ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd2d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK062410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
2dbj|AB030211.1| Oryza sativa osr8 mRNA for hydrophobic polypepti... 198 1e-47
3gb|BT019258.1| Zea mays clone Contig931.F mRNA sequence 194 2e-46
4gb|AY108684.1| Zea mays PCO116945 mRNA sequence 194 2e-46
5gb|AY823550.1| Pennisetum glaucum low temperature and salt respo... 178 1e-41
6gb|AY131234.1| Triticum aestivum putative low temperature and sa... 131 2e-27
7gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome ... 115 1e-22
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
9dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
10dbj|AK121018.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 1e-22
11gb|AY107179.1| Zea mays PCO146860 mRNA sequence 115 1e-22
12gb|AY554051.1| Oryza sativa (japonica cultivar-group) drought-in... 111 2e-21
13gb|AF503583.2| Oryza sativa (indica cultivar-group) early drough... 111 2e-21
14dbj|AK119249.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
15gb|AY607690.1| Oryza sativa (japonica cultivar-group) low temper... 111 2e-21
16ref|XM_479247.1| Oryza sativa (japonica cultivar-group), mRNA 107 3e-20
17gb|AY554050.1| Oryza sativa (japonica cultivar-group) drought-in... 107 3e-20
18gb|AY177890.1| Zea mays clone BAC ZMBBb_95H21 ABA-induced gene, ... 107 3e-20
19dbj|AK121089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
20gb|AY607689.1| Oryza sativa (japonica cultivar-group) low temper... 107 3e-20
21gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
22dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
23dbj|AK070577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
24ref|XM_475521.1| Oryza sativa (japonica cultivar-group), predic... 94 5e-16
25dbj|AB161676.1| Leymus chinensis AcPMP3-1 mRNA for plasma membra... 88 3e-14
26dbj|AK099873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
27gb|DQ078765.1| Zea mays clone Zmcoi6.8 cold-inducible unknown mRNA 86 1e-13
28gb|AY111401.1| Zea mays CL37957_1 mRNA sequence 86 1e-13
29gb|AY103848.1| Zea mays PCO061754 mRNA sequence 84 5e-13
30dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
31dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
32gb|BT017793.1| Zea mays clone EL01N0504G08.c mRNA sequence 78 3e-11
33gb|AY823549.1| Pennisetum glaucum low temperature and salt respo... 76 1e-10
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
35dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
36gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome... 68 3e-08
37gb|U00966.1|U00966 Lophopyrum elongatum salt-stress induced hydr... 66 1e-07
38dbj|AB161677.1| Leymus chinensis AcPMP3-2 mRNA for plasma membra... 64 4e-07
39gb|AY105302.1| Zea mays PCO074610 mRNA sequence 60 7e-06
40dbj|AK108564.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
41ref|NM_183567.1| Oryza sativa (japonica cultivar-group), predic... 54 4e-04
42ref|XM_470667.1| Oryza sativa (japonica cultivar-group), predic... 54 4e-04
43ref|NM_184595.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
44gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 4e-04
45gb|U39649.1| Caenorhabditis elegans cosmid T23F2, complete sequence 54 4e-04
46gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 54 4e-04
47ref|NM_076534.1| Caenorhabditis elegans T23F2.4 (T23F2.4) mRNA, ... 54 4e-04
48ref|NM_076533.3| Caenorhabditis elegans T23F2.3 (T23F2.3) mRNA, ... 54 4e-04
49dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
50dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
51gb|AY177891.1| Sorghum bicolor clone BAC 8070 ABA-induced gene, ... 54 4e-04
52gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare str... 54 4e-04
53gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
54dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
55dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
56dbj|AK070872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
57dbj|AK058343.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
58dbj|AB221353.1| Triticum aestivum wpi6 gene for plasma membrane ... 50 0.007
59dbj|AB030210.1| Triticum aestivum wpi6 mRNA for hydrophobic poly... 50 0.007
60ref|NM_183563.1| Oryza sativa (japonica cultivar-group), predic... 48 0.026
61gb|AE004493.1| Pseudomonas aeruginosa PAO1, section 54 of 529 of... 48 0.026
62emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 48 0.026
63gb|AC009975.9| Homo sapiens BAC clone RP11-460M2 from 2, complet... 46 0.10
64emb|AJ310994.1|HVU310994 Hordeum vulgare lt101.1 gene for putati... 46 0.10
65emb|Z25537.1|HVBLT101 H.vulgare blt101 mRNA 46 0.10
66gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 44 0.40
67ref|XM_420246.1| PREDICTED: Gallus gallus similar to sushi-repea... 42 1.6
68gb|AE014075.1| Escherichia coli CFT073, complete genome 42 1.6
69gb|CP000243.1| Escherichia coli UTI89, complete genome 42 1.6
70gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 1.6
71dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 1.6
72gb|AC084641.1|CBRG45J09 Caenorhabditis briggsae cosmid G45J09, c... 42 1.6
73gb|AC092408.3| Papio anubis clone RP41-446H8, complete sequence 42 1.6
74ref|XM_552688.1| Anopheles gambiae str. PEST ENSANGP00000028886 ... 42 1.6
75emb|AJ310995.1|HVU310995 Hordeum vulgare lt101.2 gene for putati... 42 1.6
76gb|AY105490.1| Zea mays PCO147287 mRNA sequence 42 1.6
77gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 42 1.6
78gb|AC154269.1| Mus musculus BAC clone RP24-259B17 from 13, compl... 42 1.6
79gb|AC173209.3| Mus musculus BAC clone RP24-316K19 from chromosom... 42 1.6
80gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 1.6
81dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 1.6
82gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 42 1.6
83gb|CP000036.1| Shigella boydii Sb227, complete genome 42 1.6
84gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 6.3
85gb|AC024805.1| Caenorhabditis elegans cosmid Y51H7C, complete se... 40 6.3
86ref|XM_754159.1| Ustilago maydis 521 hypothetical protein (UM031... 40 6.3
87emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete ch... 40 6.3
88gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimy... 40 6.3
89gb|AC119676.2| Homo sapiens chromosome 1 clone RP5-820O16, compl... 40 6.3
90gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, comple... 40 6.3
91gb|AC090103.4| Homo sapiens chromosome 8, clone RP11-299D14, com... 40 6.3
92emb|CT009559.20| Mouse DNA sequence from clone RP23-66A24 on chr... 40 6.3
93gb|AE015924.1| Porphyromonas gingivalis W83, complete genome 40 6.3
94dbj|AP005899.1| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.3
95gb|AC139186.4| Mus musculus BAC clone RP24-92D20 from 8, complet... 40 6.3
96gb|AC134457.4| Mus musculus BAC clone RP23-340O18 from 10, compl... 40 6.3
97dbj|AP005263.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.3
98emb|AL929197.6| Mouse DNA sequence from clone RP23-47C18 on chro... 40 6.3
99emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chr... 40 6.3
100dbj|D64176.1|HUMNDUFV2 Human NDUFV2 gene for 24-kDa subunit of c... 40 6.3

>dbj|AK062410.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-E12, full
           insert sequence
          Length = 620

