ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd2d09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence Length = 1457 Score = 531 bits (268), Expect = e-148 Identities = 499/576 (86%) Strand = Plus / Plus Query: 26 tcggcgaggatggaaatgctcttcagcagcctgttctgtgactcagcgtcatcggagaac 85 |||||||||||||||||| | ||| ||||| | || |||| ||||| |||||| ||| | Sbjct: 61 tcggcgaggatggaaatgtttttcggcagctttctcagtgaatcagcatcatcgcagagc 120 Query: 86 ttttctggccatcccggtgttgagagatgcccattcctgaggaacatcaatggagccaca 145 ||| |||| || | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 121 cttttcagccacccggatgttgagagatgcccattcctgaggaacatcaatggagctaca 180 Query: 146 accttttcattttcttctgctttgcctgtagctgcccggggaggcaagggtccgatcttt 205 |||||||| || ||||||||||||| ||||||||||| |||||||||||||| || ||| Sbjct: 181 accttttccttcacttctgctttgccagtagctgcccgaggaggcaagggtccaattttt 240 Query: 206 gaggatggaccaggctttgagtcggcattcaagcttttccatggacaggatgggatagtc 265 |||||||||||||| |||||||| |||||||||||||||||||| | ||||| ||||| Sbjct: 241 gaggatggaccaggttttgagtcagcattcaagcttttccatggccgagatggaatagtt 300 Query: 266 cccctttcaggaagatcatatgtgcctgatgagaacggcagtgagagcactgatgtcaag 325 |||||||||| |||||||||||| ||||||| ||| || |||||||| |||||||||| Sbjct: 301 cccctttcagaaagatcatatgtatctgatgaaaaccacaatgagagcattgatgtcaag 360 Query: 326 cctgaacctgctctgccctttaatccattggctgctagagccgctaccataagtctatca 385 |||||||||||||||| ||||||||||||||||||||||| || | |||||||||||| Sbjct: 361 actgaacctgctctgccatttaatccattggctgctagagcagcctcaataagtctatca 420 Query: 386 tcatttggaccatttgggttcaacttctttaatggcaagggcaaaaagcagaacaagaag 445 |||||||||||||||| || |||||| || ||||||||||||| ||||||||||||| Sbjct: 421 gcatttggaccatttggttttggcttcttcaacggcaagggcaaaaggcagaacaagaag 480 Query: 446 cccaacaatctagaccagtcacacaagaagcccaacaagccaaatcagaattccatgaaa 505 |||||||||||||| ||||| ||| |||||||||| | ||| ||||| ||| |||||| Sbjct: 481 cccaacaatctagatcagtcccaccagaagcccaagacaccagatcagtcttcgatgaaa 540 Query: 506 caaaaaggaggcaacccaccgtcccacgaggcaatgagcgatgaatggctagaaaatgga 565 |||||||||| ||||||||| || || |||||| | |||||||| ||| | |||||||| Sbjct: 541 caaaaaggagtcaacccaccatcacatgaggcattcagcgatgagtggttggaaaatggc 600 Query: 566 cagtgcccactcgctcggtcttaccgggcaatgagt 601 ||||||||||| || ||||||||||||||||||||| Sbjct: 601 cagtgcccacttgcgcggtcttaccgggcaatgagt 636
>ref|XM_550510.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1116 Score = 513 bits (259), Expect = e-142 Identities = 436/495 (88%) Strand = Plus / Plus Query: 107 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 166 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 73 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 132 Query: 167 ttgcctgtagctgcccggggaggcaagggtccgatctttgaggatggaccaggctttgag 226 ||||| ||||||||||| |||| ||||||||| || |||||||| |||||||||||||| Sbjct: 133 ttgccagtagctgcccgaggagccaagggtccaatttttgaggacggaccaggctttgat 192 Query: 227 tcggcattcaagcttttccatggacaggatgggatagtccccctttcaggaagatcatat 286 || ||||| || ||||||||||||| |||||| ||||| || |||||||||| |||||| Sbjct: 193 tcagcatttaaacttttccatggacgggatggaatagttccgctttcaggaaagtcatat 252 Query: 287 gtgcctgatgagaacggcagtgagagcactgatgtcaagcctgaacctgctctgcccttt 346 || |||||||||||| ||| |||||| ||||| ||||||||||||||||||||| ||| Sbjct: 253 gtacctgatgagaacaacagcgagagcgttgatgccaagcctgaacctgctctgccgttt 312 Query: 347 aatccattggctgctagagccgctaccataagtctatcatcatttggaccatttgggttc 406 || ||||||||||||||||| || || ||||||||||| ||||||| ||||| || || Sbjct: 313 aacccattggctgctagagctgccacaataagtctatctgcatttgggccattcggcttt 372 Query: 407 aacttctttaatggcaagggcaaaaagcagaacaagaagcccaacaatctagaccagtca 466 ||||||||||||||||||||||||| |||||||||||||| |||||||||| | |||||| Sbjct: 373 aacttctttaatggcaagggcaaaaggcagaacaagaagctcaacaatctaaatcagtca 432 Query: 467 cacaagaagcccaacaagccaaatcagaattccatgaaacaaaaaggaggcaacccaccg 526 |||||||||||| ||| || |||||||||||||||||||| |||||||| || || | Sbjct: 433 aacaagaagcccagcaatccgaatcagaattccatgaaacagaaaggaggtaattcatca 492 Query: 527 tcccacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtct 586 || ||||||||||||||| | |||||||| |||||||| ||||||||||| || |||||| Sbjct: 493 tcgcacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtct 552 Query: 587 taccgggcaatgagt 601 ||||| ||||||||| Sbjct: 553 taccgagcaatgagt 567
>ref|XM_476693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1700 Score = 486 bits (245), Expect = e-134 Identities = 494/577 (85%) Strand = Plus / Plus Query: 25 atcggcgaggatggaaatgctcttcagcagcctgttctgtgactcagcgtcatcggagaa 84 ||||||||||||||||||| ||||||||||| | | ||| || || ||||| ||||| Sbjct: 321 atcggcgaggatggaaatgttcttcagcagctttcttaatgaatcggcatcatcagagaa 380 Query: 85 cttttctggccatcccggtgttgagagatgcccattcctgaggaacatcaatggagccac 144 | | | ||| ||||| ||| |||||||||||||||||||| |||||||||||||| || Sbjct: 381 cctctttggtcatccaaatgtcgagagatgcccattcctgagaaacatcaatggagctac 440 Query: 145 aaccttttcattttcttctgctttgcctgtagctgcccggggaggcaagggtccgatctt 204 ||| | ||||||||||||||||||||| ||||||||||| ||||| || ||||| || || Sbjct: 441 aacatattcattttcttctgctttgccagtagctgcccgaggaggaaatggtccaatttt 500 Query: 205 tgaggatggaccaggctttgagtcggcattcaagcttttccatggacaggatgggatagt 264 |||||| |||||||||||||| || ||||| || |||||||||||| |||||| ||||| Sbjct: 501 tgaggacggaccaggctttgattcagcatttaaacttttccatggatgggatggaatagt 560 Query: 265 ccccctttcaggaagatcatatgtgcctgatgagaacggcagtgagagcactgatgtcaa 324 || |||||||||| |||||| | |||||||||| | ||||||||||| ||||| ||| Sbjct: 561 tccgctttcaggaaagtcatatttacctgatgagagcaacagtgagagcattgatgccaa 620 Query: 325 gcctgaacctgctctgccctttaatccattggctgctagagccgctaccataagtctatc 384 |||||||||||||||| ||||| ||||||||||||||||| || || ||||||||||| Sbjct: 621 tcctgaacctgctctgctgtttaacccattggctgctagagctgccacaataagtctatc 680 Query: 385 atcatttggaccatttgggttcaacttctttaatggcaagggcaaaaagcagaacaagaa 444 ||||||| |||||||| || |||||||||||||||||||| |||| |||||||||||| Sbjct: 681 tgcatttgggccatttggttttaacttctttaatggcaaggggaaaaggcagaacaagaa 740 Query: 445 gcccaacaatctagaccagtcacacaagaagcccaacaagccaaatcagaattccatgaa 504 ||||||||||||| | |||||| |||||||||||| ||| || || |||||||||||||| Sbjct: 741 gcccaacaatctaaatcagtcaaacaagaagcccagcaatccgaaccagaattccatgaa 800 Query: 505 acaaaaaggaggcaacccaccgtcccacgaggcaatgagcgatgaatggctagaaaatgg 564 ||| |||||||| ||| || | || ||||||||||||||| | |||||| | |||||||| Sbjct: 801 acagaaaggaggtaactcatcatcgcacgaggcaatgagcaacgaatggatggaaaatgg 860 Query: 565 acagtgcccactcgctcggtcttaccgggcaatgagt 601 ||||||||||| || ||||||||||| ||||||||| Sbjct: 861 gcagtgcccacttgcccggtcttaccgagcaatgagt 897
