ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd27p11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470454.1| Oryza sativa (japonica cultivar-group), mRNA 147 6e-32
2dbj|AK072499.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 6e-32
3dbj|AK060748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 6e-32
4gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome... 82 3e-12
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 82 3e-12
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
7dbj|AB089269.1| Triticum aestivum D31 mRNA for fructan exohydrol... 52 0.003
8ref|XM_470455.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.043
9gb|AC147990.3| Mus musculus BAC clone RP24-396B13 from chromosom... 44 0.67
10gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, comple... 44 0.67
11emb|BX248586.1| Blochmannia floridanus complete genome; segment 3/3 44 0.67
12gb|AC107752.8| Mus musculus chromosome 10, clone RP23-244J13, co... 42 2.7
13gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 2.7
14gb|AC127303.3| Mus musculus BAC clone RP23-280E20 from chromosom... 42 2.7
15gb|AC100708.10| Mus musculus chromosome 10, clone RP23-169I18, c... 42 2.7
16gb|AC114407.24| Mus musculus chromosome 10, clone RP23-51G1, com... 42 2.7
17gb|AC108724.4| Homo sapiens 3 BAC RP11-413E6 (Roswell Park Cance... 42 2.7
18gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, comp... 42 2.7
19emb|AL590616.23| Mouse DNA sequence from clone RP23-231P12 on ch... 42 2.7
20gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome... 42 2.7
21gb|AC158998.2| Mus musculus BAC clone RP24-290P19 from chromosom... 42 2.7
22gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosom... 42 2.7
23emb|AL672245.6| Mouse DNA sequence from clone RP23-43K8 on chrom... 42 2.7
24emb|AL592170.21| Human DNA sequence from clone RP11-298A19 on ch... 42 2.7
25gb|AY109834.1| Zea mays CL7866_1 mRNA sequence 42 2.7
26emb|BX072557.8| Mouse DNA sequence from clone RP23-79L4 on chrom... 42 2.7
27emb|AL929532.12| Mouse DNA sequence from clone RP23-138C21 on ch... 42 2.7
28emb|AL683827.6| Mouse DNA sequence from clone RP23-473F3 on chro... 42 2.7 
>ref|XM_470454.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2474

 Score =  147 bits (74), Expect = 6e-32
 Identities = 179/214 (83%)
 Strand = Plus / Minus

                                                                        
Query: 374  ctcactactgtagaaaccagcagcttgtcaccgacaatctgtcttagccgtctcacaaaa 433
            |||||||||||||||||||  ||||||||||| ||||||||||| ||| |  |||| |  
Sbjct: 2099 ctcactactgtagaaaccaaaagcttgtcaccaacaatctgtctcagctgcttcactagg 2040

                                                                        
Query: 434  tcgggcctgcttatctttctcctcttgaattcttcatagtgtccatggattatgtccatg 493
            || ||||||||||||||||||||||||||||||||||| | |  ||| |  |  ||||||
Sbjct: 2039 tcaggcctgcttatctttctcctcttgaattcttcataatatttatgcaccagatccatg 1980

                                                                        
Query: 494  tcagaacgaggaacttttgtggagatggcagcaaaaagcattgggaggggcatccagggt 553
            || ||||| || ||||| | ||| || ||||||||||||||||  | ||||||||| |||
Sbjct: 1979 tccgaacggggtactttagcggaaatagcagcaaaaagcattgaaaagggcatccaaggt 1920

                                              
Query: 554  gaagtaggaggccttcgagttggagcacgcccaa 587
            ||| |||||| |||| || |||||||||||||||
Sbjct: 1919 gaactaggagaccttggacttggagcacgcccaa 1886



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 664  accagaatttcgtatctcagatacgttggatgcagtatct 703
            ||||||||||| ||||||||| |  |||||||||||||||
Sbjct: 1809 accagaatttcttatctcagagatattggatgcagtatct 1770



