ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd27p21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z68903.1|SCCPN60 S.cereale cv. Petkus "Halo" encoding cpn60 Length = 1707 Score = 803 bits (405), Expect = 0.0 Identities = 477/499 (95%), Gaps = 3/499 (0%) Strand = Plus / Minus Query: 156 atctctcaaaacttggttcatgctaccaaaaattaaaccacatcctctggagagactcca 215 ||||||||||||||||| ||||||||||||| ||||||||| || || ||||| |||| Sbjct: 1571 atctctcaaaacttggtccatgctaccaaaa-ttaaaccacgtcatccggagaaactcgg 1513 Query: 216 cc--gtcgctcatcagtatccgaagccggagttgtccatggggttgacgaggggcgcggg 273 || ||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1512 ccatgtcactcatcagtatccgaagccggagttgtccatggggttggcgaggggcgcggc 1453 Query: 274 ctcaggctccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccga 333 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1452 ctcaggctccttgatctcgacgaccaccacgtcggacgtcaggaaggtcttggccaccga 1393 Query: 334 cgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 393 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1392 tgcggcgtgctccaggcaacatctcaccaccttggtggggtcgatgataccagcagccat 1333 Query: 394 caagtcctcgtactgcccagtggctgcgttgtagccgaacttgaagttgtcgttagaaag 453 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1332 caagtcctcgtactgcccagtggcagcgttgtagccgaacttgaagttgtcgttagaaag 1273 Query: 454 aaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaacttgagtgg 513 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1272 aaccttctcggtaacaacactgccattgacaccggcattcttggcgatcaacttgagtgg 1213 Query: 514 gtagcacagcgccctcctcactatctcagctccgaccttctgctcgncgttctccagggt 573 ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1212 gtagcacagtgccctcctcactatctcagctccgaccttctgctcgtcgttctccagggt 1153 Query: 574 gtccttgatggcatcaaccttagcagccagcctcaaaagagtgcaccctccaccaacaac 633 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1152 gtccttgatggcatcaaccttagcagccagcctcaaaagggtgcaccctccaccaacaac 1093 Query: 634 aataccttcctcaacggca 652 ||||||||||||||||||| Sbjct: 1092 aataccttcctcaacggca 1074 Score = 137 bits (69), Expect = 5e-29 Identities = 98/104 (94%), Gaps = 3/104 (2%) Strand = Plus / Minus Query: 19 gtaaaacgagngccgtaagtctgttccaattacatcaagcaaatttccgctaaatgtttc 78 ||||||| || |||||| | ||||||||||||||||||| |||||||||||||||||||| Sbjct: 1707 gtaaaacaagagccgtatg-ctgttccaattacatcaag-aaatttccgctaaatgtttc 1650 Query: 79 tctgcttatttcgccgttctggcaggcacatcacattgcatttt 122 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1649 tctgcttatttcgccgttctggc-ggcacatcacattgcatttt 1607
>ref|NM_185419.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2131 Score = 450 bits (227), Expect = e-123 Identities = 376/426 (88%) Strand = Plus / Minus Query: 223 tcatcagtatccgaagccggagttgtccatggggttgacgaggggcgcgggctcaggctc 282 ||||||||| ||| |||||||||||||||| |||||| || |||||| ||||||||||| Sbjct: 1898 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 1839 Query: 283 cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 342 ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| ||||| Sbjct: 1838 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 1779 Query: 343 ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 402 ||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1778 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 1719 Query: 403 gtactgcccagtggctgcgttgtagccgaacttgaagttgtcgttagaaagaaccttctc 462 |||||| ||||| || || ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 1718 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 1659 Query: 463 ggtaacaacactgccattgacaccagcattcttggcgatcaacttgagtgggtagcacag 522 ||||||||| || ||||| |||||||||||||| || ||||| || || ||||||| ||| Sbjct: 1658 ggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgggtagctcag 1599 Query: 523 cgccctcctcactatctcagctccgaccttctgctcgncgttctccagggtgtccttgat 582 ||| ||||| || || |||||||| ||||||||||| | ||||||||| |||||||||| Sbjct: 1598 cgctctccttacaatttcagctccaaccttctgctcatcattctccaggttgtccttgat 1539 Query: 583 ggcatcaaccttagcagccagcctcaaaagagtgcaccctccaccaacaacaataccttc 642 ||| ||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 1538 ggcgtcaactctagctgccagtctcagaagagtgcaccctccaccaacaacaataccttc 1479 Query: 643 ctcaac 648 |||||| Sbjct: 1478 ctcaac 1473
>dbj|AK101334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034I03, full insert sequence Length = 2131 Score = 450 bits (227), Expect = e-123 Identities = 376/426 (88%) Strand = Plus / Minus Query: 223 tcatcagtatccgaagccggagttgtccatggggttgacgaggggcgcgggctcaggctc 282 ||||||||| ||| |||||||||||||||| |||||| || |||||| ||||||||||| Sbjct: 1898 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 1839 Query: 283 cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 342 ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| ||||| Sbjct: 1838 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 1779 Query: 343 ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 402 ||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1778 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 1719 Query: 403 gtactgcccagtggctgcgttgtagccgaacttgaagttgtcgttagaaagaaccttctc 462 |||||| ||||| || || ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 1718 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 1659 Query: 463 ggtaacaacactgccattgacaccagcattcttggcgatcaacttgagtgggtagcacag 522 ||||||||| || ||||| |||||||||||||| || ||||| || || ||||||| ||| Sbjct: 1658 ggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgggtagctcag 1599 Query: 523 cgccctcctcactatctcagctccgaccttctgctcgncgttctccagggtgtccttgat 582 ||| ||||| || || |||||||| ||||||||||| | ||||||||| |||||||||| Sbjct: 1598 cgctctccttacaatttcagctccaaccttctgctcatcattctccaggttgtccttgat 1539 Query: 583 ggcatcaaccttagcagccagcctcaaaagagtgcaccctccaccaacaacaataccttc 642 ||| ||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 1538 ggcgtcaactctagctgccagtctcagaagagtgcaccctccaccaacaacaataccttc 1479 Query: 643 ctcaac 648 |||||| Sbjct: 1478 ctcaac 1473
>dbj|AK062098.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A02, full insert sequence Length = 1781 Score = 450 bits (227), Expect = e-123 Identities = 376/426 (88%) Strand = Plus / Minus Query: 223 tcatcagtatccgaagccggagttgtccatggggttgacgaggggcgcgggctcaggctc 282 ||||||||| ||| |||||||||||||||| |||||| || |||||| ||||||||||| Sbjct: 1566 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 1507 Query: 283 cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 342 ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| ||||| Sbjct: 1506 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 1447 Query: 343 ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 402 ||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1446 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 1387 Query: 403 gtactgcccagtggctgcgttgtagccgaacttgaagttgtcgttagaaagaaccttctc 462 |||||| ||||| || || ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 1386 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 1327 Query: 463 ggtaacaacactgccattgacaccagcattcttggcgatcaacttgagtgggtagcacag 522 ||||||||| || ||||| |||||||||||||| || ||||| || || ||||||| ||| Sbjct: 1326 ggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgggtagctcag 1267 Query: 523 cgccctcctcactatctcagctccgaccttctgctcgncgttctccagggtgtccttgat 582 ||| ||||| || || |||||||| ||||||||||| | ||||||||| |||||||||| Sbjct: 1266 cgctctccttacaatttcagctccaaccttctgctcatcattctccaggttgtccttgat 1207 Query: 583 ggcatcaaccttagcagccagcctcaaaagagtgcaccctccaccaacaacaataccttc 642 ||| ||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 1206 ggcgtcaactctagctgccagtctcagaagagtgcaccctccaccaacaacaataccttc 1147 Query: 643 ctcaac 648 |||||| Sbjct: 1146 ctcaac 1141