 Score =  198 bits (100), Expect = 1e-47
 Identities = 142/156 (91%)
 Strand = Plus / Plus

                                                                       
Query: 68  ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 127
           |||| ||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 63  ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 122

                                                                       
Query: 128 cctccgcttcggctgctgcagcatggagttctgcatctgcctgctgctcaccatcctcgg 187
           |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 123 cctccgcttcggatgctgcagcatggagttctgcatctgcttgcttctcaccatccttgg 182

                                               
Query: 188 ctacatccccggcatcatctacgcggtctacgtgct 223
           |||  |||| |||||||||||||| ||||| |||||
Sbjct: 183 ctatgtccctggcatcatctacgcagtctatgtgct 218



to top

>dbj|AB030211.1| Oryza sativa osr8 mRNA for hydrophobic polypeptide, complete cds
          Length = 740

 Score =  198 bits (100), Expect = 1e-47
 Identities = 142/156 (91%)
 Strand = Plus / Plus

                                                                       
Query: 68  ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 127
           |||| ||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 189 ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 248

                                                                       
Query: 128 cctccgcttcggctgctgcagcatggagttctgcatctgcctgctgctcaccatcctcgg 187
           |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 249 cctccgcttcggatgctgcagcatggagttctgcatctgcttgcttctcaccatccttgg 308

                                               
Query: 188 ctacatccccggcatcatctacgcggtctacgtgct 223
           |||  |||| |||||||||||||| ||||| |||||
Sbjct: 309 ctatgtccctggcatcatctacgcagtctatgtgct 344



to top

>gb|BT019258.1| Zea mays clone Contig931.F mRNA sequence
          Length = 610

 Score =  194 bits (98), Expect = 2e-46
 Identities = 176/202 (87%)
 Strand = Plus / Minus

                                                                       
Query: 73  gctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtcttcctcc 132
           ||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 426 gctgcaccttcctggagatcctcttcgccatcatcctcccgcccctcggcgtcttcctcc 367

                                                                       
Query: 133 gcttcggctgctgcagcatggagttctgcatctgcctgctgctcaccatcctcggctaca 192
           | |||||||||||||| || |||||||||||||||||||||||||| ||||| |||||| 
Sbjct: 366 gattcggctgctgcagaatagagttctgcatctgcctgctgctcacaatccttggctacg 307

                                                                       
Query: 193 tccccggcatcatctacgcggtctacgtgctcgtcgcgctcggctcggaggaccgcgata 252
           ||||||| |||||||||||| |||| || || || || |||| ||| ||  | | ||| |
Sbjct: 306 tccccggaatcatctacgcgatctatgtccttgttgctctcgactctgaccagcacgaga 247

                                 
Query: 253 gggactacgacacccttgctta 274
           |||| ||| |||||||||||||
Sbjct: 246 gggaatactacacccttgctta 225



to top

>gb|AY108684.1| Zea mays PCO116945 mRNA sequence
          Length = 626

 Score =  194 bits (98), Expect = 2e-46
 Identities = 176/202 (87%)
 Strand = Plus / Plus

                                                                       
Query: 73  gctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtcttcctcc 132
           ||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||||
Sbjct: 144 gctgcaccttcctggagatcctcttcgccatcatcctcccgcccctcggcgtcttcctcc 203

                                                                       
Query: 133 gcttcggctgctgcagcatggagttctgcatctgcctgctgctcaccatcctcggctaca 192
           | |||||||||||||| || |||||||||||||||||||||||||| ||||| |||||| 
Sbjct: 204 gattcggctgctgcagaatagagttctgcatctgcctgctgctcacaatccttggctacg 263

                                                                       
Query: 193 tccccggcatcatctacgcggtctacgtgctcgtcgcgctcggctcggaggaccgcgata 252
           ||||||| |||||||||||| |||| || || || || |||| ||| ||  | | ||| |
Sbjct: 264 tccccggaatcatctacgcgatctatgtccttgttgctctcgactctgaccagcacgaga 323

                                 
Query: 253 gggactacgacacccttgctta 274
           |||| ||| |||||||||||||
Sbjct: 324 gggaatactacacccttgctta 345



to top

>gb|AY823550.1| Pennisetum glaucum low temperature and salt responsive protein
           mRNA, complete cds
          Length = 520

 Score =  178 bits (90), Expect = 1e-41
 Identities = 138/154 (89%)
 Strand = Plus / Plus

                                                                       
Query: 81  ttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggc 140
           ||||| ||||||||  |||||||| |||| ||||||||||||||||||||||| ||||||
Sbjct: 72  ttcctggagatcctcctcgccatcgtcctcccgccgctcggcgtcttcctccgattcggc 131

                                                                       
Query: 141 tgctgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggc 200
           ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| || 
Sbjct: 132 tgctgcagcatggagttctgcatctgcttgctgctcacaatcctcggctatatccctgga 191

                                             
Query: 201 atcatctacgcggtctacgtgctcgtcgcgctcg 234
           || ||||||||| ||||||| || ||||| ||||
Sbjct: 192 atgatctacgcgatctacgtccttgtcgctctcg 225



to top

>gb|AY131234.1| Triticum aestivum putative low temperature and salt responsive
           protein mRNA, partial cds
          Length = 207

 Score =  131 bits (66), Expect = 2e-27
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                       
Query: 87  gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 146
           |||||||||| ||||||| |||| ||||| |||||||||| |||||||  ||||||||||
Sbjct: 13  gagatcctgtgcgccatcctcctcccgcccctcggcgtctgcctccgccacggctgctgc 72

                                                                       
Query: 147 agcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatc 206
             |||||||||||| ||| || ||||||||||||||||||||||| |||||||| || ||
Sbjct: 73  tccatggagttctggatcagcgtgctgctcaccatcctcggctacctccccggcgtcctc 132

                         
Query: 207 tacgcggtctacgt 220
           ||||| | ||||||
Sbjct: 133 tacgccgcctacgt 146



to top

>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
             OSJNBa0035B22, complete sequence
          Length = 155788

 Score =  115 bits (58), Expect = 1e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                         
Query: 68    ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 127
             |||| ||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 85816 ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 85875

                                   
Query: 128   cctccgcttcggctgctgcagc 149
             |||||||||||| |||||||||
Sbjct: 85876 cctccgcttcggatgctgcagc 85897



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                         
Query: 150   atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 209
             |||||||||||||||||| |||| ||||||||||| |||||  |||| ||||||||||||
Sbjct: 86774 atggagttctgcatctgcttgcttctcaccatccttggctatgtccctggcatcatctac 86833

                           
Query: 210   gcggtctacgtgct 223
             || ||||| |||||
Sbjct: 86834 gcagtctatgtgct 86847



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  115 bits (58), Expect = 1e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                            
Query: 68       ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 127
                |||| ||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 21880382 ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 21880441

                                      
Query: 128      cctccgcttcggctgctgcagc 149
                |||||||||||| |||||||||
Sbjct: 21880442 cctccgcttcggatgctgcagc 21880463



