>RBP1B_ARATH (Q8RWG8) Ran-binding protein 1 homolog b|
          Length = 217

 Score =  236 bits (603), Expect = 3e-62
 Identities = 116/158 (73%), Positives = 134/158 (84%)
 Frame = +3

Query: 186 TGAQVAPIVRLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
           TGAQVAPIVRLEEVAVTTGEEDED++LD+K+KLYRFDKDG+QWKERG GTVK LKH+ +G
Sbjct: 26  TGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYRFDKDGSQWKERGAGTVKFLKHRVSG 85

Query: 366 KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
           K+RLVMRQ+KTLKICANHLV S   +QEHAG+DKSCVWHA DF+DGELKDE+F IRF +V
Sbjct: 86  KIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCVWHARDFSDGELKDELFCIRFASV 145

Query: 546 ENCKKFKDLVDEIAESLAKDEDGESVEGSSAAGLLEKL 659
           ENCK F     E+AES  ++E  ES + S  AGLLEKL
Sbjct: 146 ENCKAFMQKFKEVAES--EEEKEESKDASDTAGLLEKL 181

>RBP1C_ARATH (P92985) Ran-binding protein 1 homolog c|
          Length = 219

 Score =  236 bits (601), Expect = 6e-62
 Identities = 113/158 (71%), Positives = 134/158 (84%)
 Frame = +3

Query: 186 TGAQVAPIVRLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
           TGAQVAPIVRLEEVAVTTGEEDED++LD+K+K+YRFDK+GNQWKERG GTVKLLKHKE G
Sbjct: 23  TGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKEGNQWKERGAGTVKLLKHKETG 82

Query: 366 KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
           KVRLVMRQ+KTLKICANHL+ S   +QEH+G++KSC+WHA DF+DGELKDE+F IRF ++
Sbjct: 83  KVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCLWHATDFSDGELKDELFCIRFASI 142

Query: 546 ENCKKFKDLVDEIAESLAKDEDGESVEGSSAAGLLEKL 659
           ENCK F +   EIAES  +    ES +G  AAGL+E L
Sbjct: 143 ENCKTFMEKFTEIAES--QQVGKESTQGDEAAGLIENL 178

>RBP1A_ARATH (Q9LMK7) Ran-binding protein 1 homolog a (Ran-binding protein|
           siRanBP)
          Length = 228

 Score =  233 bits (593), Expect = 5e-61
 Identities = 113/158 (71%), Positives = 130/158 (82%)
 Frame = +3

Query: 186 TGAQVAPIVRLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
           TGAQVAPIVRLEEVAVTTGEEDED++LD+K+KLYRFDKD NQWKERG GTVK LKHK  G
Sbjct: 24  TGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKDANQWKERGAGTVKFLKHKNTG 83

Query: 366 KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
           K+RLVMRQ+KTLKICANH V S   +QEH G++KSCVWHA DFADGELKDE+F IRF ++
Sbjct: 84  KIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGELKDELFCIRFASI 143

Query: 546 ENCKKFKDLVDEIAESLAKDEDGESVEGSSAAGLLEKL 659
           ENCK F     E+AES  ++E  ES + +  AGLLEKL
Sbjct: 144 ENCKTFMQKFKEVAES--EEEKEESKDAADTAGLLEKL 179

>RANG_SCHPO (Q09717) Ran-specific GTPase-activating protein 1 (Ran-binding|
           protein 1) (RANBP1) (Spi1-binding protein)
          Length = 215

 Score =  138 bits (348), Expect = 1e-32
 Identities = 71/134 (52%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
 Frame = +3

Query: 204 PIVRLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVM 383
           PIV+L  V   T EE+E     M+AKL+RFDK  ++WKERGTG  +LLKHKE GK RLVM
Sbjct: 77  PIVKLSAVETKTNEEEETVEFKMRAKLFRFDKAASEWKERGTGDARLLKHKETGKTRLVM 136