>dbj|AK060117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E09, full insert sequence Length = 1097 Score = 450 bits (227), Expect = e-123 Identities = 376/426 (88%) Strand = Plus / Minus Query: 223 tcatcagtatccgaagccggagttgtccatggggttgacgaggggcgcgggctcaggctc 282 ||||||||| ||| |||||||||||||||| |||||| || |||||| ||||||||||| Sbjct: 892 tcatcagtacccgtagccggagttgtccatcgggttggtgacgggcgcaggctcaggctc 833 Query: 283 cttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatg 342 ||||||||||||||| || || ||||| || ||||| ||||||||||||||||| ||||| Sbjct: 832 cttgatctcgacgacgacgacatccgatgtgaggaatgtcttggccaccgacgcagcatg 773 Query: 343 ctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctc 402 ||| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 772 ctcaagacaacatctcaccaccttagtggggtcaatgataccagcagccatcaaatcctc 713 Query: 403 gtactgcccagtggctgcgttgtagccgaacttgaagttgtcgttagaaagaaccttctc 462 |||||| ||||| || || ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 712 gtactgtccagttgcagcattgtaaccaaacttgaagttatcgttagagagaaccttctc 653 Query: 463 ggtaacaacactgccattgacaccagcattcttggcgatcaacttgagtgggtagcacag 522 ||||||||| || ||||| |||||||||||||| || ||||| || || ||||||| ||| Sbjct: 652 ggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgggtagctcag 593 Query: 523 cgccctcctcactatctcagctccgaccttctgctcgncgttctccagggtgtccttgat 582 ||| ||||| || || |||||||| ||||||||||| | ||||||||| |||||||||| Sbjct: 592 cgctctccttacaatttcagctccaaccttctgctcatcattctccaggttgtccttgat 533 Query: 583 ggcatcaaccttagcagccagcctcaaaagagtgcaccctccaccaacaacaataccttc 642 ||| ||||| |||| ||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 532 ggcgtcaactctagctgccagtctcagaagagtgcaccctccaccaacaacaataccttc 473 Query: 643 ctcaac 648 |||||| Sbjct: 472 ctcaac 467
>gb|AY675582.1| Zea mays RuBisCo subunit binding-protein beta subunit mRNA, partial cds Length = 1471 Score = 404 bits (204), Expect = e-109 Identities = 374/431 (86%) Strand = Plus / Minus Query: 222 ctcatcagtatccgaagccggagttgtccatggggttgacgaggggcgcgggctcaggct 281 ||||||||||||| |||| ||||||||||| ||||| ||| || | | ||| |||| Sbjct: 1235 ctcatcagtatccatagccagagttgtccatcgggtttgcgacaggtgtagcctccggct 1176 Query: 282 ccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcat 341 ||||||| ||||||||||| || || || ||||||||||||||||||||||||||||| | Sbjct: 1175 ccttgatatcgacgaccacaacatctgatgtcaggaaggtcttggccaccgacgcggcgt 1116 Query: 342 gctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcct 401 |||||| ||| |||||||||||||| |||||||| ||||||||||||||||||| ||||| Sbjct: 1115 gctccaagcagcatctcaccaccttggtggggtcaatgataccagcagccatcaggtcct 1056 Query: 402 cgtactgcccagtggctgcgttgtagccgaacttgaagttgtcgttagaaagaaccttct 461 ||||||| ||||| || || ||||| || |||||||||| || |||||||| ||||||| Sbjct: 1055 cgtactgtccagtagcagcattgtaaccatacttgaagttatcattagaaaggaccttct 996 Query: 462 cggtaacaacactgccattgacaccagcattcttggcgatcaacttgagtgggtagcaca 521 | || |||||||||||||||||||| || || || || ||||| || |||||||||| || Sbjct: 995 cagtgacaacactgccattgacaccggcgtttttagcaatcaatttaagtgggtagctca 936 Query: 522 gcgccctcctcactatctcagctccgaccttctgctcgncgttctccagggtgtccttga 581 | |||||||||||||| |||||||| |||||||||||| |||||||||| || ||||||| Sbjct: 935 gggccctcctcactatttcagctccaaccttctgctcgtcgttctccagtgtatccttga 876 Query: 582 tggcatcaaccttagcagccagcctcaaaagagtgcaccctccaccaacaacaatacctt 641 |||| || || ||||| || |||| |||||||||||||||||| |||||||||||||||| Sbjct: 875 tggcgtcgactttagctgcaagccgcaaaagagtgcaccctcccccaacaacaatacctt 816 Query: 642 cctcaacggca 652 ||||||||||| Sbjct: 815 cctcaacggca 805
>gb|AY103778.1| Zea mays PCO063180 mRNA sequence Length = 2338 Score = 385 bits (194), Expect = e-103 Identities = 364/421 (86%) Strand = Plus / Minus Query: 228 agtatccgaagccggagttgtccatggggttgacgaggggcgcgggctcaggctccttga 287 ||||||| |||| ||||||||||| ||||| | |||||||| | ||| |||||||| | Sbjct: 2034 agtatccatagccagagttgtccatcgggttagcaaggggcgcagactctggctccttaa 1975 Query: 288 tctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctcca 347 | ||||||||||| || || || ||||||||||||||||||||||||||||||||||||| Sbjct: 1974 tatcgacgaccacaacatcagatgtcaggaaggtcttggccaccgacgcggcatgctcca 1915 Query: 348 ggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctcgtact 407 || ||||||||||||||||| || || ||||||||||||||||||||||||||||||| Sbjct: 1914 aacagcatctcaccaccttagtaggatcaatgataccagcagccatcaagtcctcgtact 1855 Query: 408 gcccagtggctgcgttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaa 467 | ||||| || || ||||| || |||||||||| ||||||||||| |||||||| || | Sbjct: 1854 gtccagtagcagcattgtaaccatacttgaagttatcgttagaaaggaccttctcagtga 1795 Query: 468 caacactgccattgacaccagcattcttggcgatcaacttgagtgggtagcacagcgccc 527 | || |||||||||||||| ||||| || || ||||| || |||||||||| ||| |||| Sbjct: 1794 cgacgctgccattgacaccggcatttttagcaatcaatttaagtgggtagctcagggccc 1735 Query: 528 tcctcactatctcagctccgaccttctgctcgncgttctccagggtgtccttgatggcat 587 |||| ||||| |||||||| ||||||||||| |||||||||| || ||||||||||||| Sbjct: 1734 tccttactatttcagctccaaccttctgctcatcgttctccagtgtatccttgatggcat 1675 Query: 588 caaccttagcagccagcctcaaaagagtgcaccctccaccaacaacaataccttcctcaa 647 | || ||||| || |||| |||||| ||||| |||||||||||||||||||||||||||| Sbjct: 1674 cgactttagctgcaagccgcaaaagggtgcatcctccaccaacaacaataccttcctcaa 1615 Query: 648 c 648 | Sbjct: 1614 c 1614
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Plus Query: 239 ccggagttgtccatggggttgacgaggggcgcgggctcaggctccttgatctcgacgacc 298 |||||||||||||| |||||| || |||||| |||||||||||||||||||||||||| Sbjct: 810397 ccggagttgtccatcgggttggtgacgggcgcaggctcaggctccttgatctcgacgacg 810456 Query: 299 accacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctc 358 || || ||||| || ||||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 810457 acgacatccgatgtgaggaatgtcttggccaccgacgcagcatgctcaagacaacatctc 810516 Query: 359 accacct 365 ||||||| Sbjct: 810517 accacct 810523 Score = 123 bits (62), Expect = 8e-25 Identities = 91/101 (90%) Strand = Plus / Plus Query: 548 accttctgctcgncgttctccagggtgtccttgatggcatcaaccttagcagccagcctc 607 ||||||||||| | ||||||||| ||||||||||||| ||||| |||| ||||| ||| Sbjct: 811408 accttctgctcatcattctccaggttgtccttgatggcgtcaactctagctgccagtctc 811467 Query: 608 aaaagagtgcaccctccaccaacaacaataccttcctcaac 648 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 811468 agaagagtgcaccctccaccaacaacaataccttcctcaac 811508 Score = 113 bits (57), Expect = 7e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggctgcg 421 |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| || || Sbjct: 810972 accttagtggggtcaatgataccagcagccatcaaatcctcgtactgtccagttgcagca 811031 Query: 422 ttgtagccgaacttgaagttgtcgttagaaagaacct 458 ||||| || ||||||||||| |||||||| ||||||| Sbjct: 811032 ttgtaaccaaacttgaagttatcgttagagagaacct 811068 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 454 aaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaacttgagtgg 513 |||||||||||||||||| || ||||| |||||||||||||| || ||||| || || || Sbjct: 811141 aaccttctcggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgg 811200 Query: 514 gtagcacagcgccctcctcactatctcagctccgacct 551 ||||| |||||| ||||| || || |||||||| |||| Sbjct: 811201 gtagctcagcgctctccttacaatttcagctccaacct 811238 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 364 cttagtggggtcgatgataccagcagccatcaagtcctcgtact 407 |||||||||||| || | |||||| |||| ||||||||||||| Sbjct: 806511 cttagtggggtcaatagtcccagcaaccattaagtcctcgtact 806554