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 150      atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 209
                |||||||||||||||||| |||| ||||||||||| |||||  |||| ||||||||||||
Sbjct: 21881340 atggagttctgcatctgcttgcttctcaccatccttggctatgtccctggcatcatctac 21881399

                              
Query: 210      gcggtctacgtgct 223
                || ||||| |||||
Sbjct: 21881400 gcagtctatgtgct 21881413



to top

>dbj|AP005090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1065_E04
          Length = 115865

 Score =  115 bits (58), Expect = 1e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                         
Query: 68    ccggagctgcaccttcctcgagatcctgttcgccatcatcctgccgccgctcggcgtctt 127
             |||| ||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 11099 ccggtgctgcacgttcctcgagatcctgctcgccatcatcctcccgcccctcggcgtctt 11158

                                   
Query: 128   cctccgcttcggctgctgcagc 149
             |||||||||||| |||||||||
Sbjct: 11159 cctccgcttcggatgctgcagc 11180



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                         
Query: 150   atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 209
             |||||||||||||||||| |||| ||||||||||| |||||  |||| ||||||||||||
Sbjct: 12057 atggagttctgcatctgcttgcttctcaccatccttggctatgtccctggcatcatctac 12116

                           
Query: 210   gcggtctacgtgct 223
             || ||||| |||||
Sbjct: 12117 gcagtctatgtgct 12130



to top

>dbj|AK121018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B21, full
           insert sequence
          Length = 577

 Score =  115 bits (58), Expect = 1e-22
 Identities = 115/134 (85%)
 Strand = Plus / Plus

                                                                       
Query: 87  gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 146
           |||||||| | ||||||| |||| || ||||||||||||| |||||||   |||||||||
Sbjct: 85  gagatcctctgcgccatcctcctcccaccgctcggcgtctgcctccgccatggctgctgc 144

                                                                       
Query: 147 agcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatc 206
           | |||||||||||| ||  || ||||||||||||||||||| ||| |||||||| || ||
Sbjct: 145 accatggagttctggattagcgtgctgctcaccatcctcgggtacctccccggcgtcctc 204

                         
Query: 207 tacgcggtctacgt 220
           ||||| ||||||||
Sbjct: 205 tacgccgtctacgt 218



to top

>gb|AY107179.1| Zea mays PCO146860 mRNA sequence
          Length = 698

 Score =  115 bits (58), Expect = 1e-22
 Identities = 123/144 (85%), Gaps = 3/144 (2%)
 Strand = Plus / Plus

                                                                       
Query: 87  gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 146
           ||||||||| | |||||| | ||||||||| |||||||||||||||||| |||   |  |
Sbjct: 176 gagatcctgctggccatcctgctgccgccggtcggcgtcttcctccgctacgg---catc 232

                                                                       
Query: 147 agcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatc 206
            |  | |||||||| ||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 233 ggggttgagttctggatctgcctgctgctcaccatcctgggatacatcccgggcatcatc 292

                                   
Query: 207 tacgcggtctacgtgctcgtcgcg 230
           ||||| |||||||| |||||||||
Sbjct: 293 tacgccgtctacgtcctcgtcgcg 316



to top

>gb|AY554051.1| Oryza sativa (japonica cultivar-group) drought-induced hydrophobic
           protein (DRR2) mRNA, complete cds
          Length = 547

 Score =  111 bits (56), Expect = 2e-21
 Identities = 102/115 (88%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||| ||||| |||||||||||||||   ||||| ||| |  ||||| |||
Sbjct: 155 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcatg-agt 211

                                                                  
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 212 tctggatctgcctgttgctcaccttcctcggctacatccccggcatcatctacgc 266



to top

>gb|AF503583.2| Oryza sativa (indica cultivar-group) early drought induced protein
           (R1G1B) mRNA, complete cds
          Length = 649

 Score =  111 bits (56), Expect = 2e-21
 Identities = 102/115 (88%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||| ||||| |||||||||||||||   ||||| ||| |  ||||| |||
Sbjct: 180 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcatg-agt 236

                                                                  
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 237 tctggatctgcctgttgctcaccttcctcggctacatccccggcatcatctacgc 291



to top

>dbj|AK119249.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G07, full
           insert sequence
          Length = 622

 Score =  111 bits (56), Expect = 2e-21
 Identities = 102/115 (88%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||| ||||| |||||||||||||||   ||||| ||| |  ||||| |||
Sbjct: 183 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcatg-agt 239

                                                                  
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 240 tctggatctgcctgttgctcaccttcctcggctacatccccggcatcatctacgc 294



to top

>gb|AY607690.1| Oryza sativa (japonica cultivar-group) low temperature-induced low
           molecular weight integral membrane protein LTI6b mRNA,
           complete cds
          Length = 630

 Score =  111 bits (56), Expect = 2e-21
 Identities = 102/115 (88%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||| ||||| |||||||||||||||   ||||| ||| |  ||||| |||
Sbjct: 162 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcatg-agt 218

                                                                  
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 219 tctggatctgcctgttgctcaccttcctcggctacatccccggcatcatctacgc 273



to top

>ref|XM_479247.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 171

 Score =  107 bits (54), Expect = 3e-20
 Identities = 104/120 (86%), Gaps = 3/120 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           |||||||||||||||||||||||||||||||| ||   ||||||||| | |   | ||||
Sbjct: 38  tcgccatcatcctgccgccgctcggcgtcttcttcaagttcggctgcggga---ttgagt 94

                                                                       
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 216
           |||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| ||||
Sbjct: 95  tctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgctgtct 154



to top

>gb|AY554050.1| Oryza sativa (japonica cultivar-group) drought-induced hydrophobic
           protein (DRR1) mRNA, complete cds
          Length = 571

 Score =  107 bits (54), Expect = 3e-20
 Identities = 104/120 (86%), Gaps = 3/120 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           |||||||||||||||||||||||||||||||| ||   ||||||||| | |   | ||||
Sbjct: 140 tcgccatcatcctgccgccgctcggcgtcttcttcaagttcggctgcggga---ttgagt 196

                                                                       
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 216
           |||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| ||||
Sbjct: 197 tctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgctgtct 256



to top

>gb|AY177890.1| Zea mays clone BAC ZMBBb_95H21 ABA-induced gene, partial sequence
          Length = 2248

 Score =  107 bits (54), Expect = 3e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                        
Query: 153  gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 212
            |||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||| 
Sbjct: 1172 gagttctggatctgcctgctgctcaccatcctgggatacatcccgggcatcatctacgcc 1231

                              
Query: 213  gtctacgtgctcgtcgcg 230
            |||||||| |||||||||
Sbjct: 1232 gtctacgtcctcgtcgcg 1249



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 87   gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccg 133
            ||||||||| | |||||| | ||||||||| ||||||||||||||||
Sbjct: 1109 gagatcctgctggccatcctgctgccgccggtcggcgtcttcctccg 1155



to top

>dbj|AK121089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065L15, full
           insert sequence
          Length = 636

 Score =  107 bits (54), Expect = 3e-20
 Identities = 104/120 (86%), Gaps = 3/120 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           |||||||||||||||||||||||||||||||| ||   ||||||||| | |   | ||||
Sbjct: 165 tcgccatcatcctgccgccgctcggcgtcttcttcaagttcggctgcggga---ttgagt 221