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 739  ctttgataagaacagcatattcagcata 766
            ||||||||| ||||||||||||||||||
Sbjct: 1750 ctttgataataacagcatattcagcata 1723
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>dbj|AK072499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E22, full
            insert sequence
          Length = 3913

 Score =  147 bits (74), Expect = 6e-32
 Identities = 179/214 (83%)
 Strand = Plus / Minus

                                                                        
Query: 374  ctcactactgtagaaaccagcagcttgtcaccgacaatctgtcttagccgtctcacaaaa 433
            |||||||||||||||||||  ||||||||||| ||||||||||| ||| |  |||| |  
Sbjct: 3557 ctcactactgtagaaaccaaaagcttgtcaccaacaatctgtctcagctgcttcactagg 3498

                                                                        
Query: 434  tcgggcctgcttatctttctcctcttgaattcttcatagtgtccatggattatgtccatg 493
            || ||||||||||||||||||||||||||||||||||| | |  ||| |  |  ||||||
Sbjct: 3497 tcaggcctgcttatctttctcctcttgaattcttcataatatttatgcaccagatccatg 3438

                                                                        
Query: 494  tcagaacgaggaacttttgtggagatggcagcaaaaagcattgggaggggcatccagggt 553
            || ||||| || ||||| | ||| || ||||||||||||||||  | ||||||||| |||
Sbjct: 3437 tccgaacggggtactttagcggaaatagcagcaaaaagcattgaaaagggcatccaaggt 3378

                                              
Query: 554  gaagtaggaggccttcgagttggagcacgcccaa 587
            ||| |||||| |||| || |||||||||||||||
Sbjct: 3377 gaactaggagaccttggacttggagcacgcccaa 3344



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 664  accagaatttcgtatctcagatacgttggatgcagtatct 703
            ||||||||||| ||||||||| |  |||||||||||||||
Sbjct: 3267 accagaatttcttatctcagagatattggatgcagtatct 3228



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 739  ctttgataagaacagcatattcagcata 766
            ||||||||| ||||||||||||||||||
Sbjct: 3208 ctttgataataacagcatattcagcata 3181
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>dbj|AK060748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F11, full
            insert sequence
          Length = 2479

 Score =  147 bits (74), Expect = 6e-32
 Identities = 179/214 (83%)
 Strand = Plus / Minus

                                                                        
Query: 374  ctcactactgtagaaaccagcagcttgtcaccgacaatctgtcttagccgtctcacaaaa 433
            |||||||||||||||||||  ||||||||||| ||||||||||| ||| |  |||| |  
Sbjct: 2123 ctcactactgtagaaaccaaaagcttgtcaccaacaatctgtctcagctgcttcactagg 2064

                                                                        
Query: 434  tcgggcctgcttatctttctcctcttgaattcttcatagtgtccatggattatgtccatg 493
            || ||||||||||||||||||||||||||||||||||| | |  ||| |  |  ||||||
Sbjct: 2063 tcaggcctgcttatctttctcctcttgaattcttcataatatttatgcaccagatccatg 2004

                                                                        
Query: 494  tcagaacgaggaacttttgtggagatggcagcaaaaagcattgggaggggcatccagggt 553
            || ||||| || ||||| | ||| || ||||||||||||||||  | ||||||||| |||
Sbjct: 2003 tccgaacggggtactttagcggaaatagcagcaaaaagcattgaaaagggcatccaaggt 1944

                                              
Query: 554  gaagtaggaggccttcgagttggagcacgcccaa 587
            ||| |||||| |||| || |||||||||||||||
Sbjct: 1943 gaactaggagaccttggacttggagcacgcccaa 1910



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 664  accagaatttcgtatctcagatacgttggatgcagtatct 703
            ||||||||||| ||||||||| |  |||||||||||||||
Sbjct: 1833 accagaatttcttatctcagagatattggatgcagtatct 1794