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Plus Query: 239 ccggagttgtccatggggttgacgaggggcgcgggctcaggctccttgatctcgacgacc 298 |||||||||||||| |||||| || |||||| |||||||||||||||||||||||||| Sbjct: 93531 ccggagttgtccatcgggttggtgacgggcgcaggctcaggctccttgatctcgacgacg 93590 Query: 299 accacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctc 358 || || ||||| || ||||| ||||||||||||||||| |||||||| || ||||||||| Sbjct: 93591 acgacatccgatgtgaggaatgtcttggccaccgacgcagcatgctcaagacaacatctc 93650 Query: 359 accacct 365 ||||||| Sbjct: 93651 accacct 93657 Score = 123 bits (62), Expect = 8e-25 Identities = 91/101 (90%) Strand = Plus / Plus Query: 548 accttctgctcgncgttctccagggtgtccttgatggcatcaaccttagcagccagcctc 607 ||||||||||| | ||||||||| ||||||||||||| ||||| |||| ||||| ||| Sbjct: 94542 accttctgctcatcattctccaggttgtccttgatggcgtcaactctagctgccagtctc 94601 Query: 608 aaaagagtgcaccctccaccaacaacaataccttcctcaac 648 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 94602 agaagagtgcaccctccaccaacaacaataccttcctcaac 94642 Score = 113 bits (57), Expect = 7e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggctgcg 421 |||||||||||||| |||||||||||||||||||| ||||||||||| ||||| || || Sbjct: 94106 accttagtggggtcaatgataccagcagccatcaaatcctcgtactgtccagttgcagca 94165 Query: 422 ttgtagccgaacttgaagttgtcgttagaaagaacct 458 ||||| || ||||||||||| |||||||| ||||||| Sbjct: 94166 ttgtaaccaaacttgaagttatcgttagagagaacct 94202 Score = 83.8 bits (42), Expect = 7e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 454 aaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaacttgagtgg 513 |||||||||||||||||| || ||||| |||||||||||||| || ||||| || || || Sbjct: 94275 aaccttctcggtaacaacgcttccattaacaccagcattcttagcaatcaatttaagcgg 94334 Query: 514 gtagcacagcgccctcctcactatctcagctccgacct 551 ||||| |||||| ||||| || || |||||||| |||| Sbjct: 94335 gtagctcagcgctctccttacaatttcagctccaacct 94372 Score = 40.1 bits (20), Expect = 8.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 364 cttagtggggtcgatgataccagcagccatcaagtcctcgtact 407 |||||||||||| || | |||||| |||| ||||||||||||| Sbjct: 89645 cttagtggggtcaatagtcccagcaaccattaagtcctcgtact 89688
>ref|NM_179480.1| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.2 mRNA, complete cds Length = 2060 Score = 135 bits (68), Expect = 2e-28 Identities = 212/260 (81%) Strand = Plus / Minus Query: 242 gagttgtccatggggttgacgaggggcgcgggctcaggctccttgatctcgacgaccacc 301 ||||||||||| |||||| ||| ||| | || ||||| ||||||||||| || || || Sbjct: 1890 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1831 Query: 302 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 361 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1830 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1771 Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggctgcg 421 ||||| || || |||||||| || ||||||||||| |||||||||| || || || || Sbjct: 1770 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1711 Query: 422 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactgccattg 481 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1710 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1651 Query: 482 acaccagcattcttggcgat 501 |||||||||||||||||||| Sbjct: 1650 acaccagcattcttggcgat 1631 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttcctc 645 |||||||| || ||||||||||||||||||||||| Sbjct: 1521 agagtgcaaccaccaccaacaacaataccttcctc 1487
>ref|NM_104424.2| Arabidopsis thaliana CPN60B (CHAPERONIN 60 BETA); ATP binding / protein binding AT1G55490 (CPN60B) transcript variant AT1G55490.1 mRNA, complete cds Length = 2087 Score = 135 bits (68), Expect = 2e-28 Identities = 212/260 (81%) Strand = Plus / Minus Query: 242 gagttgtccatggggttgacgaggggcgcgggctcaggctccttgatctcgacgaccacc 301 ||||||||||| |||||| ||| ||| | || ||||| ||||||||||| || || || Sbjct: 1917 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1858 Query: 302 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 361 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1857 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1798 Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggctgcg 421 ||||| || || |||||||| || ||||||||||| |||||||||| || || || || Sbjct: 1797 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1738 Query: 422 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactgccattg 481 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1737 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1678 Query: 482 acaccagcattcttggcgat 501 |||||||||||||||||||| Sbjct: 1677 acaccagcattcttggcgat 1658 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttcctc 645 |||||||| || ||||||||||||||||||||||| Sbjct: 1548 agagtgcaaccaccaccaacaacaataccttcctc 1514
>gb|AY081501.1| Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (At1g55490) mRNA, complete cds Length = 1844 Score = 135 bits (68), Expect = 2e-28 Identities = 212/260 (81%) Strand = Plus / Minus Query: 242 gagttgtccatggggttgacgaggggcgcgggctcaggctccttgatctcgacgaccacc 301 ||||||||||| |||||| ||| ||| | || ||||| ||||||||||| || || || Sbjct: 1787 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1728 Query: 302 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 361 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1727 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1668 Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggctgcg 421 ||||| || || |||||||| || ||||||||||| |||||||||| || || || || Sbjct: 1667 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1608 Query: 422 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactgccattg 481 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1607 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1548 Query: 482 acaccagcattcttggcgat 501 |||||||||||||||||||| Sbjct: 1547 acaccagcattcttggcgat 1528 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttcctc 645 |||||||| || ||||||||||||||||||||||| Sbjct: 1418 agagtgcaaccaccaccaacaacaataccttcctc 1384
>gb|AF386945.1|AF386945 Arabidopsis thaliana Rubisco subunit binding-protein beta subunit (T5A14.11) mRNA, complete cds Length = 2060 Score = 135 bits (68), Expect = 2e-28 Identities = 212/260 (81%) Strand = Plus / Minus Query: 242 gagttgtccatggggttgacgaggggcgcgggctcaggctccttgatctcgacgaccacc 301 ||||||||||| |||||| ||| ||| | || ||||| ||||||||||| || || || Sbjct: 1909 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1850 Query: 302 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 361 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1849 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1790 Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggctgcg 421 ||||| || || |||||||| || ||||||||||| |||||||||| || || || || Sbjct: 1789 acctttgttggatcgatgattcctgcagccatcaaatcctcgtacttgccggttgcagca 1730 Query: 422 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactgccattg 481 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1729 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1670 Query: 482 acaccagcattcttggcgat 501 |||||||||||||||||||| Sbjct: 1669 acaccagcattcttggcgat 1650 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttcctc 645 |||||||| || ||||||||||||||||||||||| Sbjct: 1540 agagtgcaaccaccaccaacaacaataccttcctc 1506
>gb|BT018779.1| Zea mays clone EL01N0526C09.d mRNA sequence Length = 2155 Score = 133 bits (67), Expect = 8e-28 Identities = 264/330 (80%) Strand = Plus / Minus Query: 316 gaaggtcttggccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtc 375 |||||| || |||||||| || |||||||||| ||| || ||||| ||||| ||||| || Sbjct: 1792 gaaggttttcgccaccgatgcagcatgctccaagcagcacctcacaaccttggtgggatc 1733 Query: 376 gatgataccagcagccatcaagtcctcgtactgcccagtggctgcgttgtagccgaactt 435 |||||||||||||||||||||||||| |||| ||| || || || ||||| || || | Sbjct: 1732 aatgataccagcagccatcaagtcctcatactcccctgtagccgcattgtacccatacct 1673 Query: 436 gaagttgtcgttagaaagaaccttctcggtaacaacactgccattgacaccagcattctt 495 |||||| || || | |||||||||||| ||||| ||||||||||| || || ||||| || Sbjct: 1672 gaagttctcattggcaagaaccttctcagtaaccacactgccattaacgcctgcattttt 1613 Query: 496 ggcgatcaacttgagtgggtagcacagcgccctcctcactatctcagctccgaccttctg 555 || ||||| || ||||| |||| || | | |||| || || ||||| || |||||||| Sbjct: 1612 tgcaatcaatttaagtggatagctcaaggacttccttacaatttcagccccaaccttctg 1553 Query: 556 ctcgncgttctccagggtgtccttgatggcatcaaccttagcagccagcctcaaaagagt 615 || ||||||| ||||| || | || |||||||| || | || ||||||||||| || Sbjct: 1552 ttcatcgttctcaagggtctctataattgcatcaacttttgatgcaagcctcaaaagggt 1493 Query: 616 gcaccctccaccaacaacaataccttcctc 645 || || ||||| ||||| ||||||||||| Sbjct: 1492 acagccaccacctacaacgataccttcctc 1463