Query: 384 RQAKTLKICANHLVISTTKMQEHAGSDKSCVWH-AADFADGELKDEMFAIRFGTVENCKK 560
           R+ KTLK+CANHL++   K+  + GSD+S VW  AAD ++GE   E FAIRF   EN   
Sbjct: 137 RRDKTLKVCANHLLMPEMKLTPNVGSDRSWVWTVAADVSEGEPTAETFAIRFANSENANL 196

Query: 561 FKDLVDEIAESLAK 602
           FK+  ++  E  AK
Sbjct: 197 FKENFEKYQEENAK 210

>RANG_MOUSE (P34022) Ran-specific GTPase-activating protein (Ran-binding|
           protein 1) (RANBP1) (HpaII tiny fragments locus 9a
           protein)
          Length = 203

 Score =  138 bits (348), Expect = 1e-32
 Identities = 76/158 (48%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
 Frame = +3

Query: 195 QVAPIVRLEEVAVTTGEEDEDSLLDMKAKLYRF--DKDGNQWKERGTGTVKLLKHKENGK 368
           Q  PIV L E  + T EEDE+ L  M+AKL+RF  + D  +WKERGTG VKLLKHKE G 
Sbjct: 26  QFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGT 85

Query: 369 VRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHA-ADFADGELKDEMFAIRFGTV 545
           +RL+MR+ KTLKICANH +    +++ +AGSD++ VW+  ADFAD   K E+ AIRF   
Sbjct: 86  IRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNA 145

Query: 546 ENCKKFKDLVDEIAESLAKDEDGESVEGSSAAGLLEKL 659
           EN +KFK   +E  + + + E     +  +A  + EKL
Sbjct: 146 ENAQKFKTKFEECRKEIEEREKKGPGKNDNAEKVAEKL 183

>RANG_HUMAN (P43487) Ran-specific GTPase-activating protein (Ran-binding|
           protein 1) (RanBP1)
          Length = 201

 Score =  136 bits (343), Expect = 5e-32
 Identities = 77/158 (48%), Positives = 101/158 (63%), Gaps = 3/158 (1%)
 Frame = +3

Query: 195 QVAPIVRLEEVAVTTGEEDEDSLLDMKAKLYRF--DKDGNQWKERGTGTVKLLKHKENGK 368
           Q  PIV L E  + T EEDE+ L  M+AKL+RF  + D  +WKERGTG VKLLKHKE G 
Sbjct: 26  QFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGA 85

Query: 369 VRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHA-ADFADGELKDEMFAIRFGTV 545
           +RL+MR+ KTLKICANH +    +++ +AGSD++ VW+  ADFAD   K E+ AIRF   
Sbjct: 86  IRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNA 145

Query: 546 ENCKKFKDLVDEIAESLAKDEDGESVEGSSAAGLLEKL 659
           EN +KFK   +E  + +   E+ E   GS      EK+
Sbjct: 146 ENAQKFKTKFEECRKEI---EEREKKAGSGKNDHAEKV 180

>RBP2_HUMAN (P49792) Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein|
            Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270)
          Length = 3224

 Score =  133 bits (334), Expect = 5e-31
 Identities = 68/139 (48%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
 Frame = +3

Query: 189  GAQVAPIVRL-EEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
            G    P+V L +++ V TGEEDE+     +AKL+RFD +  +WKERG G VK+L+HK +G
Sbjct: 1169 GPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSG 1228

Query: 366  KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
            K+RL+MR+ + LKICANH +    K+  +AGSD+S VWHA D+AD   K E  AIRF T 
Sbjct: 1229 KIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTP 1288

Query: 546  ENCKKFKDLVDEIAESLAK 602
            E    FK   +E A+S+ K
Sbjct: 1289 EEAALFKCKFEE-AQSILK 1306



 Score =  124 bits (311), Expect = 2e-28
 Identities = 57/127 (44%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
 Frame = +3

Query: 204  PIVRL-EEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLV 380
            P+V++ E+V + TGEEDE  L   + KL+RFD + +QWKERG G +K+LK++ NGK+R++
Sbjct: 2015 PVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRML 2074