>dbj|AK065419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021B09, full insert sequence Length = 1699 Score = 486 bits (245), Expect = e-134 Identities = 494/577 (85%) Strand = Plus / Plus Query: 25 atcggcgaggatggaaatgctcttcagcagcctgttctgtgactcagcgtcatcggagaa 84 ||||||||||||||||||| ||||||||||| | | ||| || || ||||| ||||| Sbjct: 320 atcggcgaggatggaaatgttcttcagcagctttcttaatgaatcggcatcatcagagaa 379 Query: 85 cttttctggccatcccggtgttgagagatgcccattcctgaggaacatcaatggagccac 144 | | | ||| ||||| ||| |||||||||||||||||||| |||||||||||||| || Sbjct: 380 cctctttggtcatccaaatgtcgagagatgcccattcctgagaaacatcaatggagctac 439 Query: 145 aaccttttcattttcttctgctttgcctgtagctgcccggggaggcaagggtccgatctt 204 ||| | ||||||||||||||||||||| ||||||||||| ||||| || ||||| || || Sbjct: 440 aacatattcattttcttctgctttgccagtagctgcccgaggaggaaatggtccaatttt 499 Query: 205 tgaggatggaccaggctttgagtcggcattcaagcttttccatggacaggatgggatagt 264 |||||| |||||||||||||| || ||||| || |||||||||||| |||||| ||||| Sbjct: 500 tgaggacggaccaggctttgattcagcatttaaacttttccatggatgggatggaatagt 559 Query: 265 ccccctttcaggaagatcatatgtgcctgatgagaacggcagtgagagcactgatgtcaa 324 || |||||||||| |||||| | |||||||||| | ||||||||||| ||||| ||| Sbjct: 560 tccgctttcaggaaagtcatatttacctgatgagagcaacagtgagagcattgatgccaa 619 Query: 325 gcctgaacctgctctgccctttaatccattggctgctagagccgctaccataagtctatc 384 |||||||||||||||| ||||| ||||||||||||||||| || || ||||||||||| Sbjct: 620 tcctgaacctgctctgctgtttaacccattggctgctagagctgccacaataagtctatc 679 Query: 385 atcatttggaccatttgggttcaacttctttaatggcaagggcaaaaagcagaacaagaa 444 ||||||| |||||||| || |||||||||||||||||||| |||| |||||||||||| Sbjct: 680 tgcatttgggccatttggttttaacttctttaatggcaaggggaaaaggcagaacaagaa 739 Query: 445 gcccaacaatctagaccagtcacacaagaagcccaacaagccaaatcagaattccatgaa 504 ||||||||||||| | |||||| |||||||||||| ||| || || |||||||||||||| Sbjct: 740 gcccaacaatctaaatcagtcaaacaagaagcccagcaatccgaaccagaattccatgaa 799 Query: 505 acaaaaaggaggcaacccaccgtcccacgaggcaatgagcgatgaatggctagaaaatgg 564 ||| |||||||| ||| || | || ||||||||||||||| | |||||| | |||||||| Sbjct: 800 acagaaaggaggtaactcatcatcgcacgaggcaatgagcaacgaatggatggaaaatgg 859 Query: 565 acagtgcccactcgctcggtcttaccgggcaatgagt 601 ||||||||||| || ||||||||||| ||||||||| Sbjct: 860 gcagtgcccacttgcccggtcttaccgagcaatgagt 896
>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5) Length = 11618 Score = 331 bits (167), Expect = 2e-87 Identities = 287/327 (87%) Strand = Plus / Minus Query: 179 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 238 ||||| |||| ||||||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 9710 gcccgaggagccaagggtccaatttttgaggacggaccaggctttgattcagcatttaaa 9651 Query: 239 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 298 ||||||||||||| |||||| ||||| || |||||||||| |||||||| ||||||||| Sbjct: 9650 cttttccatggacgggatggaatagttccgctttcaggaaagtcatatgtacctgatgag 9591 Query: 299 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 358 ||| ||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 9590 aacaacagcgagagcgttgatgccaagcctgaacctgctctgccgtttaacccattggct 9531 Query: 359 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 418 |||||||| || || ||||||||||| ||||||| ||||| || || |||||||||||| Sbjct: 9530 gctagagctgccacaataagtctatctgcatttgggccattcggctttaacttctttaat 9471 Query: 419 ggcaagggcaaaaagcagaacaagaagcccaacaatctagaccagtcacacaagaagccc 478 ||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||||||| Sbjct: 9470 ggcaagggcaaaaggcagaacaagaagcccaacaatctaaatcagtcaaacaagaagccc 9411 Query: 479 aacaagccaaatcagaattccatgaaa 505 | ||| || |||||||||||||||||| Sbjct: 9410 agcaatccgaatcagaattccatgaaa 9384 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 107 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 166 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 9866 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 9807 Query: 167 ttgcctgtagctg 179 ||||| ||||||| Sbjct: 9806 ttgccagtagctg 9794 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 530 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 589 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 8921 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 8862 Query: 590 cgggcaatgagt 601 || ||||||||| Sbjct: 8861 cgagcaatgagt 8850
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 323 bits (163), Expect = 4e-85 Identities = 286/327 (87%) Strand = Plus / Minus Query: 179 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 238 ||||| |||| ||||||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 877622 gcccgaggagccaagggtccaatttttgaggacggaccaggctttgattcagcatttaaa 877563 Query: 239 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 298 ||||||||||||| |||||| ||||| || |||||||||| |||||||| ||||||||| Sbjct: 877562 cttttccatggacgggatggaatagttccgctttcaggaaagtcatatgtacctgatgag 877503 Query: 299 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 358 ||| ||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 877502 aacaacagcgagagcgttgatgccaagcctgaacctgctctgccgtttaacccattggct 877443 Query: 359 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 418 |||||||| || || ||||||||||| ||||||| ||||| || || |||||||||||| Sbjct: 877442 gctagagctgccacaataagtctatctgcatttgggccattcggctttaacttctttaat 877383 Query: 419 ggcaagggcaaaaagcagaacaagaagcccaacaatctagaccagtcacacaagaagccc 478 ||||||||||||| |||||||||||||| |||||||||| | |||||| ||||||||||| Sbjct: 877382 ggcaagggcaaaaggcagaacaagaagctcaacaatctaaatcagtcaaacaagaagccc 877323 Query: 479 aacaagccaaatcagaattccatgaaa 505 | ||| || |||||||||||||||||| Sbjct: 877322 agcaatccgaatcagaattccatgaaa 877296 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 107 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 166 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 877778 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 877719 Query: 167 ttgcctgtagctg 179 ||||| ||||||| Sbjct: 877718 ttgccagtagctg 877706 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 530 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 589 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 876833 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 876774 Query: 590 cgggcaatgagt 601 || ||||||||| Sbjct: 876773 cgagcaatgagt 876762
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 323 bits (163), Expect = 4e-85 Identities = 286/327 (87%) Strand = Plus / Minus Query: 179 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 238 ||||| |||| ||||||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 58517 gcccgaggagccaagggtccaatttttgaggacggaccaggctttgattcagcatttaaa 58458 Query: 239 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 298 ||||||||||||| |||||| ||||| || |||||||||| |||||||| ||||||||| Sbjct: 58457 cttttccatggacgggatggaatagttccgctttcaggaaagtcatatgtacctgatgag 58398 Query: 299 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 358 ||| ||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 58397 aacaacagcgagagcgttgatgccaagcctgaacctgctctgccgtttaacccattggct 58338 Query: 359 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 418 |||||||| || || ||||||||||| ||||||| ||||| || || |||||||||||| Sbjct: 58337 gctagagctgccacaataagtctatctgcatttgggccattcggctttaacttctttaat 58278 Query: 419 ggcaagggcaaaaagcagaacaagaagcccaacaatctagaccagtcacacaagaagccc 478 ||||||||||||| |||||||||||||| |||||||||| | |||||| ||||||||||| Sbjct: 58277 ggcaagggcaaaaggcagaacaagaagctcaacaatctaaatcagtcaaacaagaagccc 58218 Query: 479 aacaagccaaatcagaattccatgaaa 505 | ||| || |||||||||||||||||| Sbjct: 58217 agcaatccgaatcagaattccatgaaa 58191 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 107 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 166 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 58673 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 58614 Query: 167 ttgcctgtagctg 179 ||||| ||||||| Sbjct: 58613 ttgccagtagctg 58601 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 530 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 589 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 57728 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 57669 Query: 590 cgggcaatgagt 601 || ||||||||| Sbjct: 57668 cgagcaatgagt 57657