>gb|BT018139.1| Zea mays clone EL01N0554H01.c mRNA sequence Length = 975 Score = 133 bits (67), Expect = 8e-28 Identities = 264/330 (80%) Strand = Plus / Minus Query: 316 gaaggtcttggccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtc 375 |||||| || |||||||| || |||||||||| ||| || ||||| ||||| ||||| || Sbjct: 587 gaaggttttcgccaccgatgcagcatgctccaagcagcacctcacaaccttggtgggatc 528 Query: 376 gatgataccagcagccatcaagtcctcgtactgcccagtggctgcgttgtagccgaactt 435 |||||||||||||||||||||||||| |||| ||| || || || ||||| || || | Sbjct: 527 aatgataccagcagccatcaagtcctcatactcccctgtagccgcattgtacccatacct 468 Query: 436 gaagttgtcgttagaaagaaccttctcggtaacaacactgccattgacaccagcattctt 495 |||||| || || | |||||||||||| ||||| ||||||||||| || || ||||| || Sbjct: 467 gaagttctcattggcaagaaccttctcagtaaccacactgccattaacgcctgcattttt 408 Query: 496 ggcgatcaacttgagtgggtagcacagcgccctcctcactatctcagctccgaccttctg 555 || ||||| || ||||| |||| || | | |||| || || ||||| || |||||||| Sbjct: 407 tgcaatcaatttaagtggatagctcaaggacttccttacaatttcagccccaaccttctg 348 Query: 556 ctcgncgttctccagggtgtccttgatggcatcaaccttagcagccagcctcaaaagagt 615 || ||||||| ||||| || | || |||||||| || | || ||||||||||| || Sbjct: 347 ttcatcgttctcaagggtctctataattgcatcaacttttgatgcaagcctcaaaagggt 288 Query: 616 gcaccctccaccaacaacaataccttcctc 645 || || ||||| ||||| ||||||||||| Sbjct: 287 acagccaccacctacaacgataccttcctc 258
>gb|AY104969.1| Zea mays PCO070942 mRNA sequence Length = 2290 Score = 133 bits (67), Expect = 8e-28 Identities = 264/330 (80%) Strand = Plus / Minus Query: 316 gaaggtcttggccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtc 375 |||||| || |||||||| || |||||||||| ||| || ||||| ||||| ||||| || Sbjct: 1920 gaaggttttcgccaccgatgcagcatgctccaagcagcacctcacaaccttggtgggatc 1861 Query: 376 gatgataccagcagccatcaagtcctcgtactgcccagtggctgcgttgtagccgaactt 435 |||||||||||||||||||||||||| |||| ||| || || || ||||| || || | Sbjct: 1860 aatgataccagcagccatcaagtcctcatactcccctgtagccgcattgtacccatacct 1801 Query: 436 gaagttgtcgttagaaagaaccttctcggtaacaacactgccattgacaccagcattctt 495 |||||| || || | |||||||||||| ||||| ||||||||||| || || ||||| || Sbjct: 1800 gaagttctcattggcaagaaccttctcagtaaccacactgccattaacgcctgcattttt 1741 Query: 496 ggcgatcaacttgagtgggtagcacagcgccctcctcactatctcagctccgaccttctg 555 || ||||| || ||||| |||| || | | |||| || || ||||| || |||||||| Sbjct: 1740 tgcaatcaatttaagtggatagctcaaggacttccttacaatttcagccccaaccttctg 1681 Query: 556 ctcgncgttctccagggtgtccttgatggcatcaaccttagcagccagcctcaaaagagt 615 || ||||||| ||||| || | || |||||||| || | || ||||||||||| || Sbjct: 1680 ttcatcgttctcaagggtctctataattgcatcaacttttgatgcaagcctcaaaagggt 1621 Query: 616 gcaccctccaccaacaacaataccttcctc 645 || || ||||| ||||| ||||||||||| Sbjct: 1620 acagccaccacctacaacgataccttcctc 1591
>ref|XM_463795.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2155 Score = 127 bits (64), Expect = 5e-26 Identities = 258/323 (79%) Strand = Plus / Minus Query: 326 gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 385 ||||||||||| |||||||||| |||||||||||||||||| ||||| || || |||||| Sbjct: 1789 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1730 Query: 386 gcagccatcaagtcctcgtactgcccagtggctgcgttgtagccgaacttgaagttgtcg 445 ||||||||||| ||||| || | || || || || ||||| || || ||||||| || Sbjct: 1729 gcagccatcaaatcctcatattttcctgtagcggcattgtaaccatacctgaagttatca 1670 Query: 446 ttagaaagaaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaac 505 || | ||| |||||||| |||||||||||||| || ||||||||||| || || || || Sbjct: 1669 ttggcaaggaccttctcagtaacaacactgccgttaacaccagcattttttgctattaat 1610 Query: 506 ttgagtgggtagcacagcgccctcctcactatctcagctccgaccttctgctcgncgttc 565 || |||||||| | || | | |||| || || ||||| || |||||||| || | ||| Sbjct: 1609 ttaagtgggtaactcaaggacttccttacgatttcagccccaaccttctgttcatcattc 1550 Query: 566 tccagggtgtccttgatggcatcaaccttagcagccagcctcaaaagagtgcaccctcca 625 || || || || | ||||||||||| || | || |||| |||||| || || || || Sbjct: 1549 tcaagtgtttctataatggcatcaacttttgatgcaagccgcaaaagcgtacagccacct 1490 Query: 626 ccaacaacaataccttcctcaac 648 ||||||||||||||||||||||| Sbjct: 1489 ccaacaacaataccttcctcaac 1467
>ref|XM_506674.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1435_F07.26 mRNA Length = 2310 Score = 127 bits (64), Expect = 5e-26 Identities = 258/323 (79%) Strand = Plus / Minus Query: 326 gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 385 ||||||||||| |||||||||| |||||||||||||||||| ||||| || || |||||| Sbjct: 1809 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1750 Query: 386 gcagccatcaagtcctcgtactgcccagtggctgcgttgtagccgaacttgaagttgtcg 445 ||||||||||| ||||| || | || || || || ||||| || || ||||||| || Sbjct: 1749 gcagccatcaaatcctcatattttcctgtagcggcattgtaaccatacctgaagttatca 1690 Query: 446 ttagaaagaaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaac 505 || | ||| |||||||| |||||||||||||| || ||||||||||| || || || || Sbjct: 1689 ttggcaaggaccttctcagtaacaacactgccgttaacaccagcattttttgctattaat 1630 Query: 506 ttgagtgggtagcacagcgccctcctcactatctcagctccgaccttctgctcgncgttc 565 || |||||||| | || | | |||| || || ||||| || |||||||| || | ||| Sbjct: 1629 ttaagtgggtaactcaaggacttccttacgatttcagccccaaccttctgttcatcattc 1570 Query: 566 tccagggtgtccttgatggcatcaaccttagcagccagcctcaaaagagtgcaccctcca 625 || || || || | ||||||||||| || | || |||| |||||| || || || || Sbjct: 1569 tcaagtgtttctataatggcatcaacttttgatgcaagccgcaaaagcgtacagccacct 1510 Query: 626 ccaacaacaataccttcctcaac 648 ||||||||||||||||||||||| Sbjct: 1509 ccaacaacaataccttcctcaac 1487
>emb|BX814891.1|CNS0ADZ4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2000 Score = 127 bits (64), Expect = 5e-26 Identities = 212/260 (81%), Gaps = 1/260 (0%) Strand = Plus / Minus Query: 242 gagttgtccatggggttgacgaggggcgcgggctcaggctccttgatctcgacgaccacc 301 ||||||||||| |||||| ||| ||| | || ||||| ||||||||||| || || || Sbjct: 1871 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 1812 Query: 302 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 361 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 1811 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 1752 Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctcgtactgcccagtggctgcg 421 ||||| || || |||||||| || ||||||||||| |||||||||| || || || || Sbjct: 1751 acctttgttggatcgatgattcctgcagccatcaa-tcctcgtacttgccggttgcagca 1693 Query: 422 ttgtagccgaacttgaagttgtcgttagaaagaaccttctcggtaacaacactgccattg 481 ||||| ||||| || | ||| ||||| ||||| ||||||||| |||| ||||| ||||| Sbjct: 1692 ttgtaaccgaatttcacgttatcgttggaaagcaccttctcgctaactacacttccatta 1633 Query: 482 acaccagcattcttggcgat 501 |||||||||||||||||||| Sbjct: 1632 acaccagcattcttggcgat 1613 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttcctc 645 |||||||| || ||||||||||||||||||||||| Sbjct: 1503 agagtgcaaccaccaccaacaacaataccttcctc 1469