Query: 381  MRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKK 560
            MR+ + LK+CANH + +T  ++  +GSD++ +W A+DF+DG+ K E  A +F T E  ++
Sbjct: 2075 MRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEE 2134

Query: 561  FKDLVDE 581
            FK   +E
Sbjct: 2135 FKQKFEE 2141



 Score =  124 bits (310), Expect = 3e-28
 Identities = 61/137 (44%), Positives = 88/137 (64%)
 Frame = +3

Query: 204  PIVRLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVM 383
            PIV L EV V +GEEDE+ L   +AKLYR+D+D +QWKERG G +K+L H      R++M
Sbjct: 2914 PIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHTMKNYYRILM 2973

Query: 384  RQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKKF 563
            R+ +  K+CANH++  T +++    S+ + VW A+D+ADGE K E  A+RF T E    F
Sbjct: 2974 RRDQVFKVCANHVITKTMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEVADCF 3033

Query: 564  KDLVDEIAESLAKDEDG 614
            K   +E  ++L K + G
Sbjct: 3034 KKTFEECQQNLMKLQKG 3050



 Score =  120 bits (300), Expect = 5e-27
 Identities = 60/140 (42%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +3

Query: 189  GAQVAPIVRLEE-VAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
            G    P+V L + V V++GEE+E  +   +AKLYR+DKD  QWKERG G +K+L++ +N 
Sbjct: 2307 GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNK 2366

Query: 366  KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
            +VR+VMR+ + LK+CANH +     +Q   G+++  +W A DFADGE K E  A+RF   
Sbjct: 2367 QVRIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWLWTACDFADGERKVEHLAVRFKLQ 2426

Query: 546  ENCKKFKDLVDEIAESLAKD 605
            +    FK + DE   +  KD
Sbjct: 2427 DVADSFKKIFDEAKTAQEKD 2446

>RBP2_MOUSE (Q9ERU9) Ran-binding protein 2 (RanBP2)|
          Length = 3053

 Score =  132 bits (331), Expect = 1e-30
 Identities = 67/139 (48%), Positives = 92/139 (66%), Gaps = 1/139 (0%)
 Frame = +3

Query: 189  GAQVAPIVRL-EEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
            G    P+V L +++ V TGEEDE+     +AKL+RFD +  +WKERG G VK+L+HK +G
Sbjct: 1163 GPHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDGESKEWKERGIGNVKILRHKTSG 1222

Query: 366  KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
            K+RL+MR+ + LKICANH +    K+  +AGSD+S VWHA D+AD   K E  AIRF T 
Sbjct: 1223 KIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTP 1282

Query: 546  ENCKKFKDLVDEIAESLAK 602
            E    FK   +E A+++ K
Sbjct: 1283 EEAALFKCKFEE-AQNILK 1300



 Score =  124 bits (310), Expect = 3e-28
 Identities = 57/127 (44%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
 Frame = +3

Query: 204  PIVRL-EEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLV 380
            P+V++ E+V + TGEEDE  L   + KL+RFD + +QWKERG G +K+LK++ NGK+R++
Sbjct: 1852 PVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRML 1911

Query: 381  MRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKK 560
            MR+ + LK+CANH + +T  ++  +GSD++ +W A+DF+DG+ K E  A +F T E  ++
Sbjct: 1912 MRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQLAAKFKTPELAEE 1971

Query: 561  FKDLVDE 581
            FK   +E
Sbjct: 1972 FKQKFEE 1978



 Score =  121 bits (303), Expect = 2e-27
 Identities = 58/139 (41%), Positives = 90/139 (64%)
 Frame = +3

Query: 204  PIVRLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVM 383
            PIV L EV V +GEEDE+ L   +AKLYR+D+D +QWKERG G +K+L H      R++M
Sbjct: 2743 PIVSLPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIGDIKILWHTMKKYYRILM 2802

Query: 384  RQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKKF 563
            R+ +  K+CANH++    +++    S+ + VW A+D+ADGE K E  A+RF T E  + F
Sbjct: 2803 RRDQVFKVCANHVITKAMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEMTESF 2862

Query: 564  KDLVDEIAESLAKDEDGES 620
            K   ++  +++ K ++G +
Sbjct: 2863 KKKFEDSQQNIIKLQNGHT 2881



 Score =  120 bits (302), Expect = 3e-27
 Identities = 61/140 (43%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +3

Query: 189  GAQVAPIVRLEE-VAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
            G    P+V L + V V++GEE+E  +   +AKLYR+DKD  QWKERG G +K+L++ +N 
Sbjct: 2144 GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQNYDNK 2203

Query: 366  KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
            +VR+VMR+ + LK+CANH +     +Q   G+++  VW A DFADGE K E  A+RF   
Sbjct: 2204 QVRIVMRRDQVLKLCANHRITPDMTLQTMKGTERVWVWTACDFADGERKIEHLAVRFKLQ 2263

Query: 546  ENCKKFKDLVDEIAESLAKD 605
            +    FK + DE   +  KD
Sbjct: 2264 DVADSFKKIFDEAKTAQEKD 2283

>YRB1_YEAST (P41920) Ran-specific GTPase-activating protein 1 (Ran-binding|
           protein 1) (RANBP1) (Perinuclear array-localized
           protein)
          Length = 201

 Score =  131 bits (330), Expect = 2e-30
 Identities = 66/130 (50%), Positives = 91/130 (70%), Gaps = 1/130 (0%)
 Frame = +3

Query: 204 PIVRLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVM 383
           P+V LE+V V T EEDE+ L  ++AKL+RFD D  +WKERGTG  K LK+K+  KVR++M
Sbjct: 67  PVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILM 126

Query: 384 RQAKTLKICANHLVISTTKMQEHAGSDKSCVWH-AADFADGELKDEMFAIRFGTVENCKK 560
           R+ KTLKICANH++     ++ + GSD+S V+   AD A+GE +   FAIRFG+ EN  K
Sbjct: 127 RRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADK 186

Query: 561 FKDLVDEIAE 590
           FK+  ++  E
Sbjct: 187 FKEEFEKAQE 196

>RBP2_BOVIN (P48820) Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein|
            Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270)
            (Fragment)
          Length = 1085

 Score =  124 bits (311), Expect = 2e-28
 Identities = 59/138 (42%), Positives = 89/138 (64%)
 Frame = +3

Query: 204  PIVRLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVM 383
            PIV L EV V +GEEDE+ L   +AKLYR+D++ +QWK+RG G +K+L H      R++M
Sbjct: 775  PIVSLPEVEVKSGEEDEEILFKERAKLYRWDREASQWKDRGVGDIKILWHTVKNYFRILM 834

Query: 384  RQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKKF 563
            R+ +  K+CANH++  T +++    S+ + VW A+D+ADGE K E  A+RF T E    F
Sbjct: 835  RRDQVFKVCANHVITKTMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEMADCF 894

Query: 564  KDLVDEIAESLAKDEDGE 617
            K   +E  ++L K + G+
Sbjct: 895  KKKFEECQQNLLKPQKGQ 912



 Score =  123 bits (309), Expect = 4e-28
 Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +3

Query: 189 GAQVAPIVRLEE-VAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
           G    P+V L + V V++GEE+E  +   +AKLYR+DKD  QWKERG G +K+L++ EN 
Sbjct: 172 GQHFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDAGQWKERGIGDIKILQNYENK 231

Query: 366 KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
           +VR+VMR+ + LK+CANH +     +Q   G+++  VW A DFADGE K E  A+RF   
Sbjct: 232 QVRIVMRRDQVLKLCANHRITPDMTLQNMKGTERVWVWTACDFADGERKIEHLAVRFKLQ 291