>dbj|AK069560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020P18, full insert sequence Length = 3418 Score = 323 bits (163), Expect = 4e-85 Identities = 286/327 (87%) Strand = Plus / Plus Query: 179 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 238 ||||| |||| ||||||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 1821 gcccgaggagccaagggtccaatttttgaggacggaccaggctttgattcagcatttaaa 1880 Query: 239 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 298 ||||||||||||| |||||| ||||| || |||||||||| |||||||| ||||||||| Sbjct: 1881 cttttccatggacgggatggaatagttccgctttcaggaaagtcatatgtacctgatgag 1940 Query: 299 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 358 ||| ||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 1941 aacaacagcgagagcgttgatgccaagcctgaacctgctctgccgtttaacccattggct 2000 Query: 359 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 418 |||||||| || || ||||||||||| ||||||| ||||| || || |||||||||||| Sbjct: 2001 gctagagctgccacaataagtctatctgcatttgggccattcggctttaacttctttaat 2060 Query: 419 ggcaagggcaaaaagcagaacaagaagcccaacaatctagaccagtcacacaagaagccc 478 ||||||||||||| |||||||||||||| |||||||||| | |||||| ||||||||||| Sbjct: 2061 ggcaagggcaaaaggcagaacaagaagctcaacaatctaaatcagtcaaacaagaagccc 2120 Query: 479 aacaagccaaatcagaattccatgaaa 505 | ||| || |||||||||||||||||| Sbjct: 2121 agcaatccgaatcagaattccatgaaa 2147 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 107 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 166 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 1665 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 1724 Query: 167 ttgcctgtagctg 179 ||||| ||||||| Sbjct: 1725 ttgccagtagctg 1737 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 530 cacgaggcaatgagcgatgaatggctagaaaatggacagtgcccactcgctcggtcttac 589 ||||||||||||||| | |||||||| |||||||| ||||||||||| || ||||||||| Sbjct: 2610 cacgaggcaatgagcaacgaatggctggaaaatgggcagtgcccacttgcccggtcttac 2669 Query: 590 cgggcaatgagt 601 || ||||||||| Sbjct: 2670 cgagcaatgagt 2681
>dbj|AK062240.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E07, full insert sequence Length = 1116 Score = 297 bits (150), Expect = 2e-77 Identities = 252/286 (88%) Strand = Plus / Plus Query: 316 tgatgtcaagcctgaacctgctctgccctttaatccattggctgctagagccgctaccat 375 ||||| ||||||||||||||||||||| ||||| ||||||||||||||||| || || || Sbjct: 18 tgatgccaagcctgaacctgctctgccgtttaacccattggctgctagagctgccacaat 77 Query: 376 aagtctatcatcatttggaccatttgggttcaacttctttaatggcaagggcaaaaagca 435 ||||||||| ||||||| ||||| || || ||||||||||||||||||||||||| ||| Sbjct: 78 aagtctatctgcatttgggccattcggctttaacttctttaatggcaagggcaaaaggca 137 Query: 436 gaacaagaagcccaacaatctagaccagtcacacaagaagcccaacaagccaaatcagaa 495 ||||||||||| |||||||||| | |||||| |||||||||||| ||| || |||||||| Sbjct: 138 gaacaagaagctcaacaatctaaatcagtcaaacaagaagcccagcaatccgaatcagaa 197 Query: 496 ttccatgaaacaaaaaggaggcaacccaccgtcccacgaggcaatgagcgatgaatggct 555 |||||||||||| |||||||| || || | || ||||||||||||||| | |||||||| Sbjct: 198 ttccatgaaacagaaaggaggtaattcatcatcgcacgaggcaatgagcaacgaatggct 257 Query: 556 agaaaatggacagtgcccactcgctcggtcttaccgggcaatgagt 601 |||||||| ||||||||||| || ||||||||||| ||||||||| Sbjct: 258 ggaaaatgggcagtgcccacttgcccggtcttaccgagcaatgagt 303
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 291 bits (147), Expect = 1e-75 Identities = 282/327 (86%) Strand = Plus / Minus Query: 179 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 238 ||||| ||||| || ||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 3217112 gcccgaggaggaaatggtccaatttttgaggacggaccaggctttgattcagcatttaaa 3217053 Query: 239 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 298 |||||||||||| |||||| ||||| || |||||||||| |||||| | ||||||||| Sbjct: 3217052 cttttccatggatgggatggaatagttccgctttcaggaaagtcatatttacctgatgag 3216993 Query: 299 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 358 | | ||||||||||| ||||| ||| |||||||||||||||| ||||| ||||||||| Sbjct: 3216992 agcaacagtgagagcattgatgccaatcctgaacctgctctgctgtttaacccattggct 3216933 Query: 359 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 418 |||||||| || || ||||||||||| ||||||| |||||||| || |||||||||||| Sbjct: 3216932 gctagagctgccacaataagtctatctgcatttgggccatttggttttaacttctttaat 3216873 Query: 419 ggcaagggcaaaaagcagaacaagaagcccaacaatctagaccagtcacacaagaagccc 478 |||||||| |||| ||||||||||||||||||||||||| | |||||| ||||||||||| Sbjct: 3216872 ggcaaggggaaaaggcagaacaagaagcccaacaatctaaatcagtcaaacaagaagccc 3216813 Query: 479 aacaagccaaatcagaattccatgaaa 505 | ||| || || ||||||||||||||| Sbjct: 3216812 agcaatccgaaccagaattccatgaaa 3216786 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 107 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 166 |||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||| Sbjct: 3217268 gagagatgcccattcctgagaaacatcaatggagctacaacatattcattttcttctgct 3217209 Query: 167 ttgcctgtagctg 179 ||||| ||||||| Sbjct: 3217208 ttgccagtagctg 3217196 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 509 aaaggaggcaacccaccgtcccacgaggcaatgagcgatgaatggctagaaaatggacag 568 |||||||| ||| || | || ||||||||||||||| | |||||| | |||||||| ||| Sbjct: 3216389 aaaggaggtaactcatcatcgcacgaggcaatgagcaacgaatggatggaaaatgggcag 3216330 Query: 569 tgcccactcgctcggtcttaccgggcaatgagt 601 |||||||| || ||||||||||| ||||||||| Sbjct: 3216329 tgcccacttgcccggtcttaccgagcaatgagt 3216297
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 291 bits (147), Expect = 1e-75 Identities = 282/327 (86%) Strand = Plus / Minus Query: 179 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 238 ||||| ||||| || ||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 132102 gcccgaggaggaaatggtccaatttttgaggacggaccaggctttgattcagcatttaaa 132043 Query: 239 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 298 |||||||||||| |||||| ||||| || |||||||||| |||||| | ||||||||| Sbjct: 132042 cttttccatggatgggatggaatagttccgctttcaggaaagtcatatttacctgatgag 131983 Query: 299 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 358 | | ||||||||||| ||||| ||| |||||||||||||||| ||||| ||||||||| Sbjct: 131982 agcaacagtgagagcattgatgccaatcctgaacctgctctgctgtttaacccattggct 131923 Query: 359 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 418 |||||||| || || ||||||||||| ||||||| |||||||| || |||||||||||| Sbjct: 131922 gctagagctgccacaataagtctatctgcatttgggccatttggttttaacttctttaat 131863 Query: 419 ggcaagggcaaaaagcagaacaagaagcccaacaatctagaccagtcacacaagaagccc 478 |||||||| |||| ||||||||||||||||||||||||| | |||||| ||||||||||| Sbjct: 131862 ggcaaggggaaaaggcagaacaagaagcccaacaatctaaatcagtcaaacaagaagccc 131803 Query: 479 aacaagccaaatcagaattccatgaaa 505 | ||| || || ||||||||||||||| Sbjct: 131802 agcaatccgaaccagaattccatgaaa 131776 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 107 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 166 |||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||| Sbjct: 132258 gagagatgcccattcctgagaaacatcaatggagctacaacatattcattttcttctgct 132199 Query: 167 ttgcctgtagctg 179 ||||| ||||||| Sbjct: 132198 ttgccagtagctg 132186 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 509 aaaggaggcaacccaccgtcccacgaggcaatgagcgatgaatggctagaaaatggacag 568 |||||||| ||| || | || ||||||||||||||| | |||||| | |||||||| ||| Sbjct: 131379 aaaggaggtaactcatcatcgcacgaggcaatgagcaacgaatggatggaaaatgggcag 131320 Query: 569 tgcccactcgctcggtcttaccgggcaatgagt 601 |||||||| || ||||||||||| ||||||||| Sbjct: 131319 tgcccacttgcccggtcttaccgagcaatgagt 131287