>dbj|AK101537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048E22, full insert sequence Length = 2154 Score = 127 bits (64), Expect = 5e-26 Identities = 258/323 (79%) Strand = Plus / Minus Query: 326 gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 385 ||||||||||| |||||||||| |||||||||||||||||| ||||| || || |||||| Sbjct: 1788 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1729 Query: 386 gcagccatcaagtcctcgtactgcccagtggctgcgttgtagccgaacttgaagttgtcg 445 ||||||||||| ||||| || | || || || || ||||| || || ||||||| || Sbjct: 1728 gcagccatcaaatcctcatattttcctgtagcggcattgtaaccatacctgaagttatca 1669 Query: 446 ttagaaagaaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaac 505 || | ||| |||||||| |||||||||||||| || ||||||||||| || || || || Sbjct: 1668 ttggcaaggaccttctcagtaacaacactgccgttaacaccagcattttttgctattaat 1609 Query: 506 ttgagtgggtagcacagcgccctcctcactatctcagctccgaccttctgctcgncgttc 565 || |||||||| | || | | |||| || || ||||| || |||||||| || | ||| Sbjct: 1608 ttaagtgggtaactcaaggacttccttacgatttcagccccaaccttctgttcatcattc 1549 Query: 566 tccagggtgtccttgatggcatcaaccttagcagccagcctcaaaagagtgcaccctcca 625 || || || || | ||||||||||| || | || |||| |||||| || || || || Sbjct: 1548 tcaagtgtttctataatggcatcaacttttgatgcaagccgcaaaagcgtacagccacct 1489 Query: 626 ccaacaacaataccttcctcaac 648 ||||||||||||||||||||||| Sbjct: 1488 ccaacaacaataccttcctcaac 1466
>dbj|AK070603.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059D06, full insert sequence Length = 2310 Score = 127 bits (64), Expect = 5e-26 Identities = 258/323 (79%) Strand = Plus / Minus Query: 326 gccaccgacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgatacca 385 ||||||||||| |||||||||| |||||||||||||||||| ||||| || || |||||| Sbjct: 1809 gccaccgacgcagcatgctccaagcaacatctcaccaccttggtgggatcaataatacca 1750 Query: 386 gcagccatcaagtcctcgtactgcccagtggctgcgttgtagccgaacttgaagttgtcg 445 ||||||||||| ||||| || | || || || || ||||| || || ||||||| || Sbjct: 1749 gcagccatcaaatcctcatattttcctgtagcggcattgtaaccatacctgaagttatca 1690 Query: 446 ttagaaagaaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaac 505 || | ||| |||||||| |||||||||||||| || ||||||||||| || || || || Sbjct: 1689 ttggcaaggaccttctcagtaacaacactgccgttaacaccagcattttttgctattaat 1630 Query: 506 ttgagtgggtagcacagcgccctcctcactatctcagctccgaccttctgctcgncgttc 565 || |||||||| | || | | |||| || || ||||| || |||||||| || | ||| Sbjct: 1629 ttaagtgggtaactcaaggacttccttacgatttcagccccaaccttctgttcatcattc 1570 Query: 566 tccagggtgtccttgatggcatcaaccttagcagccagcctcaaaagagtgcaccctcca 625 || || || || | ||||||||||| || | || |||| |||||| || || || || Sbjct: 1569 tcaagtgtttctataatggcatcaacttttgatgcaagccgcaaaagcgtacagccacct 1510 Query: 626 ccaacaacaataccttcctcaac 648 ||||||||||||||||||||||| Sbjct: 1509 ccaacaacaataccttcctcaac 1487
>gb|M35600.1|BNA60CPNB B.napus plastid 60-kDa chaperonin-60 beta-polypeptide (cpn-60 beta) mRNA, partial cds Length = 1982 Score = 127 bits (64), Expect = 5e-26 Identities = 190/232 (81%) Strand = Plus / Minus Query: 272 ggctcaggctccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccacc 331 |||||||||||||||||||| || ||||| ||| ||| ||| ||| ||||| || ||| Sbjct: 1820 ggctcaggctccttgatctcaacaaccacacagtcagacatcaagaatgtctttgcaacc 1761 Query: 332 gacgcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagcc 391 || || ||||| |||| |||||||||||| |||||||| || |||||||| || |||||| Sbjct: 1760 gaagctgcatgttccaagcaacatctcacaaccttagttggatcgatgattcctgcagcc 1701 Query: 392 atcaagtcctcgtactgcccagtggctgcgttgtagccgaacttgaagttgtcgttagaa 451 || | |||||||||| || || || || ||||| |||||||| | || ||||||||| Sbjct: 1700 attagatcctcgtacttgccggttgcagcattgtaaccgaacttcacattatcgttagaa 1641 Query: 452 agaaccttctcggtaacaacactgccattgacaccagcattcttggcgatca 503 || ||||||||| |||| || || |||||||| || ||||||||||| |||| Sbjct: 1640 agcaccttctcgctaactacgcttccattgactcctgcattcttggcaatca 1589
>ref|NM_125033.3| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.1 mRNA, complete cds Length = 2315 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 447 tagaaagaaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaact 506 |||||||||||||||| | ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 1661 tagaaagaaccttctcactgacaacgctgccattgacaccagcgttcttggcgattaact 1602 Query: 507 tgagtgggtagc 518 | |||||||||| Sbjct: 1601 tcagtgggtagc 1590 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 338 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 393 |||||||| |||||||||||||| || || || || || ||||| || |||||||| Sbjct: 1770 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 1715 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttc 642 ||||| || ||||| ||||||||||||||||| Sbjct: 1497 agagtacatcctccgccaacaacaataccttc 1466
>ref|NM_001037006.1| Arabidopsis thaliana ATP binding / protein binding AT5G56500 transcript variant AT5G56500.2 mRNA, complete cds Length = 2355 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 447 tagaaagaaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaact 506 |||||||||||||||| | ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 1701 tagaaagaaccttctcactgacaacgctgccattgacaccagcgttcttggcgattaact 1642 Query: 507 tgagtgggtagc 518 | |||||||||| Sbjct: 1641 tcagtgggtagc 1630 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 338 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 393 |||||||| |||||||||||||| || || || || || ||||| || |||||||| Sbjct: 1810 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 1755 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttc 642 ||||| || ||||| ||||||||||||||||| Sbjct: 1537 agagtacatcctccgccaacaacaataccttc 1506
>dbj|AK220921.1| Arabidopsis thaliana mRNA for RuBisCO subunit binding-protein beta subunit precursor, partial cds, clone: RAFL22-49-H21 Length = 766 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 447 tagaaagaaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaact 506 |||||||||||||||| | ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 299 tagaaagaaccttctcactgacaacgctgccattgacaccagcgttcttggcgattaact 240 Query: 507 tgagtgggtagc 518 | |||||||||| Sbjct: 239 tcagtgggtagc 228 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 338 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 393 |||||||| |||||||||||||| || || || || || ||||| || |||||||| Sbjct: 408 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 353 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttc 642 ||||| || ||||| ||||||||||||||||| Sbjct: 135 agagtacatcctccgccaacaacaataccttc 104
>emb|BX832336.1|CNS09ZVE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 916 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 447 tagaaagaaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaact 506 |||||||||||||||| | ||||| ||||||||||||||||| ||||||||||| |||| Sbjct: 522 tagaaagaaccttctcactgacaacgctgccattgacaccagcgttcttggcgattaact 463 Query: 507 tgagtgggtagc 518 | |||||||||| Sbjct: 462 tcagtgggtagc 451 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 338 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 393 |||||||| |||||||||||||| || || || || || ||||| || |||||||| Sbjct: 631 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 576 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttc 642 ||||| || ||||| ||||||||||||||||| Sbjct: 358 agagtacatcctccgccaacaacaataccttc 327
>ref|NM_112193.1| Arabidopsis thaliana ATP binding / protein binding AT3G13470 mRNA, complete cds Length = 1922 Score = 85.7 bits (43), Expect = 2e-13 Identities = 246/314 (78%) Strand = Plus / Minus Query: 335 gcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatc 394 |||||||| || | |||||||||||| ||||| || ||||||||||| || ||||||||| Sbjct: 1682 gcggcatgttctaagcaacatctcacaacctttgtcgggtcgatgatgcctgcagccatc 1623 Query: 395 aagtcctcgtactgcccagtggctgcgttgtagccgaacttgaagttgtcgttagaaaga 454 | ||| || |||| || || || || ||||| || || || | || ||||||| || Sbjct: 1622 aggtcttcatacttgccggttgcagcattgtatccaaatttcacattatcgttagccagc 1563 Query: 455 accttctcggtaacaacactgccattgacaccagcattcttggcgatcaacttgagtggg 514 ||||||||| | |||||||| ||||| |||||||||||||| || ||||| || || ||| Sbjct: 1562 accttctcgctgacaacacttccattaacaccagcattcttagctatcaatttcagaggg 1503 Query: 515 tagcacagcgccctcctcactatctcagctccgaccttctgctcgncgttctccagggtg 574 || | ||| || || | || || || ||||| ||||| | || | || || ||||| Sbjct: 1502 taactcagtgctcttttaacaatttccgctccaaccttttcttcatcattttcaagggta 1443 Query: 575 tccttgatggcatcaaccttagcagccagcctcaaaagagtgcaccctccaccaacaaca 634 |||||||||||||| ||||| | || |||| | |||||||| || |||||||| ||| Sbjct: 1442 tccttgatggcatcgacctttgatgcaagccggagcagagtgcaaccaccaccaacgaca 1383 Query: 635 ataccttcctcaac 648 |||||||||||||| Sbjct: 1382 ataccttcctcaac 1369