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 739  ctttgataagaacagcatattcagcata 766
            ||||||||| ||||||||||||||||||
Sbjct: 1774 ctttgataataacagcatattcagcata 1747
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>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08
             map S15179S, complete sequence
          Length = 166005

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                         
Query: 374   ctcactactgtagaaaccagcagcttgtcaccgacaatctgtcttagccgtctcacaaaa 433
             |||||||||||||||||||  ||||||||||| ||||||||||| ||| |  |||| |  
Sbjct: 96494 ctcactactgtagaaaccaaaagcttgtcaccaacaatctgtctcagctgcttcactagg 96553

                                      
Query: 434   tcgggcctgcttatctttctcctct 458
             || ||||||||||||||||||||||
Sbjct: 96554 tcaggcctgcttatctttctcctct 96578



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                         
Query: 488   tccatgtcagaacgaggaacttttgtggagatggcagcaaaaagcattgggaggggcatc 547
             |||||||| ||||| || ||||| | ||| || ||||||||||||||||  | |||||||
Sbjct: 96699 tccatgtccgaacggggtactttagcggaaatagcagcaaaaagcattgaaaagggcatc 96758

                                                     
Query: 548   cagggtgaagtaggaggccttcgagttggagcacgcccaa 587
             || |||||| |||||| |||| || |||||||||||||||
Sbjct: 96759 caaggtgaactaggagaccttggacttggagcacgcccaa 96798



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 739   ctttgataagaacagcatattcagcata 766
             ||||||||| ||||||||||||||||||
Sbjct: 97786 ctttgataataacagcatattcagcata 97813



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 664   accagaatttcgtatctcagatacgttggatgcagtatct 703
             ||||||||||| ||||||||| |  |||||||||||||||
Sbjct: 97624 accagaatttcttatctcagagatattggatgcagtatct 97663
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                            
Query: 374      ctcactactgtagaaaccagcagcttgtcaccgacaatctgtcttagccgtctcacaaaa 433
                |||||||||||||||||||  ||||||||||| ||||||||||| ||| |  |||| |  
Sbjct: 35698716 ctcactactgtagaaaccaaaagcttgtcaccaacaatctgtctcagctgcttcactagg 35698775

                                         
Query: 434      tcgggcctgcttatctttctcctct 458
                || ||||||||||||||||||||||
Sbjct: 35698776 tcaggcctgcttatctttctcctct 35698800



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                            
Query: 488      tccatgtcagaacgaggaacttttgtggagatggcagcaaaaagcattgggaggggcatc 547
                |||||||| ||||| || ||||| | ||| || ||||||||||||||||  | |||||||
Sbjct: 35698921 tccatgtccgaacggggtactttagcggaaatagcagcaaaaagcattgaaaagggcatc 35698980

                                                        
Query: 548      cagggtgaagtaggaggccttcgagttggagcacgcccaa 587
                || |||||| |||||| |||| || |||||||||||||||
Sbjct: 35698981 caaggtgaactaggagaccttggacttggagcacgcccaa 35699020



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 739      ctttgataagaacagcatattcagcata 766
                ||||||||| ||||||||||||||||||
Sbjct: 35700008 ctttgataataacagcatattcagcata 35700035



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 664      accagaatttcgtatctcagatacgttggatgcagtatct 703
                ||||||||||| ||||||||| |  |||||||||||||||
Sbjct: 35699846 accagaatttcttatctcagagatattggatgcagtatct 35699885
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                            
Query: 374      ctcactactgtagaaaccagcagcttgtcaccgacaatctgtcttagccgtctcacaaaa 433
                |||||||||||||||||||  ||||||||||| ||||||||||| ||| |  |||| |  
Sbjct: 35788789 ctcactactgtagaaaccaaaagcttgtcaccaacaatctgtctcagctgcttcactagg 35788848

                                         
Query: 434      tcgggcctgcttatctttctcctct 458
                || ||||||||||||||||||||||
Sbjct: 35788849 tcaggcctgcttatctttctcctct 35788873