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 291 bits (147), Expect = 1e-75 Identities = 282/327 (86%) Strand = Plus / Minus Query: 179 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 238 ||||| ||||| || ||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 26805 gcccgaggaggaaatggtccaatttttgaggacggaccaggctttgattcagcatttaaa 26746 Query: 239 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 298 |||||||||||| |||||| ||||| || |||||||||| |||||| | ||||||||| Sbjct: 26745 cttttccatggatgggatggaatagttccgctttcaggaaagtcatatttacctgatgag 26686 Query: 299 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 358 | | ||||||||||| ||||| ||| |||||||||||||||| ||||| ||||||||| Sbjct: 26685 agcaacagtgagagcattgatgccaatcctgaacctgctctgctgtttaacccattggct 26626 Query: 359 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 418 |||||||| || || ||||||||||| ||||||| |||||||| || |||||||||||| Sbjct: 26625 gctagagctgccacaataagtctatctgcatttgggccatttggttttaacttctttaat 26566 Query: 419 ggcaagggcaaaaagcagaacaagaagcccaacaatctagaccagtcacacaagaagccc 478 |||||||| |||| ||||||||||||||||||||||||| | |||||| ||||||||||| Sbjct: 26565 ggcaaggggaaaaggcagaacaagaagcccaacaatctaaatcagtcaaacaagaagccc 26506 Query: 479 aacaagccaaatcagaattccatgaaa 505 | ||| || || ||||||||||||||| Sbjct: 26505 agcaatccgaaccagaattccatgaaa 26479 Score = 105 bits (53), Expect = 2e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 107 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 166 |||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||| Sbjct: 26961 gagagatgcccattcctgagaaacatcaatggagctacaacatattcattttcttctgct 26902 Query: 167 ttgcctgtagctg 179 ||||| ||||||| Sbjct: 26901 ttgccagtagctg 26889 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 509 aaaggaggcaacccaccgtcccacgaggcaatgagcgatgaatggctagaaaatggacag 568 |||||||| ||| || | || ||||||||||||||| | |||||| | |||||||| ||| Sbjct: 26082 aaaggaggtaactcatcatcgcacgaggcaatgagcaacgaatggatggaaaatgggcag 26023 Query: 569 tgcccactcgctcggtcttaccgggcaatgagt 601 |||||||| || ||||||||||| ||||||||| Sbjct: 26022 tgcccacttgcccggtcttaccgagcaatgagt 25990
>gb|BT017396.1| Zea mays clone EL01N0328C04.c mRNA sequence Length = 1249 Score = 194 bits (98), Expect = 2e-46 Identities = 161/182 (88%) Strand = Plus / Plus Query: 107 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 166 ||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||||||| Sbjct: 873 gagagatgcccattcctgaggaatatcaatggagctacaaccttttccctctcttctgct 932 Query: 167 ttgcctgtagctgcccggggaggcaagggtccgatctttgaggatggaccaggctttgag 226 ||||| |||||||| | |||||||||||||| || |||||||| || ||||||||||| Sbjct: 933 ttgccagtagctgctcaaggaggcaagggtccaatttttgaggaagggtcaggctttgag 992 Query: 227 tcggcattcaagcttttccatggacaggatgggatagtccccctttcaggaagatcatat 286 || |||||||||||||||||||| | ||||| ||||| |||||||||| |||||||||| Sbjct: 993 tcagcattcaagcttttccatggtcgagatggaatagttcccctttcagaaagatcatat 1052 Query: 287 gt 288 || Sbjct: 1053 gt 1054
>gb|AC157776.1| Zea mays chromosome 8 BAC clone ZMMBBb0483G05, complete sequence Length = 147470 Score = 153 bits (77), Expect = 8e-34 Identities = 162/189 (85%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 110 agatgcccattcctgaggaacatcaatggagccacaaccttttcatttt-cttctgcttt 168 |||||||||||| ||||||| ||||||||||| ||||||||||| | |||||||||| Sbjct: 32847 agatgcccattcgtgaggaatatcaatggagctacaaccttttcccctcacttctgcttt 32906 Query: 169 gcctgtagctgcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtc 228 ||| |||||||| | |||||||||||||| || |||||||| || ||||||||||||| Sbjct: 32907 gccagtagctgctcaaggaggcaagggtccaatttttgaggaagggtcaggctttgagtc 32966 Query: 229 ggcattcaagcttttccatggacaggatgggatagtccccctttcaggaagatcatatgt 288 ||||||||||||||| |||| | ||||| ||||||||||||| || |||||||||||| Sbjct: 32967 agcattcaagcttttctatggccgagatggaatagtccccctttaagaaagatcatatgt 33026 Query: 289 gcctgatga 297 ||||||| Sbjct: 33027 atctgatga 33035
>ref|NM_197931.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0056G17.7), mRNA Length = 1251 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 105 ttgagagatgcccattcctgaggaacatcaatg 137 |||| |||||||||||||| ||||||||||||| Sbjct: 151 ttgaaagatgcccattcctaaggaacatcaatg 183
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 105 ttgagagatgcccattcctgaggaacatcaatg 137 |||| |||||||||||||| ||||||||||||| Sbjct: 128332 ttgaaagatgcccattcctaaggaacatcaatg 128300
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 105 ttgagagatgcccattcctgaggaacatcaatg 137 |||| |||||||||||||| ||||||||||||| Sbjct: 22673663 ttgaaagatgcccattcctaaggaacatcaatg 22673631
>dbj|AK104136.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F07, full insert sequence Length = 1281 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 105 ttgagagatgcccattcctgaggaacatcaatg 137 |||| |||||||||||||| ||||||||||||| Sbjct: 196 ttgaaagatgcccattcctaaggaacatcaatg 228
>dbj|AK072734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141G14, full insert sequence Length = 1357 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 105 ttgagagatgcccattcctgaggaacatcaatg 137 |||| |||||||||||||| ||||||||||||| Sbjct: 218 ttgaaagatgcccattcctaaggaacatcaatg 250
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 105 ttgagagatgcccattcctgaggaacatcaatg 137 |||| |||||||||||||| ||||||||||||| Sbjct: 22686131 ttgaaagatgcccattcctaaggaacatcaatg 22686099
>ref|NM_119158.2| Arabidopsis thaliana HMA3; ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism AT4G30120 (HMA3) mRNA, complete cds Length = 2282 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 agtgagagcactgatgtcaagcctgaacct 334 ||||||||| ||||||||||||||||||| Sbjct: 450 agtgagagcgttgatgtcaagcctgaacct 421
>gb|BC030641.1| Homo sapiens motile sperm domain containing 2, mRNA (cDNA clone MGC:26706 IMAGE:4821861), complete cds Length = 3189 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 caaccttttcattttcttctgctttg 169 |||| ||||||||||||||||||||| Sbjct: 1019 caactttttcattttcttctgctttg 994
>gb|AY434730.1| Arabidopsis thaliana ecotype Columbia potential Zn/Cd heavy metal transporter (HMA3) pseudogene mRNA, complete cds Length = 2307 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 agtgagagcactgatgtcaagcctgaacct 334 ||||||||| ||||||||||||||||||| Sbjct: 461 agtgagagcgttgatgtcaagcctgaacct 432
>gb|AY434729.1| Arabidopsis thaliana ecotype Wassilewskija potential Zn/Cd heavy metal transporter (HMA3) mRNA, complete cds Length = 2308 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 agtgagagcactgatgtcaagcctgaacct 334 ||||||||| ||||||||||||||||||| Sbjct: 461 agtgagagcgttgatgtcaagcctgaacct 432
>gb|AY055217.1| Arabidopsis thaliana putative heavy metal transporter HMA3 mRNA, complete cds Length = 2283 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 agtgagagcactgatgtcaagcctgaacct 334 ||||||||| ||||||||||||||||||| Sbjct: 450 agtgagagcgttgatgtcaagcctgaacct 421
>ref|XM_548867.2| PREDICTED: Canis familiaris similar to motile sperm domain containing 2 (LOC491747), mRNA Length = 1713 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 caaccttttcattttcttctgctttg 169 ||||||||||||||||||| |||||| Sbjct: 1084 caaccttttcattttcttcagctttg 1059
>gb|DQ446885.1| Arabidopsis thaliana clone pENTR221-At4g30120 ATPase E1-E2 type family protein/heavy-metal-associated domain-containing protein (At4g30120) mRNA, complete cds Length = 1629 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 305 agtgagagcactgatgtcaagcctgaacct 334 ||||||||| ||||||||||||||||||| Sbjct: 450 agtgagagcgttgatgtcaagcctgaacct 421
>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72 Length = 198924 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 305 agtgagagcactgatgtcaagcctgaacct 334 ||||||||| ||||||||||||||||||| Sbjct: 72556 agtgagagcgttgatgtcaagcctgaacct 72585
>emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4, BAC clone F6G3 (ESSA project) Length = 93953 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 305 agtgagagcactgatgtcaagcctgaacct 334 ||||||||| ||||||||||||||||||| Sbjct: 69727 agtgagagcgttgatgtcaagcctgaacct 69756
>gb|AC121340.4| Homo sapiens X BAC RP13-928P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125285 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 caaccttttcattttcttctgctttg 169 |||| ||||||||||||||||||||| Sbjct: 31705 caactttttcattttcttctgctttg 31680
>ref|NM_152581.1| Homo sapiens motile sperm domain containing 2 (MOSPD2), mRNA Length = 3189 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 caaccttttcattttcttctgctttg 169 |||| ||||||||||||||||||||| Sbjct: 1019 caactttttcattttcttctgctttg 994
>emb|CR615328.1| full-length cDNA clone CS0DI021YN05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1792 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 caaccttttcattttcttctgctttg 169 |||| ||||||||||||||||||||| Sbjct: 1016 caactttttcattttcttctgctttg 991
>dbj|AK093075.1| Homo sapiens cDNA FLJ35756 fis, clone TESTI2004687 Length = 1820 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 caaccttttcattttcttctgctttg 169 |||| ||||||||||||||||||||| Sbjct: 1016 caactttttcattttcttctgctttg 991
>gb|AC140846.3| Homo sapiens X PAC RP1-93D11 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 152761 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 caaccttttcattttcttctgctttg 169 |||| ||||||||||||||||||||| Sbjct: 71823 caactttttcattttcttctgctttg 71798
>gb|AC102601.8| Mus musculus chromosome 1, clone RP23-379D23, complete sequence Length = 181908 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 attttcttctgctttgcctgta 175 |||||||||||||||||||||| Sbjct: 121212 attttcttctgctttgcctgta 121233
>emb|AL834345.1|HSM805405 Homo sapiens mRNA; cDNA DKFZp761K0315 (from clone DKFZp761K0315) Length = 3273 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 144 caaccttttcattttcttctgctttg 169 |||| ||||||||||||||||||||| Sbjct: 104 caactttttcattttcttctgctttg 79
>ref|NM_148091.2| Arabidopsis thaliana unknown protein AT5G45410 transcript variant AT5G45410.2 mRNA, complete cds Length = 1343 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 185 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 244 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 272 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 331 Query: 245 catgg 249 ||||| Sbjct: 332 catgg 336
>ref|NM_123909.3| Arabidopsis thaliana unknown protein AT5G45410 transcript variant AT5G45410.1 mRNA, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 185 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 244 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 199 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 258 Query: 245 catgg 249 ||||| Sbjct: 259 catgg 263
>gb|AC168879.4| Mus musculus BAC clone RP24-407B6 from chromosome 13, complete sequence Length = 169877 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 418 tggcaagggcaaaaagcagaacaag 442 ||||||| ||||||||||||||||| Sbjct: 62580 tggcaagagcaaaaagcagaacaag 62604
>gb|AC121583.3| Mus musculus BAC clone RP23-259K16 from 13, complete sequence Length = 207129 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 418 tggcaagggcaaaaagcagaacaag 442 ||||||| ||||||||||||||||| Sbjct: 183004 tggcaagagcaaaaagcagaacaag 183028
>gb|AY050908.1| Arabidopsis thaliana unknown protein (At5g45410) mRNA, partial cds Length = 1180 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 185 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 244 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 90 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 149 Query: 245 catgg 249 ||||| Sbjct: 150 catgg 154
>gb|AC026469.8| Homo sapiens chromosome 16 clone RP11-442O1, complete sequence Length = 199669 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 tcattttcttctgctttgcct 172 ||||||||||||||||||||| Sbjct: 150602 tcattttcttctgctttgcct 150622
>emb|BX832539.1|CNS0A173 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1219 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 185 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 244 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 183 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 242 Query: 245 catgg 249 ||||| Sbjct: 243 catgg 247
>gb|AC092341.5| Homo sapiens chromosome 16 clone RP11-260K13, complete sequence Length = 180623 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 152 tcattttcttctgctttgcct 172 ||||||||||||||||||||| Sbjct: 24280 tcattttcttctgctttgcct 24300
>emb|BX830764.1|CNS0A0TA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1233 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 185 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 244 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 175 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 234 Query: 245 catgg 249 ||||| Sbjct: 235 catgg 239
>gb|AY088538.1| Arabidopsis thaliana clone 767 mRNA, complete sequence Length = 1275 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 185 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 244 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 201 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 260 Query: 245 catgg 249 ||||| Sbjct: 261 catgg 265
>gb|BT002755.1| Arabidopsis thaliana clone C104940 unknown protein (At5g45410) mRNA, complete cds Length = 1060 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 185 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 244 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 121 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 180 Query: 245 catgg 249 ||||| Sbjct: 181 catgg 185
>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19 Length = 85020 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 185 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 244 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 22475 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 22416 Query: 245 catgg 249 ||||| Sbjct: 22415 catgg 22411
>gb|AC173210.3| Mus musculus BAC clone RP23-29I5 from chromosome 13, complete sequence Length = 228881 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 418 tggcaagggcaaaaagcagaacaag 442 ||||||| ||||||||||||||||| Sbjct: 92075 tggcaagagcaaaaagcagaacaag 92099
>gb|AC163036.2| Mus musculus BAC clone RP23-219G12 from chromosome 17, complete sequence Length = 217187 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 549 aatggctagaaaatggacagtgcc 572 ||||||||||| |||||||||||| Sbjct: 160034 aatggctagaatatggacagtgcc 160011
>ref|NM_191489.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3867 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 agaaaatggacagtgcccac 575 |||||||||||||||||||| Sbjct: 804 agaaaatggacagtgcccac 823
>gb|AF131216.2| Homo sapiens chromosome 8 map 8p23-p22 clone CTB-164D9, CTB-169o5, CTB-65D4, CTC-271o23, CTC-367J24, complete sequence; and clones CTC-493P15, CTB-91N18, partial sequence Length = 321261 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 32507 aagggcaaaaagcagaacaa 32488
>gb|AC147343.2| Pan troglodytes BAC clone CH251-14P15 from Y, complete sequence Length = 277007 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 86660 aagggcaaaaagcagaacaa 86641
