Clone Name | basd2d12 |
---|---|
Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118966 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 118907 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118906 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118847 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118846 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 118787 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118786 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118727 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118726 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118667 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118666 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118607 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118606 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 118547 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118546 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 118487 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 118486 cggagggacgg 118476 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96190 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 96249 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96250 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96309 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96310 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 96369 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96370 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96429 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96430 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96489 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96490 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96549 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96550 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 96609 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96610 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 96669 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 96670 cggagggacgg 96680
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118966 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 118907 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118906 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118847 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118846 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 118787 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118786 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118727 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118726 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118667 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118666 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118607 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118606 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 118547 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118546 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 118487 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 118486 cggagggacgg 118476 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96190 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 96249 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96250 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96309 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96310 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 96369 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96370 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96429 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96430 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96489 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96490 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96549 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96550 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 96609 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96610 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 96669 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 96670 cggagggacgg 96680
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118915 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 118856 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118855 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118796 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118795 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 118736 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118735 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118676 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118675 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118616 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118615 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118556 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118555 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 118496 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118495 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 118436 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 118435 cggagggacgg 118425 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96135 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 96194 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96195 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96254 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96255 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 96314 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96315 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96374 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96375 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96434 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96435 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96494 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96495 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 96554 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96555 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 96614 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 96615 cggagggacgg 96625
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508768 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 31508827 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508828 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 31508887 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508888 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 31508947 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508948 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 31509007 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509008 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 31509067 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509068 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 31509127 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509128 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 31509187 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509188 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 31509247 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 31509248 cggagggacgg 31509258 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 43 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 103 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 163 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 223 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 283 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 343 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11512958 Query: 403 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 442 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11512957 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11512918 Score = 722 bits (364), Expect = 0.0 Identities = 370/372 (99%) Strand = Plus / Minus Query: 145 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 205 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 265 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320423 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27320364 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320363 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27320304 Query: 505 acggagggacgg 516 |||||||||||| Sbjct: 27320303 acggagggacgg 27320292 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 59 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 118 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 119 taaaggaggtggggg 133 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 62 gtcgagagggaaacagcccggatcaccagctaaggccc 99 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83828 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 83769 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83768 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 83709 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83708 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 83649 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83648 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 83589 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83588 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 83529 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83528 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 83469 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83468 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 83409 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83408 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 83349 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 83348 cggagggacgg 83338
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118935 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 118876 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118875 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118816 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118815 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 118756 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118755 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118696 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118695 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118636 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118635 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118576 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118575 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 118516 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118515 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 118456 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 118455 cggagggacgg 118445 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96183 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 96242 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96243 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96302 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96303 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 96362 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96363 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96422 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96423 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96482 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96483 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96542 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96543 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 96602 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96603 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 96662 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 96663 cggagggacgg 96673
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123231 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 123290 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123291 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 123350 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123351 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 123410 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123411 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 123470 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123471 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 123530 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123531 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 123590 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123591 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 123650 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123651 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 123710 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 123711 cggagggacgg 123721 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14957 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 15016 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15017 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 15076 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15077 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 15136 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15137 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 15196 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15197 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 15256 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15257 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 15316 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15317 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 15376 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15377 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 15436 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 15437 cggagggacgg 15447
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141765 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 141824 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141825 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 141884 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141885 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 141944 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141945 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 142004 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142005 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 142064 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142065 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 142124 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142125 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 142184 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142185 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 142244 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 142245 cggagggacgg 142255
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269117 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 9269176 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269177 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9269236 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269237 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 9269296 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269297 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9269356 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269357 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9269416 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269417 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9269476 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 9269536 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269537 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 9269596 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 9269597 cggagggacgg 9269607 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228617 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 9228676 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228677 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9228736 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228737 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 9228796 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228797 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9228856 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228857 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9228916 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228917 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9228976 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228977 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 9229036 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229037 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 9229096 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 9229097 cggagggacgg 9229107 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165205 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 9165264 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165265 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9165324 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165325 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 9165384 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165385 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9165444 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165445 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9165504 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165505 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9165564 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165565 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 9165624 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165625 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 9165684 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 9165685 cggagggacgg 9165695 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057031 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 9057090 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057091 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9057150 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057151 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 9057210 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057211 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9057270 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057271 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9057330 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9057390 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 9057450 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 9057510 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 9057511 cggagggacgg 9057521
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939102 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 19939161 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939162 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 19939221 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939222 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 19939281 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939282 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 19939341 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939342 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 19939401 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939402 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 19939461 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939462 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 19939521 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939522 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 19939581 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 19939582 cggagggacgg 19939592 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276329 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 10276270 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276269 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 10276210 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276209 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 10276150 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10276149 cgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaa 10276090 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276089 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 10276030 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276029 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 10275970 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275969 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 10275910 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275909 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 10275850 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 10275849 cggagggacgg 10275839 Score = 942 bits (475), Expect = 0.0 Identities = 488/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387969 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 10388028 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388029 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 10388088 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388089 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 10388148 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388149 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 10388208 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388209 tgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 10388268 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388269 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 10388328 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10388329 aaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatca 10388388 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388389 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 10388448 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 10388449 cggagggacgg 10388459 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 199 gatcgagcgcccttgcgctgaagatgaacggggctaagc 237 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 140 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 199 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241164 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 9241105 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241104 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 9241045 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241044 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 9240985 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240984 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 9240925 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240924 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 9240865 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240864 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 9240805 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240804 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 9240745 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240744 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 9240685 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 9240684 cggagggacgg 9240674 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 87 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 140 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 141 acagccaggaggtttgcctagaagcagccaccctttaaagag 182 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 81.8 bits (41), Expect = 2e-12 Identities = 60/65 (92%), Gaps = 1/65 (1%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaac-agcccggatcaccagcta 93 ||||||||||||||||||||||||||||||||||| ||||| | ||| ||||||||||| Sbjct: 3580448 gtgagacgatgggggataagcttcatcgtcgagagagaaacaaccccaaatcaccagcta 3580389 Query: 94 aggcc 98 ||||| Sbjct: 3580388 aggcc 3580384 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 248 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 294 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 |||||||| |||| |||||||| |||| |||| | ||||||||||||||||| Sbjct: 22199029 tttcctccacaagattcgtccatggagagtgaattagggcctaagatcaggc 22198978 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 212 tgcgctgaagatgaacggggctaagcgatctgccgaagct 251 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 86 accagctaaggcccctaaatgaccgctcagtgataaagga 125 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599284 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 31599343 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599344 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 31599403 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599404 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 31599463 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599464 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 31599523 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599524 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 31599583 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599584 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 31599643 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599644 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 31599703 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599704 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 31599763 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 31599764 cggagggacgg 31599774 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 43 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 103 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 163 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 223 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 283 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 343 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11509721 Query: 403 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 442 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11509720 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11509681 Score = 722 bits (364), Expect = 0.0 Identities = 370/372 (99%) Strand = Plus / Minus Query: 145 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 205 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 265 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411746 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27411687 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411686 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27411627 Query: 505 acggagggacgg 516 |||||||||||| Sbjct: 27411626 acggagggacgg 27411615 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 59 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 118 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 119 taaaggaggtggggg 133 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 62 gtcgagagggaaacagcccggatcaccagctaaggccc 99 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46941 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 46882 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46881 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 46822 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46821 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 46762 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46761 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 46702 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46701 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 46642 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46641 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 46582 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46581 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 46522 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46521 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 46462 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 46461 cggagggacgg 46451
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52377 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 52318 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52317 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 52258 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52257 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 52198 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52197 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 52138 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52137 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 52078 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52077 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 52018 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52017 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 51958 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51957 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 51898 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 51897 cggagggacgg 51887
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 628 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 688 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 748 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 808 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 868 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 928 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 988 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 1048 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 1049 cggagggacgg 1059
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 39 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 98 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 158 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 218 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 278 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 338 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 398 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 458 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 518 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 519 cggagggacgg 529
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 823 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 883 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 943 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1003 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 1063 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1064 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1123 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1124 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1183 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1184 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 1243 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 1244 cggagggacgg 1254
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 694 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 754 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 814 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 874 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 934 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 935 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 994 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1054 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 1114 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 1115 cggagggacgg 1125
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 823 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 883 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 943 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1003 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 1063 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1064 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1123 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1124 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1183 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1184 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 1243 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 1244 cggagggacgg 1254
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950378 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 19950437 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950438 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 19950497 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950498 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 19950557 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950558 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 19950617 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950618 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 19950677 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950678 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 19950737 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950738 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 19950797 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950798 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 19950857 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 19950858 cggagggacgg 19950868 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282368 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 10282309 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282308 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 10282249 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282248 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 10282189 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10282188 cgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaa 10282129 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282128 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 10282069 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282068 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 10282009 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282008 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 10281949 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281948 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 10281889 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 10281888 cggagggacgg 10281878 Score = 942 bits (475), Expect = 0.0 Identities = 488/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394008 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 10394067 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394068 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 10394127 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394128 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 10394187 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394188 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 10394247 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394248 tgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 10394307 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394308 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 10394367 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10394368 aaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatca 10394427 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394428 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 10394487 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 10394488 cggagggacgg 10394498 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 199 gatcgagcgcccttgcgctgaagatgaacggggctaagc 237 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 140 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 199 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118909 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 118850 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118849 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118790 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118789 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 118730 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118729 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118670 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118669 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118610 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118609 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118550 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118549 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 118490 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118489 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 118430 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 118429 cggagggacgg 118419 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96130 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 96189 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96190 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 96249 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96250 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 96309 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96310 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96369 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96370 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96429 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96430 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96489 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96490 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 96549 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96550 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 96609 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 96610 cggagggacgg 96620
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119101 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 119042 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119041 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 118982 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118981 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 118922 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118921 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 118862 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118861 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 118802 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118801 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 118742 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118741 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 118682 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118681 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 118622 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 118621 cggagggacgg 118611 Score = 957 bits (483), Expect = 0.0 Identities = 490/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95793 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 95852 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95853 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 95912 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95913 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 95972 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95973 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 96032 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96033 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 96092 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96093 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 96152 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96153 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 96212 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96213 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 96272 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 96273 cggagggacgg 96283
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117882 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 117823 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117822 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 117763 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117762 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 117703 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 117702 cgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaa 117643 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117642 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 117583 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117582 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 117523 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117522 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 117463 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117462 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 117403 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 117402 cggagggacgg 117392
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43925 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 43866 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43865 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 43806 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43805 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 43746 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43745 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 43686 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 43685 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 43626 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43625 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 43566 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43565 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 43506 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43505 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 43446 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 43445 cggagggacgg 43435 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21192 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 21251 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21252 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 21311 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21312 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 21371 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21372 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 21431 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 21432 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 21491 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21492 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 21551 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21552 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 21611 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21612 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 21671 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 21672 cggagggacgg 21682