                                                                       
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 216
           |||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| ||||
Sbjct: 222 tctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgctgtct 281



to top

>gb|AY607689.1| Oryza sativa (japonica cultivar-group) low temperature-induced low
           molecular weight integral membrane protein LTI6a mRNA,
           complete cds
          Length = 616

 Score =  107 bits (54), Expect = 3e-20
 Identities = 104/120 (86%), Gaps = 3/120 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           |||||||||||||||||||||||||||||||| ||   ||||||||| | |   | ||||
Sbjct: 150 tcgccatcatcctgccgccgctcggcgtcttcttcaagttcggctgcggga---ttgagt 206

                                                                       
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 216
           |||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| ||||
Sbjct: 207 tctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgctgtct 266



to top

>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0069I13, complete sequence
          Length = 94252

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 64/68 (94%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                         
Query: 144   tgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatc 203
             ||||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 29098 tgcagcatg-agttctggatctgcctgttgctcaccttcctcggctacatccccggcatc 29040

                     
Query: 204   atctacgc 211
             ||||||||
Sbjct: 29039 atctacgc 29032



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 97    tcgccatcatcctgccgccgctcggcgtcttcctc 131
             ||||||||||||| ||||| |||||||||||||||
Sbjct: 29259 tcgccatcatcctcccgcccctcggcgtcttcctc 29225



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 64/68 (94%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                           
Query: 144     tgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatc 203
               ||||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 2159869 tgcagcatg-agttctggatctgcctgttgctcaccttcctcggctacatccccggcatc 2159811

                       
Query: 204     atctacgc 211
               ||||||||
Sbjct: 2159810 atctacgc 2159803



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                           
Query: 150     atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 209
               ||||||||||| |||  |||||||||||||||||| || ||| | |||||||||||||||
Sbjct: 1186322 atggagttctggatcgccctgctgctcaccatcctgggatacttacccggcatcatctac 1186263

                 
Query: 210     gc 211
               ||
Sbjct: 1186262 gc 1186261



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                         
Query: 99      gccatcatcctgccgccgctcggcgtcttcctccgcttcggc 140
               |||||| | |||||||||||||||||||||||||||| ||||
Sbjct: 1186442 gccatcctgctgccgccgctcggcgtcttcctccgctacggc 1186401



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                  
Query: 97      tcgccatcatcctgccgccgctcggcgtcttcctc 131
               ||||||||||||| ||||| |||||||||||||||
Sbjct: 2160030 tcgccatcatcctcccgcccctcggcgtcttcctc 2159996



to top

>dbj|AK070577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057O07, full
           insert sequence
          Length = 1507

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 64/68 (94%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                       
Query: 144 tgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatc 203
           ||||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 350 tgcagcatg-agttctggatctgcctgttgctcaccttcctcggctacatccccggcatc 408

                   
Query: 204 atctacgc 211
           ||||||||
Sbjct: 409 atctacgc 416



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctc 131
           ||||||||||||| ||||| |||||||||||||||
Sbjct: 189 tcgccatcatcctcccgcccctcggcgtcttcctc 223



to top

>ref|XM_475521.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 165

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 97/113 (85%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                       
Query: 99  gccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagttc 158
           |||||| | |||||||||||||||||||||||||||| ||||  | |||   ||||||||
Sbjct: 34  gccatcctgctgccgccgctcggcgtcttcctccgctacggcatcggca---tggagttc 90

                                                                
Query: 159 tgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           || |||  |||||||||||||||||| || ||| | |||||||||||||||||
Sbjct: 91  tggatcgccctgctgctcaccatcctgggatacttacccggcatcatctacgc 143



to top

>dbj|AB161676.1| Leymus chinensis AcPMP3-1 mRNA for plasma membrane protein 3,
           complete cds
          Length = 579

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 99/115 (86%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||| ||||| |||||||||||||||   ||||||||| |  ||||| |||
Sbjct: 110 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggctgcgg--gcatg-agt 166

                                                                  
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           |||| ||||||||  |||||||| ||||||| |||||||| || |||||||||||
Sbjct: 167 tctggatctgcctcttgctcaccttcctcgggtacatcccgggtatcatctacgc 221



to top

>dbj|AK099873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G21, full
           insert sequence
          Length = 1039

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 63/68 (92%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                       
Query: 144 tgcagcatggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatc 203
           ||||||||| ||||||| |||||| || |||||||| |||||||||||||||||||||||
Sbjct: 353 tgcagcatg-agttctggatctgcttgttgctcaccttcctcggctacatccccggcatc 411

                   
Query: 204 atctacgc 211
           ||||||||
Sbjct: 412 atctacgc 419



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctc 131
           ||||||||||||| ||||| |||||||||||||||
Sbjct: 192 tcgccatcatcctcccgcccctcggcgtcttcctc 226



to top

>gb|DQ078765.1| Zea mays clone Zmcoi6.8 cold-inducible unknown mRNA
          Length = 220

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                      
Query: 153 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           |||||||| |||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct: 15  gagttctggatctgcctcctcctcaccttcctcggctacatccccggcatcatctacgc 73



to top

>gb|AY111401.1| Zea mays CL37957_1 mRNA sequence
          Length = 478

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                      
Query: 153 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           |||||||| |||||||| || |||||| |||||||||||||||||||||||||||||||
Sbjct: 311 gagttctggatctgcctcctcctcaccttcctcggctacatccccggcatcatctacgc 253



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 90  atcctgttcgccatcatcctgccgccgct 118
           |||||| |||||||||||||||| |||||
Sbjct: 371 atcctgatcgccatcatcctgcctccgct 343



to top

>gb|AY103848.1| Zea mays PCO061754 mRNA sequence
          Length = 846

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 101/120 (84%), Gaps = 3/120 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||||||||||||||| |||||| ||   ||||||||| |     | ||||
Sbjct: 176 tcgccatcatcctgccgccgctcggggtcttcttcaagttcggctgcgggg---ttgagt 232

                                                                       
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 216
           |||| ||||||||  | |||||| ||||||||||| ||||||||||||||||||| ||||
Sbjct: 233 tctggatctgccttatcctcaccttcctcggctacctccccggcatcatctacgccgtct 292



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                            
Query: 153      gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 212
                |||||||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| 
Sbjct: 26350425 gagttctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgct 26350484

                    
Query: 213      gtct 216
                ||||
Sbjct: 26350485 gtct 26350488



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                                
Query: 97       tcgccatcatcctgccgccgctcggcgtcttc 128
                ||||||||||||||||||||||||||||||||
Sbjct: 26350257 tcgccatcatcctgccgccgctcggcgtcttc 26350288



to top

>dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1136_D11
          Length = 109399

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                        
Query: 153  gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 212
            |||||||| |||||| ||||||||||| || |||||||| ||||||||||||||||||| 
Sbjct: 4665 gagttctggatctgcttgctgctcaccttcttcggctacctccccggcatcatctacgct 4724