Query: 546 ENCKKFKDLVDEIAESLAKD 605
           +    FK + DE   +  KD
Sbjct: 292 DVADSFKKIFDEAKVAQEKD 311

>RBP26_HUMAN (Q68DN6) Ran-binding protein 2-like 6 (RanBP2L6)|
          Length = 1748

 Score =  120 bits (300), Expect = 5e-27
 Identities = 60/140 (42%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +3

Query: 189  GAQVAPIVRLEE-VAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
            G    P+V L + V V++GEE+E  +   +A+LYR+DKD  QWKERG G +K+L++ +N 
Sbjct: 1316 GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAELYRYDKDVGQWKERGIGDIKILQNYDNK 1375

Query: 366  KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
            +VR+VMR+ + LK+CANH +     +Q   G+++  VW A DFADGE K E  A+RF   
Sbjct: 1376 QVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQ 1435

Query: 546  ENCKKFKDLVDEIAESLAKD 605
            +    FK + DE   +  KD
Sbjct: 1436 DVADSFKKIFDEAKTAQEKD 1455



 Score =  117 bits (293), Expect = 3e-26
 Identities = 56/127 (44%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +3

Query: 204  PIVRL-EEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLV 380
            P+V++ E+V + TGEE E  L     KL+RFD + +QWKERG G +K+LK++ NGK R++
Sbjct: 1024 PVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEISQWKERGLGNLKILKNEVNGKPRML 1083

Query: 381  MRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKK 560
            MR+ + LK+CANH + +T  ++  +GSD++ +W A+DF+DG+ K E  A +F T E  ++
Sbjct: 1084 MRRDQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLERLAAQFKTPELAEE 1143

Query: 561  FKDLVDE 581
            FK   +E
Sbjct: 1144 FKQKFEE 1150

>RBP22_HUMAN (Q53T03) Ran-binding protein 2-like 2 (RanBP2L2)|
          Length = 1765

 Score =  120 bits (300), Expect = 5e-27
 Identities = 56/127 (44%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +3

Query: 204  PIVRL-EEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLV 380
            P+V++ E+V + TGEE E  L     KL+RFD +  QWKERG G +K+LK++ NGK+R++
Sbjct: 1039 PVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRML 1098

Query: 381  MRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKK 560
            MR+ + LK+CANH + +T  ++  +GSD++ +W A+DF+DG+ K E  A +F T E  ++
Sbjct: 1099 MRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEE 1158

Query: 561  FKDLVDE 581
            FK   +E
Sbjct: 1159 FKQKFEE 1165



 Score =  119 bits (298), Expect = 8e-27
 Identities = 59/140 (42%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +3

Query: 189  GAQVAPIVRLEE-VAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
            G    P+V L + V V++GEE+E  +   +A++YR+DKD  QWKERG G +K+L++ +N 
Sbjct: 1331 GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKILQNYDNK 1390

Query: 366  KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
            +VR+VMR+ + LK+CANH +     +Q   G+++  VW A DFADGE K E  A+RF   
Sbjct: 1391 QVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQ 1450

Query: 546  ENCKKFKDLVDEIAESLAKD 605
            +    FK + DE   +  KD
Sbjct: 1451 DVADSFKKIFDEAKTAQEKD 1470

>RBP23_HUMAN (O14715) Ran-binding protein 2-like 3 (RanBP2L3) (Fragment)|
          Length = 755

 Score =  120 bits (300), Expect = 5e-27
 Identities = 56/127 (44%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +3

Query: 204 PIVRL-EEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLV 380
           P+V++ E+V + TGEE E  L     KL+RFD +  QWKERG G +K+LK++ NGK+R++
Sbjct: 29  PVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVRQWKERGLGNLKILKNEVNGKLRML 88

Query: 381 MRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKK 560
           MR+ + LK+CANH + +T  ++  +GSD++ +W A+DF+DG+ K E  A +F T E  ++
Sbjct: 89  MRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASDFSDGDAKLERLAAKFKTPELAEE 148