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57654 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 57595 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57594 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 57535 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57534 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 57475 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 57474 cgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaa 57415 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57414 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 57355 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57354 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 57295 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57294 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 57235 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57234 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 57175 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 57174 cggagggacgg 57164
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 496 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 436 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 376 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 316 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 315 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 256 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 196 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 136 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 76 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 75 cggagggacgg 65
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122765 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 122706 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122705 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 122646 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122645 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 122586 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122585 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 122526 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122525 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 122466 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122465 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 122406 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122405 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 122346 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122345 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 122286 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 122285 cggagggacgg 122275 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100072 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 100131 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100132 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 100191 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100192 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 100251 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100252 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 100311 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100312 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 100371 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100372 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 100431 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100432 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 100491 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100492 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 100551 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 100552 cggagggacgg 100562
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 446 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 506 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 566 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 626 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 627 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggttgacg 686 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 746 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 806 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 866 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 867 cggagggacgg 877
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123482 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 123423 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123422 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 123363 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123362 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 123303 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123302 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 123243 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 123242 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 123183 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123182 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 123123 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123122 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 123063 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123062 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 123003 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 123002 cggagggacgg 122992 Score = 950 bits (479), Expect = 0.0 Identities = 489/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100749 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 100808 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100809 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 100868 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100869 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 100928 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100929 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 100988 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100989 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 101048 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101049 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 101108 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101109 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 101168 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101169 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 101228 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 101229 cggagggacgg 101239
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 942 bits (475), Expect = 0.0 Identities = 488/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94361 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 94420 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94421 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 94480 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94481 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 94540 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94541 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 94600 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94601 tgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 94660 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94661 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 94720 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 94721 aaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatca 94780 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94781 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 94840 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 94841 cggagggacgg 94851
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 942 bits (475), Expect = 0.0 Identities = 488/491 (99%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28425 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 28484 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28485 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 28544 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28545 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 28604 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28605 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 28664 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28665 tgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 28724 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28725 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 28784 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 28785 aaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatca 28844 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28845 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 28904 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 28905 cggagggacgg 28915
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 886 bits (447), Expect = 0.0 Identities = 460/463 (99%), Gaps = 1/463 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 404 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 344 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 284 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 224 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 223 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 164 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 104 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 44 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgt 488 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 43 ggccgaaaggcgtactcgatggacaacaggtcaatattcctgt 1
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 886 bits (447), Expect = 0.0 Identities = 482/491 (98%), Gaps = 2/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122706 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 122647 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122646 accagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 122587 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 || |||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 122586 catgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-g 122528 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122527 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 122468 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122467 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 122408 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122407 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 122348 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122347 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 122288 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122287 ggccgaaaggctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 122228 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 122227 cggagggacgg 122217 Score = 886 bits (447), Expect = 0.0 Identities = 482/491 (98%), Gaps = 2/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100031 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 100090 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100091 accagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 100150 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 || |||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 100151 catgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-g 100209 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100210 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 100269 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100270 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 100329 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100330 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 100389 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100390 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 100449 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100450 ggccgaaaggctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 100509 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 100510 cggagggacgg 100520
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 886 bits (447), Expect = 0.0 Identities = 482/491 (98%), Gaps = 2/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6384 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 6443 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6444 accagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 6503 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 || |||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 6504 catgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-g 6562 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6563 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 6622 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 6623 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 6682 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6683 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 6742 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6743 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 6802 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6803 ggccgaaaggctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 6862 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 6863 cggagggacgg 6873
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 886 bits (447), Expect = 0.0 Identities = 447/447 (100%) Strand = Plus / Plus Query: 48 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 108 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 168 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 228 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 288 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 348 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 360 Query: 408 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 420 Query: 468 acaacaggtcaatattcctgtactacc 494 ||||||||||||||||||||||||||| Sbjct: 421 acaacaggtcaatattcctgtactacc 447
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 886 bits (447), Expect = 0.0 Identities = 482/491 (98%), Gaps = 2/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 1031 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 accagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 1091 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 || |||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 1092 catgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgactg-g 1150 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1210 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1211 tgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacg 1270 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1330 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1331 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1390 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 ggccgaaaggctaagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 1450 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 1451 cggagggacgg 1461
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 835 bits (421), Expect = 0.0 Identities = 460/473 (97%) Strand = Plus / Minus Query: 44 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 103 ||||||| |||||||||| || || ||||||||||||||| ||||||||||||| ||| Sbjct: 595 tgggggaaaagcttcatcatctcgaaagaaacagcccggatccccagctaaggcccttaa 536 Query: 104 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 163 ||||||||||| ||||||||||||||||||||||||| |||||| || |||||||||||| Sbjct: 535 atgaccgctcaatgataaaggaggtgggggtgcaaagccagccatgaagtttgcctagaa 476 Query: 164 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 416 Query: 224 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 356 Query: 284 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 343 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 355 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 296 Query: 344 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 236 Query: 404 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 235 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 176 Query: 464 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacgg 516 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacgg 123
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 831 bits (419), Expect = 0.0 Identities = 474/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 ggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatc 1019 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1020 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1079 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1080 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1139 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1199 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 1200 tgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacg 1259 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1260 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1319 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1320 aaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1379 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1380 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 1439 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 1440 ccgagggacgg 1450
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 831 bits (419), Expect = 0.0 Identities = 474/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132037 ggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatc 131978 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 131977 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 131918 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131917 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 131858 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131857 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 131798 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 131797 tgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacg 131738 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131737 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 131678 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131677 aaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 131618 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131617 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 131558 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 131557 ccgagggacgg 131547 Score = 831 bits (419), Expect = 0.0 Identities = 474/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104727 ggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatc 104786 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 104787 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104846 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104847 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 104906 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104907 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 104966 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 104967 tgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacg 105026 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105027 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 105086 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105087 aaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 105146 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105147 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 105206 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 105207 ccgagggacgg 105217
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 831 bits (419), Expect = 0.0 Identities = 474/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126906 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 126847 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 126846 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 126787 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 126786 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 126727 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126726 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 126667 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||| ||||| |||| || || |||| Sbjct: 126666 tgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacg 126607 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 126606 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 126547 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126546 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 126487 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 126486 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 126427 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 126426 ccgagggacgg 126416 Score = 831 bits (419), Expect = 0.0 Identities = 474/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108016 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 108075 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 108076 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 108135 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108136 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 108195 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108196 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 108255 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||| ||||| |||| || || |||| Sbjct: 108256 tgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacg 108315 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108316 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 108375 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108376 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 108435 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108436 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 108495 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 108496 ccgagggacgg 108506
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 831 bits (419), Expect = 0.0 Identities = 474/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132998 ggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatc 132939 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 132938 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 132879 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132878 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 132819 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132818 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 132759 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 132758 tgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacg 132699 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132698 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 132639 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132638 aaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 132579 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132578 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 132519 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 132518 ccgagggacgg 132508 Score = 831 bits (419), Expect = 0.0 Identities = 474/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105651 ggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccggatc 105710 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 105711 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 105770 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105771 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 105830 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105831 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 105890 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 105891 tgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacg 105950 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105951 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 106010 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106011 aaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 106070 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106071 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 106130 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 106131 ccgagggacgg 106141
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 823 bits (415), Expect = 0.0 Identities = 473/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138543 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 138484 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138483 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138424 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138423 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 138364 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 138363 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 138304 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||| |||||||| ||||| |||||| || |||| Sbjct: 138303 tgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacg 138244 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138243 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 138184 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138183 aaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 138124 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138123 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 138064 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 138063 ccgagggacgg 138053 Score = 823 bits (415), Expect = 0.0 Identities = 473/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110554 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 110613 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110614 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110673 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110674 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 110733 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 110734 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 110793 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||| |||||||| ||||| |||||| || |||| Sbjct: 110794 tgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacg 110853 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110854 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 110913 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110914 aaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 110973 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110974 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 111033 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 111034 ccgagggacgg 111044
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 823 bits (415), Expect = 0.0 Identities = 422/423 (99%), Gaps = 1/423 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 444 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 504 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 564 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 624 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 684 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 744 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 804 Query: 446 ggc 448 ||| Sbjct: 805 ggc 807
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 823 bits (415), Expect = 0.0 Identities = 473/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138748 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 138689 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138688 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138629 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138628 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 138569 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 138568 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 138509 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | |||||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||| Sbjct: 138508 tacatcggtaggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacg 138449 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138448 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 138389 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138388 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 138329 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138328 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 138269 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 138268 ccgagggacgg 138258 Score = 823 bits (415), Expect = 0.0 Identities = 473/491 (96%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110551 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 110610 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110611 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110670 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110671 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 110730 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 110731 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 110790 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | |||||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||| Sbjct: 110791 tacatcggtaggggagcgttccgccttagagggaagcacccgcgagagcaggggtggacg 110850 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110851 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 110910 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110911 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 110970 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110971 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 111030 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 111031 ccgagggacgg 111041
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 807 bits (407), Expect = 0.0 Identities = 471/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138619 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 138560 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 138559 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 138500 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138499 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 138440 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 138439 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 138380 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||| |||||| ||||| ||| || || |||| Sbjct: 138379 tgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacg 138320 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138319 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 138260 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138259 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 138200 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138199 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 138140 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 138139 ccgagggacgg 138129 Score = 807 bits (407), Expect = 0.0 Identities = 471/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 111385 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 111386 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 111445 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 111446 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 111505 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 111506 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 111565 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||| |||||| ||||| ||| || || |||| Sbjct: 111566 tgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacg 111625 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 111626 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 111685 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111686 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 111745 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 111746 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 111805 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 111806 ccgagggacgg 111816 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 415 tccacggagggtgagtcagggcct 438 |||||||||||||||||||||||| Sbjct: 144327 tccacggagggtgagtcagggcct 144304 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 415 tccacggagggtgagtcagggcct 438 |||||||||||||||||||||||| Sbjct: 105618 tccacggagggtgagtcagggcct 105641
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 807 bits (407), Expect = 0.0 Identities = 471/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141146 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 141087 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 141086 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 141027 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141026 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 140967 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 140966 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 140907 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||| |||||| ||||| ||| || || |||| Sbjct: 140906 tgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacg 140847 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140846 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 140787 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140786 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 140727 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140726 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 140667 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 140666 ccgagggacgg 140656 Score = 807 bits (407), Expect = 0.0 Identities = 471/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112511 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 112570 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 112571 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 112630 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112631 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 112690 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 112691 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 112750 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||| |||||| ||||| ||| || || |||| Sbjct: 112751 tgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacg 112810 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112811 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 112870 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112871 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 112930 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112931 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 112990 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 112991 ccgagggacgg 113001
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 807 bits (407), Expect = 0.0 Identities = 471/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133262 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 133203 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 133202 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 133143 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 133142 caggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgag 133083 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 133082 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 133023 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||| |||||| ||||| |||| || || |||| Sbjct: 133022 tgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacg 132963 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132962 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 132903 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132902 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 132843 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132842 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 132783 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 132782 ccgagggacgg 132772 Score = 807 bits (407), Expect = 0.0 Identities = 471/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104709 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 104768 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 104769 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104828 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 104829 caggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgag 104888 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104889 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 104948 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||||||||||| |||||| ||||| |||| || || |||| Sbjct: 104949 tgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacg 105008 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105009 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 105068 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105069 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 105128 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105129 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 105188 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 105189 ccgagggacgg 105199
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 803 bits (405), Expect = 0.0 Identities = 415/417 (99%), Gaps = 1/417 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 822 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 823 accagctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagc 882 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 942 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1002 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1003 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 1062 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1063 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1122 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 442 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1123 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 1179
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 799 bits (403), Expect = 0.0 Identities = 470/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130706 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 130647 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 130646 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 130587 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130586 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 130527 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 130526 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 130467 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||| Sbjct: 130466 tacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacg 130407 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 130406 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 130347 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130346 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 130287 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 130286 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 130227 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 130226 ccgagggacgg 130216 Score = 799 bits (403), Expect = 0.0 Identities = 470/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103929 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 103988 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 103989 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 104048 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104049 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 104108 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104109 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 104168 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||| Sbjct: 104169 tacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacg 104228 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104229 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 104288 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104289 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 104348 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104349 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 104408 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 104409 ccgagggacgg 104419
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 799 bits (403), Expect = 0.0 Identities = 470/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134940 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 134881 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 134880 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 134821 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134820 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 134761 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 134760 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 134701 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||| | ||| ||| | || |||| Sbjct: 134700 tgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacg 134641 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134640 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 134581 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134580 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 134521 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134520 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 134461 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 134460 ccgagggacgg 134450 Score = 799 bits (403), Expect = 0.0 Identities = 470/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106966 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 107025 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107026 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107085 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107086 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 107145 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 107146 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 107205 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||| | ||| ||| | || |||| Sbjct: 107206 tgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacg 107265 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107266 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 107325 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107326 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 107385 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107386 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 107445 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 107446 ccgagggacgg 107456
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 799 bits (403), Expect = 0.0 Identities = 470/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135219 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 135160 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 135159 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 135100 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135099 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 135040 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135039 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 134980 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||| | ||| ||| | || |||| Sbjct: 134979 tgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacg 134920 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134919 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 134860 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134859 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 134800 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134799 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 134740 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 134739 ccgagggacgg 134729 Score = 799 bits (403), Expect = 0.0 Identities = 470/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107188 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 107247 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 107248 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 107307 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107308 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 107367 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 107368 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 107427 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||| | ||| ||| | || |||| Sbjct: 107428 tgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacg 107487 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107488 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 107547 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107548 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 107607 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107608 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 107667 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 107668 ccgagggacgg 107678
