSFGQLKSVRVP-KKFDKSARGFAFVEFLLPSEAENAMDQ 771 Query: 289 FNGYTFQGRPL 321 G GR L Sbjct: 772 LQGVHLLGRRL 782 Score = 33.9 bits (76), Expect = 0.094 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGS--VEMVEVVYDRMTG---RSRGFGFVTMGSVEEV 270 + +FV NL F+ SAQLA F+ V V+ D S GFGF+ + E+ Sbjct: 612 VSIFVKNLNFSTTSAQLAEKFKPFSGFVVAQVKTKPDPKNSDKKLSMGFGFIEFRTKEQA 671 Query: 271 AAAVEQFNGYTFQGRPLRV 327 A + +G G +++ Sbjct: 672 GAVIAAMDGAVIDGHKIQL 690 Score = 32.3 bits (72), Expect = 0.27 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 9/72 (12%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLF----EQAG-----SVEMVEVVYDRMTGRSRGFGFVTMGSV 261 +V V LP ++ A+L F +Q G + V++V D+ +G SR F F+ S Sbjct: 3 RVIVKGLPIYLEEARLRAHFLKRLQQQGRGSEDQITDVKIVKDK-SGNSRRFAFIGYRSE 61 Query: 262 EEVAAAVEQFNG 297 ++ A+E FNG Sbjct: 62 QDAFDAIEYFNG 73
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 43.9 bits (102), Expect = 9e-05 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 K+FVG L + FEQ G VE +++D+ T R RGFGFVT + + V E Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169 Score = 38.9 bits (89), Expect = 0.003 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + L F + G + V+ D T RSRGFGFVT V + Q Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
>REFP2_MOUSE (Q9JJW6) RNA and export factor-binding protein 2| Length = 218 Score = 43.9 bits (102), Expect = 9e-05 Identities = 25/73 (34%), Positives = 38/73 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ V NL F V A + LF + G+++ V YDR +GRS G V + A++Q Sbjct: 76 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDR-SGRSLGTADVHFERRADALKAMKQ 134 Query: 289 FNGYTFQGRPLRV 327 + G GRP+ + Sbjct: 135 YKGVPLDGRPMDI 147
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 43.9 bits (102), Expect = 9e-05 Identities = 24/72 (33%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VG+L +V A L +F GSV + V D +T S G+ +V E A+EQ Sbjct: 39 LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQL 98 Query: 292 NGYTFQGRPLRV 327 N +GR R+ Sbjct: 99 NYTPIKGRLCRI 110 Score = 43.5 bits (101), Expect = 1e-04 Identities = 25/74 (33%), Positives = 39/74 (52%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 + +FV NL +VD +L F G++ +V+ G+S+GFGFV + EE A+ Sbjct: 321 VNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTE-NGKSKGFGFVCFSTPEEATKAIT 379 Query: 286 QFNGYTFQGRPLRV 327 + N G+PL V Sbjct: 380 EKNQQIVAGKPLYV 393 Score = 35.8 bits (81), Expect = 0.025 Identities = 20/72 (27%), Positives = 33/72 (45%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NL +D+ L F G + ++ D G+S+GFGFV A++ Sbjct: 127 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDAL 185 Query: 292 NGYTFQGRPLRV 327 NG G+ + V Sbjct: 186 NGMLLNGQEIYV 197 Score = 32.3 bits (72), Expect = 0.27 Identities = 21/72 (29%), Positives = 30/72 (41%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++V N+ Q LF + G + + D G+ +GFGFV E+ AVE Sbjct: 220 LYVKNINSETTDEQFQELFAKFGPIVSASLEKDA-DGKLKGFGFVNYEKHEDAVKAVEAL 278 Query: 292 NGYTFQGRPLRV 327 N G L V Sbjct: 279 NDSELNGEKLYV 290
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 43.9 bits (102), Expect = 9e-05 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTM---GSVEEV 270 KVF+G LP V L F + G V V ++YD+ +SRGFGF++ SVE V Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHV 153 Score = 38.9 bits (89), Expect = 0.003 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 1/88 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L + L+ F + G + V+ + +GRSRGFGFVT V ++ Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ- 66 Query: 289 FNG-YTFQGRPLRVNSGPPPPRDEFAPR 369 NG +T GR ++ P PR P+ Sbjct: 67 -NGPHTLDGR--TIDPKPCNPRTLQKPK 91