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                            
Query: 488      tccatgtcagaacgaggaacttttgtggagatggcagcaaaaagcattgggaggggcatc 547
                |||||||| ||||| || ||||| | ||| || ||||||||||||||||  | |||||||
Sbjct: 35788994 tccatgtccgaacggggtactttagcggaaatagcagcaaaaagcattgaaaagggcatc 35789053

                                                        
Query: 548      cagggtgaagtaggaggccttcgagttggagcacgcccaa 587
                || |||||| |||||| |||| || |||||||||||||||
Sbjct: 35789054 caaggtgaactaggagaccttggacttggagcacgcccaa 35789093



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 739      ctttgataagaacagcatattcagcata 766
                ||||||||| ||||||||||||||||||
Sbjct: 35790081 ctttgataataacagcatattcagcata 35790108



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 664      accagaatttcgtatctcagatacgttggatgcagtatct 703
                ||||||||||| ||||||||| |  |||||||||||||||
Sbjct: 35789919 accagaatttcttatctcagagatattggatgcagtatct 35789958
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>dbj|AB089269.1| Triticum aestivum D31 mRNA for fructan exohydrolase, complete cds
          Length = 2319

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 379  tactgtagaaaccagcagcttgtcaccgacaatctgtcttagccgtctca 428
            |||||||||||||||||||||||| || || |||| |||| || ||||||
Sbjct: 2247 tactgtagaaaccagcagcttgtcgccaacgatctttcttggctgtctca 2296
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>ref|XM_470455.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3584

 Score = 48.1 bits (24), Expect = 0.043
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 664  accagaatttcgtatctcagatacgttggatgcagtatct 703
            ||||||||||| ||||||||| |  |||||||||||||||
Sbjct: 3155 accagaatttcttatctcagagatattggatgcagtatct 3116



 Score = 48.1 bits (24), Expect = 0.043
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 739  ctttgataagaacagcatattcagcata 766
            ||||||||| ||||||||||||||||||
Sbjct: 3096 ctttgataataacagcatattcagcata 3069
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>gb|AC147990.3| Mus musculus BAC clone RP24-396B13 from chromosome 17, complete
             sequence
          Length = 145085

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 600   gttgtttatcagctggagatgc 621
             ||||||||||||||||||||||
Sbjct: 60413 gttgtttatcagctggagatgc 60392
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>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence
          Length = 194372

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 600  gttgtttatcagctggagatgc 621
            ||||||||||||||||||||||
Sbjct: 6835 gttgtttatcagctggagatgc 6814
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>emb|BX248586.1| Blochmannia floridanus complete genome; segment 3/3
          Length = 188557

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 676   tatctcagatacgttggatgcagtat 701
             ||||||||||| ||||||||||||||
Sbjct: 53349 tatctcagataagttggatgcagtat 53324
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>gb|AC107752.8| Mus musculus chromosome 10, clone RP23-244J13, complete sequence
          Length = 208458

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 600    gttgtttatcagctggagatg 620
              |||||||||||||||||||||
Sbjct: 169615 gttgtttatcagctggagatg 169595
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>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
             sequence
          Length = 191358

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 445   tatctttctcctcttgaattc 465
             |||||||||||||||||||||
Sbjct: 23229 tatctttctcctcttgaattc 23249
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>gb|AC127303.3| Mus musculus BAC clone RP23-280E20 from chromosome X, complete sequence
          Length = 212318

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 600   gttgtttatcagctggagatg 620
             |||||||||||||||||||||
Sbjct: 88782 gttgtttatcagctggagatg 88802
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>gb|AC100708.10| Mus musculus chromosome 10, clone RP23-169I18, complete sequence
          Length = 196776

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 129  gaaccaaacaaagctacacca 149
            |||||||||||||||||||||
Sbjct: 8458 gaaccaaacaaagctacacca 8438
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>gb|AC114407.24| Mus musculus chromosome 10, clone RP23-51G1, complete sequence
          Length = 143388