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 797 bits (402), Expect = 0.0 Identities = 462/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135622 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135563 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 135562 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 135503 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135502 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 135443 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135442 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 135383 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||| | ||||| ||||| || ||||||||||||| Sbjct: 135382 aggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaag 135323 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 135322 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 135263 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135262 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 135203 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 135202 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 135143 Query: 515 gg 516 || Sbjct: 135142 gg 135141 Score = 797 bits (402), Expect = 0.0 Identities = 462/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106803 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106862 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106863 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106922 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106923 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106982 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 106983 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107042 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||| | ||||| ||||| || ||||||||||||| Sbjct: 107043 aggggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaag 107102 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107103 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107162 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107163 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107222 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 107223 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 107282 Query: 515 gg 516 || Sbjct: 107283 gg 107284
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 43 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 103 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 163 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 223 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 283 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 343 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 63530 Query: 403 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 442 |||||||||||||||||||||||||||||||||||||||| Sbjct: 63529 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 63490
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 791 bits (399), Expect = 0.0 Identities = 469/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131814 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 131755 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 131754 accagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 131695 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131694 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 131635 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131634 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 131575 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||| Sbjct: 131574 tacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacg 131515 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131514 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 131455 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131454 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 131395 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131394 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 131335 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 131334 ccgagggacgg 131324 Score = 791 bits (399), Expect = 0.0 Identities = 469/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105064 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 105123 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 105124 accagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 105183 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105184 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 105243 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105244 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 105303 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||| Sbjct: 105304 tacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacg 105363 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105364 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 105423 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105424 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 105483 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105484 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 105543 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 105544 ccgagggacgg 105554
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 791 bits (399), Expect = 0.0 Identities = 470/491 (95%), Gaps = 2/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134030 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 133971 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 133970 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 133911 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133910 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 133851 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 133850 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 133791 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||| ||||||||||||| ||||| ||| || || |||| Sbjct: 133790 tgcatcggtaggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacg 133732 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133731 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 133672 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133671 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 133612 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133611 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 133552 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 133551 ccgagggacgg 133541 Score = 791 bits (399), Expect = 0.0 Identities = 470/491 (95%), Gaps = 2/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106252 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 106311 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 106312 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 106371 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106372 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 106431 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106432 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 106491 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 ||||||||||||||||||||||| ||||||||||||| ||||| ||| || || |||| Sbjct: 106492 tgcatcggtaggggagcgttccg-cttagagggaagctcccgcgcgagcaggtgtggacg 106550 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106551 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 106610 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106611 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 106670 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106671 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 106730 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 106731 ccgagggacgg 106741
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 791 bits (399), Expect = 0.0 Identities = 469/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131807 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 131748 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 131747 accagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 131688 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131687 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 131628 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 131627 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 131568 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||| Sbjct: 131567 tacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacg 131508 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131507 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 131448 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131447 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 131388 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131387 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 131328 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 131327 ccgagggacgg 131317 Score = 791 bits (399), Expect = 0.0 Identities = 469/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105062 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 105121 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 105122 accagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagc 105181 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105182 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 105241 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 105242 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 105301 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | ||||||||||||||||||||||||||||| |||||| ||||| ||||| || |||| Sbjct: 105302 tacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacg 105361 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105362 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 105421 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105422 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 105481 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105482 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 105541 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 105542 ccgagggacgg 105552
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 783 bits (395), Expect = 0.0 Identities = 468/491 (95%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 1021 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1022 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1081 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1082 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1141 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1142 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 1201 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||| |||||||| | ||| ||| | ||| |||| Sbjct: 1202 ggcatcggtaggggagcgttccgccttagggggaagcacctgcgcgagcagcggtagacg 1261 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1262 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1321 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1322 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1381 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1382 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtc 1441 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 1442 ccgagggacgg 1452
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135330 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135271 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 135270 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 135211 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135210 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 135151 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135150 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 135091 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 135090 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 135031 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 135030 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134971 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134970 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134911 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 134910 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 134851 Query: 515 gg 516 || Sbjct: 134850 gg 134849 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107300 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107359 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107360 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107419 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107420 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107479 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 107480 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107539 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 107540 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 107599 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107600 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107659 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107660 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107719 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 107720 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 107779 Query: 515 gg 516 || Sbjct: 107780 gg 107781
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135968 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135909 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 135908 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 135849 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135848 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 135789 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135788 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 135729 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||| || ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 135728 aggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaag 135669 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 135668 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 135609 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135608 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 135549 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 135548 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 135489 Query: 515 gg 516 || Sbjct: 135488 gg 135487 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107589 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107648 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107649 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107708 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107709 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107768 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 107769 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107828 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||| || ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 107829 aggggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaag 107888 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107889 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107948 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107949 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 108008 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 108009 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 108068 Query: 515 gg 516 || Sbjct: 108069 gg 108070
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141909 gtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaa 141850 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 141849 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtt 141790 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 141789 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 141730 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 141729 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 141670 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 141669 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 141610 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 141609 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 141550 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141549 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 141490 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 141489 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 141430 Query: 515 gg 516 || Sbjct: 141429 gg 141428 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111419 gtgagacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaa 111478 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 111479 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtt 111538 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 111539 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 111598 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 111599 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 111658 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 111659 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 111718 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 111719 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 111778 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111779 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 111838 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 111839 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 111898 Query: 515 gg 516 || Sbjct: 111899 gg 111900
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2494 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 2553 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2554 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 2613 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 2614 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 2673 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2674 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 2733 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 2734 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 2793 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 2794 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 2853 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2854 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 2913 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 2914 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 2973 Query: 515 gg 516 || Sbjct: 2974 gg 2975
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134576 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134517 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134516 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134457 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134456 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134397 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134396 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134337 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134336 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134277 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134276 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134217 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134216 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134157 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134156 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134097 Query: 515 gg 516 || Sbjct: 134096 gg 134095 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106460 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106519 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106520 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106579 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106580 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106639 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106640 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106699 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106700 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106759 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106760 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106819 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106820 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 106879 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 106880 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 106939 Query: 515 gg 516 || Sbjct: 106940 gg 106941
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 781 bits (394), Expect = 0.0 Identities = 397/398 (99%) Strand = Plus / Plus Query: 119 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 179 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 239 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 299 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 359 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 300 Query: 419 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 301 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacgggtca 360 Query: 479 atattcctgtactaccccttgttggtacggagggacgg 516 |||||||||||||||||||||||||||||||||||||| Sbjct: 361 atattcctgtactaccccttgttggtacggagggacgg 398
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134711 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134652 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134651 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134592 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134591 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134532 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134531 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134472 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134471 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134412 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134411 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134352 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134351 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134292 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134291 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134232 Query: 515 gg 516 || Sbjct: 134231 gg 134230 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106632 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106691 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106692 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106751 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106752 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106811 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106812 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106871 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106872 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106931 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106932 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106991 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106992 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107051 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 107052 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 107111 Query: 515 gg 516 || Sbjct: 107112 gg 107113
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134709 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134650 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134649 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134590 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134589 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134530 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134529 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134470 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134469 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134410 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134409 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134350 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134349 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134290 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134289 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134230 Query: 515 gg 516 || Sbjct: 134229 gg 134228 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106688 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106689 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106748 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106749 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106808 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106809 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106868 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106869 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106928 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106929 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106988 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106989 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107048 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 107049 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 107108 Query: 515 gg 516 || Sbjct: 107109 gg 107110
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134621 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134562 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134561 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134502 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134501 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134442 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134441 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134382 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134381 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134322 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134321 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134262 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134261 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134202 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134201 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134142 Query: 515 gg 516 || Sbjct: 134141 gg 134140 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106507 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106566 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106567 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106626 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106627 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106686 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106687 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106746 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106747 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106806 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106807 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106866 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106867 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 106926 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 106927 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 106986 Query: 515 gg 516 || Sbjct: 106987 gg 106988
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135328 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135269 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 135268 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 135209 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135208 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 135149 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 135148 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 135089 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 135088 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 135029 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 135028 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134969 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134968 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134909 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 134908 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 134849 Query: 515 gg 516 || Sbjct: 134848 gg 134847 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107298 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107357 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107358 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107417 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107418 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107477 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 107478 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107537 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 107538 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 107597 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107598 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107657 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107658 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107717 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 107718 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 107777 Query: 515 gg 516 || Sbjct: 107778 gg 107779
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135059 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 135000 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134999 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134940 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134939 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134880 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 134879 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 134820 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134819 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134760 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134759 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134700 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134699 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134640 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 134639 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 134580 Query: 515 gg 516 || Sbjct: 134579 gg 134578 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107079 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 107138 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 107139 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 107198 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 107199 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 107258 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 107259 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 107318 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 107319 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 107378 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 107379 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 107438 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107439 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 107498 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 107499 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 107558 Query: 515 gg 516 || Sbjct: 107559 gg 107560
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134588 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 134529 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 134528 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 134469 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134468 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 134409 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 134408 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 134349 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 134348 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 134289 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 134288 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 134229 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134228 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 134169 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 134168 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 134109 Query: 515 gg 516 || Sbjct: 134108 gg 134107 Score = 781 bits (394), Expect = 0.0 Identities = 460/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106474 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 106533 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 106534 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 106593 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106594 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 106653 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 106654 gccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggt 106713 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 106714 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 106773 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 106774 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 106833 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106834 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 106893 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||||||||||| || | ||||||| Sbjct: 106894 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttagtcccgagggac 106953 Query: 515 gg 516 || Sbjct: 106954 gg 106955
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 773 bits (390), Expect = 0.0 Identities = 459/482 (95%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2739 gtgagacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaa 2798 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2799 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 2858 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| Sbjct: 2859 tgcctagaagcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctcttgc 2918 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2919 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 2978 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 2979 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 3038 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 3039 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 3098 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3099 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 3158 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 3159 gcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 3218 Query: 515 gg 516 || Sbjct: 3219 gg 3220
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 767 bits (387), Expect = 0.0 Identities = 466/491 (94%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 129569 ggtcggccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatc 129510 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 129509 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 129450 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 129449 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 129390 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 129389 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 129330 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 || ||||||||||||||||||||||||||||||||| | ||||| ||| | ||| |||| Sbjct: 129329 tgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacg 129270 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 129269 aagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcg 129210 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129209 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 129150 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 129149 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 129090 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 129089 ccgagggacgg 129079 Score = 767 bits (387), Expect = 0.0 Identities = 466/491 (94%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 102887 ggtcggccagtgagacgatgagggataagcttcatcgtcgagagggaaacagcccagatc 102946 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 102947 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 103006 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103007 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 103066 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 103067 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 103126 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 || ||||||||||||||||||||||||||||||||| | ||||| ||| | ||| |||| Sbjct: 103127 tgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacg 103186 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 103187 aagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcg 103246 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103247 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 103306 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103307 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtc 103366 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 103367 ccgagggacgg 103377
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 765 bits (386), Expect = 0.0 Identities = 459/482 (95%), Gaps = 1/482 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1067 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 1126 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1127 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1186 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1187 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1246 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1247 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 1306 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 1307 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 1366 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1367 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1426 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1427 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1486 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 || ||||||||||||||||||| |||||||||||||| |||||||||||| | ||||||| Sbjct: 1487 gc-tagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgagggac 1545 Query: 515 gg 516 || Sbjct: 1546 gg 1547
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 751 bits (379), Expect = 0.0 Identities = 471/500 (94%), Gaps = 10/500 (2%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139406 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 139347 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 139346 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 139287 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139286 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 139227 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat------- 258 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139226 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 139167 Query: 259 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc--gg 316 || |||||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 139166 gtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggc 139107 Query: 317 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 376 | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 139106 gtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 139047 Query: 377 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 436 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 139046 aatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggc 138987 Query: 437 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 138986 ctaagatcaggccgaaaggcgtagtcgatgggcaacaggtgaatattcctgtactacccc 138927 Query: 497 ttgttggtacggagggacgg 516 |||||||| | ||||||||| Sbjct: 138926 ttgttggtcccgagggacgg 138907 Score = 751 bits (379), Expect = 0.0 Identities = 471/500 (94%), Gaps = 10/500 (2%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110654 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 110713 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 110714 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 110773 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110774 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 110833 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat------- 258 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110834 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 110893 Query: 259 gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagc--gg 316 || |||||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 110894 gtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggc 110953 Query: 317 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 376 | || |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 110954 gtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 111013 Query: 377 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 436 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 111014 aatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggc 111073 Query: 437 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 111074 ctaagatcaggccgaaaggcgtagtcgatgggcaacaggtgaatattcctgtactacccc 111133 Query: 497 ttgttggtacggagggacgg 516 |||||||| | ||||||||| Sbjct: 111134 ttgttggtcccgagggacgg 111153
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 751 bits (379), Expect = 0.0 Identities = 464/491 (94%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130906 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 130847 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 130846 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaac 130787 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130786 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 130727 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 130726 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 130667 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | ||||||||||||||||||||||||||||||||| | ||||| ||| | | | |||| Sbjct: 130666 agaatcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacg 130607 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 130606 aagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcg 130547 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130546 aaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 130487 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 130486 ggccgaagggcgtagtcgatggacaacaggtgaatattcctgtactaccctttgttggtc 130427 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 130426 ccgagggacgg 130416 Score = 751 bits (379), Expect = 0.0 Identities = 464/491 (94%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104488 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 104547 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 104548 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaac 104607 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104608 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 104667 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 104668 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 104727 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 | ||||||||||||||||||||||||||||||||| | ||||| ||| | | | |||| Sbjct: 104728 agaatcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacg 104787 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| || Sbjct: 104788 aagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcg 104847 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104848 aaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 104907 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 ||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 104908 ggccgaagggcgtagtcgatggacaacaggtgaatattcctgtactaccctttgttggtc 104967 Query: 506 cggagggacgg 516 | ||||||||| Sbjct: 104968 ccgagggacgg 104978