Query: 561 FKDLVDE 581
           FK   +E
Sbjct: 149 FKQKFEE 155



 Score =  119 bits (298), Expect = 8e-27
 Identities = 59/140 (42%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +3

Query: 189 GAQVAPIVRLEE-VAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
           G    P+V L + V V++GEE+E  +   +A++YR+DKD  QWKERG G +K+L++ +N 
Sbjct: 321 GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKILQNYDNK 380

Query: 366 KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
           +VR+VMR+ + LK+CANH +     +Q   G+++  VW A DFADGE K E  A+RF   
Sbjct: 381 QVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQ 440

Query: 546 ENCKKFKDLVDEIAESLAKD 605
           +    FK + DE   +  KD
Sbjct: 441 DVADSFKKIFDEAKTAQEKD 460

>RGPD8_HUMAN (Q99666) RANBP2-like and GRIP domain-containing protein 8|
            (Ran-binding protein 2-like 1) (RanBP2L1) (Sperm membrane
            protein BS-63)
          Length = 1765

 Score =  119 bits (298), Expect = 8e-27
 Identities = 59/140 (42%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +3

Query: 189  GAQVAPIVRLEE-VAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENG 365
            G    P+V L + V V++GEE+E  +   +A++YR+DKD  QWKERG G +K+L++ +N 
Sbjct: 1331 GQYFEPVVPLPDLVEVSSGEENEQVVFSHRAEIYRYDKDVGQWKERGIGDIKILQNYDNK 1390

Query: 366  KVRLVMRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTV 545
            +VR+VMR+ + LK+CANH +     +Q   G+++  VW A DFADGE K E  A+RF   
Sbjct: 1391 QVRIVMRRDQVLKLCANHRITPDMSLQNMKGTERVWVWTACDFADGERKVEHLAVRFKLQ 1450

Query: 546  ENCKKFKDLVDEIAESLAKD 605
            +    FK + DE   +  KD
Sbjct: 1451 DVADSFKKIFDEAKTAQEKD 1470



 Score =  117 bits (294), Expect = 2e-26
 Identities = 55/127 (43%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +3

Query: 204  PIVRL-EEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLV 380
            P+V++ E+V + TGEE E  L     KL+RFD + +QWKERG G +K+LK++ NGK+R++
Sbjct: 1039 PVVQMPEKVELVTGEEGEKVLYSQGVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRML 1098

Query: 381  MRQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKK 560
            MR+ + LK+CANH + +T  ++  +GSD++ +W A+ F+DG+ K E  A +F T E  ++
Sbjct: 1099 MRREQVLKVCANHWITTTMNLKPLSGSDRAWMWSASHFSDGDAKLERLAAKFKTPELAEE 1158

Query: 561  FKDLVDE 581
            FK   +E
Sbjct: 1159 FKQKFEE 1165

>YRB2_YEAST (P40517) Ran-specific GTPase-activating protein 2 (Ran-binding|
           protein 2) (RANBP2)
          Length = 327

 Score = 57.0 bits (136), Expect = 5e-08
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
 Frame = +3

Query: 210 VRLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKEN-GKVRLVMR 386
           ++L++  V +GEE E+ +  + AKLY+       WKERG G +K+ K K++  K R+VMR
Sbjct: 198 LKLQKQEVKSGEESEECIYQVNAKLYQLSNIKEGWKERGVGIIKINKSKDDVEKTRIVMR 257

Query: 387 QAKTLKICAN-HLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKKF 563
               LK+  N  LV   T  +   GS +S  +      D       +AI+ G  E   + 
Sbjct: 258 SRGILKVILNIQLVKGFTVQKGFTGSLQSEKFIRLLAVDDNGDPAQYAIKTGKKETTDEL 317

Query: 564 KDLV 575
            +++
Sbjct: 318 YNII 321

>RANB3_MACFA (Q4R4T9) Ran-binding protein 3 (RanBP3)|
          Length = 499

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
 Frame = +3

Query: 216 LEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKL--LKHKENGKV--RLVM 383
           LE+V V TGEE E ++L M+ KL+ FDK    W ERG G ++L  +   ++G +  RLVM
Sbjct: 318 LEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVM 377