>emb|BX831822.1|CNS09YNB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1462 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 448 agaaagaaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaactt 507 ||||||||||||||| | ||||| |||||||| |||||||| ||||||||||| ||||| Sbjct: 1054 agaaagaaccttctcactgacaacgctgccatttacaccagcgttcttggcgattaactt 995 Query: 508 gagtgggtagc 518 |||||||||| Sbjct: 994 cagtgggtagc 984 Score = 40.1 bits (20), Expect = 8.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 338 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 393 |||||||| |||||||||||||| || || || || || ||||| || |||||||| Sbjct: 1164 gcatgctctaggcaacatctcacaactttggttggatcaatgattcctgcagccat 1109 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttc 642 ||||| || ||||| ||||||||||||||||| Sbjct: 891 agagtacatcctccgccaacaacaataccttc 860
>dbj|AK118623.2| Arabidopsis thaliana At3g13470 mRNA for putative chaperonin 60 beta, complete cds, clone: RAFL19-88-M03 Length = 471 Score = 75.8 bits (38), Expect = 2e-10 Identities = 137/170 (80%) Strand = Plus / Minus Query: 335 gcggcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatc 394 |||||||| || | |||||||||||| ||||| || ||||||||||| || ||||||||| Sbjct: 185 gcggcatgttctaagcaacatctcacaacctttgtcgggtcgatgatgcctgcagccatc 126 Query: 395 aagtcctcgtactgcccagtggctgcgttgtagccgaacttgaagttgtcgttagaaaga 454 | ||| || |||| || || || || ||||| || || || | || ||||||| || Sbjct: 125 aggtcttcatacttgccggttgcagcattgtatccaaatttcacattatcgttagccagc 66 Query: 455 accttctcggtaacaacactgccattgacaccagcattcttggcgatcaa 504 ||||||||| | |||||||| ||||| |||||||||||||| || ||||| Sbjct: 65 accttctcgctgacaacacttccattaacaccagcattcttagctatcaa 16
>dbj|AB019234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKN22 Length = 27229 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 467 acaacactgccattgacaccagcattcttggcgatcaacttgagtgggtagc 518 ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 1913 acaacgctgccattgacaccagcgttcttggcgattaacttcagtgggtagc 1862 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 338 gcatgctccaggcaacatctcaccacctt 366 |||||||| |||||||||||||| ||||| Sbjct: 2197 gcatgctctaggcaacatctcacaacctt 2169 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttc 642 ||||| || ||||| ||||||||||||||||| Sbjct: 1669 agagtacatcctccgccaacaacaataccttc 1638
>gb|DQ226886.1| Boechera divaricarpa isolate SLW-C-H11 mRNA sequence Length = 331 Score = 69.9 bits (35), Expect = 1e-08 Identities = 131/163 (80%) Strand = Plus / Minus Query: 242 gagttgtccatggggttgacgaggggcgcgggctcaggctccttgatctcgacgaccacc 301 ||||||||||| |||||| ||| ||| || || ||||| ||||||||||| || || || Sbjct: 163 gagttgtccattgggttgccgacgggggctggttcaggttccttgatctcaacaacaaca 104 Query: 302 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 361 ||||||| ||| ||| ||||| || || || || || || |||| |||||||||||| Sbjct: 103 cagtccgacatcaagaacgtctttgcaactgaagctgcgtgttccaagcaacatctcaca 44 Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctcgt 404 ||||| || || |||||||| || |||||||| || ||||||| Sbjct: 43 acctttgttggatcgatgattcctgcagccattaaatcctcgt 1
>gb|L27473.1|CRECPN1C Chlamydomonas reinhardtii chaperonin beta-like subunit, partial cds Length = 1618 Score = 67.9 bits (34), Expect = 4e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 286 gatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctc 345 ||||||| |||||||||||| | | |||||||||||||||||||||| |||| | ||| Sbjct: 729 gatctcggtgaccaccacgtcagccagcaggaaggtcttggccaccgacacggcgttctc 670 Query: 346 caggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaagtcctcg 403 ||| | || | |||||||| |||||||||||||| || || |||||| ||||||| Sbjct: 669 cagcgagcagcggaccaccttggtggggtcgatgatgccggcctccatcaggtcctcg 612
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 326 gccaccgacgcggcatgctccaggcaacatctcaccacct 365 ||||||||||| |||||||||| ||||||||||||||||| Sbjct: 163146 gccaccgacgcagcatgctccaagcaacatctcaccacct 163107 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 454 aaccttctcggtaacaacactgccattgacaccagcatt 492 ||||||||| |||||||||||||| || ||||||||||| Sbjct: 162650 aaccttctcagtaacaacactgccgttaacaccagcatt 162612 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 581 atggcatcaaccttagcagccagcctcaaaagagtgcaccctccaccaacaacaatacct 640 ||||||||||| || | || |||| |||||| || || || || ||||||||||||||| Sbjct: 162418 atggcatcaacttttgatgcaagccgcaaaagcgtacagccacctccaacaacaatacct 162359 Query: 641 tcctcaac 648 |||||||| Sbjct: 162358 tcctcaac 162351 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctc 402 ||||| ||||| || || ||||||||||||||||| ||||| Sbjct: 162831 accttggtgggatcaataataccagcagccatcaaatcctc 162791
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 326 gccaccgacgcggcatgctccaggcaacatctcaccacct 365 ||||||||||| |||||||||| ||||||||||||||||| Sbjct: 112173 gccaccgacgcagcatgctccaagcaacatctcaccacct 112134 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 454 aaccttctcggtaacaacactgccattgacaccagcatt 492 ||||||||| |||||||||||||| || ||||||||||| Sbjct: 111677 aaccttctcagtaacaacactgccgttaacaccagcatt 111639 Score = 48.1 bits (24), Expect = 0.037 Identities = 57/68 (83%) Strand = Plus / Minus Query: 581 atggcatcaaccttagcagccagcctcaaaagagtgcaccctccaccaacaacaatacct 640 ||||||||||| || | || |||| |||||| || || || || ||||||||||||||| Sbjct: 111445 atggcatcaacttttgatgcaagccgcaaaagcgtacagccacctccaacaacaatacct 111386 Query: 641 tcctcaac 648 |||||||| Sbjct: 111385 tcctcaac 111378 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 362 accttagtggggtcgatgataccagcagccatcaagtcctc 402 ||||| ||||| || || ||||||||||||||||| ||||| Sbjct: 111858 accttggtgggatcaataataccagcagccatcaaatcctc 111818
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 455 accttctcggtaacaacactgccattgacaccagcattcttggcgat 501 ||||||||| |||| ||||| ||||| |||||||||||||||||||| Sbjct: 54712 accttctcgctaactacacttccattaacaccagcattcttggcgat 54666 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 611 agagtgcaccctccaccaacaacaataccttcctc 645 |||||||| || ||||||||||||||||||||||| Sbjct: 54482 agagtgcaaccaccaccaacaacaataccttcctc 54448 Score = 48.1 bits (24), Expect = 0.037 Identities = 99/124 (79%) Strand = Plus / Minus Query: 242 gagttgtccatggggttgacgaggggcgcgggctcaggctccttgatctcgacgaccacc 301 ||||||||||| |||||| ||| ||| | || ||||| ||||||||||| || || || Sbjct: 55104 gagttgtccattgggttgccgacgggaactggttcaggttccttgatctcaacaacaacg 55045 Query: 302 acgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaacatctcacc 361 ||||||| ||| ||| ||||| || ||||| || || || |||| |||||||||||| Sbjct: 55044 cagtccgacatcaagaaagtctttgcaaccgaagctgcgtgttccaagcaacatctcaca 54985 Query: 362 acct 365 |||| Sbjct: 54984 acct 54981 Score = 44.1 bits (22), Expect = 0.57 Identities = 31/34 (91%) Strand = Plus / Minus Query: 374 tcgatgataccagcagccatcaagtcctcgtact 407 |||||||| || ||||||||||| |||||||||| Sbjct: 54880 tcgatgattcctgcagccatcaaatcctcgtact 54847
>gb|U46136.1|STU46136 Solanum tuberosum chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2078 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 614 gtgcaccctccaccaacaacaataccttcctcaac 648 ||||||||||| ||||||||||||||||||||||| Sbjct: 1449 gtgcaccctcctccaacaacaataccttcctcaac 1415 Score = 44.1 bits (22), Expect = 0.57 Identities = 97/122 (79%) Strand = Plus / Minus Query: 278 ggctccttgatctcgacgaccaccacgtccgacgtcaggaaggtcttggccaccgacgcg 337 |||||||||||||| || ||||| || ||| ||| ||| ||||| ||||| || || Sbjct: 1785 ggctccttgatctcaaccaccacgcaatctgacatcaagaatgtcttagccacagatgca 1726 Query: 338 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccatcaag 397 || || || || ||||| ||||||||||| || || || ||||| ||||||||||| ||| Sbjct: 1725 gcgtgttctagacaacacctcaccacctttgttggatcaatgatgccagcagccattaag 1666 Query: 398 tc 399 || Sbjct: 1665 tc 1664