>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence Length = 198030 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ggcattcaagcttttccatg 248 |||||||||||||||||||| Sbjct: 88985 ggcattcaagcttttccatg 89004
>gb|AC147117.2| Pan troglodytes BAC clone CH251-532B3 from Y, complete sequence Length = 207020 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 94080 aagggcaaaaagcagaacaa 94099
>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete sequence Length = 150375 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cacaaccttttcattttcttctgc 165 |||| ||||||||||||||||||| Sbjct: 84943 cacagccttttcattttcttctgc 84966
>gb|AC121605.3| Mus musculus BAC clone RP23-312E16 from 1, complete sequence Length = 196494 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 cacaaccttttcattttctt 161 |||||||||||||||||||| Sbjct: 171061 cacaaccttttcattttctt 171080
>gb|AC117216.3| Mus musculus BAC clone RP23-310O5 from 2, complete sequence Length = 184628 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttttcattttcttctgcttt 168 |||||||||||||||||||| Sbjct: 53847 ttttcattttcttctgcttt 53828
>ref|XM_536943.2| PREDICTED: Canis familiaris similar to ATP-binding cassette transporter sub-family A member 16 (LOC479816), mRNA Length = 5031 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 482 aagccaaatcagaattccatgaaa 505 |||||||||||||||||| ||||| Sbjct: 2857 aagccaaatcagaattccctgaaa 2834
>gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 map 19, complete sequence Length = 195066 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cagtgagagcactgatgtca 323 |||||||||||||||||||| Sbjct: 68478 cagtgagagcactgatgtca 68459
>gb|AC159100.2| Mus musculus BAC clone RP24-248F9 from chromosome 9, complete sequence Length = 161485 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttttcattttcttctgcttt 168 |||||||||||||||||||| Sbjct: 121279 ttttcattttcttctgcttt 121260
>emb|BX546468.1| Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3, complete sequence Length = 61422 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 29009 aagggcaaaaagcagaacaa 28990
>emb|AL365503.10| Human DNA sequence from clone RP11-409K15 on chromosome 6, complete sequence Length = 105657 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 11693 aagggcaaaaagcagaacaa 11712
>emb|AL591848.13| Human DNA sequence from clone RP11-439E19 on chromosome 1 Contains the 3' end of the gene for a novel protein (FLJ32001, DKFZp451A152, DKFZp451B077, FLJ00215), a putative novel transcript, the gene for CGI-49 protein (FLJ90697), a ribosomal protein L35a (RPL35A) pseudogene, a novel gene (FLJ12783, FLJ43187), the 3' end of a pseudogene similar to part of the kinesin family member 1C (KIF1C) and a CpG island, complete sequence Length = 144941 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 28700 aagggcaaaaagcagaacaa 28681
>emb|AL589882.10| Human DNA sequence from clone RP11-368F13 on chromosome 10, complete sequence Length = 69266 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 6155 aagggcaaaaagcagaacaa 6174
>emb|AL358779.13| Human DNA sequence from clone RP11-339N8 on chromosome 9 Contains a novel gene and a ribosomal protein L36A (RPL36A) pseudogene, complete sequence Length = 147109 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 aattccatgaaacaaaaagg 513 |||||||||||||||||||| Sbjct: 139186 aattccatgaaacaaaaagg 139205
>emb|AL355137.23| Human DNA sequence from clone RP11-511D14 on chromosome 6p23-24.3 Contains the gene for a novel protein isentical to ribosomal protein L15 (RPL15), complete sequence Length = 190223 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 113035 aagggcaaaaagcagaacaa 113054
>emb|AL356479.12| Human DNA sequence from clone RP11-48A6 on chromosome 1p21.3-22.3 Contains the 5' end of a novel gene, complete sequence Length = 128142 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 62709 aagggcaaaaagcagaacaa 62690
>emb|AL355798.7| Human DNA sequence from clone RP11-417A17 on chromosome 10 Contains the 5' end of the APBB1IP gene for amyloid beta (A4) precursor protein-binding family B member 1 interacting protein and two CpG islands, complete sequence Length = 122948 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 21868 aagggcaaaaagcagaacaa 21849
>emb|AL353135.32| Human DNA sequence from clone RP11-63L7 on chromosome 6 Contains the PROL2 gene for proline rich 2 (proline-rich protein with nuclear targeting signal), the gene for NB4 apoptosis/differentiation related protein (PNAS-145), the gene for serine-arginine repressor protein (35kDa) (SRrp35), the gene for a novel protein similar to putative amidohydrolase, the 3' end of the GABRR1 gene for gamma-aminobutyric acid (GABA) receptor, rho 1 and 3 CpG islands, complete sequence Length = 127653 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 56971 aagggcaaaaagcagaacaa 56952
>emb|AL353704.10| Human DNA sequence from clone RP11-551M15 on chromosome 13 Contains three novel genes, the 5' end of the ARHGEF7 gene for Rho guanine nucleotide exchange factor (GEF) 7 (KIAA0142) and three CpG islands, complete sequence Length = 117417 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 34263 aagggcaaaaagcagaacaa 34282
>emb|AL162425.15| Human DNA sequence from clone RP11-523L1 on chromosome 9 Contains the TNC gene for tenascin C (hexabrachion) (TN, HXB) and a novel gene, complete sequence Length = 177728 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 811 aagggcaaaaagcagaacaa 830
>emb|AL133412.7| Human DNA sequence from clone RP11-78H18 on chromosome 9q22.1-22.33 Contains the 5' end of the TNFSF15 gene for tumor necrosis factor (ligand) superfamily, member 15 (TL1, VEG1), a PRP4 pre-mRNA processing factor 4 homolog B (PR4H, Prp4, PRP4H, PRP4K, KIAA0536) (PRPF4B) pseudogene and the TNFSF8 gene for tumor necrosis factor (ligand) superfamily, member 8 (CD153, CD30L, CD30LG), complete sequence Length = 158717 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 157528 aagggcaaaaagcagaacaa 157547
>gb|AC159096.2| Mus musculus chromosome 1, clone RP24-95N15, complete sequence Length = 189668 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 cacaaccttttcattttctt 161 |||||||||||||||||||| Sbjct: 7618 cacaaccttttcattttctt 7599
>emb|AL163202.2|HS21C002 Homo sapiens chromosome 21 segment HS21C002 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 293046 aagggcaaaaagcagaacaa 293027
>emb|X54106.1|PHADH1 P.hybrida ADH1 gene for alcohol dehydrogenase 1 Length = 4672 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 acaaccttttcattttcttc 162 |||||||||||||||||||| Sbjct: 492 acaaccttttcattttcttc 473
>gb|AC109635.6| Homo sapiens chromosome 11, clone RP11-347H15, complete sequence Length = 167920 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 119617 aagggcaaaaagcagaacaa 119598
>emb|AL445563.1|MPULM01 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 1/3 Length = 327650 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 405 tcaacttctttaatggcaagggcaaaaa 432 |||| |||||||||||||||||| |||| Sbjct: 164889 tcaatttctttaatggcaagggctaaaa 164916
>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence Length = 226483 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cacaaccttttcattttcttctgc 165 |||| ||||||||||||||||||| Sbjct: 54605 cacagccttttcattttcttctgc 54628
