>VSN1_NOCAE (P50186) NaeI very-short-patch-repair endonuclease (EC 3.1.-.-)|
           (V.NaeI)
          Length = 166

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -2

Query: 164 RKVLVYIFARNGYFWHTCWFHG*WVEGVNSVPEWWWNFKISR 39
           RKV V+I   +G FWH C  HG       +  EW+W+ K+ R
Sbjct: 80  RKVAVFI---DGCFWHVCPDHG----RQPTTNEWYWSPKLRR 114

>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
           (Trithorax homolog 2)
          Length = 2715

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = +3

Query: 30  PFKSTDFEVPPPLRHTIYTFNPSPMEPTGVPEIPISGKYVH*NLPIYTRRRGVDR 194
           P K    EV P LR  I T  P P EP  VP  P +       +P+  +RR + R
Sbjct: 551 PPKPPKVEVSPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILR 605

>NXL1_LATSE (P01379) Long neurotoxin 1 precursor (Neurotoxin alpha) (Component|
           LSIII)
          Length = 87

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +2

Query: 107 TNRCARNTHFWQICTLKPSYIYTKAWCGSW 196
           T  C  N H  Q C       Y K+WC +W
Sbjct: 21  TRECYLNPHDTQTCPSGQEICYVKSWCNAW 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,015,112
Number of Sequences: 219361
Number of extensions: 1821945
Number of successful extensions: 4336
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4336
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)