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 43.9 bits (102), Expect = 9e-05 Identities = 25/62 (40%), Positives = 34/62 (54%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V+V NLP + +L F + G + V+ D+ +G SR FGFV S E A AVE+ Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEKM 285 Query: 292 NG 297 NG Sbjct: 286 NG 287 Score = 43.5 bits (101), Expect = 1e-04 Identities = 29/100 (29%), Positives = 44/100 (44%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 VF+ NL ++D+ L F G++ +V D + GRS+G+GFV E AA+++ Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKL 192 Query: 292 NGYTFQGRPLRVNSGPPPPRDEFAPRTPRAMXXXXXXXSF 411 NG + + V F R RA SF Sbjct: 193 NGMLLNDKQVFVG--------HFVRRQDRARSESGAVPSF 224 Score = 43.1 bits (100), Expect = 2e-04 Identities = 24/72 (33%), Positives = 41/72 (56%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++ NL +V+ +L +F + G+V +V+ + G SRGFGFV + EE A+++ Sbjct: 330 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEM 388 Query: 292 NGYTFQGRPLRV 327 NG +PL V Sbjct: 389 NGKMIGRKPLYV 400
>NOP12_CANGA (Q6FUS6) Nucleolar protein 12| Length = 396 Score = 43.5 bits (101), Expect = 1e-04 Identities = 22/57 (38%), Positives = 30/57 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 VFVGNL F D L F GS+E V +V D T +GF +V ++ V+ A+ Sbjct: 230 VFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKGFAYVQFNELQSVSKAL 286
>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog| Length = 300 Score = 43.5 bits (101), Expect = 1e-04 Identities = 15/45 (33%), Positives = 30/45 (66%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFV 246 +F+G LP+ +D +L F + G +E + +V D++T +S+G+ F+ Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFI 153
>MRD1_YEAST (Q06106) Multiple RNA-binding domain-containing protein 1| Length = 887 Score = 43.5 bits (101), Expect = 1e-04 Identities = 23/76 (30%), Positives = 36/76 (47%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+ N+ +T LF G +E V V D TG+S+GF +V + A + Sbjct: 346 RLFLRNILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLFKDSKNAVNAYVE 405 Query: 289 FNGYTFQGRPLRVNSG 336 + FQGR L + G Sbjct: 406 LDKQIFQGRLLHILPG 421 Score = 35.8 bits (81), Expect = 0.025 Identities = 23/71 (32%), Positives = 33/71 (46%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ V NLPF + LF G ++ V V + +RGF FV +E A++Q Sbjct: 764 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVP-KKFDKSARGFAFVEFLLPKEAENAMDQ 822 Query: 289 FNGYTFQGRPL 321 +G GR L Sbjct: 823 LHGVHLLGRRL 833 Score = 31.6 bits (70), Expect = 0.47 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +1 Query: 193 VEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVNSGPPPPRDEFA-PR 369 V+++ DR G SR FGF+ + E+ AVE FNG + V+ FA PR Sbjct: 46 VKILRDR-NGESRRFGFIGYRNEEDAFDAVEYFNGSFINTSKIEVSMA-----KSFADPR 99 Query: 370 TPRAM 384 P+ M Sbjct: 100 VPQPM 104
>YHH5_YEAST (P38760) Hypothetical 75.9 kDa protein in SPO13-ARG4 intergenic| region Length = 659 Score = 43.5 bits (101), Expect = 1e-04 Identities = 21/72 (29%), Positives = 40/72 (55%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+GNL TV L +F++ S E +V D +T +S G+G++ + +A ++F Sbjct: 113 LFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKEF 172 Query: 292 NGYTFQGRPLRV 327 N F G+ +++ Sbjct: 173 NYTVFFGQEVKI 184
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 43.5 bits (101), Expect = 1e-04 Identities = 26/78 (33%), Positives = 40/78 (51%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG + V + F Q G++ +++ D+ TG+SRGFGFVT S + V V Q Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DRVCQ 302 Query: 289 FNGYTFQGRPLRVNSGPP 342 F+ R + + P Sbjct: 303 NKFIDFKDRKIEIKRAEP 320 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTM---GSVEEVAAA 279 K+F+G L + L F + G+V ++++ D TGRSRGFGF++ SV+EV Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219 Query: 280 VEQFNG 297 +G Sbjct: 220 QHILDG 225
>RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 266 Score = 43.1 bits (100), Expect = 2e-04 Identities = 26/72 (36%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVGNL V L LF QAG V V++ D+ G+ + F FV V A+ Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYAMNLL 70 Query: 292 NGYTFQGRPLRV 327 NG GRP+++ Sbjct: 71 NGIKLYGRPIKI 82