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 600   gttgtttatcagctggagatg 620
             |||||||||||||||||||||
Sbjct: 46068 gttgtttatcagctggagatg 46048
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>gb|AC108724.4| Homo sapiens 3 BAC RP11-413E6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 186773

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   gtccttgtgctctccgtctcc 244
             |||||||||||||||||||||
Sbjct: 61158 gtccttgtgctctccgtctcc 61178
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>gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, complete sequence
          Length = 191144

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 224    gtccttgtgctctccgtctcc 244
              |||||||||||||||||||||
Sbjct: 142645 gtccttgtgctctccgtctcc 142665
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>emb|AL590616.23| Mouse DNA sequence from clone RP23-231P12 on chromosome 13 Contains the
              gene for prolactin-like protein L and the Prlpa gene for
              prolactin-like protein A, complete sequence
          Length = 202629

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 600    gttgtttatcagctggagatg 620
              |||||||||||||||||||||
Sbjct: 143056 gttgtttatcagctggagatg 143036
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>gb|AC163294.2| Mus musculus BAC clone RP23-187J1 from chromosome 9, complete sequence
          Length = 203706

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 600   gttgtttatcagctggagatg 620
             |||||||||||||||||||||
Sbjct: 69773 gttgtttatcagctggagatg 69793
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>gb|AC158998.2| Mus musculus BAC clone RP24-290P19 from chromosome 9, complete sequence
          Length = 173036

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 600   gttgtttatcagctggagatg 620
             |||||||||||||||||||||
Sbjct: 24161 gttgtttatcagctggagatg 24141
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>gb|AC132265.4| Mus musculus BAC clone RP24-373J20 from chromosome 10, complete
             sequence
          Length = 178780

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 129   gaaccaaacaaagctacacca 149
             |||||||||||||||||||||
Sbjct: 53370 gaaccaaacaaagctacacca 53390
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>emb|AL672245.6| Mouse DNA sequence from clone RP23-43K8 on chromosome X, complete
              sequence
          Length = 235666

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 600    gttgtttatcagctggagatg 620
              |||||||||||||||||||||
Sbjct: 216306 gttgtttatcagctggagatg 216326
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>emb|AL592170.21| Human DNA sequence from clone RP11-298A19 on chromosome 22, complete
             sequence
          Length = 186861

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 224   gtccttgtgctctccgtctcc 244
             |||||||||||||||||||||
Sbjct: 61370 gtccttgtgctctccgtctcc 61390
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>gb|AY109834.1| Zea mays CL7866_1 mRNA sequence
          Length = 1353

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 453 tcctcttgaattcttcatagt 473
           |||||||||||||||||||||
Sbjct: 444 tcctcttgaattcttcatagt 464
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>emb|BX072557.8| Mouse DNA sequence from clone RP23-79L4 on chromosome X, complete
            sequence
          Length = 198694

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 600  gttgtttatcagctggagatg 620
            |||||||||||||||||||||
Sbjct: 1104 gttgtttatcagctggagatg 1124
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>emb|AL929532.12| Mouse DNA sequence from clone RP23-138C21 on chromosome 4, complete
              sequence
          Length = 133386

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 600    gttgtttatcagctggagatg 620
              |||||||||||||||||||||
Sbjct: 121110 gttgtttatcagctggagatg 121130
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>emb|AL683827.6| Mouse DNA sequence from clone RP23-473F3 on chromosome X, complete
              sequence
          Length = 181878

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 600    gttgtttatcagctggagatg 620
              |||||||||||||||||||||
Sbjct: 180982 gttgtttatcagctggagatg 181002


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,277,828
Number of Sequences: 3902068
Number of extensions: 6277828
Number of successful extensions: 119804
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119689
Number of HSP's gapped (non-prelim): 109
length of query: 767
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 744
effective length of database: 17,143,297,704
effective search space: 12754613491776
effective search space used: 12754613491776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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