                
Query: 213  gtct 216
            ||||
Sbjct: 4725 gtct 4728



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                            
Query: 97   tcgccatcatcctgccgccgctcggcgtcttc 128
            ||||||||||||||||||||||||||||||||
Sbjct: 4497 tcgccatcatcctgccgccgctcggcgtcttc 4528



to top

>gb|BT017793.1| Zea mays clone EL01N0504G08.c mRNA sequence
          Length = 472

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                      
Query: 153 gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           |||||||| |||||||| || |||||| ||||||||||||||||||||||||| |||||
Sbjct: 174 gagttctggatctgcctcctcctcaccttcctcggctacatccccggcatcatttacgc 232



to top

>gb|AY823549.1| Pennisetum glaucum low temperature and salt responsive protein
           mRNA, complete cds
          Length = 565

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 100/120 (83%), Gaps = 3/120 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||||||||||||||| |||||| ||   ||||||||| |     | ||||
Sbjct: 175 tcgccatcatcctgccgccgctcggggtcttcttcaagttcggctgcgggg---ttgagt 231

                                                                       
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 216
           |||| ||||||||  | |||||| || |||||||| ||||||||||||||||||| ||||
Sbjct: 232 tctggatctgcctcgtcctcaccttcttcggctacctccccggcatcatctacgccgtct 291



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                           
Query: 150     atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 209
               ||||||||||| ||  || ||||||||||||||||||| ||| |||||||| || |||||
Sbjct: 4275670 atggagttctggattagcgtgctgctcaccatcctcgggtacctccccggcgtcctctac 4275611

                          
Query: 210     gcggtctacgt 220
               || ||||||||
Sbjct: 4275610 gccgtctacgt 4275600



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 111      ccgccgctcggcgtcttcctccgcttcggctgctgcagc 149
                |||||||||||||||||| |||||| ||||| |||||||
Sbjct: 26293258 ccgccgctcggcgtcttcttccgctacggcttctgcagc 26293296



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                           
Query: 87      gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 146
               |||||||| | ||||||| |||| || ||||||||||||| |||||||   |||||||||
Sbjct: 4275848 gagatcctctgcgccatcctcctcccaccgctcggcgtctgcctccgccatggctgctgc 4275789

                
Query: 147     a 147
               |
Sbjct: 4275788 a 4275788



to top

>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0554A06
          Length = 165311

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                          
Query: 150    atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 209
              ||||||||||| ||  || ||||||||||||||||||| ||| |||||||| || |||||
Sbjct: 120891 atggagttctggattagcgtgctgctcaccatcctcgggtacctccccggcgtcctctac 120832

                         
Query: 210    gcggtctacgt 220
              || ||||||||
Sbjct: 120831 gccgtctacgt 120821



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                          
Query: 87     gagatcctgttcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgc 146
              |||||||| | ||||||| |||| || ||||||||||||| |||||||   |||||||||
Sbjct: 121069 gagatcctctgcgccatcctcctcccaccgctcggcgtctgcctccgccatggctgctgc 121010

               
Query: 147    a 147
              |
Sbjct: 121009 a 121009



to top

>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02,
             complete sequence
          Length = 90509

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 150   atggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctac 209
             ||||||||||| |||  |||||||||||||||||| || ||| | |||||||||||||||
Sbjct: 36608 atggagttctggatcgccctgctgctcaccatcctgggatacttacccggcatcatctac 36549

               
Query: 210   gc 211
             ||
Sbjct: 36548 gc 36547



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                       
Query: 99    gccatcatcctgccgccgctcggcgtcttcctccgcttcggc 140
             |||||| | |||||||||||||||||||||||||||| ||||
Sbjct: 36728 gccatcctgctgccgccgctcggcgtcttcctccgctacggc 36687



to top

>gb|U00966.1|U00966 Lophopyrum elongatum salt-stress induced hydrophobic peptide (ESI3)
           gene, complete cds
          Length = 652

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                       
Query: 151 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 210
           |||||||||| ||||| ||  |||| ||||| ||||||||||| || || ||||||||||
Sbjct: 283 tggagttctggatctgtctcttgctgaccatactcggctacataccggggatcatctacg 342

                        
Query: 211 cggtctacgtgct 223
           |||| ||||||||
Sbjct: 343 cggtgtacgtgct 355



to top

>dbj|AB161677.1| Leymus chinensis AcPMP3-2 mRNA for plasma membrane protein 3,
           complete cds
          Length = 513

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||| ||||| |||||||||||||||   ||||| ||| |  |||| ||||
Sbjct: 113 tcgccatcatcctcccgcccctcggcgtcttcctcaagttcggatgcgg--gcat-gagt 169

                                                                  
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           |||| ||||||||  |||||||| ||||||| | |||||| || || ||||||||
Sbjct: 170 tctggatctgcctcttgctcaccttcctcgggttcatcccgggtattatctacgc 224



to top

>gb|AY105302.1| Zea mays PCO074610 mRNA sequence
          Length = 553

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 95/116 (81%), Gaps = 3/116 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||| ||||| |||||||||||||||   ||||   ||||||   | || |
Sbjct: 103 tcgccatcatcctcccgcctctcggcgtcttcctcaagttcg---gctgcaaggtcgaat 159

                                                                   
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 212
           ||||  ||||||| ||||||||| |||||| |||  ||||||| ||||||||||||
Sbjct: 160 tctggctctgcctcctgctcaccttcctcgcctatctccccgggatcatctacgcg 215



to top

>dbj|AK108564.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-C08, full
           insert sequence
          Length = 850

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 111 ccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagttc 158
           |||||||||||||||||| |||||| ||||| |||||||  |||||||
Sbjct: 215 ccgccgctcggcgtcttcttccgctacggcttctgcagctcggagttc 262



to top

>ref|NM_183567.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1614

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 98/121 (80%), Gaps = 3/121 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgctgcagcatggagt 156
           ||||||||||||| || || |||||||||||||||   ||||   | ||||   ||||||
Sbjct: 38  tcgccatcatcctccctcctctcggcgtcttcctcaagttcg---gatgcaaggtggagt 94

                                                                       
Query: 157 tctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcggtct 216
           ||||  |||| || ||||||||| || |||||||  |||| || ||||||||||||||||
Sbjct: 95  tctggctctgtcttctgctcaccttcttcggctatctcccggggatcatctacgcggtct 154

            
Query: 217 a 217
           |
Sbjct: 155 a 155



to top

>ref|XM_470667.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 165

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 99  gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 141
           |||||| ||||||||||| ||||||||||||| |||| |||||
Sbjct: 34  gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 76



to top

>ref|NM_184595.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 195

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctc 131
           |||||||||||||||| || |||||||||||||||
Sbjct: 59  tcgccatcatcctgcctcccctcggcgtcttcctc 93



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 97       tcgccatcatcctgccgccgctcggcgtcttcctc 131
                |||||||||||||||| || |||||||||||||||
Sbjct: 14387650 tcgccatcatcctgcctcccctcggcgtcttcctc 14387616



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                          
Query: 99      gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 141
               |||||| ||||||||||| ||||||||||||| |||| |||||
Sbjct: 9872244 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 9872202