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 43.1 bits (100), Expect = 2e-04 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+ N+ ++ LF G ++ V V D TG S+GF +V EE A + Sbjct: 326 RLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIE 385 Query: 289 FNGYTFQGRPLRV 327 + FQGR L + Sbjct: 386 LDKQIFQGRLLHI 398 Score = 35.8 bits (81), Expect = 0.025 Identities = 23/71 (32%), Positives = 32/71 (45%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ V NLPF + LF G ++ V V + +RGF FV +E A++Q Sbjct: 739 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVP-KKFDKSARGFAFVEFVLPKEAENAMDQ 797 Query: 289 FNGYTFQGRPL 321 G GR L Sbjct: 798 LQGVHLLGRRL 808
>PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppressor 4)| Length = 611 Score = 43.1 bits (100), Expect = 2e-04 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+G+L TV L G+F++ S +V D +T +S G G++ EE A+E+ Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152 Query: 292 NGYTFQGRPLRV 327 N G+ +R+ Sbjct: 153 NYTKVNGKEIRI 164 Score = 30.8 bits (68), Expect = 0.80 Identities = 16/72 (22%), Positives = 34/72 (47%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +F+ NLP + F + G ++ + + T + FVT + + A++++ Sbjct: 305 IFIKNLPTITTRDDILNFFSEVGPIKSIYL--SNATKVKYLWAFVTYKNSSDSEKAIKRY 362 Query: 292 NGYTFQGRPLRV 327 N + F+G+ L V Sbjct: 363 NNFYFRGKKLLV 374
>ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 595 Score = 43.1 bits (100), Expect = 2e-04 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+G LP + +L L E+ G + + ++ D G +RG+ FVT + +E A++Q Sbjct: 57 EIFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMD-FNGNNRGYAFVTFSNKQEAKNAIKQ 115 Query: 289 FNGYTFQ-GRPLRV 327 N Y + GR L V Sbjct: 116 LNNYEIRTGRLLGV 129 Score = 31.6 bits (70), Expect = 0.47 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFE--QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 ++V NL + + F + G+VE V+ + D + FV + E+ A++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 286 QFNGYTFQGRPLRVNSGPPPPRDEFAPRT 372 NG G P+ V P +D + T Sbjct: 285 ALNGKVLDGSPIEVTLAKPVDKDSYVRYT 313
>ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 43.1 bits (100), Expect = 2e-04 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+G LP + +L L E+ G + + ++ D G +RG+ FVT + +E A++Q Sbjct: 57 EIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKQEAKNAIKQ 115 Query: 289 FNGYTFQ-GRPLRV 327 N Y + GR L V Sbjct: 116 LNNYEIRNGRLLGV 129 Score = 31.6 bits (70), Expect = 0.47 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFE--QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 ++V NL + + F + G+VE V+ + D + FV + E+ A++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 286 QFNGYTFQGRPLRVNSGPPPPRDEFAPRT 372 NG G P+ V P +D + T Sbjct: 285 ALNGKVLDGSPIEVTLAKPVDKDSYVRYT 313
>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I| Length = 219 Score = 43.1 bits (100), Expect = 2e-04 Identities = 25/74 (33%), Positives = 41/74 (55%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++FVGNL V+ L F + S+ +VV DR G++RGFGFV+ ++ A + Sbjct: 31 RLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDR-EGKTRGFGFVSFKDSDQFLKAWRE 89 Query: 289 FNGYTFQGRPLRVN 330 NG RP++++ Sbjct: 90 KNGKYIGSRPVKLS 103
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 43.1 bits (100), Expect = 2e-04 Identities = 23/70 (32%), Positives = 37/70 (52%) Frame = +1 Query: 118 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 297 V NLP ++ +L LF + G V + + D++TG +GF FVT S ++ A A+ + N Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239 Query: 298 YTFQGRPLRV 327 L+V Sbjct: 240 IRMYHMVLKV 249
>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma| breakpoint region 1 protein) Length = 656 Score = 42.7 bits (99), Expect = 2e-04 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 13/104 (12%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEM--------VEVVYDRMTGRSRGFGFVTMGSVEE 267 ++V L +V LA F+Q G V+M + + D+ TG+ +G V+ Sbjct: 363 IYVQGLNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 422 Query: 268 VAAAVEQFNGYTFQGRPLRVNSGPPPP-----RDEFAPRTPRAM 384 AAVE F+G FQG L+V+ P R PR R M Sbjct: 423 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREGRGM 466