>gb|AC092916.6| Homo sapiens 3 BAC RP11-615J4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 132182 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 65253 aagggcaaaaagcagaacaa 65272 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 59948 aagggcaaaaagcagaacaa 59967
>gb|AC109633.5| Homo sapiens chromosome 8, clone CTD-2024D23, complete sequence Length = 134242 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 110917 aagggcaaaaagcagaacaa 110936
>gb|AC025048.8| Homo sapiens chromosome 17, clone CTD-2319I12, complete sequence Length = 137921 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 42440 aagggcaaaaagcagaacaa 42459
>dbj|BS000666.1| Pan troglodytes chromosome Y clone:PTBY-003G06, complete sequences Length = 102559 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 81232 aagggcaaaaagcagaacaa 81251
>gb|AC091559.7| Homo sapiens chromosome 8, clone RP11-60C8, complete sequence Length = 166357 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 96270 aagggcaaaaagcagaacaa 96289
>gb|AC183098.3| Mus musculus BAC clone CH25-385D19 from chromosome 6, complete sequence Length = 101511 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ttttcattttcttctgcttt 168 |||||||||||||||||||| Sbjct: 92130 ttttcattttcttctgcttt 92149
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 155679 aagggcaaaaagcagaacaa 155660
>gb|AC092860.39| Pan troglodytes clone rp43-125j14, complete sequence Length = 160656 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 36123 aagggcaaaaagcagaacaa 36104 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 17663 aagggcaaaaagcagaacaa 17644
>gb|AC104998.4| Homo sapiens chromosome 8, clone CTC-830C11, complete sequence Length = 129469 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 84969 aagggcaaaaagcagaacaa 84950
>dbj|AK022088.1| Homo sapiens cDNA FLJ12026 fis, clone HEMBB1001816 Length = 1955 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 712 aagggcaaaaagcagaacaa 731
>gb|AC096538.2| Homo sapiens chromosome 1 clone RP11-146P11, complete sequence Length = 173048 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 39492 aagggcaaaaagcagaacaa 39473
>gb|AC009721.9| Homo sapiens 12q24.1-116.6-118.9 BAC RP11-129O9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166765 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 41101 aagggcaaaaagcagaacaa 41082
>gb|AC108683.2| Homo sapiens Xp BAC RP11-539J11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 61375 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 1132 aagggcaaaaagcagaacaa 1113
>gb|AC113401.2| Homo sapiens chromosome 5 clone RP11-454E20, complete sequence Length = 130491 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 55510 aagggcaaaaagcagaacaa 55529
>gb|AC074035.22| Homo sapiens Xp BAC RP11-707P20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158710 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 869 aagggcaaaaagcagaacaa 888
>gb|AC093825.2| Homo sapiens BAC clone RP11-389O4 from 4, complete sequence Length = 149391 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 128903 aagggcaaaaagcagaacaa 128884
>gb|AC097507.2| Homo sapiens BAC clone RP11-371E22 from 4, complete sequence Length = 167032 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 41445 aagggcaaaaagcagaacaa 41464
>gb|AC093329.6| Homo sapiens chromosome 8, clone RP11-662G23, complete sequence Length = 191820 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 143805 aagggcaaaaagcagaacaa 143824
>gb|AC079623.15| Homo sapiens 3 BAC RP11-201D16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 201451 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 30948 aagggcaaaaagcagaacaa 30967
>gb|AC068510.8| Homo sapiens chromosome 8, clone RP11-662E23, complete sequence Length = 191820 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 143804 aagggcaaaaagcagaacaa 143823
>gb|AC093700.4| Homo sapiens BAC clone RP11-815N9 from 4, complete sequence Length = 172779 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 21917 aagggcaaaaagcagaacaa 21898
>ref|XM_695565.1| PREDICTED: Danio rerio similar to LOC443704 protein (LOC571919), mRNA Length = 3909 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 tctgctttgcctgtagctgc 180 |||||||||||||||||||| Sbjct: 3565 tctgctttgcctgtagctgc 3546
>gb|AC096950.2| Homo sapiens chromosome 1 clone RP4-612J11, complete sequence Length = 117864 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 93683 aagggcaaaaagcagaacaa 93664
>gb|AC087457.5| Homo sapiens chromosome 15, clone RP11-814P5, complete sequence Length = 141899 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 110970 aagggcaaaaagcagaacaa 110989
>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence Length = 168521 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttttcattttcttctgcttt 168 |||||||||||||||||||| Sbjct: 78623 ttttcattttcttctgcttt 78604
>gb|AC020688.7| Homo sapiens chromosome 8, clone RP11-255B23, complete sequence Length = 198958 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 35638 aagggcaaaaagcagaacaa 35619
>gb|AC026795.6| Homo sapiens chromosome 5 clone CTD-2287L22, complete sequence Length = 156277 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 106750 aagggcaaaaagcagaacaa 106769 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 70317 aagggcaaaaagcagaacaa 70298
>gb|AC008597.8| Homo sapiens chromosome 5 clone CTB-102L23, complete sequence Length = 69479 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 51555 aagggcaaaaagcagaacaa 51536
>gb|AC000037.2| Homo sapiens Chromosome 1p13.3 cosmid Clone newsb, complete sequence Length = 10311 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 2048 aagggcaaaaagcagaacaa 2067
>gb|AC002520.3| Homo sapiens Chromosome 1p13 Cosmid Clone m5-3, complete sequence Length = 11899 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 10818 aagggcaaaaagcagaacaa 10837
>gb|AC000032.7| Homo sapiens Chromosome 1p13.3 Cosmid Clone cgtm12, complete sequence Length = 30140 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 29039 aagggcaaaaagcagaacaa 29058 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 10586 aagggcaaaaagcagaacaa 10605
>gb|AC000031.6| Homo sapiens Chromosome 1p13.3 Cosmid Clone ctgm1, complete sequence Length = 38703 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 3624 aagggcaaaaagcagaacaa 3643
>gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214029 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 cttttcattttcttctgctt 167 |||||||||||||||||||| Sbjct: 43959 cttttcattttcttctgctt 43978
>gb|AC035144.3|AC035144 Homo sapiens chromosome 5 clone CTD-2220M12, complete sequence Length = 112626 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 86532 aagggcaaaaagcagaacaa 86513
>gb|AC024564.4|AC024564 Homo sapiens chromosome 5 clone CTC-532M5, complete sequence Length = 176621 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 34870 aagggcaaaaagcagaacaa 34889
>gb|AC008945.6|AC008945 Homo sapiens chromosome 5 clone CTD-2325A15, complete sequence Length = 193254 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 149 ttttcattttcttctgcttt 168 |||||||||||||||||||| Sbjct: 172203 ttttcattttcttctgcttt 172222
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 agaaaatggacagtgcccac 575 |||||||||||||||||||| Sbjct: 33093938 agaaaatggacagtgcccac 33093957
>gb|AC097376.3| Homo sapiens BAC clone RP11-83A24 from 4, complete sequence Length = 145395 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 121131 aagggcaaaaagcagaacaa 121112