>gb|L27471.1|CRECPN1A Chlamydomonas reinhardtii chaperonin beta-like subunit, complete cds Length = 1970 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 295 gaccaccacgtccgacgtcaggaaggtcttggccaccgacgcggcatgctccaggcaaca 354 |||||||||||||| | |||||||||||||||||||||| |||| | ||||| | | || Sbjct: 1227 gaccaccacgtccgccagcaggaaggtcttggccaccgacacggcgttctccatggagca 1168 Query: 355 tctcaccaccttagtggggtcgatgat 381 | |||||||| | |||||||||||| Sbjct: 1167 gcggaccaccttggaggggtcgatgat 1141
>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15 Length = 83287 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 569 agggtgtccttgatggcatcaaccttagcagccagcctcaaaagagtgcaccctccacca 628 ||||| |||||||||||||| ||||| | || |||| | |||||||| || |||||| Sbjct: 45857 agggtatccttgatggcatcgacctttgatgcaagccggagcagagtgcaaccaccacca 45798 Query: 629 acaacaataccttcctcaac 648 || ||||||||||||||||| Sbjct: 45797 acgacaataccttcctcaac 45778 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 454 aaccttctcggtaacaacactgccattgacaccagcattcttggcgatcaa 504 |||||||||| | |||||||| ||||| |||||||||||||| || ||||| Sbjct: 46053 aaccttctcgctgacaacacttccattaacaccagcattcttagctatcaa 46003
>dbj|AB158542.1| Ipomoea nil cpn60 beta mRNA for 60 kDa chaperonin beta subunit-like protein, partial cds Length = 437 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 350 caacatctcaccaccttagtggggtcgatgataccagcagccatcaagtc 399 ||||||||||||||||| || || || || || ||||||||||||||||| Sbjct: 50 caacatctcaccaccttggttggatcaataattccagcagccatcaagtc 1
>gb|BT013332.1| Lycopersicon esculentum clone 135060F, mRNA sequence Length = 2189 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 467 acaacactgccattgacaccagcattcttggcgatcaactt 507 |||||||| ||||| ||||||||||||||||| || ||||| Sbjct: 1625 acaacacttccattaacaccagcattcttggctattaactt 1585 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 338 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 393 |||||||||| ||||||||| ||||| || || || || || |||||||||||||| Sbjct: 1754 gcatgctccaagcaacatcttaccacttttgtaggatcaattataccagcagccat 1699
>gb|U21139.1|PSU21139 Pisum sativum chaperonin precursor mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2162 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 338 gcatgctccaggcaacatctcaccaccttagtggggtcgatgataccagcagccat 393 ||||| |||||||||||||| |||||||| || || || ||||| || |||||||| Sbjct: 1794 gcatgttccaggcaacatctgaccacctttgttggatcaatgatccctgcagccat 1739 Score = 48.1 bits (24), Expect = 0.037 Identities = 39/44 (88%) Strand = Plus / Minus Query: 452 agaaccttctcggtaacaacactgccattgacaccagcattctt 495 ||||||||||| | |||||||| ||||| |||||||||||||| Sbjct: 1680 agaaccttctcactcacaacactaccattaacaccagcattctt 1637
>dbj|AK108892.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-E06, full insert sequence Length = 2254 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Minus Query: 488 gcattcttggcgatcaacttgagtgggtagcacagcgccctcctcactatctcagctccg 547 ||||||| ||||||| ||| ||||||||| ||||||| || |||| || || || ||| Sbjct: 1556 gcattctctgcgatcagcttcagtgggtaggtcagcgccttcttcacaatttcggcaccg 1497 Query: 548 accttctgctc 558 ||||||||||| Sbjct: 1496 accttctgctc 1486
>gb|AF233387.1| Rhodococcus equi GroEL (groEL) gene, complete cds; and unknown genes Length = 4713 Score = 44.1 bits (22), Expect = 0.57 Identities = 46/54 (85%) Strand = Plus / Minus Query: 371 gggtcgatgataccagcagccatcaagtcctcgtactgcccagtggctgcgttg 424 |||||| |||| |||||||||| || ||||||||||| || ||||| |||||| Sbjct: 4311 gggtcgttgatgccagcagccagcaggtcctcgtactcaccggtggcggcgttg 4258
>ref|XM_975351.1| PREDICTED: Mus musculus similar to odd Oz/ten-m homolog 2 (LOC669490), mRNA Length = 7697 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 ggagttgtccatggggttgacg 262 |||||||||||||||||||||| Sbjct: 2277 ggagttgtccatggggttgacg 2256
>ref|XM_546253.2| PREDICTED: Canis familiaris similar to odd Oz/ten-m homolog 2 (LOC489135), mRNA Length = 8210 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 ggagttgtccatggggttgacg 262 |||||||||||||||||||||| Sbjct: 3873 ggagttgtccatggggttgacg 3852
>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human KIBRA, a pseudogene similar to part of actin, the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG islands, complete sequence Length = 186736 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 ggagttgtccatggggttgacg 262 |||||||||||||||||||||| Sbjct: 113689 ggagttgtccatggggttgacg 113710
>emb|AL606512.8| Mouse DNA sequence from clone RP23-155D19 on chromosome 11, complete sequence Length = 157494 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 69 taaatgtttctctgcttatttc 90 |||||||||||||||||||||| Sbjct: 138017 taaatgtttctctgcttatttc 138038
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 362 accttagtggggtcgatgataccagc 387 |||||||| ||||||||||||||||| Sbjct: 381194 accttagttgggtcgatgataccagc 381169
>ref|NM_011856.2| Mus musculus odd Oz/ten-m homolog 2 (Drosophila) (Odz2), mRNA Length = 8797 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 ggagttgtccatggggttgacg 262 |||||||||||||||||||||| Sbjct: 4366 ggagttgtccatggggttgacg 4345
>dbj|AB025411.1| Mus musculus mRNA for Ten-m2, complete cds Length = 8797 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 241 ggagttgtccatggggttgacg 262 |||||||||||||||||||||| Sbjct: 4366 ggagttgtccatggggttgacg 4345
>ref|XM_614930.2| PREDICTED: Bos taurus similar to odd Oz/ten-m homolog 2 (LOC541183), mRNA Length = 4770 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ggagttgtccatggggttgac 261 ||||||||||||||||||||| Sbjct: 1563 ggagttgtccatggggttgac 1543
>gb|AE006276.1| Lactococcus lactis subsp. lactis IL1403 section 38 of 218 of the complete genome Length = 12560 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 631 aacaataccttcctcaacggc 651 ||||||||||||||||||||| Sbjct: 5094 aacaataccttcctcaacggc 5074
>emb|AL592423.8| Human DNA sequence from clone RP11-1A24 on chromosome 6 Contains part of the GRM1 gene for metabotropic glutamate receptor 1 and a novel pseudogene, complete sequence Length = 53728 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 tgcatttttcttatctcaaaa 135 ||||||||||||||||||||| Sbjct: 4551 tgcatttttcttatctcaaaa 4531
>emb|X71132.1|LLGROESEL L.lactis groES and groEL genes Length = 2267 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 631 aacaataccttcctcaacggc 651 ||||||||||||||||||||| Sbjct: 1847 aacaataccttcctcaacggc 1827
>dbj|AB236859.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C766 Length = 1971 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 620 cctccaccaacaacaataccttcctcaacggca 652 ||||||||| ||||||||||||||||| |||| Sbjct: 1411 cctccaccaggaacaataccttcctcaatggca 1379
>dbj|AB236852.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: C618 Length = 1443 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 620 cctccaccaacaacaataccttcctcaacggca 652 ||||||||| ||||||||||||||||| |||| Sbjct: 1006 cctccaccaggaacaataccttcctcaatggca 974
>dbj|AB236850.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C580 Length = 1986 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 620 cctccaccaacaacaataccttcctcaacggca 652 ||||||||| ||||||||||||||||| |||| Sbjct: 1433 cctccaccaggaacaataccttcctcaatggca 1401
>dbj|AB236844.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C447 Length = 1999 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 620 cctccaccaacaacaataccttcctcaacggca 652 ||||||||| ||||||||||||||||| |||| Sbjct: 1429 cctccaccaggaacaataccttcctcaatggca 1397