>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly| U-binding splicing factor) (Protein half pint) (PUF60 homolog) Length = 637 Score = 42.7 bits (99), Expect = 2e-04 Identities = 21/73 (28%), Positives = 38/73 (52%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +V+VG++ F + + F G ++ + + +D +T + +GF FV E A+EQ Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190 Query: 289 FNGYTFQGRPLRV 327 NG GR ++V Sbjct: 191 MNGALMGGRNIKV 203 Score = 33.9 bits (76), Expect = 0.094 Identities = 18/92 (19%), Positives = 38/92 (41%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 +++V ++ + + +FE G + ++ +G+GF+ + + + A+ Sbjct: 228 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAS 287 Query: 289 FNGYTFQGRPLRVNSGPPPPRDEFAPRTPRAM 384 N + G+ LRV PP P T M Sbjct: 288 MNLFDLGGQLLRVGRSITPPNALACPTTNSTM 319
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 42.7 bits (99), Expect = 2e-04 Identities = 20/54 (37%), Positives = 29/54 (53%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV 270 K+FVG L + +L F + G +E + V D TGRSRGF F+ + E + Sbjct: 57 KLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAI 110 Score = 41.6 bits (96), Expect = 5e-04 Identities = 22/83 (26%), Positives = 41/83 (49%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L + ++ F Q G++ VE+ +D+ + +GF F+T S E+V + + Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDS-EQVVTDLLK 195 Query: 289 FNGYTFQGRPLRVNSGPPPPRDE 357 G+ + V P P ++ Sbjct: 196 TPKQKIAGKEVDVKRATPKPENQ 218
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 42.7 bits (99), Expect = 2e-04 Identities = 23/82 (28%), Positives = 37/82 (45%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 +K+FVGNL + ++ LF Q G + ++V + FGFV M S E A++ Sbjct: 2 VKIFVGNLSPNTTAEEIRSLFSQYGKISECDIV--------KNFGFVHMDSKSEADEAIQ 53 Query: 286 QFNGYTFQGRPLRVNSGPPPPR 351 + Y G + V P+ Sbjct: 54 NLHHYMLNGMAMNVEMSKGKPK 75 Score = 34.7 bits (78), Expect = 0.055 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+ VGN+ + + +L FE+ G V ++V D + FV M VE+ A+ Sbjct: 79 KLHVGNISSSCTNQELRAKFEEYGPVVECDIVKD--------YAFVHMERVEDAMEAISG 130 Query: 289 FNGYTFQGRPLRV 327 + FQG+ + V Sbjct: 131 LDNTAFQGKLMSV 143
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 42.7 bits (99), Expect = 2e-04 Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG+L ++ +F Q G VE V ++ D +SRG GFV S E AA++ Sbjct: 212 KLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYR-QSRGCGFVKYSSKETAMAAIDG 270 Query: 289 FNG-YTFQG--RPLRVNSGPP 342 NG YT +G +PL V P Sbjct: 271 LNGTYTMRGCNQPLIVRFAEP 291 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/59 (32%), Positives = 35/59 (59%) Frame = +1 Query: 106 LKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAV 282 +K+FVG++P T ++ FEQ G+V V ++ D+ TG+ +G FV + ++ A+ Sbjct: 120 VKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADRAI 178
>EWS_MOUSE (Q61545) RNA-binding protein EWS| Length = 655 Score = 42.4 bits (98), Expect = 3e-04 Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 13/104 (12%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEM--------VEVVYDRMTGRSRGFGFVTMGSVEE 267 ++V L V LA F+Q G V+M + + D+ TG+ +G V+ Sbjct: 362 IYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPT 421 Query: 268 VAAAVEQFNGYTFQGRPLRVNSGPPPP-----RDEFAPRTPRAM 384 AAVE F+G FQG L+V+ P R PR R M Sbjct: 422 AKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGMPPREGRGM 465
>MK67I_XENTR (Q6GL69) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 276 Score = 42.4 bits (98), Expect = 3e-04 Identities = 21/77 (27%), Positives = 36/77 (46%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +++G++P + QL F Q G+V + + + TG S+G+ +V E + Sbjct: 43 IYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTM 102 Query: 292 NGYTFQGRPLRVNSGPP 342 N Y F R L+ PP Sbjct: 103 NNYLFCERLLKCEFVPP 119
>RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 262 Score = 42.4 bits (98), Expect = 3e-04 Identities = 26/72 (36%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVGNL V L LF QAG V V++ D+ G+ + F FV V A+ Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYAMNLL 70 Query: 292 NGYTFQGRPLRV 327 NG GRP+++ Sbjct: 71 NGIKLFGRPIKI 82
>RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 265 Score = 42.0 bits (97), Expect = 3e-04 Identities = 26/72 (36%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 +FVGNL V L LF QAG V V++ D+ G+ + F FV V A+ Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKLKQFAFVNFKHEVSVPYAMNLL 70 Query: 292 NGYTFQGRPLRV 327 NG GRP+++ Sbjct: 71 NGIKLFGRPIKI 82
>RNP24_SCHPO (Q09100) RNA-binding protein rnp24| Length = 369 Score = 42.0 bits (97), Expect = 3e-04 Identities = 21/58 (36%), Positives = 30/58 (51%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 +FVGNL F A L F Q G + V ++ TG+ +GFGFV ++ A+E Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAME 287
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 42.0 bits (97), Expect = 3e-04 Identities = 24/83 (28%), Positives = 38/83 (45%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L D + F+ G++ + +V D+ TG+ RGF FV + V V Q Sbjct: 123 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 182 Query: 289 FNGYTFQGRPLRVNSGPPPPRDE 357 + G+ + V P D+ Sbjct: 183 -KQHQLNGKMVDVKKALPKQNDQ 204 Score = 41.2 bits (95), Expect = 6e-04 Identities = 20/47 (42%), Positives = 28/47 (59%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 249 K+F+G L + L FE+ G++ V V+ D T RSRGFGF+T Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 78
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 41.6 bits (96), Expect = 5e-04 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + L F + G V + D +TGRSRGFGFV E V ++Q Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 155 Score = 37.7 bits (86), Expect = 0.007 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L ++ F G VE +E+ D T + RGF F+T E V +E+ Sbjct: 181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 240
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 41.6 bits (96), Expect = 5e-04 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + L F + G V + D +TGRSRGFGFV E V ++Q Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Score = 37.7 bits (86), Expect = 0.007 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L ++ F G VE +E+ D T + RGF F+T E V +E+ Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 41.6 bits (96), Expect = 5e-04 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+G L + L F + G V + D +TGRSRGFGFV E V ++Q Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157 Score = 37.7 bits (86), Expect = 0.007 Identities = 20/60 (33%), Positives = 29/60 (48%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L ++ F G VE +E+ D T + RGF F+T E V +E+ Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+G LP + +L L E+ G + + ++ D G +RG+ FVT + E A++Q Sbjct: 57 EIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKVEAKNAIKQ 115 Query: 289 FNGYTFQ-GRPLRV 327 N Y + GR L V Sbjct: 116 LNNYEIRNGRLLGV 129 Score = 31.6 bits (70), Expect = 0.47 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFE--QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 ++V NL + + F + G+VE V+ + D + FV + E+ A++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 286 QFNGYTFQGRPLRVNSGPPPPRDEFAPRT 372 NG G P+ V P +D + T Sbjct: 285 ALNGKVLDGSPIEVTLAKPVDKDSYVRYT 313
>NCBP2_ASHGO (Q754W7) Nuclear cap-binding protein subunit 2| Length = 218 Score = 41.6 bits (96), Expect = 5e-04 Identities = 22/76 (28%), Positives = 37/76 (48%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VGNL F QL LF + GS+E + + DR GF F+ + +E AA++ Sbjct: 48 IYVGNLSFYTSEEQLYELFSKCGSIEKIIMGLDRFKFTPCGFCFIIYQTPQEALAALKYL 107 Query: 292 NGYTFQGRPLRVNSGP 339 + R + ++ P Sbjct: 108 SKTKLDDREITIDLDP 123