>gb|AC073913.23| Homo sapiens 12 BAC RP11-955H22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168165 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 155478 aagggcaaaaagcagaacaa 155497
>gb|AC009316.3| Homo sapiens BAC clone RP11-562F14 from 2, complete sequence Length = 146204 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 ttccatgaaacaaaaaggaggcaa 519 ||||||||||||||| |||||||| Sbjct: 126253 ttccatgaaacaaaatggaggcaa 126276
>gb|AC146031.4| Pan troglodytes BAC clone RP43-124G6 from chromosome 7, complete sequence Length = 172449 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 133880 aagggcaaaaagcagaacaa 133899
>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence Length = 185555 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 79550 aagggcaaaaagcagaacaa 79531
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 agaaaatggacagtgcccac 575 |||||||||||||||||||| Sbjct: 30848 agaaaatggacagtgcccac 30867
>gb|AC092840.4| Homo sapiens BAC clone RP11-258O11 from 2, complete sequence Length = 133042 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 43372 aagggcaaaaagcagaacaa 43391
>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence Length = 155354 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttttcattttcttctgcttt 168 |||||||||||||||||||| Sbjct: 100125 ttttcattttcttctgcttt 100106
>gb|AC136365.5| Homo sapiens chromosome 8, clone RP11-97P4, complete sequence Length = 143756 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 attcctgaggaacatcaatg 137 |||||||||||||||||||| Sbjct: 8889 attcctgaggaacatcaatg 8870
>gb|AC100809.9| Homo sapiens chromosome 8, clone CTC-493P15, complete sequence Length = 184851 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 39851 aagggcaaaaagcagaacaa 39870
>gb|AC138612.1| Homo sapiens BAC clone CTD-2293E22 from 2, complete sequence Length = 158057 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 113984 aagggcaaaaagcagaacaa 114003 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 77551 aagggcaaaaagcagaacaa 77532
>dbj|BS000222.1| Pan troglodytes chromosome 22 clone:RP43-111J12, map 22, complete sequences Length = 189474 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 142057 aagggcaaaaagcagaacaa 142038
>emb|AL928902.16| Mouse DNA sequence from clone RP24-221D3 on chromosome 2, complete sequence Length = 167573 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 32 aggatggaaatgctcttcagcagcctgt 59 |||||||||||||| |||||||| |||| Sbjct: 22195 aggatggaaatgctgttcagcagtctgt 22222
>gb|AC101703.11| Mus musculus chromosome 1, clone RP23-248B15, complete sequence Length = 208984 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 cacaaccttttcattttctt 161 |||||||||||||||||||| Sbjct: 753 cacaaccttttcattttctt 772
>dbj|AK068412.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154B18, full insert sequence Length = 4412 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 agaaaatggacagtgcccac 575 |||||||||||||||||||| Sbjct: 1188 agaaaatggacagtgcccac 1207
>emb|AJ239318.3|HS127M18 Homo sapiens chromosome 21 sequence from PAC RPCI-1 127M18 map 21q11.1 region D21S190, complete sequence Length = 88800 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 28573 aagggcaaaaagcagaacaa 28554
>emb|AJ239322.3|HS156L9 Homo sapiens sequence from PAC RPCI-1 156L9, complete sequence Length = 111293 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 19014 aagggcaaaaagcagaacaa 19033
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence Length = 174449 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 ggcattcaagcttttccatg 248 |||||||||||||||||||| Sbjct: 156444 ggcattcaagcttttccatg 156463
>gb|AC153931.2| Mus musculus 10 BAC RP24-147A18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172260 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 cattttcttctgctttgcct 172 |||||||||||||||||||| Sbjct: 87564 cattttcttctgctttgcct 87545
>emb|AL109662.3|CNS018OU Human chromosome 14 DNA sequence BAC R-1053O12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 168176 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 143509 aagggcaaaaagcagaacaa 143528
>emb|AL049781.5|CNS00003 Human chromosome 14 DNA sequence BAC R-340L3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 188165 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 83980 aagggcaaaaagcagaacaa 83961
>dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-349F21, complete sequence Length = 186218 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 139987 aagggcaaaaagcagaacaa 139968
>emb|CT010473.14| Mouse DNA sequence from clone RP23-238D5 on chromosome 17, complete sequence Length = 173998 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 549 aatggctagaaaatggacagtgcc 572 ||||||||||| |||||||||||| Sbjct: 9778 aatggctagaatatggacagtgcc 9755
>dbj|AP005902.2| Homo sapiens genomic DNA, chromosome 8p11.21, clone: KB1582A10, complete sequence Length = 149577 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 attcctgaggaacatcaatg 137 |||||||||||||||||||| Sbjct: 87216 attcctgaggaacatcaatg 87235
>emb|CT030181.13| Mouse DNA sequence from clone RP23-115A18 on chromosome 9, complete sequence Length = 281479 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttttcattttcttctgcttt 168 |||||||||||||||||||| Sbjct: 65928 ttttcattttcttctgcttt 65909
>gb|AC005381.1|AC005381 Homo sapiens chromosome 19, cosmid F19926, complete sequence Length = 41378 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tttcattttcttctgctttg 169 |||||||||||||||||||| Sbjct: 39553 tttcattttcttctgctttg 39534
>emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3, complete sequence Length = 148521 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 29009 aagggcaaaaagcagaacaa 28990
>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence Length = 193547 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 cacaaccttttcattttcttctgc 165 |||| ||||||||||||||||||| Sbjct: 174181 cacagccttttcattttcttctgc 174204
>emb|AL772407.4| Mouse DNA sequence from clone RP23-112N9 on chromosome 2, complete sequence Length = 202231 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 ttttcattttcttctgcttt 168 |||||||||||||||||||| Sbjct: 120761 ttttcattttcttctgcttt 120742
>gb|AC104620.5| Homo sapiens BAC clone RP11-294O2 from 4, complete sequence Length = 155643 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 25981 aagggcaaaaagcagaacaa 25962
>dbj|AB048984.1| Macaca fascicularis brain cDNA, clone:QnpA-13205 Length = 2347 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 2176 aagggcaaaaagcagaacaa 2157
>dbj|AB020863.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 6/11 Length = 156909 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 aagggcaaaaagcagaacaa 441 |||||||||||||||||||| Sbjct: 87454 aagggcaaaaagcagaacaa 87435 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,853,262 Number of Sequences: 3902068 Number of extensions: 5853262 Number of successful extensions: 117994 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117488 Number of HSP's gapped (non-prelim): 487 length of query: 601 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 578 effective length of database: 17,143,297,704 effective search space: 9908826072912 effective search space used: 9908826072912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