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 747 bits (377), Expect = 0.0 Identities = 455/481 (94%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 974 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 1033 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 1034 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 1093 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1094 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1153 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1154 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 1213 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 1214 aggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaag 1273 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1274 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1333 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1393 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 1394 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 1453 Query: 515 g 515 | Sbjct: 1454 g 1454
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 741 bits (374), Expect = 0.0 Identities = 455/482 (94%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5190 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 5249 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 5250 ggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggtt 5309 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 5310 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 5369 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 5370 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggt 5429 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||||||| Sbjct: 5430 aggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaag 5489 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 5490 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 5549 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5550 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 5609 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||| Sbjct: 5610 gcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggtcccgagggac 5669 Query: 515 gg 516 || Sbjct: 5670 gg 5671
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 741 bits (374), Expect = 0.0 Identities = 455/482 (94%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 22735 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 22676 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 22675 ggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagccaggaggtt 22616 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 22615 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 22556 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 22555 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggt 22496 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||| |||| | ||||| ||| ||| | ||||||||||||| Sbjct: 22495 aggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaag 22436 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 22435 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 22376 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22375 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 22316 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||||||| Sbjct: 22315 gcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggtcccgagggac 22256 Query: 515 gg 516 || Sbjct: 22255 gg 22254
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 739 bits (373), Expect = 0.0 Identities = 454/481 (94%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 117175 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 117116 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||| |||| |||||||||| || |||||||||||||||||||||| Sbjct: 117115 ggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 117056 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 117055 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 116996 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 116995 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 116936 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 116935 aggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaag 116876 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 116875 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 116816 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116815 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 116756 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 116755 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 116696 Query: 515 g 515 | Sbjct: 116695 g 116695 Score = 739 bits (373), Expect = 0.0 Identities = 454/481 (94%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 90927 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 90986 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||| |||| |||||||||| || |||||||||||||||||||||| Sbjct: 90987 ggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 91046 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 91047 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 91106 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 91107 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 91166 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 91167 aggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaag 91226 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 91227 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 91286 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91287 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 91346 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 91347 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 91406 Query: 515 g 515 | Sbjct: 91407 g 91407
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 733 bits (370), Expect = 0.0 Identities = 454/482 (94%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 87232 gtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 87291 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 87292 ggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtt 87351 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 87352 tgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 87411 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 87412 gccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacatcggt 87471 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||| |||| |||||| | ||| ||| || || ||||||||||||| Sbjct: 87472 aggggagcgttccgcctcagagagaagcaccggcgcgagcaggtgtggacgaagcggaag 87531 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 87532 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 87591 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87592 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 87651 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 87652 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 87711 Query: 515 gg 516 || Sbjct: 87712 gg 87713
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 726 bits (366), Expect = 0.0 Identities = 453/482 (93%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 89319 gtgagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 89378 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 89379 ggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtt 89438 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||| Sbjct: 89439 tgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcgtgc 89498 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 89499 gccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 89558 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||| ||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 89559 aggggagcgttccgcctcagagggaagcaccggcgcgagcaggtgtggacgaagcggaag 89618 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 89619 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 89678 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89679 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 89738 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 89739 gcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 89798 Query: 515 gg 516 || Sbjct: 89799 gg 89800
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 722 bits (364), Expect = 0.0 Identities = 370/372 (99%) Strand = Plus / Minus Query: 145 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 205 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 265 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20630 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 20571 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20570 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 20511 Query: 505 acggagggacgg 516 |||||||||||| Sbjct: 20510 acggagggacgg 20499
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 722 bits (364), Expect = 0.0 Identities = 462/492 (93%), Gaps = 2/492 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatc-gtcgagagggaaacagcccggat 84 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 5452 ggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacagcccagat 5511 Query: 85 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 144 ||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 5512 caccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacag 5571 Query: 145 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 204 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5572 ccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcactgatcga 5631 Query: 205 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 264 |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 5632 gcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtgggatgtaaaa 5691 Query: 265 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 324 ||| ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||| Sbjct: 5692 atgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagggttggac 5751 Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5752 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 5811 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 ||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 5812 gaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggacctaagatc 5871 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 504 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 5872 aggccgaaaggcgtagtcgatggacaacaggttaatattcctgtactgccccttgttggt 5931 Query: 505 acggagggacgg 516 | ||||||||| Sbjct: 5932 cccgagggacgg 5943
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 722 bits (364), Expect = 0.0 Identities = 462/492 (93%), Gaps = 2/492 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatc-gtcgagagggaaacagcccggat 84 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 5452 ggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacagcccagat 5511 Query: 85 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 144 ||||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 5512 caccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacag 5571 Query: 145 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 204 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5572 ccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcactgatcga 5631 Query: 205 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 264 |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 5632 gcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtgggatgtaaaa 5691 Query: 265 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 324 ||| ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||| Sbjct: 5692 atgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagggttggac 5751 Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5752 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 5811 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 ||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 5812 gaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggacctaagatc 5871 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 504 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 5872 aggccgaaaggcgtagtcgatggacaacaggttaatattcctgtactgccccttgttggt 5931 Query: 505 acggagggacgg 516 | ||||||||| Sbjct: 5932 cccgagggacgg 5943
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 720 bits (363), Expect = 0.0 Identities = 454/483 (93%), Gaps = 1/483 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 974 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 1033 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 1034 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 1093 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1094 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1153 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 1154 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 1213 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||| |||||||| | ||| ||| || || ||||||||||||| Sbjct: 1214 aggggagcgttccgccttagggggaagcaccagcgcgagcaggtgtggacgaagcggaag 1273 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1274 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1333 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1393 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtacta-ccccttgttggtacggaggga 513 |||||||||||||||||||||| ||||||||||||| | |||||||||||| | |||||| Sbjct: 1394 gcgtagtcgatggacaacaggtgaatattcctgtaccacccccttgttggtcccgaggga 1453 Query: 514 cgg 516 ||| Sbjct: 1454 cgg 1456
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 714 bits (360), Expect = 0.0 Identities = 449/476 (94%), Gaps = 2/476 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatggggg-ataagcttcatcgtcgagagggaaacagcccggat 84 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1456 ggtcggccagtgagacgatggggggataagcttcatcgtcgagagggaaacagcccggat 1515 Query: 85 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 144 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1516 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacag 1575 Query: 145 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 204 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1576 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcga 1635 Query: 205 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 264 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1636 gcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaa 1695 Query: 265 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 324 | ||||||||||||||||||||| |||| |||||||| | ||| ||| | ||| Sbjct: 1696 aaacatcggtaggggagcgttccgtgttagggggaagcatcggcgcgagccatgccagac 1755 Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1756 gaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1815 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1816 gaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 1875 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgt 500 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1876 aggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgt 1931
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 704 bits (355), Expect = 0.0 Identities = 453/483 (93%), Gaps = 2/483 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 987 gtgagacgatgggggataagcttcatcgtcgagagggaaacagccctgatcacccgctaa 1046 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1047 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1106 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1107 tgc-tataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1165 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| Sbjct: 1166 gccgaagatgaacggggctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggt 1225 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||| ||||| |||||||| | ||| ||| | ||| ||||||||||||| Sbjct: 1226 aggggagcgttccgtcttagggggaagcacctgcgcgagcagtggtagacgaagcggaag 1285 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1286 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1345 Query: 395 ggtttcctccgcaaggttcgtccacgg-agggtgagtcagggcctaagatcaggccgaaa 453 || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1346 gggttcctccgcaaggttcgtccacggtagggtgagtcagggcctaagatcaggccgaaa 1405 Query: 454 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 513 ||||||||||||||||||||||| |||||||||||||| |||||||||||| | |||||| Sbjct: 1406 ggcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccgaggga 1465 Query: 514 cgg 516 ||| Sbjct: 1466 cgg 1468
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 702 bits (354), Expect = 0.0 Identities = 450/482 (93%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 4867 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 4926 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 4927 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 4986 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 4987 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 5046 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 5047 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 5106 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 5107 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 5166 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 5167 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 5226 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5227 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 5286 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 5287 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 5346 Query: 515 gg 516 || Sbjct: 5347 gg 5348
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 702 bits (354), Expect = 0.0 Identities = 361/362 (99%), Gaps = 1/362 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526600 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 33526659 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526660 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 33526719 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526720 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 33526779 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526780 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 33526839 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526840 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 33526899 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526900 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 33526959 Query: 386 aa 387 || Sbjct: 33526960 aa 33526961 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 52 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 111 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 112 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 171 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 172 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 232 ctaagcgatctgccgaagctgtgggatgtcaaaat 266 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 141 bits (71), Expect = 3e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 272 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 331 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 332 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 391 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 392 caaggtttcctccgcaaggttcgtcca 418 || |||||||||||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 199 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 240 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 268 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 327 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 328 gcggaagcgagaatgtcggcttgagtaac 356 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 348 ttgagtaacgaaaacattggtgagaatc 375 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gatcaggccgaaaggcgtag 460 |||||||||||||||||||| Sbjct: 41814858 gatcaggccgaaaggcgtag 41814877
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 702 bits (354), Expect = 0.0 Identities = 361/362 (99%), Gaps = 1/362 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71797 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 71856 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71857 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 71916 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71917 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 71976 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71977 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 72036 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72037 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 72096 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72097 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 72156 Query: 386 aa 387 || Sbjct: 72157 aa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 348 ttgagtaacgaaaacattggtgagaatc 375 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 702 bits (354), Expect = 0.0 Identities = 450/482 (93%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 977 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 1036 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 1037 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 1096 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1097 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1156 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 1157 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 1216 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 1217 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 1276 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1277 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1336 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1337 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1396 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 1397 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 1456 Query: 515 gg 516 || Sbjct: 1457 gg 1458
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 702 bits (354), Expect = 0.0 Identities = 450/482 (93%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 150268 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 150209 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 150208 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 150149 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 150148 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 150089 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 150088 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 150029 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 150028 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 149969 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 149968 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 149909 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149908 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 149849 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 149848 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 149789 Query: 515 gg 516 || Sbjct: 149788 gg 149787 Score = 702 bits (354), Expect = 0.0 Identities = 450/482 (93%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 118398 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 118457 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 118458 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 118517 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 118518 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 118577 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 118578 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 118637 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 118638 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 118697 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 118698 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 118757 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118758 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 118817 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 118818 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 118877 Query: 515 gg 516 || Sbjct: 118878 gg 118879
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 702 bits (354), Expect = 0.0 Identities = 450/482 (93%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 977 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 1036 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 1037 ggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagccaggaggtt 1096 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1097 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1156 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 1157 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggt 1216 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||||||||||||| Sbjct: 1217 aggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaag 1276 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1277 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1336 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1337 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1396 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| ||||||||||||||| || | |||||| | ||||||| Sbjct: 1397 gcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggtcccgagggac 1456 Query: 515 gg 516 || Sbjct: 1457 gg 1458
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 690 bits (348), Expect = 0.0 Identities = 458/492 (93%), Gaps = 2/492 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51724 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 51665 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacag 144 |||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||||| Sbjct: 51664 accagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacag 51605 Query: 145 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 204 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 51604 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcga 51545 Query: 205 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 264 |||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 51544 gcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaa 51485 Query: 265 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 324 | ||||||||||||||||||||||||||||||||||| | || ||| | ||| ||| Sbjct: 51484 agacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggac 51425 Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 51424 gaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 51365 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51364 gaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 51305 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 504 |||||||||||||||||| ||||||||||||| |||||||||||||||||||| | |||| Sbjct: 51304 aggccgaaaggcgtagtcaatggacaacaggtgaatattcctgtactacccctcgctggt 51245 Query: 505 acggagggacgg 516 | ||||||||| Sbjct: 51244 cccgagggacgg 51233 Score = 690 bits (348), Expect = 0.0 Identities = 458/492 (93%), Gaps = 2/492 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38104 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 38163 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacag 144 |||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||||| Sbjct: 38164 accagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacag 38223 Query: 145 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 204 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 38224 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcga 38283 Query: 205 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 264 |||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 38284 gcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaa 38343 Query: 265 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 324 | ||||||||||||||||||||||||||||||||||| | || ||| | ||| ||| Sbjct: 38344 agacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggac 38403 Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 38404 gaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 38463 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38464 gaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 38523 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 504 |||||||||||||||||| ||||||||||||| |||||||||||||||||||| | |||| Sbjct: 38524 aggccgaaaggcgtagtcaatggacaacaggtgaatattcctgtactacccctcgctggt 38583 Query: 505 acggagggacgg 516 | ||||||||| Sbjct: 38584 cccgagggacgg 38595
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 690 bits (348), Expect = 0.0 Identities = 430/455 (94%), Gaps = 3/455 (0%) Strand = Plus / Plus Query: 50 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 110 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 169 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 170 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 229 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 230 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 289 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 290 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 349 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 350 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 409 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 615 Query: 410 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 469 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 616 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaa--cgtagtcgatggac 673 Query: 470 aacaggtcaatattcctgtactaccccttgttggt 504 ||||||| |||||||||||||||||| |||||||| Sbjct: 674 aacaggtgaatattcctgtactaccctttgttggt 708
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 690 bits (348), Expect = 0.0 Identities = 458/492 (93%), Gaps = 2/492 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5032 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 5091 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgcaaagacag 144 |||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||||| Sbjct: 5092 accagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgcagagacag 5151 Query: 145 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 204 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 5152 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcga 5211 Query: 205 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 264 |||| ||||||| ||| ||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 5212 gcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaa 5271 Query: 265 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 324 | ||||||||||||||||||||||||||||||||||| | || ||| | ||| ||| Sbjct: 5272 agacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggac 5331 Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5332 gaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 5391 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5392 gaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 5451 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 504 |||||||||||||||||| ||||||||||||| |||||||||||||||||||| | |||| Sbjct: 5452 aggccgaaaggcgtagtcaatggacaacaggtgaatattcctgtactacccctcgctggt 5511 Query: 505 acggagggacgg 516 | ||||||||| Sbjct: 5512 cccgagggacgg 5523
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 684 bits (345), Expect = 0.0 Identities = 448/481 (93%), Gaps = 1/481 (0%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 115237 gtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaa 115178 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 115177 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 115118 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 115117 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 115058 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 115057 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 114998 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||| | ||||| | | || ||| || || ||||||||||||| Sbjct: 114997 aggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacgaagcggaag 114939 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 114938 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 114879 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114878 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 114819 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 114818 gcgtagtcgatggacaacaggcaaatattcctgtactaccccttgttggtcccgagggac 114759 Query: 515 g 515 | Sbjct: 114758 g 114758 Score = 684 bits (345), Expect = 0.0 Identities = 448/481 (93%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 86883 gtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaa 86942 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 86943 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 87002 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 87003 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 87062 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 87063 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 87122 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||| | ||||| | | || ||| || || ||||||||||||| Sbjct: 87123 aggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacgaagcggaag 87181 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 87182 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 87241 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87242 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 87301 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 87302 gcgtagtcgatggacaacaggcaaatattcctgtactaccccttgttggtcccgagggac 87361 Query: 515 g 515 | Sbjct: 87362 g 87362
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 678 bits (342), Expect = 0.0 Identities = 447/482 (92%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 145580 gtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 145521 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| ||| Sbjct: 145520 ggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtt 145461 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 145460 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 145401 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 145400 gccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 145341 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||| ||||||||| Sbjct: 145340 aggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaag 145281 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 145280 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 145221 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 145220 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaag 145161 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 145160 gcgtagttgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 145101 Query: 515 gg 516 || Sbjct: 145100 gg 145099 Score = 678 bits (342), Expect = 0.0 Identities = 447/482 (92%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 112882 gtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 112941 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| ||| Sbjct: 112942 ggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtt 113001 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 113002 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 113061 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 113062 gccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 113121 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | ||| ||| || || ||| ||||||||| Sbjct: 113122 aggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaag 113181 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 113182 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 113241 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 113242 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaag 113301 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 113302 gcgtagttgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggac 113361 Query: 515 gg 516 || Sbjct: 113362 gg 113363
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 678 bits (342), Expect = 0.0 Identities = 447/482 (92%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 958 gtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagctaa 1017 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||| |||| | |||||||| ||||||||||||||||||||||||| Sbjct: 1018 ggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggaggtt 1077 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1078 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1137 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1138 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 1197 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| | ||| ||| || || ||||||||||||| Sbjct: 1198 aggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcggaag 1257 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1258 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1317 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1318 gggttcctctgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccaaaag 1377 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 1378 gcgtagtcgatggacaacaggcgaatattcctgtactaccccttgttggtcccgagggac 1437 Query: 515 gg 516 || Sbjct: 1438 gg 1439
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 670 bits (338), Expect = 0.0 Identities = 446/482 (92%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| |||||||||| |||||||| ||||||| ||||| Sbjct: 978 gtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaa 1037 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||| |||| |||||||||| || |||||||||||||||||||||| Sbjct: 1038 ggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 1097 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1098 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 1157 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 1158 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggt 1217 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||| | |||||| | ||| ||| || || ||||||||||||| Sbjct: 1218 aggggagcgttccgccttagggagaagcaccagcgtgagcaggtgtggacgaagcggaag 1277 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1278 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1337 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1338 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 1397 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||||||||||||||||||||| |||||||||||||||||||||| |||| | ||||||| Sbjct: 1398 gcgtagtcgatggacaacaggcgaatattcctgtactaccccttgctggtcccgagggac 1457 Query: 515 gg 516 || Sbjct: 1458 gg 1459
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 670 bits (338), Expect = 0.0 Identities = 341/342 (99%) Strand = Plus / Plus Query: 175 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 235 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 295 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 355 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 240 Query: 415 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacag 474 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 241 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgacggacaacag 300 Query: 475 gtcaatattcctgtactaccccttgttggtacggagggacgg 516 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtcaatattcctgtactaccccttgttggtacggagggacgg 342
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 666 bits (336), Expect = 0.0 Identities = 343/344 (99%), Gaps = 1/344 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 825 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 885 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 945 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 1005 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1006 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 1065 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 369 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1066 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 1109
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 654 bits (330), Expect = 0.0 Identities = 444/482 (92%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 144902 gtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 144961 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 144962 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 145021 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 145022 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 145081 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || |||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 145082 gccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 145141 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||| ||| ||||||| | | | ||| || || ||||||||||||| Sbjct: 145142 aggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaag 145201 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 145202 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaa 145261 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 145262 gggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccgagag 145321 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||||||| |||||||||| ||| |||||||| ||||| |||||||||||| | ||||||| Sbjct: 145322 gcgtagttgatggacaacgggttaatattcccgtactgccccttgttggtcccgagggac 145381 Query: 515 gg 516 || Sbjct: 145382 gg 145383 Score = 654 bits (330), Expect = 0.0 Identities = 444/482 (92%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 87949 gtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 87890 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 87889 ggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 87830 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 87829 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 87770 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || |||||||| |||| ||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 87769 gccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggt 87710 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||| ||| ||||||| | | | ||| || || ||||||||||||| Sbjct: 87709 aggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaag 87650 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 87649 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaa 87590 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 87589 gggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccgagag 87530 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||||||| |||||||||| ||| |||||||| ||||| |||||||||||| | ||||||| Sbjct: 87529 gcgtagttgatggacaacgggttaatattcccgtactgccccttgttggtcccgagggac 87470 Query: 515 gg 516 || Sbjct: 87469 gg 87468