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                            
Query: 153      gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 212
                |||||||| ||||||||  |||||||  || | |||||| |||| || ||||||||||| 
Sbjct: 14387466 gagttctggatctgcctcttgctcacattcttgggctacttcccggggatcatctacgcc 14387407

                    
Query: 213      gtct 216
                ||||
Sbjct: 14387406 gtct 14387403



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                   
Query: 172     tgctcaccatcctcggctacatccccggcatcatctacgcggtctacgtgct 223
               |||| ||||| || || |||||||| || |||||||||||||| || |||||
Sbjct: 9872050 tgctgaccatactgggatacatcccggggatcatctacgcggtgtatgtgct 9871999



to top

>gb|U39649.1| Caenorhabditis elegans cosmid T23F2, complete sequence
          Length = 26527

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 161   catctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
             ||||||| | |||||||| || ||||||||||| ||||| |||||||||||
Sbjct: 22624 catctgcattctgctcacaattctcggctacattcccggaatcatctacgc 22574



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 161   catctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
             ||||||| | |||||||||||||| || ||||| || ||||||||||||||
Sbjct: 19889 catctgcattctgctcaccatcctgggatacattccaggcatcatctacgc 19839



to top

>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
              sequence
          Length = 158714

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 97     tcgccatcatcctgccgccgctcggcgtcttcctc 131
              |||||||||||||||| || |||||||||||||||
Sbjct: 136879 tcgccatcatcctgcctcccctcggcgtcttcctc 136845



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                          
Query: 153    gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 212
              |||||||| ||||||||  |||||||  || | |||||| |||| || ||||||||||| 
Sbjct: 136695 gagttctggatctgcctcttgctcacattcttgggctacttcccggggatcatctacgcc 136636

                  
Query: 213    gtct 216
              ||||
Sbjct: 136635 gtct 136632



to top

>ref|NM_076534.1| Caenorhabditis elegans T23F2.4 (T23F2.4) mRNA, complete cds
          Length = 234

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 161 catctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           ||||||| | |||||||| || ||||||||||| ||||| |||||||||||
Sbjct: 159 catctgcattctgctcacaattctcggctacattcccggaatcatctacgc 209



to top

>ref|NM_076533.3| Caenorhabditis elegans T23F2.3 (T23F2.3) mRNA, complete cds
          Length = 295

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 161 catctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           ||||||| | |||||||||||||| || ||||| || ||||||||||||||
Sbjct: 122 catctgcattctgctcaccatcctgggatacattccaggcatcatctacgc 172



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 97       tcgccatcatcctgccgccgctcggcgtcttcctc 131
                |||||||||||||||| || |||||||||||||||
Sbjct: 14382625 tcgccatcatcctgcctcccctcggcgtcttcctc 14382591



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                          
Query: 99      gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 141
               |||||| ||||||||||| ||||||||||||| |||| |||||
Sbjct: 9870365 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 9870323



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                            
Query: 153      gagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgcg 212
                |||||||| ||||||||  |||||||  || | |||||| |||| || ||||||||||| 
Sbjct: 14382441 gagttctggatctgcctcttgctcacattcttgggctacttcccggggatcatctacgcc 14382382

                    
Query: 213      gtct 216
                ||||
Sbjct: 14382381 gtct 14382378



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                   
Query: 172     tgctcaccatcctcggctacatccccggcatcatctacgcggtctacgtgct 223
               |||| ||||| || || |||||||| || |||||||||||||| || |||||
Sbjct: 9870171 tgctgaccatactgggatacatcccggggatcatctacgcggtgtatgtgct 9870120



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                            
Query: 151      tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 210
                ||||||||||  |||| || ||||||||| || |||||||  |||| || ||||||||||
Sbjct: 10331873 tggagttctggctctgtcttctgctcaccttcttcggctatctcccggggatcatctacg 10331932

                       
Query: 211      cggtcta 217
                |||||||
Sbjct: 10331933 cggtcta 10331939



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                            
Query: 152      ggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
                ||||||||| |||||||| || ||||||  |||||||||  | || ||||||||||||||
Sbjct: 10317866 ggagttctggatctgccttctcctcacctgcctcggctatcttccgggcatcatctacgc 10317925



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 97       tcgccatcatcctgccgccgctcggcgtcttcctc 131
                ||||||||||||| || || |||||||||||||||
Sbjct: 10331669 tcgccatcatcctccctcctctcggcgtcttcctc 10331703



to top

>gb|AY177891.1| Sorghum bicolor clone BAC 8070 ABA-induced gene, partial sequence
          Length = 3374

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 97   tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggctgc 143
            |||||||| |||| |||||| ||||||||||||| |||| |||||||
Sbjct: 2024 tcgccatcttcctcccgccggtcggcgtcttcctgcgctacggctgc 2070



to top

>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0022M22, from chromosome 3, complete sequence
          Length = 124166

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 99    gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 141
             |||||| ||||||||||| ||||||||||||| |||| |||||
Sbjct: 34633 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 34591



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 172   tgctcaccatcctcggctacatccccggcatcatctacgcggtctacgtgct 223
             |||| ||||| || || |||||||| || |||||||||||||| || |||||
Sbjct: 34439 tgctgaccatactgggatacatcccggggatcatctacgcggtgtatgtgct 34388



to top

>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0013D02, complete sequence
          Length = 131883

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 99   gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 141
            |||||| ||||||||||| ||||||||||||| |||| |||||
Sbjct: 2253 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 2295



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 172  tgctcaccatcctcggctacatccccggcatcatctacgcggtctacgtgct 223
            |||| ||||| || || |||||||| || |||||||||||||| || |||||
Sbjct: 2447 tgctgaccatactgggatacatcccggggatcatctacgcggtgtatgtgct 2498



to top

>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0511C01
          Length = 170402

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                         
Query: 151   tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 210
             ||||||||||  |||| || ||||||||| || |||||||  |||| || ||||||||||
Sbjct: 38593 tggagttctggctctgtcttctgctcaccttcttcggctatctcccggggatcatctacg 38652

                    
Query: 211   cggtcta 217
             |||||||
Sbjct: 38653 cggtcta 38659



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                         
Query: 152   ggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
             ||||||||| |||||||| || ||||||  |||||||||  | || ||||||||||||||
Sbjct: 24586 ggagttctggatctgccttctcctcacctgcctcggctatcttccgggcatcatctacgc 24645



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 97    tcgccatcatcctgccgccgctcggcgtcttcctc 131
             ||||||||||||| || || |||||||||||||||
Sbjct: 38389 tcgccatcatcctccctcctctcggcgtcttcctc 38423



to top

>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0453H04
          Length = 175047

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 111    ccgccgctcggcgtcttcctccgcttcggctgctgcagc 149
              |||||||||||||||||| |||||| ||||| |||||||
Sbjct: 157798 ccgccgctcggcgtcttcttccgctacggcttctgcagc 157836



to top

>dbj|AK070872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023071K01, full
           insert sequence
          Length = 488