Query: 384 RQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELK 512
           R   +L++  N  +    +MQ    S+KS    A D  D  +K
Sbjct: 378 RTQGSLRLILNTKL--WAQMQIDKASEKSIRITAMDTEDQGVK 418

>RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)|
          Length = 567

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
 Frame = +3

Query: 216 LEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKL--LKHKENGKV--RLVM 383
           LE+V V TGEE E ++L M+ KL+ FDK    W ERG G ++L  +   ++G +  RLVM
Sbjct: 386 LEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVM 445

Query: 384 RQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELK 512
           R   +L++  N  +    +MQ    S+KS    A D  D  +K
Sbjct: 446 RTQGSLRLILNTKL--WAQMQIDKASEKSIRITAMDTEDQGVK 486

>RANB3_PONPY (Q5R4Y2) Ran-binding protein 3 (RanBP3)|
          Length = 494

 Score = 56.6 bits (135), Expect = 6e-08
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
 Frame = +3

Query: 216 LEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKL--LKHKENGKV--RLVM 383
           LE+V V TGEE E ++L M+ KL+ FDK    W ERG G ++L  +   ++G +  RLVM
Sbjct: 313 LEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVM 372

Query: 384 RQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELK 512
           R   +L++  N  +    +MQ    S+KS    A D  D  +K
Sbjct: 373 RTQGSLRLILNTKL--WAQMQIDKASEKSIRITAMDTEDQVVK 413

>RANB3_MOUSE (Q9CT10) Ran-binding protein 3 (RanBP3)|
          Length = 491

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
 Frame = +3

Query: 216 LEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKL--LKHKENGKV--RLVM 383
           LE+V V TGEE E ++L ++ KL+ FDK    W ERG G ++L  +   ++G +  RLVM
Sbjct: 310 LEKVEVITGEEAESNVLQIQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVM 369

Query: 384 RQAKTLKICANHLVISTTKMQEHAGSDKSCVWHAADFADGELK 512
           R   +L++  N  +    +MQ    S+KS    A D  D  +K
Sbjct: 370 RTQGSLRLILNTKL--WAQMQMDKASEKSIRITATDAEDQGVK 410

>NUP2_YEAST (P32499) Nucleoporin NUP2 (Nuclear pore protein NUP2) (p95)|
          Length = 720

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
 Frame = +3

Query: 225 VAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKEN-GKVRLVMRQAKTL 401
           + +  GEEDE +L   KAKL  F+ +   +  RG G +KLLK K++  KVRL+ R     
Sbjct: 597 INLQNGEEDEVALFSQKAKLMTFNAETKSYDSRGVGEMKLLKKKDDPSKVRLLCRSDGMG 656

Query: 402 KICANHLVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKKFKDLVDE 581
            +  N  V+ + K +  A  + + +      ADG+L    + ++F   E  + F   +++
Sbjct: 657 NVLLNATVVDSFKYEPLAPGNDNLIKAPTVAADGKL--VTYIVKFKQKEEGRSFTKAIED 714

Query: 582 IAESL 596
             + +
Sbjct: 715 AKKEM 719

>HBA1_SCHPO (Q09146) Brefeldin A resistance protein (Caffeine resistance|
           protein 1)
          Length = 399

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
 Frame = +3

Query: 213 RLEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVK--LLKHKENGKVRLVMR 386
           +L +  + TGEE+E+S+  ++A+LY    +   WKERG G +K  + K + +G  RL+MR
Sbjct: 262 QLSDSEIITGEEEEESIFSVRARLYVVADEKKTWKERGQGILKVNVPKQRGSGSGRLLMR 321

Query: 387 QAKTLKICAN 416
                ++  N
Sbjct: 322 NDAVHRVIMN 331

>NGK7_SCHPO (Q9USL4) Putative nucleoporin C18B5.07c|
          Length = 565

 Score = 47.4 bits (111), Expect = 4e-05
 Identities = 34/124 (27%), Positives = 63/124 (50%)
 Frame = +3