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 652 bits (329), Expect = 0.0 Identities = 332/333 (99%) Strand = Plus / Plus Query: 184 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 244 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 304 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 364 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 240 Query: 424 ggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 483 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggtgagtcagggcctaggatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 300 Query: 484 cctgtactaccccttgttggtacggagggacgg 516 ||||||||||||||||||||||||||||||||| Sbjct: 301 cctgtactaccccttgttggtacggagggacgg 333
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 646 bits (326), Expect = 0.0 Identities = 456/497 (91%), Gaps = 8/497 (1%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 961 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatc 1020 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||| Sbjct: 1021 accagctaaggcccctaattgatcgctcagtgataaaggaggtaggggtgcagagacagc 1080 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| Sbjct: 1081 caggaggtttgcctagaagcagccacccttgaaatagtgcgtaatagcttactgatcgag 1140 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg------ 259 ||| ||||||| |||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1141 cgctcttgcgccgaagattaacggggctaagcgatccgccgaagctgtgggatgtaaaaa 1200 Query: 260 tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggggg 319 | ||||| ||||||||||||||||||||||||||||||||||| | || ||| | || Sbjct: 1201 taaaaatacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcagcgg 1260 Query: 320 tcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaat 379 | |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1261 tggacgaaacggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaat 1320 Query: 380 gccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggccta 439 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1321 gccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggccta 1380 Query: 440 agatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttg 499 |||||||||||||| | ||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 1381 agatcaggccgaaacg-gtagtcgatgggcaacaggtgaatatttctgtactaccccttg 1439 Query: 500 ttggtacggagggacgg 516 ||||| | ||||||||| Sbjct: 1440 ttggtcccgagggacgg 1456
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 646 bits (326), Expect = 0.0 Identities = 452/488 (92%), Gaps = 12/488 (2%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 490 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| |||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 491 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcga-gacagccaggaggtt 549 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 550 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 609 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 610 gccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggt 669 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||| Sbjct: 670 aggggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaag 729 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 |||||||||| | ||||| | ||||||||||||||||||||||||||||||||| || Sbjct: 730 cgagaatgtc-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaacctaa 785 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa----ga--tcaggc 448 || ||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 786 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaaacgtgacgtca-gc 844 Query: 449 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacgg 508 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| | | Sbjct: 845 cgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttggtcccg 904 Query: 509 agggacgg 516 |||||||| Sbjct: 905 agggacgg 912
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 642 bits (324), Expect = 0.0 Identities = 386/404 (95%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 113 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 172 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 173 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 232 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 233 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 292 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc-tt 178 Query: 293 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 352 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 353 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggtt 412 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggtt 298 Query: 413 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 358 Query: 473 aggtcaatattcctgtactaccccttgttggtacggagggacgg 516 ||| ||||||||||||||||||||||||||| | ||||||||| Sbjct: 359 aggcgaatattcctgtactaccccttgttggtcccgagggacgg 402
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 640 bits (323), Expect = e-180 Identities = 393/415 (94%), Gaps = 1/415 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 1017 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1018 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagc 1077 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1078 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1137 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1138 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 1197 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||| ||||||||||||||||||||| ||||||||||||||| ||| |||| |||| Sbjct: 1198 tgcatccgtaggggagcgttccgccttaaagggaagcaaccgcgccagcaagggtggacg 1257 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||| |||||| |||||||||||| ||||||||||||||||| |||||||| Sbjct: 1258 aagcggaagcgaaaatgtccgcttgagtaacgcaaacattggtgagaatctaatgccccc 1317 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 440 |||| | |||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1318 aaaaactaagggttcctccgcaaggttcgtccacggagggtgagtcaaggcctaa 1372
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 638 bits (322), Expect = e-180 Identities = 442/482 (91%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 127468 gtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaa 127409 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||| |||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 127408 ggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 127349 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| | Sbjct: 127348 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttac 127289 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||| | ||||||||||||||| ||||||||| ||||||| Sbjct: 127288 gccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggt 127229 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||| | ||| |||||| ||| ||| || || ||||||||||||| Sbjct: 127228 aggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaag 127169 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 127168 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 127109 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127108 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 127049 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||| Sbjct: 127048 gcgtagtcgatggacaacaggtgaatattcctgtactactccttgttggtcccgagggac 126989 Query: 515 gg 516 || Sbjct: 126988 gg 126987 Score = 638 bits (322), Expect = e-180 Identities = 442/482 (91%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 95979 gtgagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaa 96038 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||| |||||||| |||||||||| || |||||||||||||||||||||| Sbjct: 96039 ggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtt 96098 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| | Sbjct: 96099 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttac 96158 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||| | ||||||||||||||| ||||||||| ||||||| Sbjct: 96159 gccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggt 96218 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||| | ||| |||||| ||| ||| || || ||||||||||||| Sbjct: 96219 aggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaag 96278 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 96279 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 96338 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96339 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 96398 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 |||||||||||||||||||||| |||||||||||||||| |||||||||| | ||||||| Sbjct: 96399 gcgtagtcgatggacaacaggtgaatattcctgtactactccttgttggtcccgagggac 96458 Query: 515 gg 516 || Sbjct: 96459 gg 96460
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 601 bits (303), Expect = e-169 Identities = 420/458 (91%), Gaps = 2/458 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| |||||| |||||||| || |||||||||| Sbjct: 957 gtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccagctaa 1016 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 1017 ggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccaggaggtt 1076 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1077 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1136 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcg 272 || ||||||||||||| ||||||| |||||||||||||||||||||| |||| ||||| Sbjct: 1137 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagacatcg 1196 Query: 273 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 332 |||||||||||||| || ||| | |||||| |||||||| | || ||||||||||| Sbjct: 1197 gtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcgga 1256 Query: 333 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 392 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1257 agtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacct 1316 Query: 393 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 452 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1317 aagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaa 1376 Query: 453 aggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||||| |||||||||||||||||| ||||||||||||| Sbjct: 1377 aggcgcagtcgatggacaacaggttaatattcctgtac 1414
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 599 bits (302), Expect = e-168 Identities = 425/465 (91%), Gaps = 2/465 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||||| Sbjct: 1075 agacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaaggc 1134 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 1135 ccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgc 1194 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1195 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1254 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggta 275 ||||||||||||| ||||||| |||||||||||||||||||||| | | ||||||||| Sbjct: 1255 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccattagggcatcggta 1314 Query: 276 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 335 |||||||||||||| | | |||||| | | | || | || || ||||||||||||| Sbjct: 1315 ggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtggacgaagcggaagt 1374 Query: 336 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 395 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1375 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1434 Query: 396 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 455 | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1435 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1494 Query: 456 cgtagtcgatggacaacaggtcaatattcctgtactaccccttgt 500 || ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1495 cgcagtcgatggacaacaggtcaagattcctgtactaccccttgt 1539
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 595 bits (300), Expect = e-167 Identities = 423/463 (91%), Gaps = 2/463 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 958 agacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggc 1017 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 1018 ccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgc 1077 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1078 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1137 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggta 275 ||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 1138 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggta 1197 Query: 276 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 335 |||||||||||||| || | |||||| | | | || | || || ||||||||||||| Sbjct: 1198 ggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagt 1257 Query: 336 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 395 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1258 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1317 Query: 396 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 455 | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1318 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1377 Query: 456 cgtagtcgatggacaacaggtcaatattcctgtactacccctt 498 || ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 1378 cgcagtcgatggacaacaggtcaagattcctgtactactcctt 1420
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 595 bits (300), Expect = e-167 Identities = 423/463 (91%), Gaps = 2/463 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 971 agacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggc 1030 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 |||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 1031 ccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgc 1090 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1091 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1150 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggta 275 ||||||||||||| ||||||| |||||||||||||||||||||| | ||||||||| Sbjct: 1151 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggta 1210 Query: 276 ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 335 |||||||||||||| || | |||||| | | | || | || || ||||||||||||| Sbjct: 1211 ggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagt 1270 Query: 336 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 395 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1271 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1330 Query: 396 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 455 | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || Sbjct: 1331 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1390 Query: 456 cgtagtcgatggacaacaggtcaatattcctgtactacccctt 498 || ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 1391 cgcagtcgatggacaacaggtcaagattcctgtactactcctt 1433
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 585 bits (295), Expect = e-164 Identities = 438/483 (90%), Gaps = 2/483 (0%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||| |||||||||||||||||| |||||| |||||||| ||| ||||| ||| Sbjct: 5593 gtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagattaccagataa 5534 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||||| ||||| || | |||||||||||||||||||||| Sbjct: 5533 ggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagccaggaggtt 5474 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct: 5473 tgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgc 5414 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 | ||||||||||||| ||||||||||||||||||||||||||| || ||| ||||||| Sbjct: 5413 accgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaaaacatcggt 5354 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||||| | |||| |||||| ||||| ||| || || ||||||||||||| Sbjct: 5353 aggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacgaagcggaag 5294 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 5293 tgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 5234 Query: 395 ggtttcctccgcaaggttcgtcc-acggagggtgagtcagggcctaagatcaggccgaaa 453 || |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 5233 gggttcctccgcaaggttcgtccaacggggggtgagtcagggcctaagatcaggccgaaa 5174 Query: 454 ggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 513 | || ||||||||||||||||| ||||||||||||||| || |||||||| | |||||| Sbjct: 5173 cg-gttgtcgatggacaacaggtgaatattcctgtactatcctttgttggtcccgaggga 5115 Query: 514 cgg 516 ||| Sbjct: 5114 cgg 5112
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 585 bits (295), Expect = e-164 Identities = 418/458 (91%), Gaps = 2/458 (0%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| |||||| |||||||| || |||||||||| Sbjct: 124308 gtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccagctaa 124249 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 124248 ggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccaggaggtt 124189 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 124188 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 124129 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gcatcg 272 || ||||||||||||| ||||||| ||||||||||||||||||||||| | ||||| Sbjct: 124128 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcg 124069 Query: 273 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 332 |||||||||||||| || ||| | |||||| |||||||| | || ||||||||||| Sbjct: 124068 gtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcgga 124009 Query: 333 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 392 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 124008 agtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacct 123949 Query: 393 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 452 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123948 aagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaa 123889 Query: 453 aggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||||| |||||||||||||||||| ||||||||||||| Sbjct: 123888 aggcgcagtcgatggacaacaggtgaatattcctgtac 123851 Score = 585 bits (295), Expect = e-164 Identities = 418/458 (91%), Gaps = 2/458 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| |||||| |||||||| || |||||||||| Sbjct: 95558 gtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccagctaa 95617 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 95618 ggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccaggaggtt 95677 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 95678 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 95737 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gcatcg 272 || ||||||||||||| ||||||| ||||||||||||||||||||||| | ||||| Sbjct: 95738 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcg 95797 Query: 273 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 332 |||||||||||||| || ||| | |||||| |||||||| | || ||||||||||| Sbjct: 95798 gtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcgga 95857 Query: 333 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 392 || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95858 agtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacct 95917 Query: 393 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 452 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95918 aagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaa 95977 Query: 453 aggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||||| |||||||||||||||||| ||||||||||||| Sbjct: 95978 aggcgcagtcgatggacaacaggtgaatattcctgtac 96015
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 577 bits (291), Expect = e-161 Identities = 438/484 (90%), Gaps = 6/484 (1%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||| |||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 138302 ggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatc 138243 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||| ||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 138242 accagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagc 138183 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 | ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| || Sbjct: 138182 cgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaag 138123 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 263 ||| | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 138122 cgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaac 138063 Query: 264 aatgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcgggggt 320 ||| |||||||||||||||||||||||| |||||||||| | ||| ||| || | Sbjct: 138062 aatacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgc 138003 Query: 321 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 380 |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 138002 ggacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatg 137943 Query: 381 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 440 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137942 ccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 137883 Query: 441 gatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgt 500 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | || Sbjct: 137882 gatcaggccgagaggcgtagtcgatggacaacaggcgaatattcctgtactacccatcgt 137823 Query: 501 tggt 504 |||| Sbjct: 137822 tggt 137819 Score = 577 bits (291), Expect = e-161 Identities = 438/484 (90%), Gaps = 6/484 (1%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||| |||||||||||||||| ||||||||||| |||||||| |||| Sbjct: 83575 ggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatc 83634 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||| ||||||||||||||| | |||||||| || ||||||||||||| Sbjct: 83635 accagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagc 83694 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 | ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||| || Sbjct: 83695 cgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaag 83754 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 263 ||| | ||||| || |||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 83755 cgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaac 83814 Query: 264 aatgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaagcgggggt 320 ||| |||||||||||||||||||||||| |||||||||| | ||| ||| || | Sbjct: 83815 aatacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgc 83874 Query: 321 cgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatg 380 |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 83875 ggacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgagaatccaatg 83934 Query: 381 ccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 440 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83935 ccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 83994 Query: 441 gatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgt 500 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | || Sbjct: 83995 gatcaggccgagaggcgtagtcgatggacaacaggcgaatattcctgtactacccatcgt 84054 Query: 501 tggt 504 |||| Sbjct: 84055 tggt 84058
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 575 bits (290), Expect = e-161 Identities = 434/482 (90%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| | |||||||||||| |||||| | ||||||||||||| ||||||||||||| Sbjct: 5006 gtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaa 5065 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| ||||| Sbjct: 5066 ggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggtt 5125 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 5126 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgc 5185 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||| Sbjct: 5186 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggt 5245 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||| ||| | |||||| | | | || | || || ||||||||||||| Sbjct: 5246 aggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaag 5305 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 5306 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 5365 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5366 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaag 5425 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||| ||||||||||||||||| ||||||||||||| ||||||| || || | ||||||| Sbjct: 5426 gcgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggac 5485 Query: 515 gg 516 || Sbjct: 5486 gg 5487
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 575 bits (290), Expect = e-161 Identities = 434/482 (90%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| | |||||||||||| |||||| | ||||||||||||| ||||||||||||| Sbjct: 973 gtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaa 1032 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| ||||| Sbjct: 1033 ggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggtt 1092 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1093 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgc 1152 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||| Sbjct: 1153 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggt 1212 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||| ||| | |||||| | | | || | || || ||||||||||||| Sbjct: 1213 aggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaag 1272 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1273 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1332 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1333 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaag 1392 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||| ||||||||||||||||| ||||||||||||| ||||||| || || | ||||||| Sbjct: 1393 gcgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggac 1452 Query: 515 gg 516 || Sbjct: 1453 gg 1454
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 567 bits (286), Expect = e-158 Identities = 433/482 (89%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| | |||||||||||| |||||| | ||||||||||||| ||||||||||||| Sbjct: 973 gtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaa 1032 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| ||||| Sbjct: 1033 ggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggtt 1092 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 1093 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgc 1152 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||| Sbjct: 1153 gccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggt 1212 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||| ||| | |||||| | | | || | || || ||||||||||||| Sbjct: 1213 aggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaag 1272 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1273 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1332 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1333 gggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaag 1392 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||| ||||||||||||||||| ||||||||||||| ||||||| || || | ||||||| Sbjct: 1393 gcgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggac 1452 Query: 515 gg 516 || Sbjct: 1453 gg 1454
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 559 bits (282), Expect = e-156 Identities = 432/482 (89%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| | |||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 968 gtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagctaa 1027 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||||||||| Sbjct: 1028 ggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggtt 1087 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || || Sbjct: 1088 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcgc 1147 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||||||||| ||| ||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1148 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcggt 1207 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||| ||| | |||||| | | | || | | || ||||||||||||| Sbjct: 1208 aggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaag 1267 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1268 cgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaacctaa 1327 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 1328 gggttcctccgcaaggttcgtccacggagggttagtcagggcctaagattaggccgaaag 1387 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggagggac 514 ||| ||||||||||||||||| ||||||||||||| ||||||| || || | ||||||| Sbjct: 1388 gcgcagtcgatggacaacaggcgaatattcctgtaccaccccttatttgtcccgagggac 1447 Query: 515 gg 516 || Sbjct: 1448 gg 1449
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 555 bits (280), Expect = e-155 Identities = 319/332 (96%) Strand = Plus / Plus Query: 185 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 244 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 245 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 304 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 305 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 364 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 365 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagg 424 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagg 994 Query: 425 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 995 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattc 1054 Query: 485 ctgtactaccccttgttggtacggagggacgg 516 |||||||||||||||||||| | ||||||||| Sbjct: 1055 ctgtactaccccttgttggtcccgagggacgg 1086
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 543 bits (274), Expect = e-151 Identities = 390/421 (92%), Gaps = 7/421 (1%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 1040 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1041 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1100 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1101 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1160 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1161 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 1220 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaac--cgcgaaagcgggggtcga 323 |||||||||||||||||||||||||||| | |||| || | |||||| |||| | || Sbjct: 1221 tgcatcggtaggggagcgttccgccttaaaaggaaacacccgcgcgaacaaggggttgga 1280 Query: 324 cgaagcgg-aagcgagaatgtcggcttgagtaacg-aaaaca-ttggtgagaatccaatg 380 |||| ||| || | ||||||||||||||||||||| |||||| |||||||||||| |||| Sbjct: 1281 cgaaacggaaaccaagaatgtcggcttgagtaacgcaaaacatttggtgagaatctaatg 1340 Query: 381 ccccgaaaacccaaggtttcctccgc-aaggttcgtccacggagggtgagtcagggccta 439 ||||||||||| || | ||||||| | |||||||||||||||||||||||||| |||||| Sbjct: 1341 ccccgaaaacctaaaggttcctccccaaaggttcgtccacggagggtgagtcaaggccta 1400 Query: 440 a 440 | Sbjct: 1401 a 1401
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 535 bits (270), Expect = e-149 Identities = 415/463 (89%), Gaps = 4/463 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||||| Sbjct: 914 gtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagctaa 973 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 974 ggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggaggtt 1033 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1034 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1093 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgcat 270 || ||||||||| ||| ||||||| |||||||||||||||||||||| | || || Sbjct: 1094 gccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagatat 1153 Query: 271 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 330 ||||||||||||||||||||||||| |||||| ||| |||| | || ||||||||| Sbjct: 1154 cggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaagcg 1213 Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1214 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1273 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 |||||| ||||||||||||| ||||||||||||||||||||||| |||||| | || || Sbjct: 1274 ccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggtgagacca 1333 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtactac 493 || || | | | |||||||||||||| ||||||||||||||| Sbjct: 1334 aatggtgcaattgatggacaacaggtttatattcctgtactac 1376
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 529 bits (267), Expect = e-147 Identities = 274/275 (99%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 644 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 704 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 764 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 765 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 824 Query: 266 tgcatcggtaggggagcgttccgccttagagggaa 300 ||||||||||||||||||||||||||||||||||| Sbjct: 825 tgcatcggtaggggagcgttccgccttagagggaa 859
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 527 bits (266), Expect = e-146 Identities = 413/462 (89%), Gaps = 5/462 (1%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| |||||||||||||||||||||| |||||| |||||||| ||||||||||||| Sbjct: 1005 gtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcaccagctaa 1064 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||| Sbjct: 1065 ggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccaggaggtt 1124 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 1125 tgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgc 1184 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||||||| |||||||||||||||||| | ||||||| Sbjct: 1185 gccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----catcggt 1239 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| |||| Sbjct: 1240 aggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagcagaag 1299 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1300 tgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 1359 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||| ||||||||||||||||| ||||||||||||| |||||||||| | ||||| Sbjct: 1360 gggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatcatactgaaag 1419 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactacccc 496 | |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 1420 gtttagttgatggacaataggttaatattcctgtactacccc 1461
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 486 bits (245), Expect = e-134 Identities = 401/453 (88%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| |||||| Sbjct: 3992 agacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggc 4051 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 |||||||| | |||| |||| |||||||||| | ||||| ||||||||||||||||||| Sbjct: 4052 ccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgc 4111 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 |||||||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 4112 ttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgcc 4171 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 277 ||||||||||||| ||||||||| ||||||| ||||||||||| || | |||||||||| Sbjct: 4172 gaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtagg 4231 Query: 278 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 337 ||||||||| || ||||| |||||| | | |||| | | || |||||||| |||| || Sbjct: 4232 ggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagcagaagtga 4291 Query: 338 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 397 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 4292 gaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaaggg 4351 Query: 398 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 457 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4352 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcg 4411 Query: 458 tagtcgatggacaacaggtcaatattcctgtac 490 | |||||||| ||| ||||||||||||||||| Sbjct: 4412 caatcgatggataactggtcaatattcctgtac 4444
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 484 bits (244), Expect = e-133 Identities = 408/462 (88%), Gaps = 3/462 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| ||| Sbjct: 919 gtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccagttaa 978 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||| |||||||||||| ||| | |||||||||||||||||||||| Sbjct: 979 ggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccaggaggtt 1038 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1039 tgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1098 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---gcatc 271 || ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| |||| Sbjct: 1099 gccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataacatc 1158 Query: 272 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 331 |||||||||||||||||| |||| |||||| ||| ||||| || ||| |||||| Sbjct: 1159 ggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaagcgg 1218 Query: 332 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 391 ||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||| Sbjct: 1219 aagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacc 1278 Query: 392 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 451 ||||| ||||| || ||||||||||| || |||||||||||| |||||| | | ||| | Sbjct: 1279 caaggattcctacggaaggttcgtccgcgtagggtgagtcagaacctaaggtaaagccaa 1338 Query: 452 aaggcgtagtcgatggacaacaggtcaatattcctgtactac 493 | ||||||||||||||| ||||||| |||||||||||||||| Sbjct: 1339 acggcgtagtcgatggataacaggttaatattcctgtactac 1380
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 478 bits (241), Expect = e-132 Identities = 407/462 (88%), Gaps = 4/462 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 955 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaa 1014 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||||||||| Sbjct: 1015 ggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggaggtt 1074 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1075 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcttgc 1134 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg----cat 270 || ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| || Sbjct: 1135 gccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggagatat 1194 Query: 271 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 330 ||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||||||| Sbjct: 1195 cggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaagcg 1254 Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1255 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 1314 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 | |||| ||||||||||||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 1315 ctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggccg 1374 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtacta 492 ||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1375 aaaggcgtattcgatggacaacaggttaatattcctgtacta 1416
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 478 bits (241), Expect = e-132 Identities = 407/462 (88%), Gaps = 4/462 (0%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 114707 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaa 114648 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||||||||| Sbjct: 114647 ggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggaggtt 114588 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 114587 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcttgc 114528 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg----cat 270 || ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| || Sbjct: 114527 gccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggagatat 114468 Query: 271 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 330 ||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||||||| Sbjct: 114467 cggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaagcg 114408 Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 114407 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 114348 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 | |||| ||||||||||||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 114347 ctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggccg 114288 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtacta 492 ||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 114287 aaaggcgtattcgatggacaacaggttaatattcctgtacta 114246 Score = 478 bits (241), Expect = e-132 Identities = 407/462 (88%), Gaps = 4/462 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 87281 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaa 87340 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||||||||| Sbjct: 87341 ggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggaggtt 87400 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 87401 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcttgc 87460 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg----cat 270 || ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| || Sbjct: 87461 gccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggagatat 87520 Query: 271 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 330 ||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||||||| Sbjct: 87521 cggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaagcg 87580 Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 87581 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 87640 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 | |||| ||||||||||||| ||||||||||||||| ||||||| |||||| |||||| Sbjct: 87641 ctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggccg 87700 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtacta 492 ||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 87701 aaaggcgtattcgatggacaacaggttaatattcctgtacta 87742
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 462 bits (233), Expect = e-127 Identities = 379/420 (90%), Gaps = 7/420 (1%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 981 ggtcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatc 1040 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1041 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagc 1100 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 || |||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 1101 caagaggtttgcctaaaagcagccacccttgaaagagtgcgtaataactcactgatcgag 1160 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1161 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 1220 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||| ||||||||||||||| ||||| ||||||||| |||| ||| |||| |||| Sbjct: 1221 tgcatccgtaggggagcgttcccccttatagggaagcacccgccccagcaagggtggacg 1280 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaaca-ttggtgagaatccaatgcccc 384 || | | | | | |||||| ||||||||| ||||| ||||||||||||||||||||| Sbjct: 1281 aaaccg-atctaaaatgtccccttgagtaaaccaaacatttggtgagaatccaatgcccc 1339 Query: 385 gaaaacccaaggtttcctccgc-aaggttcgtccacgga--gggtgagtc-agggcctaa 440 |||||| |||| ||||||| | |||||||||||||||| ||||||||| ||||||||| Sbjct: 1340 caaaacctaagggttcctccccaaaggttcgtccacggatggggtgagtcaagggcctaa 1399
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 462 bits (233), Expect = e-127 Identities = 398/453 (87%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| |||||| Sbjct: 958 agacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggc 1017 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 |||||||| | |||| |||| |||||||||| | ||||| ||||||||||||||||||| Sbjct: 1018 ccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgc 1077 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 |||||||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1078 ttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgcc 1137 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 277 ||||||||| ||| ||||||||| ||||||| ||||||||||| || | |||||||||| Sbjct: 1138 gaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtagg 1197 Query: 278 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 337 ||||||||| || |||| |||||| | | |||| | | || |||||||| |||| || Sbjct: 1198 ggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagcagaagtga 1257 Query: 338 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 397 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 1258 gaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaaggg 1317 Query: 398 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 457 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1318 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcg 1377 Query: 458 tagtcgatggacaacaggtcaatattcctgtac 490 | |||||||| ||| ||| ||||||||||||| Sbjct: 1378 caatcgatggataacgggttaatattcctgtac 1410