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 99  gccatcatcctgccgccgctcggcgtcttcctccgcttcggct 141
           |||||| ||||||||||| ||||||||||||| |||| |||||
Sbjct: 129 gccatcttcctgccgccggtcggcgtcttcctgcgctacggct 171



to top

>dbj|AK058343.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D10, full
           insert sequence
          Length = 590

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 151 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 210
           ||||||||||  |||| || ||||||||| || |||||||  |||| || ||||||||||
Sbjct: 12  tggagttctggctctgtcttctgctcaccttcttcggctatctcccggggatcatctacg 71

                  
Query: 211 cggtcta 217
           |||||||
Sbjct: 72  cggtcta 78



to top

>dbj|AB221353.1| Triticum aestivum wpi6 gene for plasma membrane protein, complete
           cds
          Length = 596

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 151 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 210
           |||||||||| ||||| ||  |||| ||||| || || ||||| || || ||||||||||
Sbjct: 252 tggagttctggatctgtctcttgctgaccatactggggtacataccggggatcatctacg 311

                        
Query: 211 cggtctacgtgct 223
           |||| ||||||||
Sbjct: 312 cggtgtacgtgct 324



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgct 135
           |||||||||||||||| ||  ||||||||||||| ||||
Sbjct: 103 tcgccatcatcctgcctcccgtcggcgtcttcctgcgct 141



to top

>dbj|AB030210.1| Triticum aestivum wpi6 mRNA for hydrophobic polypeptide, complete
           cds
          Length = 507

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 151 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 210
           |||||||||| ||||| ||  |||| ||||| || || ||||| || || ||||||||||
Sbjct: 132 tggagttctggatctgtctcttgctgaccatactggggtacataccggggatcatctacg 191

                        
Query: 211 cggtctacgtgct 223
           |||| ||||||||
Sbjct: 192 cggtgtacgtgct 204



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgct 135
           |||||||||||||||| ||  ||||||||||||| ||||
Sbjct: 81  tcgccatcatcctgcctcccgtcggcgtcttcctgcgct 119



to top

>ref|NM_183563.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1110

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 152 ggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacgc 211
           ||||||||| |||||||| || ||||||  |||||||||  | || ||||||||||||||
Sbjct: 85  ggagttctggatctgccttctcctcacctgcctcggctatcttccgggcatcatctacgc 26



to top

>gb|AE004493.1| Pseudomonas aeruginosa PAO1, section 54 of 529 of the complete
           genome
          Length = 11746

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 171 ctgctcaccatcctcggctacatccccggcatcatctacgcggt 214
           ||||||||| | |||||||||||||| |||||| || |||||||
Sbjct: 218 ctgctcaccctgctcggctacatcccgggcatcgtccacgcggt 261



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcct 130
           |||||||| ||||||||||||| ||||| |||||
Sbjct: 147 tcgccatcctcctgccgccgctgggcgtgttcct 180



to top

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 97      tcgccatcatcctgccgccgctcggcgtcttcctcc 132
               |||||||||||||||||||||| || || |||||||
Sbjct: 5424435 tcgccatcatcctgccgccgctgggggtgttcctcc 5424400



to top

>gb|AC009975.9| Homo sapiens BAC clone RP11-460M2 from 2, complete sequence
          Length = 211305

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 371    ccttctttctgtgagtctgtaaa 393
              |||||||||||||||||||||||
Sbjct: 140202 ccttctttctgtgagtctgtaaa 140224



to top

>emb|AJ310994.1|HVU310994 Hordeum vulgare lt101.1 gene for putative membrane protein
          Length = 2288

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 97   tcgccatcatcctgccgccgctcggcgtcttcctccgct 135
            |||||||||| ||||| ||| ||||||||||||| ||||
Sbjct: 1443 tcgccatcattctgccaccggtcggcgtcttcctgcgct 1481



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                        
Query: 151  tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 210
            |||||||||| ||||| ||  |||| ||||| || || ||||| || || ||||||||||
Sbjct: 1611 tggagttctggatctgtctcttgctgaccattctggggtacataccggggatcatctacg 1670

                         
Query: 211  cggtctacgtgct 223
            |||| || |||||
Sbjct: 1671 cggtgtatgtgct 1683



to top

>emb|Z25537.1|HVBLT101 H.vulgare blt101 mRNA
          Length = 521

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgct 135
           |||||||||| ||||| ||| ||||||||||||| ||||
Sbjct: 78  tcgccatcattctgccaccggtcggcgtcttcctgcgct 116



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                       
Query: 151 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 210
           |||||||||| ||||| ||  |||| ||||| || || ||||| || || ||||||||||
Sbjct: 129 tggagttctggatctgtctcttgctgaccattctggggtacataccggggatcatctacg 188

                        
Query: 211 cggtctacgtgct 223
           |||| || |||||
Sbjct: 189 cggtgtatgtgct 201



to top

>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 189     tacatccccggcatcatctacgcggtctac 218
               |||||||||||||||||| ||||| |||||
Sbjct: 5542430 tacatccccggcatcatccacgcgatctac 5542401



to top

>ref|XM_420246.1| PREDICTED: Gallus gallus similar to sushi-repeat protein (LOC422261),
            mRNA
          Length = 2261

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 141  tgctgcagcatggagttctgcatct 165
            ||||||||||||||| |||||||||
Sbjct: 1442 tgctgcagcatggagatctgcatct 1418



to top

>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 100     ccatcatcctgccgccgctcggcgt 124
               ||||||| |||||||||||||||||
Sbjct: 3075674 ccatcattctgccgccgctcggcgt 3075650



to top

>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 100     ccatcatcctgccgccgctcggcgt 124
               ||||||| |||||||||||||||||
Sbjct: 2951862 ccatcattctgccgccgctcggcgt 2951838



to top

>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 100     ccatcatcctgccgccgctcggcgt 124
               ||||||| |||||||||||||||||
Sbjct: 2795025 ccatcattctgccgccgctcggcgt 2795001



to top

>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 100     ccatcatcctgccgccgctcggcgt 124
               ||||||| |||||||||||||||||
Sbjct: 2795659 ccatcattctgccgccgctcggcgt 2795635



to top

>gb|AC084641.1|CBRG45J09 Caenorhabditis briggsae cosmid G45J09, complete sequence
          Length = 46744

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 171   ctgctcaccatcctcggctacatccccggcatcatctacgc 211
             ||||||||||| ||||| |||||||| || |||||| ||||
Sbjct: 14952 ctgctcaccattctcggatacatcccaggaatcatccacgc 14992



to top

>gb|AC092408.3| Papio anubis clone RP41-446H8, complete sequence
          Length = 184036

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   tgctcaccatcctcggctaca 192
             |||||||||||||||||||||
Sbjct: 90056 tgctcaccatcctcggctaca 90076



to top

>ref|XM_552688.1| Anopheles gambiae str. PEST ENSANGP00000028886 (ENSANGG00000024588),
            partial mRNA
          Length = 3639

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 230  gctcggctcggaggaccgcga 250
            |||||||||||||||||||||
Sbjct: 1767 gctcggctcggaggaccgcga 1787



to top

>emb|AJ310995.1|HVU310995 Hordeum vulgare lt101.2 gene for putative membrane protein
          Length = 3081

