>NXL1_LATSE (P01379) Long neurotoxin 1 precursor (Neurotoxin alpha) (Component|
           LSIII)
          Length = 87

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 115 TNRCARNTHFWQICTLKPSYIYTKAWCGSW 204
           T  C  N H  Q C       Y K+WC +W
Sbjct: 21  TRECYLNPHDTQTCPSGQEICYVKSWCNAW 50

>VSN1_NOCAE (P50186) NaeI very-short-patch-repair endonuclease (EC 3.1.-.-)|
           (V.NaeI)
          Length = 166

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -2

Query: 172 RKVLVYIFARNGYFWHTCWFHG*WVEGVNSVPEWWWNFXISR 47
           RKV V+I   +G FWH C  HG       +  EW+W+  + R
Sbjct: 80  RKVAVFI---DGCFWHVCPDHG----RQPTTNEWYWSPKLRR 114

>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
           (Trithorax homolog 2)
          Length = 2715

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +2

Query: 59  EVPPPLRHTIYTFNPSPMEPTGVPEIPISGKYVH*NLPIYTRRRGVDR 202
           EV P LR  I T  P P EP  VP  P +       +P+  +RR + R
Sbjct: 558 EVSPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILR 605

>ALPS_TACTR (P07087) Anti-lipopolysaccharide factor (anti-LPS)|
          Length = 102

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 184 KAWCGSWRDITSKASKSS 237
           K WC SW  IT +A+KSS
Sbjct: 50  KFWCPSWTSITGRATKSS 67

>ALPS_LIMPO (P07086) Anti-lipopolysaccharide factor (anti-LPS) (LALF)|
          Length = 101

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +1

Query: 184 KAWCGSWRDITSKASKSS 237
           K WC SW  IT +A+KSS
Sbjct: 49  KFWCPSWTSITGRATKSS 66

>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)|
           (EBNA-2)
          Length = 487

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 29  LTHRSSATDXEVPPPLRHTI-YTFNPSPMEPTGVP 130
           LTH+S+  D + P P   T+ Y   P P+ P+ +P
Sbjct: 262 LTHQSTPNDPDSPEPRSPTVFYNIPPMPLPPSQLP 296

>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)|
           (EBNA-2) (EBNA2)
          Length = 451

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 29  LTHRSSATDXEVPPPLRHTI-YTFNPSPMEPTGVP 130
           LTH+S+  D + P P   T+ Y   P P+ P+ +P
Sbjct: 228 LTHQSTPNDPDSPEPRSPTVFYNIPPMPLPPSQLP 262

>VGLC_MEHVH (P18535) Glycoprotein A precursor (A antigen)|
          Length = 489

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 80  HTIYTFNPSPMEPTGVP--EIPIS 145
           H I TFNPSP+   GVP  E+P S
Sbjct: 40  HHILTFNPSPISADGVPLSEVPNS 63

>VGLC_MEHVF (P13374) Glycoprotein A precursor (A antigen)|
          Length = 373

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = +2

Query: 80  HTIYTFNPSPMEPTGVP--EIPIS 145
           H I TFNPSP+   GVP  E+P S
Sbjct: 39  HHILTFNPSPISADGVPLSEVPNS 62

>TRPC2_MOUSE (Q9R244) Short transient receptor potential channel 2 (TrpC2)|
           (mTrp2)
          Length = 1172

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -2

Query: 208 LSTIHTTPSCIYRKVLVYIFARNGYFWHTCWFHG*WVEGVNSVPEWWWNF 59
           LST       ++   L  I+   G+ W  C     W+EG+ S    WWNF
Sbjct: 690 LSTFKGRSQSVWETSLHMIWV-TGFLWFEC--KEVWIEGLRSYLLDWWNF 736

>TRPC2_RAT (Q9R283) Short transient receptor potential channel 2 (TrpC2)|
           (rTRP2)
          Length = 885

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -2

Query: 208 LSTIHTTPSCIYRKVLVYIFARNGYFWHTCWFHG*WVEGVNSVPEWWWNF 59
           LST       ++   L  I+   G+ W  C     W+EG+ S    WWNF
Sbjct: 406 LSTFKGRSQSVWETSLHMIWV-TGFLWFEC--KEVWIEGLRSYLLDWWNF 452


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,325,256
Number of Sequences: 219361
Number of extensions: 1337842
Number of successful extensions: 2993
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2991
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)