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 462 bits (233), Expect = e-127 Identities = 399/453 (88%), Gaps = 1/453 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| |||||| Sbjct: 958 agacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggc 1017 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 |||||||| | |||| |||| |||||||||| | ||||| ||||||||||||||||||| Sbjct: 1018 ccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgc 1077 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 |||||||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1078 ttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgcc 1137 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 277 ||||||||| ||| ||||||||| ||||||| ||||||||||| || | |||||||||| Sbjct: 1138 gaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaa-tacatcggtagg 1196 Query: 278 ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 337 ||||||||| || ||||| |||||| | | |||| | | || |||||||| |||| || Sbjct: 1197 ggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagcagaagtga 1256 Query: 338 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 397 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1257 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1316 Query: 398 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 457 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1317 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgacaggcg 1376 Query: 458 tagtcgatggacaacaggtcaatattcctgtac 490 | |||||||| ||| ||| ||||||||||||| Sbjct: 1377 caatcgatggataacgggttaatattcctgtac 1409
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 434 bits (219), Expect = e-118 Identities = 253/263 (96%), Gaps = 1/263 (0%) Strand = Plus / Minus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130830 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 130771 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 130770 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 130711 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130710 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 130651 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 130650 cgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaa 130591 Query: 266 tgcatcggtaggggagcgttccg 288 ||||||||||||||||||||| Sbjct: 130590 aacatcggtaggggagcgttccg 130568 Score = 434 bits (219), Expect = e-118 Identities = 253/263 (96%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102615 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 102674 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 102675 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 102734 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 102735 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 102794 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 102795 cgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaa 102854 Query: 266 tgcatcggtaggggagcgttccg 288 ||||||||||||||||||||| Sbjct: 102855 aacatcggtaggggagcgttccg 102877 Score = 339 bits (171), Expect = 5e-90 Identities = 189/195 (96%) Strand = Plus / Minus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130474 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 130415 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 501 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 130414 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 130355 Query: 502 ggtacggagggacgg 516 ||| | ||||||||| Sbjct: 130354 ggtcccgagggacgg 130340 Score = 339 bits (171), Expect = 5e-90 Identities = 189/195 (96%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102971 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 103030 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 501 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103031 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 103090 Query: 502 ggtacggagggacgg 516 ||| | ||||||||| Sbjct: 103091 ggtcccgagggacgg 103105
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 426 bits (215), Expect = e-116 Identities = 257/271 (94%) Strand = Plus / Plus Query: 36 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 95 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 985 tgagacgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaag 1044 Query: 96 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 155 ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 1045 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccacgaggttt 1104 Query: 156 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 215 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1105 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 1164 Query: 216 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 275 | || |||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 1165 cccaaaatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggta 1224 Query: 276 ggggagcgttccgccttagagggaagcaacc 306 ||||||||||||||| || |||||| ||||| Sbjct: 1225 ggggagcgttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 359 aaacattggtgagaatccaatgccccgaaaa 389 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 426 bits (215), Expect = e-116 Identities = 261/275 (94%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 ggtcggccagtgagacaatgggggataagcttcatcgtcgagagggaaacagcccggatc 1028 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||| Sbjct: 1029 accagctaaggcccctaaatgaccgctcaatgataaaggaggtaggggtgcacagacagc 1088 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 || |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1089 cacgaggtttgcctataagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1148 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 1149 cgctcttgcgcccaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaa 1208 Query: 266 tgcatcggtaggggagcgttccgccttagagggaa 300 |||||||||||||||||||||| |||||||||||| Sbjct: 1209 tgcatcggtaggggagcgttcccccttagagggaa 1243 Score = 77.8 bits (39), Expect = 3e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 346 gcttgagtaacgaaaacattggtgagaatccaatg-ccccgaaaacccaaggtttcctcc 404 |||||||||||| ||||| ||||||||||| |||| ||||||||| | |||| ||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccccgaaaaactaagggttcctcc 1347 Query: 405 gc-aaggttcgtccacggagggt 426 | |||||||||||||||||||| Sbjct: 1348 ccaaaggttcgtccacggagggt 1370
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 426 bits (215), Expect = e-116 Identities = 369/415 (88%), Gaps = 4/415 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 980 ggtcggccagtgagaccatgggggataagcttcatcgtccagagggaaacagcccggatc 1039 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1040 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1099 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1100 caagaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatccag 1159 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| || ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1160 cgctcttgcgcccaaaatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 1219 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 325 |||||| ||||||||||||||| ||||| |||||| || || | | | |||| ||| Sbjct: 1220 tgcatccgtaggggagcgttcccccttaaagggaaacaccccccccaacatgggtggacc 1279 Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 || ||||| | |||||||| || | ||||||| ||||||||||||||||| |||||||| Sbjct: 1280 aaacggaaaccagaatgtccgccttagtaacgcaaacattggtgagaatctaatgccccc 1339 Query: 386 -aaaacccaaggtttcctccgcaa-ggttcgtccacgga-gggtgagtcagggcc 437 |||| | || | ||||||| ||| ||||||||||| || |||||||||| |||| Sbjct: 1340 caaaaactaaaggttcctccccaaaggttcgtccaccgaggggtgagtcaaggcc 1394
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 424 bits (214), Expect = e-115 Identities = 263/278 (94%), Gaps = 1/278 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 967 ggtcggccagtgagacgatgggggataagcttcatcgtccagagggaaacagcccggatc 1026 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1027 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 1086 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1087 caggaggtttgcctaaaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1146 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| |||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 1147 cgctcttgcgccgaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaa 1206 Query: 266 tgcatcggtaggggagcgttccgccttagagggaagca 303 ||||||||||||||||||||| |||| |||||||| Sbjct: 1207 aacatcggtaggggagcgttccgtgttagggggaagca 1244
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 412 bits (208), Expect = e-112 Identities = 267/284 (94%), Gaps = 2/284 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 942 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 1001 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| Sbjct: 1002 accagctaaggcccctaaatgaccgcccagtgataaaggaggtaggggtgcagagacagc 1061 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1062 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1121 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 265 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1122 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 1181 Query: 266 tgcatcggta-ggggagcgttccgccttagagggaagcaaccgc 308 |||| ||| ||| ||||||||| |||| |||||||| |||| Sbjct: 1182 aacatccgtatgggaagcgttccgtgttagggggaagcatccgc 1225
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 408 bits (206), Expect = e-111 Identities = 228/234 (97%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 498 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 499 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 558 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 559 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 618 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 259 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatg 672
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 408 bits (206), Expect = e-111 Identities = 377/434 (86%), Gaps = 5/434 (1%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 2508 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 2567 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||| | ||| |||||||||||||||||| |||| ||||| |||||||||| Sbjct: 2568 ggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggaggtt 2627 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||| |||||||||||||||||||||||||||||| || || | | ||| Sbjct: 2628 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 2687 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| |||||| || ||||||||||||||||| ||| |||||| Sbjct: 2688 gccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatcggt 2742 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||| || ||||| |||||| ||| ||||||| || |||||||| |||| Sbjct: 2743 aggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcagaag 2802 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 2803 tgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 2862 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 ||||||||| | ||||||||||| |||||||||||||||| |||||| |||| |||| Sbjct: 2863 ggtttcctctggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaa 2922 Query: 455 gcgtagtcgatgga 468 |||||||||||||| Sbjct: 2923 gcgtagtcgatgga 2936
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 406 bits (205), Expect = e-110 Identities = 236/245 (96%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 177814 gtgagacgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaa 177873 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 177874 ggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 177933 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 177934 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 177993 Query: 215 gctgaagatgaacggggctaagcgat-ctgccgaagctgtgggatgtcaaaatgcatcgg 273 || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 177994 gccgaagatgaacggggctaagcgatcctgccgaagctgtgggatgtcaaaatacatcgg 178053 Query: 274 taggg 278 |||| Sbjct: 178054 caggg 178058 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 140 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 199 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 140 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 199 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 94 aggcccctaaatgaccgctcag 115 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 gtcgagagggaaacagcccggatc 85 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 gtcgagagggaaacagcccggatc 85 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 402 bits (203), Expect = e-109 Identities = 317/355 (89%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||| | |||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 2851 gtgagacgacgagggataagcttcatcgtcgagagggaaacaacctggatcaccagctaa 2792 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2791 ggcccctaaatgactgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtt 2732 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||| |||||||| ||| |||||||||||||||||| ||||||||| ||||| Sbjct: 2731 tgcctagaagcaaccacccttgaaaaagtgcgtaatagctcactaatcgagcgcacttgc 2672 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 | |||||||| ||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 2671 accaaagatgaattgggctaagcgatctgttgaagctatgggatgtcaaaatgcatcgat 2612 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 ||||||||||||||||||||||||||||| | || || | ||| || || ||||||| Sbjct: 2611 aggggagcgttccgccttagagggaagcacctgcacgagtagtggtggaagaggcggaag 2552 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 389 || |||||||||||| ||| | ||||||||||||||||||||||||| ||||| Sbjct: 2551 cgggaatgtcggcttttttaaggcaaacattggtgagaatccaatgccctgaaaa 2497 Score = 149 bits (75), Expect = 1e-32 Identities = 99/107 (92%) Strand = Plus / Minus Query: 398 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 457 |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 2482 ttcctccgcaaggttcatccacggagggtgagttagggcctaagattaggccgaaaggtg 2423 Query: 458 tagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 504 |||||||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 2422 tagtcgatggacaagaggtgaatattccagtactacctcttgttggt 2376
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 391 bits (197), Expect = e-105 Identities = 392/456 (85%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 189875 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 189934 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||| | ||| |||| |||||||||||| |||| ||||| |||||||||| Sbjct: 189935 ggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggaggtt 189994 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||| |||||||||||||||||||||||||||||| || || | | ||| Sbjct: 189995 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 190054 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||| || ||||||||||||||||||| || ||||||| Sbjct: 190055 gccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcggt 190112 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||| | |||| |||||| ||||||||||| || ||| || | |||| Sbjct: 190113 aggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaag 190172 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || Sbjct: 190173 tgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 190232 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||||| ||||||||||| |||||||||||||||| |||||| |||| |||| Sbjct: 190233 ggattcctccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaa 190292 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtac 490 |||||||||||||| ||||||| ||||||||||||| Sbjct: 190293 gcgtagtcgatggataacaggttaatattcctgtac 190328 Score = 391 bits (197), Expect = e-105 Identities = 392/456 (85%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 151302 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 151361 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||| | ||| |||| |||||||||||| |||| ||||| |||||||||| Sbjct: 151362 ggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggaggtt 151421 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||| |||||||||||||||||||||||||||||| || || | | ||| Sbjct: 151422 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 151481 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||| || ||||||||||||||||||| || ||||||| Sbjct: 151482 gccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcggt 151539 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||| | |||| |||||| ||||||||||| || ||| || | |||| Sbjct: 151540 aggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaag 151599 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || Sbjct: 151600 tgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 151659 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||||| ||||||||||| |||||||||||||||| |||||| |||| |||| Sbjct: 151660 ggattcctccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaa 151719 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtac 490 |||||||||||||| ||||||| ||||||||||||| Sbjct: 151720 gcgtagtcgatggataacaggttaatattcctgtac 151755
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 383 bits (193), Expect = e-103 Identities = 202/205 (98%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122236 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaa 122177 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122176 ggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtt 122117 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122116 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgc 122057 Query: 215 gctgaagatgaacggggctaagcga 239 ||||||||||||||||||||||||| Sbjct: 122056 gctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 383 bits (193), Expect = e-103 Identities = 202/205 (98%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 12824777 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaa 12824718 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 12824717 ggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtt 12824658 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12824657 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgc 12824598 Query: 215 gctgaagatgaacggggctaagcga 239 ||||||||||||||||||||||||| Sbjct: 12824597 gctgaagatgaacggggctaagcga 12824573 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 |||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 2412040 tttcctccgcaaggttcgtccacggagggtgagttagggcctaagattaggc 2412091
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 383 bits (193), Expect = e-103 Identities = 391/456 (85%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 188952 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 189011 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| |||| | || |||| |||||||||||| |||| ||||| |||||||||| Sbjct: 189012 ggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggtt 189071 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||| | |||||||||||||||||||||||||||| || || | | ||| Sbjct: 189072 tgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 189131 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||| || ||||||||||||||||||| | | ||||||| Sbjct: 189132 gccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggt 189189 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||| | |||| |||||| ||||||||||| || ||| || | |||| Sbjct: 189190 aggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaag 189249 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || Sbjct: 189250 cgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 189309 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||||| ||||||||||| ||||||||||||||||||||||| |||| |||| Sbjct: 189310 ggattcctccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaa 189369 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtac 490 |||||||||||||| ||||||| ||||||||||||| Sbjct: 189370 gcgtagtcgatggataacaggttaatattcctgtac 189405 Score = 383 bits (193), Expect = e-103 Identities = 391/456 (85%), Gaps = 2/456 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 150509 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 150568 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| |||| | || |||| |||||||||||| |||| ||||| |||||||||| Sbjct: 150569 ggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggtt 150628 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||| | |||||||||||||||||||||||||||| || || | | ||| Sbjct: 150629 tgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctgc 150688 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||| || ||||||||||||||||||| | | ||||||| Sbjct: 150689 gccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggt 150746 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||| | |||| |||||| ||||||||||| || ||| || | |||| Sbjct: 150747 aggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaag 150806 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || Sbjct: 150807 cgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaa 150866 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || |||||||| ||||||||||| ||||||||||||||||||||||| |||| |||| Sbjct: 150867 ggattcctccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaa 150926 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtac 490 |||||||||||||| ||||||| ||||||||||||| Sbjct: 150927 gcgtagtcgatggataacaggttaatattcctgtac 150962
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 381 bits (192), Expect = e-102 Identities = 214/220 (97%), Gaps = 1/220 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 514 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 515 accagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagc 574 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 575 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 634 Query: 206 cgcccttgcgctgaagatgaacggggctaagcgatctgcc 245 ||| ||||||| |||||||||||||||||||||||||||| Sbjct: 635 cgctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 371 bits (187), Expect = 2e-99 Identities = 190/191 (99%) Strand = Plus / Minus Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634429 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634428 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634369 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 5634368 cggagggacgg 5634358
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 371 bits (187), Expect = 2e-99 Identities = 190/191 (99%) Strand = Plus / Minus Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634418 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634417 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634358 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 5634357 cggagggacgg 5634347
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 371 bits (187), Expect = 2e-99 Identities = 190/191 (99%) Strand = Plus / Plus Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 18456 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 505 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18457 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 18516 Query: 506 cggagggacgg 516 ||||||||||| Sbjct: 18517 cggagggacgg 18527
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 369 bits (186), Expect = 6e-99 Identities = 380/442 (85%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||| |||||||||||||| | |||||||||| |||||||| || || | ||||| Sbjct: 945 gtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaa 1004 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||||| ||||| |||| |||||| ||||| |||| |||||||||||||||| Sbjct: 1005 ggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggtt 1064 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 1065 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgc 1124 Query: 215 gctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 273 || |||||||||||| || ||||| ||||||| || |||||||| |||| ||||||| Sbjct: 1125 gccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcatcgg 1183 Query: 274 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 333 |||||||||||||||| || ||||| |||| ||| || || ||||| |||||| Sbjct: 1184 taggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaa 1243 Query: 334 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 393 | |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 1244 gtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaaccca 1303 Query: 394 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 453 ||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| Sbjct: 1304 agggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaag 1363 Query: 454 ggcgtagtcgatggacaacagg 475 |||| || |||||||||||||| Sbjct: 1364 ggcgcagccgatggacaacagg 1385
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 369 bits (186), Expect = 6e-99 Identities = 380/442 (85%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||| |||||||||||||| | |||||||||| |||||||| || || | ||||| Sbjct: 958 gtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaa 1017 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||||| ||||| |||| |||||| ||||| |||| |||||||||||||||| Sbjct: 1018 ggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggtt 1077 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 1078 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgc 1137 Query: 215 gctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 273 || |||||||||||| || ||||| ||||||| || |||||||| |||| ||||||| Sbjct: 1138 gccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcatcgg 1196 Query: 274 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 333 |||||||||||||||| || ||||| |||| ||| || || ||||| |||||| Sbjct: 1197 taggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaa 1256 Query: 334 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 393 | |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 1257 gtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaaccca 1316 Query: 394 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 453 ||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| Sbjct: 1317 agggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaag 1376 Query: 454 ggcgtagtcgatggacaacagg 475 |||| || |||||||||||||| Sbjct: 1377 ggcgcagccgatggacaacagg 1398
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 369 bits (186), Expect = 6e-99 Identities = 380/442 (85%), Gaps = 2/442 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||||| |||||||||||||| | |||||||||| |||||||| || || | ||||| Sbjct: 5532 gtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaa 5591 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||||| ||||| |||| |||||| ||||| |||| |||||||||||||||| Sbjct: 5592 ggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggtt 5651 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 5652 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgc 5711 Query: 215 gctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 273 || |||||||||||| || ||||| ||||||| || |||||||| |||| ||||||| Sbjct: 5712 gccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcatcgg 5770 Query: 274 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 333 |||||||||||||||| || ||||| |||| ||| || || ||||| |||||| Sbjct: 5771 taggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaa 5830 Query: 334 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 393 | |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 5831 gtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaaccca 5890 Query: 394 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 453 ||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| Sbjct: 5891 agggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaag 5950 Query: 454 ggcgtagtcgatggacaacagg 475 |||| || |||||||||||||| Sbjct: 5951 ggcgcagccgatggacaacagg 5972
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 953 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1012 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1013 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1072 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1073 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1132 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1133 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1187 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1188 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1247 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1248 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1307 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1308 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1367 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1368 ttagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 953 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1012 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1013 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1072 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1073 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1132 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1133 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1187 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1188 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1247 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1248 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1307 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1308 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1367 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1368 ttagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 953 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1012 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1013 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1072 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1073 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1132 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1133 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1187 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1188 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1247 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1248 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1307 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1308 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1367 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1368 ttagctgatggacaatagattaatattcttgtactacccc 1407
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| || | | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaggtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| |||| ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaataggttaatattcttgtactacccc 1408
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 365 bits (184), Expect = 9e-98 Identities = 391/460 (85%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 357 bits (180), Expect = 2e-95 Identities = 390/460 (84%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| |||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 357 bits (180), Expect = 2e-95 Identities = 390/460 (84%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | ||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagcttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| ||||| ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 357 bits (180), Expect = 2e-95 Identities = 390/460 (84%), Gaps = 5/460 (1%) Strand = Plus / Plus Query: 37 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 96 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||| Sbjct: 954 gagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaagg 1013 Query: 97 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 156 ||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||| Sbjct: 1014 cccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttg 1073 Query: 157 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 216 |||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| || Sbjct: 1074 cctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgc 1133 Query: 217 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 276 ||| ||||||||| || || ||| ||||||| ||||||||| | |||||| || Sbjct: 1134 cgaatatgaacgggaataggcaatccaccgaagccgtgggatgtaa-----catcggcag 1188 Query: 277 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 336 |||||||||| |||||| | ||||||| | || || | ||| || ||||| |||| | Sbjct: 1189 gggagcgttctgccttataaggaagcacctgcccgagaagtggtggatgaagcagaagtg 1248 Query: 337 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 396 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1249 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1308 Query: 397 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 456 ||||| | |||||||| |||||| ||||||||||||| | |||||||| | |||||| Sbjct: 1309 attccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggt 1368 Query: 457 gtagtcgatggacaacaggtcaatattcctgtactacccc 496 ||| ||||||||| || | ||||||| ||||||||||| Sbjct: 1369 ttagctgatggacaatagattaatattcttgtactacccc 1408
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 52 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 111 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 112 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 171 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 172 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 232 ctaagcgatctgccgaagctgtgggatgtcaaaat 266 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 52 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 111 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 112 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 171 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 172 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 232 ctaagcgatctgccgaagctgtgggatgtcaaaat 266 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 349 bits (176), Expect = 6e-93 Identities = 183/184 (99%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 825 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 885 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 945 Query: 206 cgcc 209 |||| Sbjct: 946 cgcc 949
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 345 bits (174), Expect = 9e-92 Identities = 390/458 (85%), Gaps = 3/458 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccagcta 93 |||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| |||| Sbjct: 956 gtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccggcta 1015 Query: 94 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 153 |||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| |||| Sbjct: 1016 aggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaaggt 1075 Query: 154 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 213 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1076 ttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctctgg 1135 Query: 214 cgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcg 272 ||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | ||| | Sbjct: 1136 cgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattacatgg 1194 Query: 273 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 332 |||||||||||||| | |||| ||||| |||||||| | || ||| || | || Sbjct: 1195 gtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaacaga 1254 Query: 333 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 392 || |||||||||||||||||||||| |||| | ||||||||||| |||||||||||||| Sbjct: 1255 agtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaacct 1314 Query: 393 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 452 |||| ||||| || |||| ||||||||| |||||||||||||||||||||| | |||||| Sbjct: 1315 aagggttccttcggaaggctcgtccacgaagggtgagtcagggcctaagatgatgccgaa 1374 Query: 453 aggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||||||||||||||||||||||||||| |||||||||| Sbjct: 1375 aggcgtagtcgatggacaacaggtcaaaattcctgtac 1412
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 59 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 118 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 119 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 178 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 179 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 238 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 239 atctgccgaagctgtgggat 258 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 329 bits (166), Expect = 5e-87 Identities = 377/445 (84%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 47 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 106 ||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 18079 gggataagcttcaatgtcaagagggaaacagcccagattaccagttaaggcccctaaata 18020 Query: 107 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 166 | || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 18019 attactaagtgataaaggaggtgggagtgcatagacaatcaggaggtttgcctagaagca 17960 Query: 167 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 226 || | |||||||||||||||||||||||||||| ||||| || | ||||| ||| ||||| Sbjct: 17959 gcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctgcgccgaaaatgaa 17900 Query: 227 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 286 ||| ||||| || |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 17899 tgggactaagtaatttgccgaagctgtaagatgttaaaa--catcggtaggggagcgttc 17842 Query: 287 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 346 | |||| ||||| ||| ||||||| || ||| | | |||| |||||||| | Sbjct: 17841 tacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaagtgagaatgttag 17782 Query: 347 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 406 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 17781 cttgagtagcgaaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgg 17722 Query: 407 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 466 |||| |||||| |||||||||||||||| |||||| | ||| | || ||||| |||||| Sbjct: 17721 aaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaatagcgtaatcgatg 17663 Query: 467 gacaacaggtcaatattcctgtact 491 || ||||||| |||||||||||||| Sbjct: 17662 gataacaggttaatattcctgtact 17638 Score = 329 bits (166), Expect = 5e-87 Identities = 377/445 (84%), Gaps = 3/445 (0%) Strand = Plus / Plus Query: 47 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 106 ||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 2787 gggataagcttcaatgtcaagagggaaacagcccagattaccagttaaggcccctaaata 2846 Query: 107 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 166 | || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 2847 attactaagtgataaaggaggtgggagtgcatagacaatcaggaggtttgcctagaagca 2906 Query: 167 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 226 || | |||||||||||||||||||||||||||| ||||| || | ||||| ||| ||||| Sbjct: 2907 gcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctgcgccgaaaatgaa 2966 Query: 227 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 286 ||| ||||| || |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 2967 tgggactaagtaatttgccgaagctgtaagatgttaaaa--catcggtaggggagcgttc 3024 Query: 287 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 346 | |||| ||||| ||| ||||||| || ||| | | |||| |||||||| | Sbjct: 3025 tacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaagtgagaatgttag 3084 Query: 347 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 406 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3085 cttgagtagcgaaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgg 3144 Query: 407 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 466 |||| |||||| |||||||||||||||| |||||| | ||| | || ||||| |||||| Sbjct: 3145 aaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaatagcgtaatcgatg 3203 Query: 467 gacaacaggtcaatattcctgtact 491 || ||||||| |||||||||||||| Sbjct: 3204 gataacaggttaatattcctgtact 3228
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 315 bits (159), Expect = 8e-83 Identities = 376/446 (84%), Gaps = 3/446 (0%) Strand = Plus / Plus Query: 47 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 106 |||||||||||||| ||| | ||||||||||||| || |||||| |||||||||||||| Sbjct: 2654 gggataagcttcattgtcaaaagggaaacagcccagaccaccagttaaggcccctaaata 2713 Query: 107 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 166 || |||| |||||||||||| |||| ||| ||||||||||||| |||||||| Sbjct: 2714 gttactaagtggcaaaggaggtgggaatgcattaacaaccaggaggtttgcttagaagca 2773 Query: 167 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 226 || | |||||||||||||||||||||||||||| || || | | ||||| ||| ||||| Sbjct: 2774 gcaatcctttaaagagtgcgtaatagctcactggtctagtgatcctgcgccgaaaatgaa 2833 Query: 227 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 286 |||| ||||| | ||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 2834 cgggactaagtaacttgccgaatctgtgggatgttta--tgcatcggtaggggagcgttc 2891 Query: 287 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 346 || ||||| |||||| |||||| || || ||| |||| |||| ||||||||||| Sbjct: 2892 tgc-ttagattgaagcattaacgaaagtggatgtggacaaagcagaagtgagaatgtcgg 2950 Query: 347 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 406 |||||||| |||||||||||||||||||||||||||||| ||||| |||| |||||| | Sbjct: 2951 cttgagtagcgaaaacattggtgagaatccaatgccccggaaacctaaggattcctctgg 3010 Query: 407 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 466 |||| ||||||||||||||| ||||||| ||||| || ||||||||||||||| | |||| Sbjct: 3011 aaggctcgtccacggagggttagtcaggacctaaaatgaggccgaaaggcgtaattgatg 3070 Query: 467 gacaacaggtcaatattcctgtacta 492 |||||||||| ||||||||||||||| Sbjct: 3071 gacaacaggttaatattcctgtacta 3096
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 309 bits (156), Expect = 5e-81 Identities = 204/220 (92%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||||| Sbjct: 1360 gtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagctaa 1419 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| Sbjct: 1420 ggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtt 1479 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1480 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1539 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1540 gccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 269 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 328 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 ||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||| || Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacgtggggtgagtcaggacctaagatcaagc 1780 Query: 449 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 492 |||| |||| |||||||||| ||||||| || |||||||||||| Sbjct: 1781 cgaatggcgcagtcgatggataacaggt-aacattcctgtacta 1823
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 309 bits (156), Expect = 5e-81 Identities = 233/259 (89%), Gaps = 6/259 (2%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 976 gtgagaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 1035 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||| ||| ||||||||||| |||||||| ||||| |||||||||| Sbjct: 1036 ggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacaaccaggaggtt 1095 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 1096 tgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgc 1155 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||| ||| ||||||| | |||||||||||||||||| | |||||| Sbjct: 1156 gccgaatatgaatgggaataagcgacccgccgaagctgtgggatgtaa------atcggt 1209 Query: 275 aggggagcgttccgcctta 293 |||||||||||| |||||| Sbjct: 1210 aggggagcgttctgcctta 1228 Score = 206 bits (104), Expect = 5e-50 Identities = 155/172 (90%) Strand = Plus / Plus Query: 325 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 384 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 385 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 444 ||||||| |||| ||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatc 1389 Query: 445 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 496 | | |||||| |||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 1390 atactgaaaggtttagttgatggacaataggttaatattcctatactacccc 1441