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                       
Query: 151 tggagttctgcatctgcctgctgctcaccatcctcggctacatccccggcatcatctacg 210
           |||||||||| ||||| ||  |||| ||| | || || ||||| || || ||||||||||
Sbjct: 634 tggagttctggatctgtctcttgctgaccctactggggtacataccggggatcatctacg 693

                        
Query: 211 cggtctacgtgct 223
           |||| ||||||||
Sbjct: 694 cggtgtacgtgct 706



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 97  tcgccatcatcctgccgccgctcggcgtcttcctccgcttcggc 140
           |||||||||||||||| ||  | ||||||||||| |||| ||||
Sbjct: 502 tcgccatcatcctgcctccagtaggcgtcttcctgcgctacggc 545



to top

>gb|AY105490.1| Zea mays PCO147287 mRNA sequence
          Length = 727

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 113 gccgctcggcgtcttcctccgcttc 137
           ||||||||||||||||||| |||||
Sbjct: 364 gccgctcggcgtcttcctcggcttc 388



to top

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 166     gcctgctgctcaccatcctcg 186
               |||||||||||||||||||||
Sbjct: 2274819 gcctgctgctcaccatcctcg 2274839



to top

>gb|AC154269.1| Mus musculus BAC clone RP24-259B17 from 13, complete sequence
          Length = 170931

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   gcttcggctgctgcagcatgg 153
             |||||||||||||||||||||
Sbjct: 46886 gcttcggctgctgcagcatgg 46866



to top

>gb|AC173209.3| Mus musculus BAC clone RP24-316K19 from chromosome 13, complete
             sequence
          Length = 179701

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   gcttcggctgctgcagcatgg 153
             |||||||||||||||||||||
Sbjct: 31649 gcttcggctgctgcagcatgg 31669



to top

>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 100     ccatcatcctgccgccgctcggcgt 124
               ||||||| |||||||||||||||||
Sbjct: 3586480 ccatcattctgccgccgctcggcgt 3586456



to top

>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 100     ccatcatcctgccgccgctcggcgt 124
               ||||||| |||||||||||||||||
Sbjct: 3519190 ccatcattctgccgccgctcggcgt 3519166



to top

>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 100     ccatcatcctgccgccgctcggcgt 124
               ||||||| |||||||||||||||||
Sbjct: 2645127 ccatcattctgccgccgctcggcgt 2645103



to top

>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 100     ccatcatcctgccgccgctcggcgt 124
               ||||||| |||||||||||||||||
Sbjct: 2857303 ccatcattctgccgccgctcggcgt 2857327



to top

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 171     ctgctcaccatcctcggctacatccccggcat 202
               ||||| ||||||||||| ||||| ||||||||
Sbjct: 1811017 ctgctgaccatcctcggttacattcccggcat 1810986



to top

>gb|AC024805.1| Caenorhabditis elegans cosmid Y51H7C, complete sequence
          Length = 68661

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   gaataaatttcagctctgaa 458
             ||||||||||||||||||||
Sbjct: 25004 gaataaatttcagctctgaa 24985



to top

>ref|XM_754159.1| Ustilago maydis 521 hypothetical protein (UM03105.1) partial mRNA
          Length = 1884

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 cctccgcttcggctgctgca 147
           ||||||||||||||||||||
Sbjct: 47  cctccgcttcggctgctgca 66



to top

>emb|AL591793.1|SME591793 Sinorhizobium meliloti 1021 complete chromosome; segment 12/12
          Length = 273785

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    tcatcctgccgccgctcggc 122
              ||||||||||||||||||||
Sbjct: 149039 tcatcctgccgccgctcggc 149058



to top

>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide
             biosynthetic gene cluster, complete sequence
          Length = 86941

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   acgtgctcgtcgcgctcggc 236
             ||||||||||||||||||||
Sbjct: 35205 acgtgctcgtcgcgctcggc 35224



to top

>gb|AC119676.2| Homo sapiens chromosome 1 clone RP5-820O16, complete sequence
          Length = 160573

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 144    tgcagcatggagttctgcatctgc 167
              ||||| ||||||||||||||||||
Sbjct: 146284 tgcaggatggagttctgcatctgc 146261



to top

>gb|AC080043.5| Homo sapiens chromosome , clone RP11-45M9, complete sequence
          Length = 161443

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    catctgcctgctgctcacca 180
              ||||||||||||||||||||
Sbjct: 144695 catctgcctgctgctcacca 144714



to top

>gb|AC090103.4| Homo sapiens chromosome 8, clone RP11-299D14, complete sequence
          Length = 161925

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   catctgcctgctgctcacca 180
             ||||||||||||||||||||
Sbjct: 66398 catctgcctgctgctcacca 66417



to top

>emb|CT009559.20| Mouse DNA sequence from clone RP23-66A24 on chromosome 14, complete
            sequence
          Length = 78271

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  atggagttctgcatctgcct 169
            ||||||||||||||||||||
Sbjct: 4499 atggagttctgcatctgcct 4480



to top

>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     cccccgatccgatccgagat 53
              ||||||||||||||||||||
Sbjct: 663718 cccccgatccgatccgagat 663699



to top

>dbj|AP005899.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-143J12, complete
              sequence
          Length = 155671

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     gcgtcccggagctgcacctt 82
              ||||||||||||||||||||
Sbjct: 136591 gcgtcccggagctgcacctt 136572



to top

>gb|AC139186.4| Mus musculus BAC clone RP24-92D20 from 8, complete sequence
          Length = 206436

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   gcatctgcctgctgctcacc 179
             ||||||||||||||||||||
Sbjct: 45879 gcatctgcctgctgctcacc 45860



to top

>gb|AC134457.4| Mus musculus BAC clone RP23-340O18 from 10, complete sequence
          Length = 186273

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   gaataaatttcagctctgaa 458
             ||||||||||||||||||||
Sbjct: 71000 gaataaatttcagctctgaa 70981



to top

>dbj|AP005263.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-21J18, complete
             sequence
          Length = 154926

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    gcgtcccggagctgcacctt 82
             ||||||||||||||||||||
Sbjct: 49486 gcgtcccggagctgcacctt 49467



to top

>emb|AL929197.6| Mouse DNA sequence from clone RP23-47C18 on chromosome 2, complete
             sequence
          Length = 46845

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   gacgctgtgtgtttccatat 355
             ||||||||||||||||||||
Sbjct: 24168 gacgctgtgtgtttccatat 24187



to top

>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete
              sequence
          Length = 217775

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    ttctttctgtgagtctgtaa 392
              ||||||||||||||||||||
Sbjct: 124567 ttctttctgtgagtctgtaa 124548



to top

>dbj|D64176.1|HUMNDUFV2 Human NDUFV2 gene for 24-kDa subunit of complex I, exon 1
          Length = 780

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  gcgtcccggagctgcacctt 82
           ||||||||||||||||||||
Sbjct: 179 gcgtcccggagctgcacctt 160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,203,426
Number of Sequences: 3902068
Number of extensions: 3203426
Number of successful extensions: 67895
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67125
Number of HSP's gapped (non-prelim): 767
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top