>dbj|AB236783.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C1772 Length = 2038 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 620 cctccaccaacaacaataccttcctcaacggca 652 ||||||||| ||||||||||||||||| |||| Sbjct: 1421 cctccaccaggaacaataccttcctcaatggca 1389
>dbj|AB236779.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, complete cds, clone: C1724 Length = 1982 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 620 cctccaccaacaacaataccttcctcaacggca 652 ||||||||| ||||||||||||||||| |||| Sbjct: 1413 cctccaccaggaacaataccttcctcaatggca 1381
>dbj|AB236775.1| Trifolium pratense RNA for putative rubisco subunit binding-protein alpha subunit, partial cds, clone: C1598 Length = 2018 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 620 cctccaccaacaacaataccttcctcaacggca 652 ||||||||| ||||||||||||||||| |||| Sbjct: 1357 cctccaccaggaacaataccttcctcaatggca 1325
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence Length = 216566 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ccacatcctctggagagactccac 216 |||| ||||||||||||||||||| Sbjct: 70428 ccacttcctctggagagactccac 70405
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 tccttgatggcatcaacctt 594 |||||||||||||||||||| Sbjct: 938152 tccttgatggcatcaacctt 938133
>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome Length = 2572079 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 623 ccaccaacaacaataccttc 642 |||||||||||||||||||| Sbjct: 1773687 ccaccaacaacaataccttc 1773668
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tctcgacgaccaccacgtcc 307 |||||||||||||||||||| Sbjct: 36065 tctcgacgaccaccacgtcc 36084
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tctcgacgaccaccacgtcc 307 |||||||||||||||||||| Sbjct: 839910 tctcgacgaccaccacgtcc 839929
>gb|AC129219.3| Mus musculus BAC clone RP24-474C15 from chromosome 14, complete sequence Length = 195935 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 193 ccacatcctctggagagactccac 216 |||| ||||||||||||||||||| Sbjct: 148108 ccacttcctctggagagactccac 148085
>emb|AM085495.1| Helicoverpa zea mRNA for carboxypeptidase B (cpb gene) Length = 1361 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 624 caccaacaacaataccttcc 643 |||||||||||||||||||| Sbjct: 1282 caccaacaacaataccttcc 1263
>gb|AC116470.12| Mus musculus chromosome 16, clone RP23-383N18, complete sequence Length = 194593 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 ctctcaaaacttggttcatg 177 |||||||||||||||||||| Sbjct: 46054 ctctcaaaacttggttcatg 46073
>gb|AC129595.3| Mus musculus BAC clone RP23-257H19 from chromosome 7, complete sequence Length = 214318 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 165 aacttggttcatgctaccaaaaat 188 |||||||||||||||| ||||||| Sbjct: 67422 aacttggttcatgctatcaaaaat 67399
>ref|XM_809994.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503893.50) partial mRNA Length = 1215 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 aaagagtgcaccctccacca 628 |||||||||||||||||||| Sbjct: 159 aaagagtgcaccctccacca 140
>ref|XM_546476.2| PREDICTED: Canis familiaris similar to RIKEN cDNA E130107N23 (LOC489358), mRNA Length = 1576 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 tcggtaacaacactgccatt 480 |||||||||||||||||||| Sbjct: 1031 tcggtaacaacactgccatt 1012
>gb|AC164642.3| Mus musculus BAC clone RP23-248L4 from chromosome 6, complete sequence Length = 212166 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 agcctcaaaagagtgcaccc 621 |||||||||||||||||||| Sbjct: 178919 agcctcaaaagagtgcaccc 178900
>gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome 6, complete sequence Length = 212096 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 agcctcaaaagagtgcaccc 621 |||||||||||||||||||| Sbjct: 183735 agcctcaaaagagtgcaccc 183754
>emb|AL049867.2|HSJ738I16 Human DNA sequence from clone RP4-738I16 on chromosome 20p11.22-12.2 Contains STSs and GSSs, complete sequence Length = 96444 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 tagcagccagcctcaaaaga 613 |||||||||||||||||||| Sbjct: 47921 tagcagccagcctcaaaaga 47902
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tctcgacgaccaccacgtcc 307 |||||||||||||||||||| Sbjct: 682326 tctcgacgaccaccacgtcc 682345
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 caccaccttagtggggtcgatgat 381 ||||||||| |||||||||||||| Sbjct: 3516159 caccaccttggtggggtcgatgat 3516136
>gb|AC115621.3| Homo sapiens BAC clone RP11-315D13 from 4, complete sequence Length = 148726 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 tttttcttatctcaaaacta 138 |||||||||||||||||||| Sbjct: 110055 tttttcttatctcaaaacta 110036
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 ccagcctcaaaagagtgcac 619 |||||||||||||||||||| Sbjct: 1902020 ccagcctcaaaagagtgcac 1902039
>gb|U21105.1|PSU21105 Pisum sativum alphacpn60 precursor (alphacpn60) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1977 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 620 cctccaccaacaacaataccttcctcaa 647 ||||||||| ||||||||||||||||| Sbjct: 1412 cctccaccaggaacaataccttcctcaa 1385
>gb|AF079317.1| Sphingomonas aromaticivorans plasmid pNL1, complete plasmid sequence Length = 184457 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 280 ctccttgatctcgacgaccaccac 303 ||||||||||||| |||||||||| Sbjct: 73942 ctccttgatctcgccgaccaccac 73965
>gb|AF065610.1|AF065610 Toxoplasma gondii strain 76K heat shock protein 60 pseudogene, mRNA sequence Length = 2442 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 368 gtggggtcgatgataccagcagccatca 395 |||||||||||||| || |||||||||| Sbjct: 1633 gtggggtcgatgatgccggcagccatca 1606
>gb|AF065609.1|AF065609 Toxoplasma gondii strain 76K heat shock protein 60 mRNA, complete cds Length = 2430 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 368 gtggggtcgatgataccagcagccatca 395 |||||||||||||| || |||||||||| Sbjct: 1621 gtggggtcgatgatgccggcagccatca 1594
>gb|AC007630.4|AC007630 Homo sapiens chromosome 20 clone P1-7739, complete sequence Length = 169494 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 tagcagccagcctcaaaaga 613 |||||||||||||||||||| Sbjct: 66185 tagcagccagcctcaaaaga 66166
>gb|AC141643.4| Mus musculus BAC clone RP23-198F6 from chromosome 7, complete sequence Length = 237233 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 cgtcaggaaggtcttggcca 329 |||||||||||||||||||| Sbjct: 177375 cgtcaggaaggtcttggcca 177394
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tctcgacgaccaccacgtcc 307 |||||||||||||||||||| Sbjct: 590826 tctcgacgaccaccacgtcc 590845
>emb|BX000537.11| Mouse DNA sequence from clone RP24-392J24 on chromosome X, complete sequence Length = 162188 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ttaaaccacatcctctggag 207 |||||||||||||||||||| Sbjct: 5328 ttaaaccacatcctctggag 5347
>emb|AL163973.1|CNS05TBS Human chromosome 14 DNA sequence BAC C-2213F21 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 116503 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 108 atcacattgcatttttcttatctc 131 ||||||||||||||| |||||||| Sbjct: 72480 atcacattgcattttacttatctc 72503 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,056,388 Number of Sequences: 3902068 Number of extensions: 5056388 Number of successful extensions: 94340 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 88 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93883 Number of HSP's gapped (non-prelim): 440 length of query: 652 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 629 effective length of database: 17,143,297,704 effective search space: 10783134255816 effective search space used: 10783134255816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