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 291 bits (147), Expect = 1e-75 Identities = 166/171 (97%), Gaps = 1/171 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19152860 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacaacccggatc 19152919 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 19152920 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagatagc 19152979 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 196 |||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 19152980 caggaggtttgcctagaagcagccaccctttaaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 291 bits (147), Expect = 1e-75 Identities = 166/171 (97%), Gaps = 1/171 (0%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 85 |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 76255 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacaacccggatc 76314 Query: 86 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 76315 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagatagc 76374 Query: 146 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 196 |||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 76375 caggaggtttgcctagaagcagccaccctttaaagagtgcgttatatctca 76425
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 289 bits (146), Expect = 5e-75 Identities = 385/462 (83%), Gaps = 7/462 (1%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| | ||||||||||||||||||||||||||| |||| || |||||| |||||| Sbjct: 971 gtgagaccacgggggataagcttcatcgtcgagaggggaacattccagatcactagctaa 1030 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 | |||||||||||||||| ||| ||||||||||| ||||||| ||||| |||||||||| Sbjct: 1031 gccccctaaatgaccgctaagttataaaggaggt-agggtgcatagacatccaggaggtt 1089 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||| ||||||||||||||| |||| |||||||| ||||| | || ||||| Sbjct: 1090 tgcctagaagaagccaccctttaaagcgtgcataatagctaactgacaaacagctcttgc 1149 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 | ||| ||||||| | |||| |||| | |||||||||||||||| |||||||| Sbjct: 1150 accgaaaatgaacgagaataagagatccgtcgaagctgtgggatgt-----agcatcggt 1204 Query: 275 aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 334 |||||||||||| ||||| ||||||||| | || ||| | || || ||||| |||| Sbjct: 1205 aggggagcgttcttccttatagggaagcacctgcacgagcagttgtggatgaagcagaag 1264 Query: 335 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 394 ||||||||||||||||||||| ||||||||| ||||||||||| |||| |||||| || Sbjct: 1265 tgagaatgtcggcttgagtaacacaaacattggcgagaatccaattccccaaaaacctaa 1324 Query: 395 ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 454 || ||||| | |||||||| |||||| ||||||||||||| |||||||||| | ||||| Sbjct: 1325 gggttccttcacaaggttcatccacgtagggtgagtcaggtcctaagatcatactgaaag 1384 Query: 455 gcgtagtcgatggacaacaggtcaatattcctgtactacccc 496 | || | |||||| || |||| |||| |||||||||||||| Sbjct: 1385 gttta-ttgatggataataggttaataatcctgtactacccc 1425
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 285 bits (144), Expect = 7e-74 Identities = 204/224 (91%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 969 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaa 1028 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||||||| |||| ||||||||||| | ||| | ||| |||||||||| Sbjct: 1029 ggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggaggtt 1088 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1089 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttcttgc 1148 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1149 gccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Plus Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| ||||| | ||||||||||| | ||||| ||||||| |||||| || Sbjct: 1359 aaaacctaagggttcctttactaggttcgtccatgaagggttagtcaggacctaaggcca 1418 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 | |||||||| |||||||||||| ||||||| |||||||||||||| Sbjct: 1419 gaccgaaaggtgtagtcgatggagaacaggttaatattcctgtact 1464 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 atcggtaggggagcgttccgc 289 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 264 bits (133), Expect = 3e-67 Identities = 199/221 (90%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 573 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 632 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||| Sbjct: 633 ggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccaggaggtt 692 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | ||| Sbjct: 693 tgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcctgc 752 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 || ||| |||||||||||||||||| ||||||||||||||| Sbjct: 753 gccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 143 bits (72), Expect = 6e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| ||||||||||||||||||| |||||| ||| ||||||| |||||||| | Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaattagggtaagaatccctaaccccgaaacc 932 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 933 ccaagggttcctccgcaaggctcgtccacggagggttagtcagggcctaaggcgaggccg 992 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 |||||||||||||||||||||| ||| || ||||| |||| Sbjct: 993 aaaggcgtagtcgatggacaacgggttaacattcccgtac 1032
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 264 bits (133), Expect = 3e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 271 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 330 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 | |||| ||||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtgagtcaggtcctaagataaggccg 1371 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctg 487 ||||||||||||||||| | ||||| |||||||||| Sbjct: 1372 aaaggcgtagtcgatggctatcaggttaatattcctg 1408 Score = 254 bits (128), Expect = 2e-64 Identities = 197/220 (89%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| |||| Sbjct: 948 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccatctaa 1007 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||||||| Sbjct: 1008 ggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccaggaggtt 1067 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || || Sbjct: 1068 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctctcgc 1127 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1128 gccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 1106 gtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagctaa 1165 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||| |||| ||||| |||| ||||||||||| | |||| | ||| |||||||||| Sbjct: 1166 ggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggaggtt 1225 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||| |||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1226 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttcttgc 1285 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1286 gccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Plus Query: 269 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 328 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 ||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| |||| Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaaggcgaggc 1589 Query: 449 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1590 cgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1632
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 262 bits (132), Expect = 1e-66 Identities = 225/255 (88%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 955 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 1014 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| |||| |||||||||||||||||| ||| | |||| ||||| |||||||||| Sbjct: 1015 ggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaaccaggaggtt 1074 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1075 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgc 1134 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||| ||||||| |||||||||||||| |||| || ||||||| Sbjct: 1135 gccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--tcatcggt 1192 Query: 275 aggggagcgttccgc 289 ||||||||||||||| Sbjct: 1193 aggggagcgttccgc 1207 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||||| |||| ||||| | ||| ||||||| ||||||||||||||| |||||| Sbjct: 1300 tccgaaaacctaagggttccttcagtaggctcgtccatggagggtgagtcaggacctaag 1359 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 1360 gagaggccgaaaggcgtatccgatggccaacaggttaacattcctgtact 1409
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 262 bits (132), Expect = 1e-66 Identities = 198/220 (90%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 963 gtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaa 1022 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||||||||||||||| | ||| | ||| |||||||||| Sbjct: 1023 ggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggaggtt 1082 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||| Sbjct: 1083 tgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttcttgc 1142 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1143 gccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 242 bits (122), Expect = 9e-61 Identities = 158/170 (92%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 1328 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcagggcctaag 1387 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1388 gcgaggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1437 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 atcggtaggggagcgttccgc 289 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1342 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 1401 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1402 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1451 Score = 238 bits (120), Expect = 1e-59 Identities = 195/220 (88%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 975 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagttaa 1034 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||| ||| |||| |||||||||| | |||| ||||| |||||||||| Sbjct: 1035 ggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggaggtt 1094 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1095 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgc 1154 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || || ||||||||| |||||| ||||||||||||||| Sbjct: 1155 gcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 3111 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 3170 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 3171 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 3220 Score = 238 bits (120), Expect = 1e-59 Identities = 195/220 (88%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| ||| Sbjct: 2744 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagttaa 2803 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||||| ||| |||| |||||||||| | |||| ||||| |||||||||| Sbjct: 2804 ggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggaggtt 2863 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 2864 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgc 2923 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || || ||||||||| |||||| ||||||||||||||| Sbjct: 2924 gcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 244 bits (123), Expect = 2e-61 Identities = 195/219 (89%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||| Sbjct: 170528 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagctaa 170469 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||||| |||||||||| |||||||||| | |||| ||||| |||||||||| Sbjct: 170468 ggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggaggtt 170409 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || || Sbjct: 170408 tgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctctcgc 170349 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgt 253 || ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170348 gccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 244 bits (123), Expect = 2e-61 Identities = 195/219 (89%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||| Sbjct: 122398 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagctaa 122457 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||||| |||||||||| |||||||||| | |||| ||||| |||||||||| Sbjct: 122458 ggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggaggtt 122517 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || || Sbjct: 122518 tgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctctcgc 122577 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgt 253 || ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122578 gccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 272 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 331 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 332 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 391 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 392 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 451 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 170115 Query: 452 aaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 170114 caggcgtagtcgatggcaaactggttaatattcctgtact 170075 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 272 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 331 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 332 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 391 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 392 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 451 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 122811 Query: 452 aaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 122812 caggcgtagtcgatggcaaactggttaatattcctgtact 122851
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 244 bits (123), Expect = 2e-61 Identities = 223/255 (87%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||| ||| ||||||||||||||||||| || || | ||||| Sbjct: 958 gtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcggctaa 1017 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||||| || |||||||||||||||| | |||| ||||| |||||||||| Sbjct: 1018 ggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccaggaggtt 1077 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| Sbjct: 1078 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgc 1137 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-catcgg 273 || ||| ||||||||| ||||| |||||||||||||||||||| ||| || ||||| Sbjct: 1138 gccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgttatcgg 1197 Query: 274 taggggagcgttccg 288 ||||||||||||||| Sbjct: 1198 taggggagcgttccg 1212 Score = 139 bits (70), Expect = 1e-29 Identities = 143/166 (86%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 387 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 388 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 447 | ||||||| ||||||| | ||| ||||||| ||||||| ||||||| ||||||| ||| Sbjct: 1312 agcccaagggttcctccactaggctcgtccagggagggtcagtcaggacctaagacgagg 1371 Query: 448 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 493 || || |||| |||||||||| |||||| || ||||||||||||| Sbjct: 1372 ccaaacggcgcagtcgatggaaaacaggcgaacattcctgtactac 1417
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 244 bits (123), Expect = 2e-61 Identities = 195/219 (89%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||| Sbjct: 989 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagctaa 1048 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||||| |||||||||| |||||||||| | |||| ||||| |||||||||| Sbjct: 1049 ggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggaggtt 1108 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || || Sbjct: 1109 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctctcgc 1168 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgt 253 || ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1169 gccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 272 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 331 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 332 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 391 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 392 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 451 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 1402 Query: 452 aaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 1403 caggcgtagtcgatggcaaactggttaatattcctgtact 1442
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 242 bits (122), Expect = 9e-61 Identities = 221/254 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 2653 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 2712 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||||||| Sbjct: 2713 ggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactaggaggtt 2772 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| | ||| Sbjct: 2773 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctcctgc 2832 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 274 || ||| ||||||||||||||| ||| | ||||||||||||||| |||| |||||| Sbjct: 2833 gccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaatcggt 2892 Query: 275 aggggagcgttccg 288 |||||||||||||| Sbjct: 2893 aggggagcgttccg 2906 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 336 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 395 ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaccctaag 3014 Query: 396 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 455 | |||||||| |||||||||| |||||||| |||| || |||||| ||| ||||||| Sbjct: 3015 ggttcctccggcaggttcgtccgcggagggttagtcgggacctaaggcgaggtcgaaagg 3074 Query: 456 cgtagtcgatggaca 470 ||||||||||||||| Sbjct: 3075 cgtagtcgatggaca 3089
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 242 bits (122), Expect = 9e-61 Identities = 195/218 (89%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 574 agacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccagctaaggt 633 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 ||| ||||||| ||| |||||||||||||||| | ||||| |||| ||||||||||||| Sbjct: 634 ccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccaggaggtttgc 693 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 |||||||||||||||||| ||||||||||||||||||||||| || ||||| ||| ||| Sbjct: 694 ctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctctt-cgcc 752 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||| |||||||||||||||| ||| |||||||||||| Sbjct: 753 gaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 69.9 bits (35), Expect = 8e-09 Identities = 131/163 (80%) Strand = Plus / Plus Query: 328 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 387 ||||||| ||||||||||||||||||| || ||| | ||||||||||| | ||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcctacaccccgaa 922 Query: 388 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 447 | || |||| |||| || ||| |||||| | |||||||||||| |||||| ||| Sbjct: 923 accctaagggttccagagccaggctcgtccgctctgggtgagtcaggtcctaaggcgagg 982 Query: 448 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 || || ||||||||||||||| ||| ||| || ||||| |||| Sbjct: 983 ccaaacggcgtagtcgatggataacgggttaacattcccgtac 1025
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 242 bits (122), Expect = 9e-61 Identities = 197/222 (88%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 1093 gtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaa 1152 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| ||||| Sbjct: 1153 ggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaaggtt 1212 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1213 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttcttgc 1272 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtggg 256 || ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1273 gccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| ||||||| | ||| ||||||| || |||| |||| || |||||| || Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtccatggggggttagtcgggacctaaggcca 1513 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1514 ggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1559
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 689 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 749 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 750 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 5434414 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 5434355 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 5434354 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 5434295 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 5434294 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 5434235 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434234 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 3897024 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 3897083 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 3897084 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 3897143 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 3897144 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 3897203 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897204 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2807135 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2807076 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 2807075 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 2807016 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 2807015 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 2806956 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806955 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 1005867 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 1005926 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 1005927 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 1005986 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 1005987 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 1006046 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006047 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5434056 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5433997 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 5433996 cgaaaggcgtagtcgatggaca 5433975 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 3897382 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 3897441 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 3897442 cgaaaggcgtagtcgatggaca 3897463 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2806777 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2806718 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 2806717 cgaaaggcgtagtcgatggaca 2806696 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 1006225 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 1006284 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 1006285 cgaaaggcgtagtcgatggaca 1006306
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 5944454 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 5944395 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 5944394 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 5944335 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 5944334 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 5944275 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944274 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 4916810 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 4916751 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 4916750 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 4916691 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 4916690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 4916631 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916630 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2503486 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2503545 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 2503546 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 2503605 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 2503606 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 2503665 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503666 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2378695 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2378754 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 2378755 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 2378814 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 2378815 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatcttgc 2378874 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378875 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5944099 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5944040 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 5944039 cgaaaggcgtagtcgatggaca 5944018 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 4916455 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 4916396 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 4916395 cgaaaggcgtagtcgatggaca 4916374 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2503841 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2503900 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 2503901 cgaaaggcgtagtcgatggaca 2503922 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2380521 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2380580 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 2380581 cgaaaggcgtagtcgatggaca 2380602
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 236 bits (119), Expect = 6e-59 Identities = 158/171 (92%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1492 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcaggacctaag 1551 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 492 ||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1552 gccaggccgaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1602 Score = 218 bits (110), Expect = 1e-53 Identities = 194/222 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||| Sbjct: 1026 gtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagctaa 1085 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||| |||| ||||| |||| |||||||||| | ||| | ||| |||||||||| Sbjct: 1086 ggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggtt 1145 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 1146 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgc 1205 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtggg 256 || ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1206 gccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 232 bits (117), Expect = 9e-58 Identities = 195/221 (88%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2485 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2544 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||||| || ||||| |||||||||||| ||||| |||| |||||||||| Sbjct: 2545 ggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtt 2604 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | ||| Sbjct: 2605 tgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcctgc 2664 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 || ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2665 gccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2838 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2897 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 2898 aaaagcgtagtcgatggacaacgggttaacattcccgtac 2937
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 230 bits (116), Expect = 4e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | | || |||||||||||||||| | |||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactaggaggtt 689 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||||| Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtcttgc 749 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 750 gccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 919 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 978 Query: 442 atcaggccgaaaggcgtagtcgatggaca 470 ||| |||||||||||||||||||||| Sbjct: 979 gcgaggtcgaaaggcgtagtcgatggaca 1007
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 230 bits (116), Expect = 4e-57 Identities = 200/228 (87%) Strand = Plus / Minus Query: 28 gtcggccgtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 87 |||||| |||||||| ||||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 2050909 gtcggcagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccac 2050850 Query: 88 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 147 || |||||||||| || | ||||||||||| |||||||||||||||| ||||| ||| Sbjct: 2050849 caactaaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaacca 2050790 Query: 148 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 207 ||||||| || ||||||||||||||||||||| ||||||||| |||| |||| || |||| Sbjct: 2050789 ggaggttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcg 2050730 Query: 208 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||||||||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050729 cccttgcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 230 bits (116), Expect = 4e-57 Identities = 200/228 (87%) Strand = Plus / Plus Query: 28 gtcggccgtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 87 |||||| |||||||| ||||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 1450592 gtcggcagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccac 1450651 Query: 88 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 147 || |||||||||| || | ||||||||||| |||||||||||||||| ||||| ||| Sbjct: 1450652 caactaaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaacca 1450711 Query: 148 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 207 ||||||| || ||||||||||||||||||||| ||||||||| |||| |||| || |||| Sbjct: 1450712 ggaggttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcg 1450771 Query: 208 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||||||||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450772 cccttgcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Minus Query: 272 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 331 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 332 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 391 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 392 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 451 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 2050553 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 2050494 Query: 452 aaggcgtagtcgatgga 468 |||||||||||||||| Sbjct: 2050493 caggcgtagtcgatgga 2050477 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 272 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 331 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 332 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 391 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 392 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 451 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 1450948 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 1451007 Query: 452 aaggcgtagtcgatgga 468 |||||||||||||||| Sbjct: 1451008 caggcgtagtcgatgga 1451024
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 230 bits (116), Expect = 4e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 948 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactagctaa 1007 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||||||| Sbjct: 1008 ggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccaggaggtt 1067 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||||| |||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1068 tgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttcttgc 1127 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1128 gccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1298 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 1357 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1358 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1407
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 230 bits (116), Expect = 4e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 25757 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactagctaa 25816 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||||||| Sbjct: 25817 ggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccaggaggtt 25876 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||||| |||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 25877 tgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttcttgc 25936 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25937 gccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 26107 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 26166 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 26167 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 26216
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 268 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 327 ||||||||||||||||||||| | ||| | |||||| || ||| | | || |||||| Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078 Query: 328 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 387 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3079 acggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 3138 Query: 388 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 447 ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 3139 aacccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggcgagg 3198 Query: 448 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||||||||||||||||||||| ||| | | |||||||| |||| Sbjct: 3199 ccgaaaggcgtagtcgatggataacggattaatattcccgtac 3241 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 44 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 103 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 104 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 163 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 164 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 223 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 224 gaacggggctaagcgatctgccgaagctgtgggatgt 260 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 226 bits (114), Expect = 6e-56 Identities = 180/202 (89%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| || ||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 630 ggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccaggaggtt 689 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| ||||||||||||||||||||||| || |||| | ||| Sbjct: 690 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcctgc 749 Query: 215 gctgaagatgaacggggctaag 236 || ||| ||||||||||||||| Sbjct: 750 gccgaaaatgaacggggctaag 771 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 920 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 979 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 980 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1029
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 226 bits (114), Expect = 6e-56 Identities = 195/222 (87%) Strand = Plus / Plus Query: 270 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 329 |||||||||||||||||||| | | | ||||| | || ||| |||||| |||||||| Sbjct: 1273 tcggtaggggagcgttccgctctcgggtgaagctttcacggaagtgggggtggacgaagc 1332 Query: 330 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 389 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1392 Query: 390 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 449 || |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||| ||||| Sbjct: 1393 cctaagggttcctccactaggctcgtccatggggggttagtcaggacctaagactaggcc 1452 Query: 450 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1453 gaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1494 Score = 93.7 bits (47), Expect = 5e-16 Identities = 172/213 (80%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 45 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 104 |||||||||||| | | ||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1030 gggggataagctccgttgtcaagagggaaacagcccagatcaccagctaaggcccctaaa 1089 Query: 105 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 164 || | || |||| ||||| ||| | ||| | ||| |||||||||| || |||||| Sbjct: 1090 tggtcactaagtggataaggatgtgagaatgcttaaacaaccaggaggttcgcttagaag 1149 Query: 165 cagc---caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 221 |||| | |||| ||||||||||||||||||||||| | |||| ||||||| || Sbjct: 1150 cagctatcttccttgaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgaga 1209 Query: 222 atgaacggggctaagcgatctgccgaagctgtg 254 ||| |||| ||||| || |||||||||||||| Sbjct: 1210 atggccgggactaagtgacctgccgaagctgtg 1242
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 195/221 (88%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 569 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 628 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||||| || ||||| |||||||||||| ||||| |||| |||||||||| Sbjct: 629 ggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtt 688 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | | | Sbjct: 689 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcct-c 747 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 || ||| ||||||||||||||| |||| |||||||||||| Sbjct: 748 gccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 921 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 980 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 981 aaaagcgtagtcgatggacaacgggttaacattcccgtac 1020
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 224 bits (113), Expect = 2e-55 Identities = 223/258 (86%), Gaps = 5/258 (1%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 629 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactaggaggtt 689 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| ||| | Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctctt-c 748 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaatgcat 270 || ||| ||||||||||||||||||| | ||||||||||||||| | ||||| || Sbjct: 749 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaataaat 808 Query: 271 cggtaggggagcgttccg 288 |||||||||||||||||| Sbjct: 809 cggtaggggagcgttccg 826 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||| || |||| |||| || |||||||||| | |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccgctctgggttagtccggacctaag 980 Query: 442 atcaggccgaaaggcgtagtcgatggaca 470 ||| |||||||||||||||||||||| Sbjct: 981 gcgaggtcgaaaggcgtagtcgatggaca 1009
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 224 bits (113), Expect = 2e-55 Identities = 113/113 (100%) Strand = Plus / Plus Query: 404 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 60 Query: 464 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacgg 516 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggacaacaggtcaatattcctgtactaccccttgttggtacggagggacgg 113
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 222 bits (112), Expect = 9e-55 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 629 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactaggaggtt 689 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| | | | Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctcct-c 748 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||| || |||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 919 cccgaaaccctaaggtttcctccgccaggttcgtccccggagggttagtcaggacctaag 978 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 |||||||| ||||||||||||||||||| ||| || ||||| ||||| Sbjct: 979 gcgaggccgaacggcgtagtcgatggacaacgggttaaaattcccgtact 1028 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 atcggtaggggagcgttccg 288 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 222 bits (112), Expect = 9e-55 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactaggaggtt 689 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || |||| ||| | Sbjct: 690 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatctt-c 748 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 449 cgaaaggcgtagtcgatggaca 470 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 222 bits (112), Expect = 9e-55 Identities = 199/228 (87%) Strand = Plus / Plus Query: 28 gtcggccgtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 87 |||||| |||||||| ||||||||||||| |||||||||||||| |||||||| || ||| Sbjct: 2313243 gtcggcagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccac 2313302 Query: 88 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 147 || |||||||||| || | ||||||||| | |||||||||||||||| |||||| ||| Sbjct: 2313303 caactaaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaacca 2313362 Query: 148 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 207 ||||||| || ||||||||||||||||||||| ||||||||| |||| |||| || |||| Sbjct: 2313363 ggaggttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcg 2313422 Query: 208 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||||||||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313423 cccttgcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 222 bits (112), Expect = 9e-55 Identities = 199/228 (87%) Strand = Plus / Minus Query: 28 gtcggccgtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 87 |||||| |||||||| ||||||||||||| |||||||||||||| |||||||| || ||| Sbjct: 1108604 gtcggcagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccac 1108545 Query: 88 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 147 || |||||||||| || | ||||||||| | |||||||||||||||| |||||| ||| Sbjct: 1108544 caactaaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaacca 1108485 Query: 148 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 207 ||||||| || ||||||||||||||||||||| ||||||||| |||| |||| || |||| Sbjct: 1108484 ggaggttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcg 1108425 Query: 208 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||||||||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108424 cccttgcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 2313589 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 2313648 Query: 442 atcaggccgaaaggcgtagtcgatggaca 470 ||||||| |||||||||||||||||| Sbjct: 2313649 gcgaggccgacaggcgtagtcgatggaca 2313677 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 1108258 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 1108199 Query: 442 atcaggccgaaaggcgtagtcgatggaca 470 ||||||| |||||||||||||||||| Sbjct: 1108198 gcgaggccgacaggcgtagtcgatggaca 1108170
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 137445 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaa 137504 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| ||||| Sbjct: 137505 ggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaaggtt 137564 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| ||||| Sbjct: 137565 tgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttcttgc 137624 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137625 gccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 48099 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaa 48040 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| ||||| Sbjct: 48039 ggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaaggtt 47980 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| ||||| Sbjct: 47979 tgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttcttgc 47920 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47919 gccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 210 bits (106), Expect = 3e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 137800 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 137859 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 137860 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 137909 Score = 210 bits (106), Expect = 3e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 47744 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 47685 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 47684 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 47635