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVT 249 K+F+G L + L FEQ G + V V+ D T RSRGFGF+T Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFIT 64 Score = 37.0 bits (84), Expect = 0.011 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEV 270 K+FVG + ++ L F+Q G+V +V D+ T + RGF FV + V Sbjct: 109 KLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPV 162
>MRD1_SCHPO (O13620) Multiple RNA-binding domain-containing protein 1| Length = 833 Score = 41.6 bits (96), Expect = 5e-04 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+ NL ++ L LF G +E V + D+ T +GF ++ ++ A + Sbjct: 324 RLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLE 383 Query: 289 FNGYTFQGRPLRV 327 + FQGR L V Sbjct: 384 LDAKPFQGRLLHV 396 Score = 27.7 bits (60), Expect = 6.8 Identities = 12/34 (35%), Positives = 15/34 (44%) Frame = +1 Query: 226 SRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRV 327 S GFGFV AA+ NG+ G L + Sbjct: 664 SMGFGFVEFKDKASAVAAMHAMNGFVLDGHKLEI 697
>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)| Length = 303 Score = 41.2 bits (95), Expect = 6e-04 Identities = 22/72 (30%), Positives = 36/72 (50%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 V+VGNLP + ++ LF + G V +++ ++ R G+ FV + A+ Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDL---KVPPRPPGYAFVEFDDARDAEDAIHGR 65 Query: 292 NGYTFQGRPLRV 327 +GY F G LRV Sbjct: 66 DGYDFDGHRLRV 77
>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 41.2 bits (95), Expect = 6e-04 Identities = 19/72 (26%), Positives = 38/72 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VGN+ + + +L F GSV V ++ D+ +G +GF ++ E V ++ Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 231 Query: 292 NGYTFQGRPLRV 327 + F+GR ++V Sbjct: 232 DESLFRGRQIKV 243
>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA-binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 41.2 bits (95), Expect = 6e-04 Identities = 19/72 (26%), Positives = 38/72 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VGN+ + + +L F GSV V ++ D+ +G +GF ++ E V ++ Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 231 Query: 292 NGYTFQGRPLRV 327 + F+GR ++V Sbjct: 232 DESLFRGRQIKV 243
>ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 587 Score = 41.2 bits (95), Expect = 6e-04 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 ++F+G LP + +L L E+ G + + ++ D G +RG+ FVT + E A++Q Sbjct: 57 EIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKLEAKNAIKQ 115 Query: 289 FNGYTFQ-GRPLRV 327 N Y + GR L V Sbjct: 116 LNNYEIRNGRLLGV 129 Score = 31.6 bits (70), Expect = 0.47 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFE--QAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 ++V NL + + F + G+VE V+ + D + FV + E+ A++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 286 QFNGYTFQGRPLRVNSGPPPPRDEFAPRT 372 NG G P+ V P +D + T Sbjct: 285 ALNGKVLDGSPIEVTLAKPVDKDSYVRYT 313
>RBM14_PONPY (Q5RC41) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/73 (34%), Positives = 36/73 (49%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVGN+ S +L LFE+ G V +VV D + FV M + AA+ Q Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQ 131 Query: 289 FNGYTFQGRPLRV 327 NG +G+ + V Sbjct: 132 LNGKEVKGKRINV 144
>RBM14_MOUSE (Q8C2Q3) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/73 (34%), Positives = 36/73 (49%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVGN+ S +L LFE+ G V +VV D + FV M + AA+ Q Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQ 131 Query: 289 FNGYTFQGRPLRV 327 NG +G+ + V Sbjct: 132 LNGKEVKGKRINV 144
>RBM14_HUMAN (Q96PK6) RNA-binding protein 14 (RNA-binding motif protein 14)| (RRM-containing coactivator activator/modulator) (Synaptotagmin-interacting protein) (SYT-interacting protein) Length = 669 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/73 (34%), Positives = 36/73 (49%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVGN+ S +L LFE+ G V +VV D + FV M + AA+ Q Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQ 131 Query: 289 FNGYTFQGRPLRV 327 NG +G+ + V Sbjct: 132 LNGKEVKGKRINV 144