Query: 240 GEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVMRQAKTLKICANH 419
           GEE+EDS+ + +AK+YRFD     + + G G +K+   ++ G  R++ R   + K+  N 
Sbjct: 448 GEENEDSVFETRAKIYRFDATSKSYSDIGIGPLKINVDRDTGSARILARVEGSGKLLLN- 506

Query: 420 LVISTTKMQEHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKKFKDLVDEIAESLA 599
             +   +  E++ + K  V   A   DG+   EM+ IR       +K    ++E  + ++
Sbjct: 507 --VRLCQDFEYSLAGKKDVKVPAASTDGK-SIEMYLIRVKEPSTAEKLLAELNE--KKVS 561

Query: 600 KDED 611
           K E+
Sbjct: 562 KSEN 565

>NUP50_HUMAN (Q9UKX7) Nucleoporin 50 kDa (Nuclear pore-associated protein 60|
           kDa-like)
          Length = 468

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 21/52 (40%), Positives = 31/52 (59%)
 Frame = +3

Query: 231 VTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVMR 386
           V T  ++ED+    K KL  F K  N++KE+G GT+  LK   N K +L++R
Sbjct: 348 VVTEVKEEDAFYSKKCKL--FYKKDNEFKEKGIGTLH-LKPTANQKTQLLVR 396

>NUP50_RAT (O08587) Nucleoporin 50 kDa (Nuclear pore-associated protein 60|
           kDa-like)
          Length = 467

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = +3

Query: 231 VTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVMR 386
           V T  ++ED+    K KL  F K  N++KE+G GT+  LK     K +L++R
Sbjct: 347 VVTEVKEEDAFYSKKCKL--FYKKDNEFKEKGVGTLH-LKPTATQKTQLLVR 395

>NUP50_MOUSE (Q9JIH2) Nucleoporin 50 kDa (Nuclear pore-associated protein 60|
           kDa-like)
          Length = 466

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = +3

Query: 231 VTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVMR 386
           V T  ++ED+    K KL  F K  N++KE+G GT+  LK     K +L++R
Sbjct: 346 VVTEVKEEDAFYSKKCKL--FYKKDNEFKEKGVGTLH-LKPTATQKTQLLVR 394

>SMC2_YEAST (P38989) Structural maintenance of chromosome 2 (DA-box protein|
           SMC2)
          Length = 1170

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 4/147 (2%)
 Frame = +3

Query: 216 LEEVAVTTGEEDEDSLLDMKAKLYRFDKDGNQWKERGTGTVKLLKHKENGKVRLVMRQAK 395
           L E    T EE +   L+   +  +  K+    KE   GT+  L++KENG +  + R   
Sbjct: 263 LNEFVKKTSEEIDS--LNEDVEEIKLQKEKELHKE---GTISKLENKENGLLNEISRLKT 317

Query: 396 TLKICANHLVISTTKMQ----EHAGSDKSCVWHAADFADGELKDEMFAIRFGTVENCKKF 563
           +L I   +L  +T K +    E A S    +   + +A+ E   +M        E   K 
Sbjct: 318 SLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKM------VQEQLSKQ 371

Query: 564 KDLVDEIAESLAKDEDGESVEGSSAAG 644
           +DL     E ++    G S  G++  G
Sbjct: 372 RDLYKRKEELVSTLTTGISSTGAADGG 398

>DXS_CHLCV (Q823V1) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 644

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 442 IFVVEITKWLAQILSVLAWRITRRTLPFSLCLSSLTVPVPL 320
           +F  +I KWL +I       I+RR+   S+CL SL  P+P+
Sbjct: 204 LFSRKIEKWLTKIPRY-GNSISRRSHKLSICLKSLFCPIPI 243


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,426,457
Number of Sequences: 219361
Number of extensions: 1030306
Number of successful extensions: 3665
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3657
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)