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 220 bits (111), Expect = 3e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 492 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 159 bits (80), Expect = 1e-35 Identities = 185/220 (84%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 1032 gtgagaccgtgggggataagcttcatggtcaagagggaaacagcccagatcaccagctaa 1091 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||| || | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 1092 ggcccctaagtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 1151 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 1152 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 1211 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || || ||| |||| ||||| || |||||||||||||| Sbjct: 1212 gccgataatggccgggactaagtgacctgccgaagctgtg 1251
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 220 bits (111), Expect = 3e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 492 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 159 bits (80), Expect = 1e-35 Identities = 185/220 (84%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 1032 gtgagaccgtgggggataagcttcatggtcaagagggaaacagcccagatcaccagctaa 1091 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||| || | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 1092 ggcccctaagtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 1151 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 1152 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 1211 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || || ||| |||| ||||| || |||||||||||||| Sbjct: 1212 gccgataatggccgggactaagtgacctgccgaagctgtg 1251
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 218 bits (110), Expect = 1e-53 Identities = 180/202 (89%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 571 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 630 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| ||| || ||||| |||||||||||| ||||| ||||| |||||||||| Sbjct: 631 ggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggaggtt 690 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | | | Sbjct: 691 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-c 749 Query: 215 gctgaagatgaacggggctaag 236 || ||| ||||||||||||||| Sbjct: 750 gccgaaaatgaacggggctaag 771 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | | Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcctaaac 916 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||| || |||| |||||||| | || |||||| ||||||||||||||||||||||| Sbjct: 917 cccgaaaccctaagggttcctccggacggctcgtccgcggagggtgagtcagggcctaag 976 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcc 485 |||| ||| |||||||||||||| ||| ||| || ||||| Sbjct: 977 gcgaggctgaacagcgtagtcgatggataacgggttaaaattcc 1020
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 218 bits (110), Expect = 1e-53 Identities = 191/218 (87%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 3327971 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 3328030 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||||||||| Sbjct: 3328031 ccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgc 3328090 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | ||||| Sbjct: 3328091 ctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcgcc 3328150 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328151 gaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 218 bits (110), Expect = 1e-53 Identities = 191/218 (87%) Strand = Plus / Minus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 2450757 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 2450698 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||||||||| Sbjct: 2450697 ccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgc 2450638 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | ||||| Sbjct: 2450637 ctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcgcc 2450578 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450577 gaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 3328321 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 3328322 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 3328381 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 3328382 agaggcgtagtcgatggacaaccggtcaatattccggtact 3328422 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 2450407 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 2450406 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 2450347 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 2450346 agaggcgtagtcgatggacaaccggtcaatattccggtact 2450306
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 216 bits (109), Expect = 5e-53 Identities = 193/221 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 2484 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 2543 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||||| || ||||| |||||||||||| ||||| |||| |||||||||| Sbjct: 2544 ggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtt 2603 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | ||| Sbjct: 2604 tgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgc 2663 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 || ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2664 gccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2837 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2896 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||| |||||||||||||| ||| ||| || ||||| |||| Sbjct: 2897 aaaagcgtagtcgatggataacgggttaacattcccgtac 2936
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 5e-53 Identities = 154/169 (91%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 1786 cccgaaaacccaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 1845 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 |||||||||||||||||||||||| ||| ||| |||||||| |||| Sbjct: 1846 gcgaggccgaaaggcgtagtcgatggataacgggttaatattcccgtac 1894 Score = 216 bits (109), Expect = 5e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 44 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 103 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 104 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 163 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 164 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 223 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 224 gaacggggctaagcgatctgccgaagctgtgggatgt 260 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 214 bits (108), Expect = 2e-52 Identities = 196/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 629 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactaggaggtt 689 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| | | | Sbjct: 690 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctcct-c 748 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| || ||| | ||||||||| | |||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacaccccgaaa 927 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 || |||| ||||||||| ||||||||||||||||||| |||| || |||||| ||| Sbjct: 928 ccctaagggttcctccgccaggttcgtccacggagggttagtcgggtcctaaggcgaggt 987 Query: 449 cgaaaggcgtagtcgatggaca 470 |||| ||||||||||||||||| Sbjct: 988 cgaagggcgtagtcgatggaca 1009
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||| Sbjct: 936 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagctaa 995 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| |||| ||||| |||| ||||||||||| | |||| | |||||||||||||| Sbjct: 996 ggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggaggtt 1055 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 1056 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttcttgc 1115 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgggat 258 || ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1116 gccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| |||| ||||||| | ||||||||||| ||||||| ||||||| ||||| || Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggttagtcaggacctaaagcca 1355 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 |||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 1356 ggccgaaaggcgtagttgatggaaaacaggttaatattcctgtact 1401 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 atcggtaggggagcgttccg 288 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 8e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 44 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 103 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 104 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 163 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 164 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 223 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 224 gaacggggctaagcgatctgccgaagctgtgggat 258 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||| ||||| ||||||| | ||||| ||||||| |||||| Sbjct: 1341 cccgaaaacctaagggttcctttacaaggctcgtccatgaagggttagtcaggtcctaag 1400 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1401 gcgaggtcgaaaggcgtagtcgatggaaaacaggtcaacattcctgtact 1450
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 210 bits (106), Expect = 3e-51 Identities = 179/202 (88%), Gaps = 1/202 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaa 629 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| || ||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 630 ggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccaggaggtt 689 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | | Sbjct: 690 tgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcct-c 748 Query: 215 gctgaagatgaacggggctaag 236 || ||| ||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaag 770 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 918 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 977 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 978 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1027
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 210 bits (106), Expect = 3e-51 Identities = 190/218 (87%) Strand = Plus / Minus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 2333864 agacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggt 2333805 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 ||| |||| | | || |||| ||||||||||||| ||| ||||| ||||||||||||| Sbjct: 2333804 ccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccaggaggtttgc 2333745 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 ||||||||||||| |||| ||||||||||||||||||||||| || |||| | ||||| Sbjct: 2333744 ctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcctgcgcc 2333685 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333684 gaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 186 bits (94), Expect = 5e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||| ||||||| ||||| || |||| |||||| || ||||| |||| || |||||| Sbjct: 2333521 cccgaaaccccaagggttccttcggaaggctcgtccgcgaagggttagtcgggacctaag 2333462 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 |||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 2333461 gcgaggccgaaaggcgtagtcgatggacaactggtcaatattccagtact 2333412
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 326 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 385 |||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2999 aagcagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccg 3058 Query: 386 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 445 |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 3059 aaaacctaaggtttcctctggaaggttcgtccacggagggtgagtcagggcctaaggcga 3118 Query: 446 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||| |||| |||||||||||||| |||||| |||||||||||||| Sbjct: 3119 ggctgaaaagcgtagtcgatggatgacaggttaatattcctgtact 3164 Score = 157 bits (79), Expect = 4e-35 Identities = 212/253 (83%), Gaps = 5/253 (1%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| | ||||||||||||| || |||||||||| Sbjct: 2712 gtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaa 2771 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||| || |||| |||||| ||||| |||| ||||| |||||||||| Sbjct: 2772 ggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggaggtt 2831 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| |||||||||| |||||||||||||||||||||||||||||| || || | | ||| Sbjct: 2832 tgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcctgc 2891 Query: 215 gctgaagatgaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcatcgg 273 || ||| ||||| ||| || || ||| ||||||||||||||||||| || |||||| Sbjct: 2892 gccgaaaatgaatgggacttag-tatcttgccgaagctgtgggatgtttaa---catcgg 2947 Query: 274 taggggagcgttc 286 ||||||||||||| Sbjct: 2948 taggggagcgttc 2960
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 208 bits (105), Expect = 1e-50 Identities = 189/217 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || || ||||||| Sbjct: 960 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagctaa 1019 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||| |||||||||| | ||| | ||| |||||||||| Sbjct: 1020 ggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggtt 1079 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 1080 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgc 1139 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagct 251 || ||| |||| |||| ||||||| ||||||||||| Sbjct: 1140 gccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 272 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 331 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 332 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 391 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327 Query: 392 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 443 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 1379 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 457 gtagtcgatggacaacaggtcaatattcctgtact 491 |||||||||||| ||||||| |||||||||||||| Sbjct: 1397 gtagtcgatggaaaacaggttaatattcctgtact 1431
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151116 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 151057 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 151056 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 150997 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 150996 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 150948 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43087 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 43146 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 43147 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 43206 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 43207 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 43255 Score = 167 bits (84), Expect = 4e-38 Identities = 186/220 (84%) Strand = Plus / Minus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 151410 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 151351 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 151350 ggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 151291 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 151290 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 151231 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || || ||| |||| ||||| || |||||||||||||| Sbjct: 151230 gccgataatggccgggactaagtgacctgccgaagctgtg 151191 Score = 167 bits (84), Expect = 4e-38 Identities = 186/220 (84%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 42793 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 42852 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 42853 ggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 42912 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 42913 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 42972 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || || ||| |||| ||||| || |||||||||||||| Sbjct: 42973 gccgataatggccgggactaagtgacctgccgaagctgtg 43012
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 208 bits (105), Expect = 1e-50 Identities = 189/217 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||| ||||||||||||||| || || ||||||| Sbjct: 2842 gtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagctaa 2901 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| ||||| |||| |||||||||| | ||| | ||| |||||||||| Sbjct: 2902 ggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggtt 2961 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 2962 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgc 3021 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagct 251 || ||| |||| |||| ||||||| ||||||||||| Sbjct: 3022 gccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 272 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 331 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 332 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 391 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209 Query: 392 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 443 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 3261 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 457 gtagtcgatggacaacaggtcaatattcctgtact 491 |||||||||||| ||||||| |||||||||||||| Sbjct: 3279 gtagtcgatggaaaacaggttaatattcctgtact 3313
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1318 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1319 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1378 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 1379 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 1427 Score = 167 bits (84), Expect = 4e-38 Identities = 186/220 (84%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 965 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 1024 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 1025 ggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 1084 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 1085 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 1144 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || || ||| |||| ||||| || |||||||||||||| Sbjct: 1145 gccgataatggccgggactaagtgacctgccgaagctgtg 1184
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Plus Query: 336 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 1346 Query: 396 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 455 | ||||||| | ||||||||||| || |||| ||||||| ||||||| |||||| ||||| Sbjct: 1347 ggttcctccactaggttcgtccatggggggttagtcaggacctaagaccaggccaaaagg 1406 Query: 456 cgtagtcgatggacaacaggtcaatattcctgtacta 492 ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1407 cgtcgtcgatggaaaacaggttaatattcctgtacta 1443 Score = 168 bits (85), Expect = 1e-38 Identities = 187/221 (84%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 981 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaa 1040 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||||||||| | || |||| |||||| ||| | ||| | ||| |||||||||| Sbjct: 1041 ggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtt 1100 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||| ||||||||||||||||| ||||||||||||||||||||||| | |||| ||||| Sbjct: 1101 tgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgc 1160 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 || || ||| |||| ||||| || ||||||||||||||| Sbjct: 1161 gccgataatggccgggactaagtgacctgccgaagctgtgg 1201
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 206 bits (104), Expect = 5e-50 Identities = 191/220 (86%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||||||| Sbjct: 570 gtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaa 629 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||||||| Sbjct: 630 ggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactaggaggtt 689 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| | ||| Sbjct: 690 tgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctcctgc 749 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 750 gccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 |||||| |||||| ||||||||||||||||||| || ||| | ||||||||| | | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacac 920 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 980 Query: 442 atcaggccgaaaggcgtagtcgatggaca 470 |||||||| ||||||||||||||||| Sbjct: 981 gcgaggccgaacggcgtagtcgatggaca 1009
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 204 bits (103), Expect = 2e-49 Identities = 178/203 (87%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||| Sbjct: 569 gtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagctaa 628 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 || ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||||| Sbjct: 629 ggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggaggtt 688 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 ||||||||||||||||||||| ||||||||||||||||||||||| || |||| | ||| Sbjct: 689 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcctgc 748 Query: 215 gctgaagatgaacggggctaagc 237 || ||| |||||||||||||||| Sbjct: 749 gccgaaaatgaacggggctaagc 771 Score = 157 bits (79), Expect = 4e-35 Identities = 145/167 (86%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||| || |||| |||||||| ||||||||||| |||||||| || | || |||||| Sbjct: 907 tccgaaaccctaagggttcctccggaaggttcgtccgcggagggttagccgggacctaag 966 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgt 488 | |||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 967 gcgaagccgaagggcgtagtcgatggataacaggtgtatattcctgt 1013
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 ||| |||| |||||| ||||||||||||| || |||| |||||||||||||| |||| Sbjct: 1932 acctaagggttcctctacaaggttcgtccatggggggttagtcagggcctaaggcgaggc 1991 Query: 449 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 |||| ||||||||||||||| ||||||| |||||||||||||| Sbjct: 1992 cgaatggcgtagtcgatggaaaacaggttaatattcctgtact 2034 Score = 109 bits (55), Expect = 9e-21 Identities = 154/187 (82%) Strand = Plus / Plus Query: 68 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 127 ||||||||||||| ||||||||||||||||||||||||| || || |||| |||||| | Sbjct: 1346 agggaaacagcccagatcaccagctaaggcccctaaatggccactaagtggaaaaggatg 1405 Query: 128 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 187 || | |||| | ||| ||||||||||||| |||||||||| | |||||||||||| ||| Sbjct: 1406 tgagaatgcataaacaaccaggaggtttgcttagaagcagcaatcctttaaagagttcgt 1465 Query: 188 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 247 || || ||||| | |||| ||||||| ||| || | |||| ||||| | ||||||| Sbjct: 1466 aacagaacactggtaaagcgttcttgcgccgaaaataaccgggactaagtggcctgccga 1525 Query: 248 agctgtg 254 ||||||| Sbjct: 1526 agctgtg 1532
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1318 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgtgaatccaatgccccgaaa 1377 Query: 389 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 448 ||| || ||||||| | ||||||||||| || |||||||||||| |||||||| |||| Sbjct: 1378 accgttgggttcctccactaggttcgtccatggggggtgagtcaggacctaagattaggc 1437 Query: 449 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 |||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1438 cgaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1480 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 66 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 125 ||||||||||||||| ||||| ||||||||||||||||||| | || |||| |||||| Sbjct: 1024 agagggaaacagcccagatcattagctaaggcccctaaatgatcactaagtggaaaagga 1083 Query: 126 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 185 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1084 tgtgagaatgcccaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1143 Query: 186 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 245 |||||||||||||| | |||| |||||| || ||| |||| ||||| |||||||| Sbjct: 1144 gtaatagctcactggtaaagcgtttttgcgccgacaatggccgggactaagtgatctgcc 1203 Query: 246 gaagctgtg 254 ||||||||| Sbjct: 1204 gaagctgtg 1212 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 atcggtaggggagcgttccg 288 |||||||||||||||||||| Sbjct: 1259 atcggtaggggagcgttccg 1278
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 204 bits (103), Expect = 2e-49 Identities = 157/175 (89%) Strand = Plus / Plus Query: 317 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 376 |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1496 gggtggacgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatcc 1555 Query: 377 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 436 ||||||||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| | Sbjct: 1556 aatgccccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggac 1615 Query: 437 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 |||||| |||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 1616 ctaagactaggccgaaaggcgtcgtcgatggaaaacaggcgaatattcctgtact 1670 Score = 69.9 bits (35), Expect = 8e-09 Identities = 137/169 (81%), Gaps = 4/169 (2%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcat-cgtcgagagggaaacagcccggatcaccagcta 93 ||||||| | |||||||||||| | | ||| ||||||||||||||| ||||||||| || Sbjct: 1085 gtgagactacgggggataagctccgtatgtcaagagggaaacagcccagatcaccagata 1144 Query: 94 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 153 ||||||| ||||| | || |||| |||||| ||| | ||| | ||| ||||||||| Sbjct: 1145 aggccccaaaatggtcactaagtggaaaaggatgtgagaatgcttaaacaaccaggaggt 1204 Query: 154 ttgcctagaagcagc---caccctttaaagagtgcgtaatagctcactg 199 | || |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1205 tcgcttagaagcagctatcttccttgaaagagtgcgtaatagctcactg 1253
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 202 bits (102), Expect = 8e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 573 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 632 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 ||| ||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 633 ccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccaggaggtttgc 692 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 ||||||||||||| |||| ||||||||||||||||||||||| || |||| | | ||| Sbjct: 693 ctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatcct-cgcc 751 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||| |||||||||||||||| || |||||||||||| Sbjct: 752 gaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 |||||| |||||||| |||| |||||| |||||||| |||| || |||||| |||||| Sbjct: 926 ccaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaaggcgaggccg 985 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 |||||||||||||||||||||| ||| |||||||| |||| Sbjct: 986 aaaggcgtagtcgatggacaacgggttaatattcccgtac 1025
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 202 bits (102), Expect = 8e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| || |||||||||| ||||||||||||||||||||||| || |||||||||||| Sbjct: 573 agacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccagctaaggt 632 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 ||| ||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 633 cccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccaggaggtttgc 692 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 ||||||||||||| |||| ||||||||||||||||||||||| || |||| | | ||| Sbjct: 693 ctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatcct-cgcc 751 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||| |||||||||||||||| ||| |||||||||||| Sbjct: 752 gaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 ||||||| || |||| |||||||| |||| |||||| |||||||| |||| || |||||| Sbjct: 915 cccgaaaccctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaag 974 Query: 442 atcaggccgaaaggcgtagtcgatggaca 470 | |||||| ||||||||||||||||| Sbjct: 975 gcgaagccgaagggcgtagtcgatggaca 1003
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 202 bits (102), Expect = 8e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 574 agacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggt 633 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||||||||| Sbjct: 634 ccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgc 693 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| Sbjct: 694 ctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcct-cgcc 752 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 753 gaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 923 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 924 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 983 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 984 agaggcgtagtcgatggacaaccggtcaatattccggtact 1024
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 8e-49 Identities = 147/162 (90%) Strand = Plus / Plus Query: 330 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 389 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479 Query: 390 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 449 || |||| ||||||| | |||||||||| || |||||||||||| |||||| |||||| Sbjct: 1480 cctaagggttcctccaccaggttcgtccgtggggggtgagtcaggacctaaggccaggcc 1539 Query: 450 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 1540 gaaaggcgtcgtcgatggcaaacaggttaatattcctgtact 1581 Score = 131 bits (66), Expect = 2e-27 Identities = 132/154 (85%) Strand = Plus / Plus Query: 46 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 105 |||||||||||| || || ||||||||||||||| ||||||||||||||||||| |||| Sbjct: 1021 ggggataagcttgattttcaagagggaaacagcccagatcaccagctaaggccccaaaat 1080 Query: 106 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 165 | || |||| |||||| ||||| ||| | ||| ||||||||||||| ||||||| Sbjct: 1081 ggtgactaagtggaaaaggatgtgggaatgctgaaacaaccaggaggtttgcttagaagc 1140 Query: 166 agccaccctttaaagagtgcgtaatagctcactg 199 |||||||||| ||||||||||||||||||||||| Sbjct: 1141 agccacccttcaaagagtgcgtaatagctcactg 1174
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 200 bits (101), Expect = 3e-48 Identities = 192/221 (86%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| || |||||||||| ||||||||||||||||||||||| || | |||||||||| Sbjct: 571 agacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagctaaggt 630 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 631 ccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggaggtttgc 690 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| Sbjct: 691 ctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-cgcc 749 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgggat 258 ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 750 gaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcct 486 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 200 bits (101), Expect = 3e-48 Identities = 192/221 (86%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 38 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 97 ||||| || |||||||||| ||||||||||||||||||||||| || | |||||||||| Sbjct: 571 agacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagctaaggt 630 Query: 98 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 157 ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 631 ccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggaggtttgc 690 Query: 158 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 217 ||||||||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| Sbjct: 691 ctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-cgcc 749 Query: 218 gaagatgaacggggctaagcgatctgccgaagctgtgggat 258 ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 750 gaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcct 486 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 200 bits (101), Expect = 3e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 968 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaa 1027 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||| || ||| |||| |||||||||| ||| ||||| |||||||||| Sbjct: 1028 ggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggaggtt 1087 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 199 ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1088 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 1321 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 1380 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 1381 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 1430
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 200 bits (101), Expect = 3e-48 Identities = 149/165 (90%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 2706 gtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagctaa 2765 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 ||||||||||| || ||| |||| |||||||||| ||| ||||| |||||||||| Sbjct: 2766 ggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggaggtt 2825 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 199 ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2826 tgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 3059 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 3118 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 3119 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 3168
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 200 bits (101), Expect = 3e-48 Identities = 188/217 (86%) Strand = Plus / Minus Query: 44 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 103 ||||||||||||| ||| ||| ||||||||||||||| || |||||| |||||||||||| Sbjct: 114470 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggcccctaa 114411 Query: 104 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 163 || ||| |||| |||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 114410 atagtagctaagtggcaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 114351 Query: 164 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 223 ||||| | |||||||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 114350 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 114291 Query: 224 gaacggggctaagcgatctgccgaagctgtgggatgt 260 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 114290 gaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 200 bits (101), Expect = 3e-48 Identities = 188/217 (86%) Strand = Plus / Plus Query: 44 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 103 ||||||||||||| ||| ||| ||||||||||||||| || |||||| |||||||||||| Sbjct: 3047 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggcccctaa 3106 Query: 104 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 163 || ||| |||| |||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 3107 atagtagctaagtggcaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 3166 Query: 164 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 223 ||||| | |||||||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 3167 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 3226 Query: 224 gaacggggctaagcgatctgccgaagctgtgggatgt 260 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 3227 gaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 389 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 447 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 114116 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 114057 Query: 448 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 114056 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 114014 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 329 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 388 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 389 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 447 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 3401 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 3460 Query: 448 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 490 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 3461 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 3503 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 catcggtaggggagcgttccg 288 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 catcggtaggggagcgttccg 288 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 198 bits (100), Expect = 1e-47 Identities = 190/220 (86%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 ||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct: 961 gtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagttaa 1020 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||||| Sbjct: 1021 ggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggaggtt 1080 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 214 |||||||||||||||| |||| ||||||||||||||||||||||| || |||| | ||| Sbjct: 1081 tgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcctgc 1140 Query: 215 gctgaagatgaacggggctaagcgatctgccgaagctgtg 254 || ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1141 gccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 105 bits (53), Expect = 1e-19 Identities = 134/161 (83%) Strand = Plus / Plus Query: 331 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 390 |||| |||||||||||||||||||||| || |||| |||||| ||||| |||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacgtaattgaaggtgtgaatccttcaccccggaaac 1318 Query: 391 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 450 |||||| ||||||| | ||| ||||||| ||||||| ||||||| |||||| ||||| Sbjct: 1319 ccaagggttcctcctccaggctcgtccaaggagggttagtcaggtcctaaggcaaggcca 1378 Query: 451 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 || ||||||||||||||| |||||||||| ||||||||||| Sbjct: 1379 aacggcgtagtcgatggaaaacaggtcaacattcctgtact 1419
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 65 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 124 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 125 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 183 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 184 gcgtaatagctcactg 199 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 65 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 124 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 125 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 183 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 184 gcgtaatagctcactg 199 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 65.9 bits (33), Expect = 1e-07 Identities = 43/45 (95%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 27 ggtcggcc-gtgagacgatgggggataagcttcatcgtcgagagg 70 |||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 365144 ggtcggccagtgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 140 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 199 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 gtcgagagggaaacagcccggatc 85 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 44 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 103 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 104 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 163 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 164 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 223 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 224 gaacggggctaagcgatctgccgaagctgtgggat 258 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 44 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 103 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 104 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 163 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 164 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 223 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 224 gaacggggctaagcgatctgccgaagctgtgggat 258 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Plus Query: 317 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 376 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 377 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 436 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 193167 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 193226 Query: 437 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 193227 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 193281 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 317 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 376 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 377 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 436 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 143615 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 143556 Query: 437 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 491 ||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 143555 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 143501
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 196 bits (99), Expect = 5e-47 Identities = 138/151 (91%) Strand = Plus / Plus Query: 342 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 401 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 3449 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 3508 Query: 402 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 461 ||| | ||||||||||| || |||| ||||||| |||||||||||||| || ||||| || Sbjct: 3509 tccactaggttcgtccatggggggttagtcaggacctaagatcaggccaaacggcgtcgt 3568 Query: 462 cgatggacaacaggtcaatattcctgtacta 492 ||||||| ||||||| ||||||||||||||| Sbjct: 3569 cgatggaaaacaggttaatattcctgtacta 3599 Score = 157 bits (79), Expect = 4e-35 Identities = 172/203 (84%) Strand = Plus / Plus Query: 52 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 111 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcac 2766 Query: 112 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 171 | |||| ||||||| ||| | ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 2767 taagtggtaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccac 2826 Query: 172 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 231 |||| ||||||||||||||||||||||| | |||| ||||||| || ||| |||| Sbjct: 2827 ccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataatggccggga 2886 Query: 232 ctaagcgatctgccgaagctgtg 254 ||||| || |||||||||||||| Sbjct: 2887 ctaagtgacctgccgaagctgtg 2909
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 196 bits (99), Expect = 5e-47 Identities = 153/171 (89%) Strand = Plus / Plus Query: 322 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 381 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1369 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1428 Query: 382 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 441 |||||||||| |||| |||| ||| ||| |||||| ||| |||| ||||||| |||||| Sbjct: 1429 cccgaaaacctaagggttccaccggtagggtcgtccgcggtgggttagtcaggacctaag 1488 Query: 442 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 492 |||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1489 gccaggccgaaaggcgcagtcgatggcaaacaggtgaatattcctgtacta 1539 Score = 147 bits (74), Expect = 4e-32 Identities = 186/222 (83%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 35 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 94 |||||||||| ||||||||||| |||||| ||||||||||||||| || || ||||||| Sbjct: 1076 gtgagacgatcggggataagctcgatcgtcaagagggaaacagcccagaccatcagctaa 1135 Query: 95 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 154 |||||| ||||||| ||| |||| |||||| ||| ||| || ||| |||||||||| Sbjct: 1136 ggccccaaaatgacagctaagtggcaaaggatgtgaaaatgcgaaaacaaccaggaggtt 1195 Query: 155 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat-cgagcgcccttg 213 ||| ||||||||||| |||||||||||||||||||||||||||| | | |||| |||| Sbjct: 1196 tgctcagaagcagccatcctttaaagagtgcgtaatagctcactggtccaagcgttcttg 1255 Query: 214 cgctgaagatgaacggggctaagcgatctgccgaagctgtgg 255 ||| ||| || | |||| ||||| |||||||||||||||| Sbjct: 1256 cgccgaaaattatcgggactaagttgtctgccgaagctgtgg 1297 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,811,800 Number of Sequences: 3902068 Number of extensions: 2811800 Number of successful extensions: 50770 Number of sequences better than 10.0: 2454 Number of HSP's better than 10.0 without gapping: 2484 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 37863 Number of HSP's gapped (non-prelim): 12219 length of query: 516 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 493 effective length of database: 17,143,297,704 effective search space: 8451645768072 effective search space used: 8451645768072 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)