>RBM14_BOVIN (Q5EA36) RNA-binding protein 14 (RNA-binding motif protein 14)| Length = 669 Score = 41.2 bits (95), Expect = 6e-04 Identities = 25/73 (34%), Positives = 36/73 (49%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVGN+ S +L LFE+ G V +VV D + FV M + AA+ Q Sbjct: 80 KIFVGNVSAACTSQELRSLFERRGRVIECDVVKD--------YAFVHMEKEADAKAAIAQ 131 Query: 289 FNGYTFQGRPLRV 327 NG +G+ + V Sbjct: 132 LNGKEVKGKRINV 144
>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 301 Score = 41.2 bits (95), Expect = 6e-04 Identities = 19/72 (26%), Positives = 38/72 (52%) Frame = +1 Query: 112 VFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQF 291 ++VGN+ + + +L F GSV V ++ D+ +G +GF ++ E V ++ Sbjct: 169 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 227 Query: 292 NGYTFQGRPLRV 327 + F+GR ++V Sbjct: 228 DESLFRGRQIKV 239
>IF34_MOUSE (Q9Z1D1) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (Eif3p42) (eIF3g) Length = 320 Score = 40.8 bits (94), Expect = 8e-04 Identities = 22/75 (29%), Positives = 35/75 (46%) Frame = +1 Query: 118 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 297 V NL L LF GS+ + + D+ TG+S+GF F++ E+ A A+ +G Sbjct: 243 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSG 302 Query: 298 YTFQGRPLRVNSGPP 342 + + L V P Sbjct: 303 FGYDHLILNVEWAKP 317
>IF34_HUMAN (O75821) Eukaryotic translation initiation factor 3 subunit 4| (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g) Length = 320 Score = 40.8 bits (94), Expect = 8e-04 Identities = 22/75 (29%), Positives = 35/75 (46%) Frame = +1 Query: 118 VGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNG 297 V NL L LF GS+ + + D+ TG+S+GF F++ E+ A A+ +G Sbjct: 243 VTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAGVSG 302 Query: 298 YTFQGRPLRVNSGPP 342 + + L V P Sbjct: 303 FGYDHLILNVEWAKP 317
>SART3_MOUSE (Q9JLI8) Squamous cell carcinoma antigen recognized by T-cells 3| (SART-3) (mSART-3) (Tumor-rejection antigen SART3) Length = 962 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/81 (25%), Positives = 43/81 (53%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+F+ LPF+ +L + + G+V+ + +V +R G+ +G +V + + + AV + Sbjct: 802 KLFISGLPFSCTKEELEDICKAHGTVKDLRLVTNR-AGKPKGLAYVEYENESQASQAVMK 860 Query: 289 FNGYTFQGRPLRVNSGPPPPR 351 +G T + ++V PP R Sbjct: 861 MDGMTIRENVIKVAISNPPQR 881 Score = 36.6 bits (83), Expect = 0.015 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%) Frame = +1 Query: 112 VFVGNLPFTVD--SAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 VFV NLP++++ +L LFE G V + ++ G RG+ +V G + A+E Sbjct: 706 VFVSNLPYSIEEPEVKLRPLFEVCGEVVQIRPIFSN-RGDFRGYCYVEFGEEKSAQQALE 764 Query: 286 QFNGYTFQGRPLRVN 330 + +GRP+ V+ Sbjct: 765 -LDRKIVEGRPMFVS 778
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 40.0 bits (92), Expect = 0.001 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = +1 Query: 109 KVFVGNLPFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVEQ 288 K+FVG L + L F + G V + D TGRSRGFGF+ V ++Q Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128 Score = 35.4 bits (80), Expect = 0.032 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Frame = +1 Query: 109 KVFVGNL-PFTVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMGSVEEVAAAVE 285 K+FVG L P + ++ F + G +E +E+ D + RGF F+T E V +E Sbjct: 153 KIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 212 Query: 286 QFNGYTFQGRPLRVNSGPP 342 + +T G + P Sbjct: 213 K-KFHTVSGSKCEIKVAQP 230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,542,183 Number of Sequences: 219361 Number of extensions: 968816 Number of successful extensions: 5269 Number of sequences better than 10.0: 436 Number of HSP's better than 10.0 without gapping: 4538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5184 length of database: 80,573,946 effective HSP length: 112 effective length of database: 56,005,514 effective search space used: 1344132336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
